!_TAG_FILE_FORMAT	2	/extended format; --format=1 will not append ;" to lines/
!_TAG_FILE_SORTED	1	/0=unsorted, 1=sorted, 2=foldcase/
!_TAG_PROGRAM_AUTHOR	Darren Hiebert	/dhiebert@users.sourceforge.net/
!_TAG_PROGRAM_NAME	Exuberant Ctags	//
!_TAG_PROGRAM_URL	http://ctags.sourceforge.net	/official site/
!_TAG_PROGRAM_VERSION	5.8	//
1	src/contrib/fun3d/comp/
1	src/contrib/fun3d/comp/user.F	/^     1                               w0,ei0,et0,h0,pt0
2	bin/matlab/classes/PetscDM.m.html	/^<\/pre><h2>Temporary hack to fill info in the original DM,this should go to<a name="2"><\/a><\/h2><h2>some DM function and not VecGetArray<a name="3"><\/a><\/h2><pre class="codeinput">         obj = obj.SetInfo();$/;"	a
2	bin/matlab/classes/examples/tutorials/MSA_BoundaryConditions.m.html	/^<\/pre><h2>Sets the boundary conditions for the minimum surface area problem<a name="2"><\/a><\/h2><pre class="codeinput">maxits = 5;$/;"	a
2	bin/matlab/classes/examples/tutorials/MSA_InitialGuess.m.html	/^<\/pre><h2>Get the n-dimensional array, actually its the same petsvec object with<a name="2"><\/a><\/h2><h2>VecFromDM flag set to 1 if not set initially.<a name="3"><\/a><\/h2><pre class="codeinput">x1 = user.dm.VecGetArray(x);$/;"	a
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4	bin/matlab/classes/examples/tutorials/MSA_InitialGuess.m.html	/^<\/pre><h2>The initial guess is the average of the boundary conditions<a name="4"><\/a><\/h2><pre class="codeinput">mx = user.mx; my = user.my;$/;"	a
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4	bin/matlab/classes/examples/tutorials/exSNES_DVI2.m.html	/^<\/pre><h2>Data for the plate<a name="4"><\/a><\/h2><pre class="codeinput">user.bmx = user.mx\/2; user.bmy = user.my\/2;user.bheight=0.4;$/;"	a
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ACTIONBEGIN	include/petsc-private/logimpl.h	14;"	d
ACTIONEND	include/petsc-private/logimpl.h	15;"	d
ADDAIdx	include/petscdmadda.h	/^typedef struct _ADDAIdx_s ADDAIdx;$/;"	t	typeref:struct:_ADDAIdx_s
ADD_ALL_VALUES	include/petscsys.h	/^ typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES, INSERT_BC_VALUES, ADD_BC_VALUES} InsertMode;$/;"	e	enum:__anon31
ADD_BC_VALUES	include/petscsys.h	/^ typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES, INSERT_BC_VALUES, ADD_BC_VALUES} InsertMode;$/;"	e	enum:__anon31
ADD_VALUES	include/petscsys.h	/^ typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES, INSERT_BC_VALUES, ADD_BC_VALUES} InsertMode;$/;"	e	enum:__anon31
ALE	include/petscdmmesh_formats.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/ALE_args.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/ALE_containers.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/ALE_exception.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/ALE_log.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/ALE_mem.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/BasicCommunication.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/CartesianSieve.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/Completion.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/DMBuilder.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/Distribution.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/FEMProblem.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/Field.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/Generator.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/IField.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/INumbering.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/ISieve.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/LabelSifter.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/Mesh.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/Numbering.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/Ordering.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/ParallelMapping.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/Partitioner.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/SectionCompletion.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/Sections.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/Selection.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/Sieve.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/SieveAlgorithms.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/SieveBuilder.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/Sifter.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/Topology.hh	/^namespace ALE {$/;"	n
