iPE::Sequence::Repeat(3)

NAME
iPE::Sequence::Repeat - Repeat sequence class for iPE.

DESCRIPTION
The functionality of this class is described in the superclass iPE::Sequence.

The sequence characters represent the following:

 0 - plus strand SINE
 1 - plus strand LINE
 2 - other plus strand interspersed repeat
 3 - no repeat
 4 - other minus strand interspersed repeat
 5 - minus strand LINE
 6 - minus strand SINE

Note that this is symmetric, making complementation easier.

SEE ALSO
iPE::Sequence

AUTHOR
Bob Zimmermann (rpz@cse.wustl.edu)