iPE::Sequence::Malign(3)

NAME
iPE::Sequence::Malign - Alignment sequence class for iPE.

DESCRIPTION

FUNCTIONS

seqRef (), rcRef ()
    These functions are NOT present in the alignment sequence object, and should not be called.

seqNames (), numSeqs ()
    seqNames () returns the names of the sequences in the alignment. These are defined when the sequenceReader is instantiated. numSeqs is equivalent to the number of elements in the array reference returned by seqNames ().

SEE ALSO
iPE::Sequence

AUTHOR
Bob Zimmermann (rpz@cse.wustl.edu) (With much acknowledgement to Sam Gross's code).