ALE	include/sieve/UFCProblem.hh	/^namespace ALE {$/;"	n
ALE	src/dm/impls/mesh/ALE.cxx	/^namespace ALE {$/;"	n	file:
ALE	src/dm/impls/mesh/examples/tests/meshTest.hh	/^namespace ALE {$/;"	n
ALE	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^namespace ALE {$/;"	n
ALE	src/dm/impls/mesh/examples/tests/sectionTest.hh	/^namespace ALE {$/;"	n
ALE	src/dm/impls/mesh/examples/tests/sieveTest.hh	/^namespace ALE {$/;"	n
ALE	src/dm/impls/mesh/examples/tests/unitTests.hh	/^namespace ALE {$/;"	n
ALE	src/dm/impls/mesh/examples/tests/xsieveTest.hh	/^namespace ALE {$/;"	n
ALE	src/dm/impls/mesh/examples/tutorials/Coarsener.h	/^namespace ALE {$/;"	n
ALE	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^namespace ALE {$/;"	n
ALE	src/dm/impls/mesh/examples/tutorials/ex_interpolate_1.c	/^using namespace ALE;$/;"	v
ALE	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^namespace ALE {$/;"	n
ALE	src/dm/impls/mesh/examples/tutorials/id_bound.h	/^namespace ALE {$/;"	n
ALE_ALE_cxx	src/dm/impls/mesh/ALE.cxx	174;"	d	file:
ALE_ALE_cxx	src/dm/impls/mesh/ALE.cxx	1;"	d	file:
ALE_ALLOCATOR	include/sieve/ALE_mem.hh	589;"	d
ALE_ALLOCATOR	include/sieve/ALE_mem.hh	592;"	d
ALE_ALLOCATOR	include/sieve/ALE_mem.hh	594;"	d
ALE_HAVE_CXX_ABI	src/dm/impls/mesh/examples/tests/distributionTests.cxx	3;"	d	file:
ALE_HAVE_CXX_ABI	src/dm/impls/mesh/examples/tests/memoryTests.cxx	3;"	d	file:
ALE_LOG_EVENT_BEGIN	include/sieve/ALE_log.hh	69;"	d
ALE_LOG_EVENT_END	include/sieve/ALE_log.hh	75;"	d
ALE_LOG_STAGE_BEGIN	include/sieve/ALE_log.hh	55;"	d
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ALE_MEM_LOGGING	src/dm/impls/mesh/examples/tests/sifter1.cxx	1;"	d	file:
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ALE_MEM_LOGGING	src/dm/impls/mesh/examples/tests/unitTests.cxx	1;"	d	file:
AMS	include/web/AMSSnoopObjects.py	/^import AMS$/;"	i
AMS	include/web/AMSSnoopStack.py	/^import AMS$/;"	i
AMSJavascript	include/web/AMSOptions.py	/^import AMSJavascript$/;"	i
AMSJavascript	include/web/AMSOptions.py	/^import AMSJavascript.AMS_Comm as AMS_Comm$/;"	i
AMSJavascript	include/web/AMSOptions.py	/^import AMSJavascript.AMS_Memory as AMS_Memory$/;"	i
AMSJavascriptExample	include/web/AMSOptions.py	/^class AMSJavascriptExample:$/;"	c
AMSSnoopObjects	include/web/AMSSnoopObjects.py	/^class AMSSnoopObjects:$/;"	c
AMSSnoopStack	include/web/AMSSnoopStack.py	/^class AMSSnoopStack:$/;"	c
AMS_Comm	include/web/AMS.py	/^class AMS_Comm(JSONProxy):$/;"	c
AMS_Comm	include/web/AMSOptions.py	/^import AMSJavascript.AMS_Comm as AMS_Comm$/;"	i
AMS_Memory	include/web/AMS.py	/^class AMS_Memory(JSONProxy):$/;"	c
AMS_Memory	include/web/AMSOptions.py	/^import AMSJavascript.AMS_Memory as AMS_Memory$/;"	i
ANL	config/BuildSystem/build/templates/usingSIDL.py	/^      import ANL.SIDL.ClassFinder$/;"	i
AO	include/finclude/petscaodef.h	10;"	d
AO	include/petscao.h	/^typedef struct _p_AO* AO;$/;"	t	typeref:struct:_p_AO
AOADVANCED	include/petscao.h	31;"	d
AOBASIC	include/petscao.h	30;"	d
AOData2dGrid	include/finclude/petscaodef.h	12;"	d
AOList	include/petscao.h	/^PETSC_EXTERN PetscFunctionList AOList;$/;"	v
AOMAPPING	include/petscao.h	32;"	d
AOMEMORYSCALABLE	include/petscao.h	33;"	d
AORegisterAllCalled	include/petscao.h	/^PETSC_EXTERN PetscBool         AORegisterAllCalled;$/;"	v
AOType	include/finclude/petscaodef.h	11;"	d
AOType	include/petscao.h	/^typedef const char* AOType;$/;"	t
AO_CLASSID	include/petscao.h	/^PETSC_EXTERN PetscClassId AO_CLASSID;$/;"	v
ASE	config/BuildSystem/regression/testCase.py	/^      import ASE.Args$/;"	i
ASE	config/BuildSystem/regression/testCase.py	/^      import ASE.Loader$/;"	i
ASifter	include/sieve/Sifter.hh	/^    ASifter(MPI_Comm comm = PETSC_COMM_SELF, const int& debug = 0) : _debug(debug), _petscObj(NULL) {$/;"	f	class:ALE::ASifter
ASifter	include/sieve/Sifter.hh	/^  class ASifter { \/\/ class ASifter$/;"	c	namespace:ALE
Action	include/petsc-private/logimpl.h	/^} Action;$/;"	t	typeref:struct:_Action
AdditiveBinaryFusion	include/sieve/ParallelMapping.hh	/^    class AdditiveBinaryFusion {$/;"	c	namespace:ALE::Pullback
AdjVisitor	include/petscdmmesh.hh	/^  AdjVisitor(Atlas& atlas, ALE::Mesh<PetscInt,PetscScalar>::sieve_type& adjGraph) : atlas(atlas), adjGraph(adjGraph) {};$/;"	f	class:AdjVisitor
AdjVisitor	include/petscdmmesh.hh	/^class AdjVisitor {$/;"	c
AdjVisitor	include/sieve/Partitioner.hh	/^      AdjVisitor(int adj[], const bool zeroBase) : adjacency(adj), cellOffset(zeroBase ? 0 : 1), offset(0) {};$/;"	f	class:ALE::Partitioner::AdjVisitor
AdjVisitor	include/sieve/Partitioner.hh	/^    class AdjVisitor {$/;"	c	class:ALE::Partitioner
Alloc	include/sieve/ALE_mem.hh	/^    typedef typename std::allocator<T> Alloc;$/;"	t	class:ALE::polymorphic_allocator
Allocator	include/sieve/ALE_mem.hh	/^    typedef A                                               Allocator;$/;"	t	class:ALE::Obj
Allocator_int	include/sieve/ALE_mem.hh	/^    typedef typename Allocator::template rebind<int>::other Allocator_int;$/;"	t	class:ALE::Obj
AnyArg	include/sieve/ALE_args.hh	/^  struct AnyArg {$/;"	s	namespace:ALE
AppCtx	src/dm/impls/mesh/examples/tests/ex1.c	/^} AppCtx;$/;"	t	typeref:struct:__anon16	file:
AppCtx	src/dm/impls/mesh/examples/tests/ex2.c	/^} AppCtx;$/;"	t	typeref:struct:__anon17	file:
AppCtx	src/dm/impls/mesh/examples/tests/ex3.c	/^} AppCtx;$/;"	t	typeref:struct:__anon15	file:
AppCtx	src/dm/impls/moab/examples/tests/ex1.cxx	/^  AppCtx()$/;"	f	class:AppCtx
AppCtx	src/dm/impls/moab/examples/tests/ex1.cxx	/^class AppCtx {$/;"	c	file:
AppCtx	src/dm/impls/plex/examples/tests/ex1.c	/^} AppCtx;$/;"	t	typeref:struct:__anon4	file:
AppCtx	src/dm/impls/plex/examples/tests/ex3.c	/^} AppCtx;$/;"	t	typeref:struct:__anon3	file:
AppCtx	src/dm/impls/plex/examples/tests/ex4.c	/^} AppCtx;$/;"	t	typeref:struct:__anon6	file:
AppCtx	src/dm/impls/plex/examples/tests/ex5.c	/^} AppCtx;$/;"	t	typeref:struct:__anon5	file:
AppCtx	src/dm/impls/plex/examples/tests/ex6.c	/^} AppCtx;$/;"	t	typeref:struct:__anon2	file:
AppCtx	src/dm/impls/plex/examples/tests/ex7.c	/^} AppCtx;$/;"	t	typeref:struct:__anon1	file:
ApplyMatrix_Partial	src/dm/impls/mesh/examples/tests/operator1.cxx	/^PetscErrorCode ApplyMatrix_Partial(const Obj<ALE::Mesh>& m, const Obj<matrix_section_type>& o, const Obj<ALE::Mesh::real_section_type>& s, const Obj<ALE::Mesh::real_section_type>& t, void *ctx)$/;"	f
ApplyMatrix_Stored	src/dm/impls/mesh/examples/tests/operator1.cxx	/^PetscErrorCode ApplyMatrix_Stored(const Obj<ALE::Mesh>& m, const Obj<ALE::Mesh::real_section_type>& o, const Obj<ALE::Mesh::real_section_type>& s, const Obj<ALE::Mesh::real_section_type>& t, void *ctx)$/;"	f
Archiver	config/BuildSystem/build/processor.py	/^class Archiver(Linker):$/;"	c
Arg	config/BuildSystem/nargs.py	/^class Arg(object):$/;"	c
Arg	include/sieve/ALE_args.hh	/^    Arg(T* storage = NULL) : _dtor(new ::boost::program_options::typed_value<T>(storage)){};$/;"	f	struct:ALE::Arg
Arg	include/sieve/ALE_args.hh	/^  struct Arg : public AnyArg {$/;"	s	namespace:ALE
ArgBool	config/BuildSystem/nargs.py	/^class ArgBool(Arg):$/;"	c
ArgDB	include/sieve/ALE_args.hh	/^    ArgDB(const ArgDB& argDB, int argc, char **argv) :$/;"	f	class:ALE::ArgDB
ArgDB	include/sieve/ALE_args.hh	/^    ArgDB(const string& name)                        :$/;"	f	class:ALE::ArgDB
ArgDB	include/sieve/ALE_args.hh	/^  class ArgDB : public ::boost::program_options::variables_map {$/;"	c	namespace:ALE
ArgDir	config/BuildSystem/nargs.py	/^class ArgDir(Arg):$/;"	c
ArgDirList	config/BuildSystem/nargs.py	/^class ArgDirList(Arg):$/;"	c
ArgDownload	config/BuildSystem/nargs.py	/^class ArgDownload(Arg):$/;"	c
ArgExecutable	config/BuildSystem/nargs.py	/^class ArgExecutable(Arg):$/;"	c
ArgFuzzyBool	config/BuildSystem/nargs.py	/^class ArgFuzzyBool(Arg):$/;"	c
ArgInt	config/BuildSystem/nargs.py	/^class ArgInt(Arg):$/;"	c
ArgLibrary	config/BuildSystem/nargs.py	/^class ArgLibrary(Arg):$/;"	c
ArgReal	config/BuildSystem/nargs.py	/^class ArgReal(Arg):$/;"	c
ArgString	config/BuildSystem/nargs.py	/^class ArgString(Arg):$/;"	c
ArgValue	include/sieve/ALE_args.hh	/^    ArgValue(const super& val) : super(val) {};$/;"	f	struct:ALE::ArgValue
ArgValue	include/sieve/ALE_args.hh	/^  struct ArgValue : ::boost::program_options::variable_value {$/;"	s	namespace:ALE
Args	config/BuildSystem/regression/testCase.py	/^      import ASE.Args$/;"	i
ArgumentProcessor	config/BuildSystem/args.py	/^class ArgumentProcessor(object):$/;"	c
Arhs	include/petsc-private/tsimpl.h	/^  Mat Arhs;     \/* Right hand side matrix *\/$/;"	m	struct:_p_TS
Array	config/PETSc/FEM.py	/^    from Cxx import Array$/;"	i
Arrow	include/sieve/ALE_containers.hh	/^    Arrow(const Arrow& a) : source(a.source), target(a.target), color(a.color) {};$/;"	f	struct:ALE::Arrow
Arrow	include/sieve/ALE_containers.hh	/^    Arrow(const source_type& s, const target_type& t, const color_type& c) : source(s), target(t), color(c) {};$/;"	f	struct:ALE::Arrow
Arrow	include/sieve/ALE_containers.hh	/^  struct  Arrow { \/\/: public ALE::def::Arrow<Source_, Target_, Color_> {$/;"	s	namespace:ALE
Arrow	include/sieve/LabelSifter.hh	/^      Arrow(const source_type& s, const target_type& t) : source(s), target(t) {};$/;"	f	struct:ALE::NewSifterDef::Arrow
Arrow	include/sieve/LabelSifter.hh	/^    struct  Arrow { \/\/: public ALE::def::Arrow<Source_, Target_, Color_> {$/;"	s	namespace:ALE::NewSifterDef
Arrow	include/sieve/Sifter.hh	/^      Arrow(const source_type& s, const target_type& t, const color_type& c) : source(s), target(t), color(c) {};$/;"	f	struct:ALE::SifterDef::Arrow
Arrow	include/sieve/Sifter.hh	/^    struct  Arrow { \/\/: public ALE::def::Arrow<Source_, Target_, Color_> {$/;"	s	namespace:ALE::SifterDef
ArrowContainer	include/sieve/LabelSifter.hh	/^      ArrowContainer() {};$/;"	f	struct:ALE::NewSifterDef::ArrowContainer
ArrowContainer	include/sieve/LabelSifter.hh	/^      ArrowContainer(const alloc_type& allocator) {this->set = set_type(typename set_type::ctor_args_list(), allocator);};$/;"	f	struct:ALE::NewSifterDef::ArrowContainer
ArrowContainer	include/sieve/LabelSifter.hh	/^    struct ArrowContainer {$/;"	s	namespace:ALE::NewSifterDef
ArrowContainer	include/sieve/Sifter.hh	/^    struct ArrowContainer {};$/;"	s	namespace:ALE::SifterDef
ArrowContainer	include/sieve/Sifter.hh	/^    struct ArrowContainer<Source_, Target_, Color_, multiColor, SupportCompare_> {$/;"	s	namespace:ALE::SifterDef
ArrowContainer	include/sieve/Sifter.hh	/^    struct ArrowContainer<Source_, Target_, Color_, uniColor, SupportCompare_> {$/;"	s	namespace:ALE::SifterDef
ArrowContainer	src/dm/impls/mesh/examples/tests/ex08.cxx	/^typedef ALE::Experimental::SifterDef::ArrowContainer<ArrowSet,ArrowSetPredicateClearer> ArrowContainer;$/;"	t	file:
ArrowContainerTraits	include/sieve/LabelSifter.hh	/^    struct ArrowContainerTraits {$/;"	s	namespace:ALE::NewSifterDef
ArrowContainerTraits	include/sieve/Sifter.hh	/^    struct ArrowContainerTraits {$/;"	s	namespace:ALE::SifterDef
ArrowRetriever	include/sieve/ISieve.hh	/^      ArrowRetriever() : i(0), o(0) {$/;"	f	class:ALE::ISieveVisitor::ArrowRetriever
ArrowRetriever	include/sieve/ISieve.hh	/^      ArrowRetriever(Visitor& v) : i(0), o(0), visitor(&v) {};$/;"	f	class:ALE::ISieveVisitor::ArrowRetriever
ArrowRetriever	include/sieve/ISieve.hh	/^    class ArrowRetriever {$/;"	c	namespace:ALE::ISieveVisitor
ArrowSection	include/sieve/Sections.hh	/^      ArrowSection(const Obj<sieve_type>& sieve, const Obj<section_type>& section) : ParallelObject(MPI_COMM_SELF, sieve->debug()), _sieve(sieve), _section(section), _coneSize(-1), _cone(NULL) {};$/;"	f	class:ALE::New::ArrowSection
ArrowSection	include/sieve/Sections.hh	/^    class ArrowSection : public ALE::ParallelObject {$/;"	c	namespace:ALE::New
ArrowSequence	include/sieve/LabelSifter.hh	/^        ArrowSequence(const ArrowSequence& seq) : _index(seq._index), key(seq.key), subkey(seq.subkey), useSubkey(seq.useSubkey) {};$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
ArrowSequence	include/sieve/LabelSifter.hh	/^        ArrowSequence(typename traits::index_type& index, const key_type& k) :$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
ArrowSequence	include/sieve/LabelSifter.hh	/^        ArrowSequence(typename traits::index_type& index, const key_type& k, const subkey_type& kk) :$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
ArrowSequence	include/sieve/LabelSifter.hh	/^      class ArrowSequence {$/;"	c	struct:ALE::NewSifterDef::ArrowContainerTraits
ArrowSequence	include/sieve/Sifter.hh	/^        ArrowSequence(const ArrowSequence& seq) : _index(seq._index), key(seq.key), subkey(seq.subkey), useSubkey(seq.useSubkey) {};$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
ArrowSequence	include/sieve/Sifter.hh	/^        ArrowSequence(typename traits::index_type& index, const key_type& k) :$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
ArrowSequence	include/sieve/Sifter.hh	/^        ArrowSequence(typename traits::index_type& index, const key_type& k, const subkey_type& kk) :$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
ArrowSequence	include/sieve/Sifter.hh	/^      class ArrowSequence {$/;"	c	struct:ALE::SifterDef::ArrowContainerTraits
ArrowSet	src/dm/impls/mesh/examples/tests/ex08.cxx	/^typedef ALE::Experimental::UniColorArrowSet                                             ArrowSet;$/;"	t	file:
ArrowSetPredicateClearer	src/dm/impls/mesh/examples/tests/ex08.cxx	/^typedef ALE::FilterDef::DummyPredicateSetClearer<ArrowSet>                              ArrowSetPredicateClearer;$/;"	t	file:
ArrowTest	src/dm/impls/mesh/examples/tests/ex00.c	/^PetscErrorCode ArrowTest()$/;"	f
Arrow_	include/sieve/Sifter.hh	/^    typedef typename traits::arrow_type                                             Arrow_;$/;"	t	class:ALE::Sifter
AssembleMatrix_Full	src/dm/impls/mesh/examples/tests/operator1.cxx	/^PetscErrorCode AssembleMatrix_Full(const Obj<ALE::Mesh>& m, const Obj<ALE::Mesh::real_section_type>& s, Mat A, void *ctx)$/;"	f
AssembleMatrix_None	src/dm/impls/mesh/examples/tests/operator1.cxx	/^PetscErrorCode AssembleMatrix_None(const Obj<ALE::Mesh>& m, const Obj<ALE::Mesh::real_section_type>& s, const Obj<ALE::Mesh::real_section_type>& t, void *ctx)$/;"	f
AssembleMatrix_Partial	src/dm/impls/mesh/examples/tests/operator1.cxx	/^PetscErrorCode AssembleMatrix_Partial(const Obj<ALE::Mesh>& m, const Obj<ALE::Mesh::real_section_type>& s, const Obj<matrix_section_type>& o, void *ctx)$/;"	f
AssembleMatrix_Stored	src/dm/impls/mesh/examples/tests/operator1.cxx	/^PetscErrorCode AssembleMatrix_Stored(const Obj<ALE::Mesh>& m, const Obj<ALE::Mesh::real_section_type>& s, const Obj<ALE::Mesh::real_section_type>& o, void *ctx)$/;"	f
Assemble_Mat_UFC	include/sieve/UFC.hh	/^PetscErrorCode Assemble_Mat_UFC(Mesh mesh, SectionReal section, Mat A, ufc::form * form) {$/;"	f
Assemble_RHS_UFC	include/sieve/UFC.hh	/^PetscErrorCode Assemble_RHS_UFC(Mesh mesh, ufc::form * bform, ufc::form * lform, SectionReal X, SectionReal section, PetscScalar (*exactFunc)(const double *)) {$/;"	f
BCFUNCGetArray	src/dm/impls/mesh/meshpcice.c	/^PetscErrorCode BCFUNCGetArray(DM dm, PetscInt *numElements, PetscInt *fiberDim, PetscScalar *array[])$/;"	f
BCSectionGetArray	src/dm/impls/mesh/meshpcice.c	/^PetscErrorCode BCSectionGetArray(DM dm, const char name[], PetscInt *numElements, PetscInt *fiberDim, PetscInt *array[])$/;"	f
BCSectionRealCreate	src/dm/impls/mesh/meshpcice.c	/^PetscErrorCode BCSectionRealCreate(DM dm, const char name[], PetscInt fiberDim)$/;"	f
BCSectionRealGetArray	src/dm/impls/mesh/meshpcice.c	/^PetscErrorCode BCSectionRealGetArray(DM dm, const char name[], PetscInt *numElements, PetscInt *fiberDim, PetscReal *array[])$/;"	f
BIG_FONT_SIZE	bin/TOPSInstaller.py	/^BIG_FONT_SIZE         = 12$/;"	v
BLASasum_	include/petscblaslapack_c.h	107;"	d
BLASasum_	include/petscblaslapack_c.h	149;"	d
BLASasum_	include/petscblaslapack_c.h	21;"	d
BLASasum_	include/petscblaslapack_c.h	63;"	d
BLASasum_	include/petscblaslapack_caps.h	107;"	d
BLASasum_	include/petscblaslapack_caps.h	149;"	d
BLASasum_	include/petscblaslapack_caps.h	20;"	d
BLASasum_	include/petscblaslapack_caps.h	62;"	d
BLASasum_	include/petscblaslapack_qd.h	19;"	d
BLASasum_	include/petscblaslapack_qd.h	53;"	d
BLASasum_	include/petscblaslapack_stdcall.h	154;"	d
BLASasum_	include/petscblaslapack_stdcall.h	212;"	d
BLASasum_	include/petscblaslapack_stdcall.h	30;"	d
BLASasum_	include/petscblaslapack_stdcall.h	92;"	d
BLASasum_	include/petscblaslapack_uscore.h	104;"	d
BLASasum_	include/petscblaslapack_uscore.h	148;"	d
BLASasum_	include/petscblaslapack_uscore.h	190;"	d
BLASasum_	include/petscblaslapack_uscore.h	20;"	d
BLASasum_	include/petscblaslapack_uscore.h	232;"	d
BLASasum_	include/petscblaslapack_uscore.h	62;"	d
BLASaxpy_	include/petscblaslapack_c.h	106;"	d
BLASaxpy_	include/petscblaslapack_c.h	148;"	d
BLASaxpy_	include/petscblaslapack_c.h	20;"	d
BLASaxpy_	include/petscblaslapack_c.h	62;"	d
BLASaxpy_	include/petscblaslapack_caps.h	106;"	d
BLASaxpy_	include/petscblaslapack_caps.h	148;"	d
BLASaxpy_	include/petscblaslapack_caps.h	19;"	d
BLASaxpy_	include/petscblaslapack_caps.h	61;"	d
BLASaxpy_	include/petscblaslapack_qd.h	18;"	d
BLASaxpy_	include/petscblaslapack_qd.h	52;"	d
BLASaxpy_	include/petscblaslapack_stdcall.h	153;"	d
BLASaxpy_	include/petscblaslapack_stdcall.h	211;"	d
BLASaxpy_	include/petscblaslapack_stdcall.h	29;"	d
BLASaxpy_	include/petscblaslapack_stdcall.h	91;"	d
BLASaxpy_	include/petscblaslapack_uscore.h	103;"	d
BLASaxpy_	include/petscblaslapack_uscore.h	147;"	d
BLASaxpy_	include/petscblaslapack_uscore.h	189;"	d
BLASaxpy_	include/petscblaslapack_uscore.h	19;"	d
BLASaxpy_	include/petscblaslapack_uscore.h	231;"	d
BLASaxpy_	include/petscblaslapack_uscore.h	61;"	d
BLAScopy_	include/petscblaslapack_c.h	104;"	d
BLAScopy_	include/petscblaslapack_c.h	146;"	d
BLAScopy_	include/petscblaslapack_c.h	18;"	d
BLAScopy_	include/petscblaslapack_c.h	60;"	d
BLAScopy_	include/petscblaslapack_caps.h	104;"	d
BLAScopy_	include/petscblaslapack_caps.h	146;"	d
BLAScopy_	include/petscblaslapack_caps.h	17;"	d
BLAScopy_	include/petscblaslapack_caps.h	59;"	d
BLAScopy_	include/petscblaslapack_qd.h	16;"	d
BLAScopy_	include/petscblaslapack_qd.h	50;"	d
BLAScopy_	include/petscblaslapack_stdcall.h	151;"	d
BLAScopy_	include/petscblaslapack_stdcall.h	209;"	d
BLAScopy_	include/petscblaslapack_stdcall.h	27;"	d
BLAScopy_	include/petscblaslapack_stdcall.h	89;"	d
BLAScopy_	include/petscblaslapack_uscore.h	101;"	d
BLAScopy_	include/petscblaslapack_uscore.h	145;"	d
BLAScopy_	include/petscblaslapack_uscore.h	17;"	d
BLAScopy_	include/petscblaslapack_uscore.h	187;"	d
BLAScopy_	include/petscblaslapack_uscore.h	229;"	d
BLAScopy_	include/petscblaslapack_uscore.h	59;"	d
BLASdot_	include/petscblaslapack.h	/^PETSC_STATIC_INLINE PetscScalar BLASdot_(const PetscBLASInt *n,const PetscScalar *x,const PetscBLASInt *sx,const PetscScalar *y,const PetscBLASInt *sy)$/;"	f
BLASdot_	include/petscblaslapack_c.h	14;"	d
BLASdot_	include/petscblaslapack_c.h	56;"	d
BLASdot_	include/petscblaslapack_caps.h	13;"	d
BLASdot_	include/petscblaslapack_caps.h	55;"	d
BLASdot_	include/petscblaslapack_qd.h	12;"	d
BLASdot_	include/petscblaslapack_stdcall.h	23;"	d
BLASdot_	include/petscblaslapack_stdcall.h	85;"	d
BLASdot_	include/petscblaslapack_uscore.h	13;"	d
BLASdot_	include/petscblaslapack_uscore.h	55;"	d
BLASdot_	include/petscblaslapack_uscore.h	97;"	d
BLASdotu_	include/petscblaslapack.h	/^PETSC_STATIC_INLINE PetscScalar BLASdotu_(const PetscBLASInt *n,const PetscScalar *x,const PetscBLASInt *sx,const PetscScalar *y,const PetscBLASInt *sy)$/;"	f
BLASdotu_	include/petscblaslapack_c.h	15;"	d
BLASdotu_	include/petscblaslapack_c.h	57;"	d
BLASdotu_	include/petscblaslapack_caps.h	14;"	d
BLASdotu_	include/petscblaslapack_caps.h	56;"	d
BLASdotu_	include/petscblaslapack_qd.h	13;"	d
BLASdotu_	include/petscblaslapack_stdcall.h	24;"	d
BLASdotu_	include/petscblaslapack_stdcall.h	86;"	d
BLASdotu_	include/petscblaslapack_uscore.h	14;"	d
BLASdotu_	include/petscblaslapack_uscore.h	56;"	d
BLASdotu_	include/petscblaslapack_uscore.h	98;"	d
BLASgemm_	include/petscblaslapack_c.h	119;"	d
BLASgemm_	include/petscblaslapack_c.h	162;"	d
BLASgemm_	include/petscblaslapack_c.h	35;"	d
BLASgemm_	include/petscblaslapack_c.h	77;"	d
BLASgemm_	include/petscblaslapack_caps.h	120;"	d
BLASgemm_	include/petscblaslapack_caps.h	162;"	d
BLASgemm_	include/petscblaslapack_caps.h	40;"	d
BLASgemm_	include/petscblaslapack_caps.h	82;"	d
BLASgemm_	include/petscblaslapack_qd.h	31;"	d
BLASgemm_	include/petscblaslapack_qd.h	62;"	d
BLASgemm_	include/petscblaslapack_stdcall.h	109;"	d
BLASgemm_	include/petscblaslapack_stdcall.h	170;"	d
BLASgemm_	include/petscblaslapack_stdcall.h	228;"	d
BLASgemm_	include/petscblaslapack_stdcall.h	43;"	d
BLASgemm_	include/petscblaslapack_uscore.h	118;"	d
BLASgemm_	include/petscblaslapack_uscore.h	160;"	d
BLASgemm_	include/petscblaslapack_uscore.h	203;"	d
BLASgemm_	include/petscblaslapack_uscore.h	245;"	d
BLASgemm_	include/petscblaslapack_uscore.h	34;"	d
BLASgemm_	include/petscblaslapack_uscore.h	76;"	d
BLASgemv_	include/petscblaslapack_c.h	116;"	d
BLASgemv_	include/petscblaslapack_c.h	159;"	d
BLASgemv_	include/petscblaslapack_c.h	32;"	d
BLASgemv_	include/petscblaslapack_c.h	74;"	d
BLASgemv_	include/petscblaslapack_caps.h	117;"	d
BLASgemv_	include/petscblaslapack_caps.h	159;"	d
BLASgemv_	include/petscblaslapack_caps.h	31;"	d
BLASgemv_	include/petscblaslapack_caps.h	73;"	d
BLASgemv_	include/petscblaslapack_qd.h	28;"	d
BLASgemv_	include/petscblaslapack_qd.h	59;"	d
BLASgemv_	include/petscblaslapack_stdcall.h	105;"	d
BLASgemv_	include/petscblaslapack_stdcall.h	166;"	d
BLASgemv_	include/petscblaslapack_stdcall.h	224;"	d
BLASgemv_	include/petscblaslapack_stdcall.h	49;"	d
BLASgemv_	include/petscblaslapack_uscore.h	115;"	d
BLASgemv_	include/petscblaslapack_uscore.h	157;"	d
BLASgemv_	include/petscblaslapack_uscore.h	200;"	d
BLASgemv_	include/petscblaslapack_uscore.h	242;"	d
BLASgemv_	include/petscblaslapack_uscore.h	31;"	d
BLASgemv_	include/petscblaslapack_uscore.h	73;"	d
BLASnrm2_	include/petscblaslapack_c.h	102;"	d
BLASnrm2_	include/petscblaslapack_c.h	144;"	d
BLASnrm2_	include/petscblaslapack_c.h	16;"	d
BLASnrm2_	include/petscblaslapack_c.h	58;"	d
BLASnrm2_	include/petscblaslapack_caps.h	102;"	d
BLASnrm2_	include/petscblaslapack_caps.h	144;"	d
BLASnrm2_	include/petscblaslapack_caps.h	15;"	d
BLASnrm2_	include/petscblaslapack_caps.h	57;"	d
BLASnrm2_	include/petscblaslapack_qd.h	14;"	d
BLASnrm2_	include/petscblaslapack_qd.h	48;"	d
BLASnrm2_	include/petscblaslapack_stdcall.h	149;"	d
BLASnrm2_	include/petscblaslapack_stdcall.h	207;"	d
BLASnrm2_	include/petscblaslapack_stdcall.h	25;"	d
BLASnrm2_	include/petscblaslapack_stdcall.h	87;"	d
BLASnrm2_	include/petscblaslapack_uscore.h	143;"	d
BLASnrm2_	include/petscblaslapack_uscore.h	15;"	d
BLASnrm2_	include/petscblaslapack_uscore.h	185;"	d
BLASnrm2_	include/petscblaslapack_uscore.h	227;"	d
BLASnrm2_	include/petscblaslapack_uscore.h	57;"	d
BLASnrm2_	include/petscblaslapack_uscore.h	99;"	d
BLASscal_	include/petscblaslapack_c.h	103;"	d
BLASscal_	include/petscblaslapack_c.h	145;"	d
BLASscal_	include/petscblaslapack_c.h	17;"	d
BLASscal_	include/petscblaslapack_c.h	59;"	d
BLASscal_	include/petscblaslapack_caps.h	103;"	d
BLASscal_	include/petscblaslapack_caps.h	145;"	d
BLASscal_	include/petscblaslapack_caps.h	16;"	d
BLASscal_	include/petscblaslapack_caps.h	58;"	d
BLASscal_	include/petscblaslapack_qd.h	15;"	d
BLASscal_	include/petscblaslapack_qd.h	49;"	d
BLASscal_	include/petscblaslapack_stdcall.h	150;"	d
BLASscal_	include/petscblaslapack_stdcall.h	208;"	d
BLASscal_	include/petscblaslapack_stdcall.h	26;"	d
BLASscal_	include/petscblaslapack_stdcall.h	88;"	d
BLASscal_	include/petscblaslapack_uscore.h	100;"	d
BLASscal_	include/petscblaslapack_uscore.h	144;"	d
BLASscal_	include/petscblaslapack_uscore.h	16;"	d
BLASscal_	include/petscblaslapack_uscore.h	186;"	d
BLASscal_	include/petscblaslapack_uscore.h	228;"	d
BLASscal_	include/petscblaslapack_uscore.h	58;"	d
BLASswap_	include/petscblaslapack_c.h	105;"	d
BLASswap_	include/petscblaslapack_c.h	147;"	d
BLASswap_	include/petscblaslapack_c.h	19;"	d
BLASswap_	include/petscblaslapack_c.h	61;"	d
BLASswap_	include/petscblaslapack_caps.h	105;"	d
BLASswap_	include/petscblaslapack_caps.h	147;"	d
BLASswap_	include/petscblaslapack_caps.h	18;"	d
BLASswap_	include/petscblaslapack_caps.h	60;"	d
BLASswap_	include/petscblaslapack_qd.h	17;"	d
BLASswap_	include/petscblaslapack_qd.h	51;"	d
BLASswap_	include/petscblaslapack_stdcall.h	152;"	d
BLASswap_	include/petscblaslapack_stdcall.h	210;"	d
BLASswap_	include/petscblaslapack_stdcall.h	28;"	d
BLASswap_	include/petscblaslapack_stdcall.h	90;"	d
BLASswap_	include/petscblaslapack_uscore.h	102;"	d
BLASswap_	include/petscblaslapack_uscore.h	146;"	d
BLASswap_	include/petscblaslapack_uscore.h	188;"	d
BLASswap_	include/petscblaslapack_uscore.h	18;"	d
BLASswap_	include/petscblaslapack_uscore.h	230;"	d
BLASswap_	include/petscblaslapack_uscore.h	60;"	d
BLAStrmv_	include/petscblaslapack_c.h	118;"	d
BLAStrmv_	include/petscblaslapack_c.h	161;"	d
BLAStrmv_	include/petscblaslapack_c.h	34;"	d
BLAStrmv_	include/petscblaslapack_c.h	76;"	d
BLAStrmv_	include/petscblaslapack_caps.h	119;"	d
BLAStrmv_	include/petscblaslapack_caps.h	161;"	d
BLAStrmv_	include/petscblaslapack_caps.h	33;"	d
BLAStrmv_	include/petscblaslapack_caps.h	75;"	d
BLAStrmv_	include/petscblaslapack_qd.h	30;"	d
BLAStrmv_	include/petscblaslapack_qd.h	61;"	d
BLAStrmv_	include/petscblaslapack_stdcall.h	155;"	d
BLAStrmv_	include/petscblaslapack_stdcall.h	213;"	d
BLAStrmv_	include/petscblaslapack_stdcall.h	31;"	d
BLAStrmv_	include/petscblaslapack_stdcall.h	93;"	d
BLAStrmv_	include/petscblaslapack_uscore.h	117;"	d
BLAStrmv_	include/petscblaslapack_uscore.h	159;"	d
BLAStrmv_	include/petscblaslapack_uscore.h	202;"	d
BLAStrmv_	include/petscblaslapack_uscore.h	244;"	d
BLAStrmv_	include/petscblaslapack_uscore.h	33;"	d
BLAStrmv_	include/petscblaslapack_uscore.h	75;"	d
BLAStrsm_	include/petscblaslapack_c.h	120;"	d
BLAStrsm_	include/petscblaslapack_c.h	163;"	d
BLAStrsm_	include/petscblaslapack_c.h	36;"	d
BLAStrsm_	include/petscblaslapack_c.h	78;"	d
BLAStrsm_	include/petscblaslapack_caps.h	121;"	d
BLAStrsm_	include/petscblaslapack_caps.h	163;"	d
BLAStrsm_	include/petscblaslapack_caps.h	41;"	d
BLAStrsm_	include/petscblaslapack_caps.h	83;"	d
BLAStrsm_	include/petscblaslapack_qd.h	32;"	d
BLAStrsm_	include/petscblaslapack_qd.h	63;"	d
BLAStrsm_	include/petscblaslapack_stdcall.h	111;"	d
BLAStrsm_	include/petscblaslapack_stdcall.h	172;"	d
BLAStrsm_	include/petscblaslapack_stdcall.h	230;"	d
BLAStrsm_	include/petscblaslapack_stdcall.h	45;"	d
BLAStrsm_	include/petscblaslapack_uscore.h	119;"	d
BLAStrsm_	include/petscblaslapack_uscore.h	161;"	d
BLAStrsm_	include/petscblaslapack_uscore.h	204;"	d
BLAStrsm_	include/petscblaslapack_uscore.h	246;"	d
BLAStrsm_	include/petscblaslapack_uscore.h	35;"	d
BLAStrsm_	include/petscblaslapack_uscore.h	77;"	d
BOOST_LIBS	src/dm/impls/mesh/examples/tests/makefile	/^BOOST_LIBS = -Wl,-rpath,${BOOST_DIR}\/lib -L${BOOST_DIR}\/lib -lboost_program_options-gcc41$/;"	m
BS	config/BuildSystem/build/processor.py	/^      import BS.LinkCheckerI.Checker$/;"	i
BS	config/BuildSystem/build/processor.py	/^      import BS.LinkError$/;"	i
BadCast	include/sieve/ALE_mem.hh	/^    BadCast(const BadCast& e)        : Exception(e) {};$/;"	f	class:ALE::BadCast
BadCast	include/sieve/ALE_mem.hh	/^    explicit BadCast(const ostringstream& txt) : Exception(txt) {};$/;"	f	class:ALE::BadCast
BadCast	include/sieve/ALE_mem.hh	/^    explicit BadCast(const string&        msg) : Exception(msg) {};$/;"	f	class:ALE::BadCast
BadCast	include/sieve/ALE_mem.hh	/^  class BadCast : public Exception {$/;"	c	namespace:ALE
Bardhan	include/petscdmmesh_formats.hh	/^  namespace Bardhan {$/;"	n	namespace:ALE
Base	config/BuildSystem/regression/testCase.py	/^      import MPIB.Base$/;"	i
Base	config/BuildSystem/regression/testCase.py	/^      import PETSc.Base$/;"	i
BaseRangeTest	src/dm/impls/mesh/examples/tests/xsieveTest.hh	/^      static PetscErrorCode BaseRangeTest(const ALE::Obj<XSieve_>& xsieve, const ALE::ArgDB& argDB, const char* xsieveName = NULL)$/;"	f	struct:ALE::Test::XSieveTester
BaseSection	include/sieve/Sections.hh	/^    BaseSection(const Obj<sieve_type>& sieve) : ParallelObject(sieve->comm(), sieve->debug()), _sieve(sieve), _chart(*sieve->base()) {_sizes[0] = 1; _sizes[1] = 0;};$/;"	f	class:ALE::BaseSection
BaseSection	include/sieve/Sections.hh	/^  class BaseSection : public ALE::ParallelObject {$/;"	c	namespace:ALE
BaseSectionV	include/sieve/Sections.hh	/^    BaseSectionV(const Obj<sieve_type>& sieve) : ParallelObject(sieve->comm(), sieve->debug()), _sieve(sieve) {_sizes[0] = 1; _sizes[1] = 0;};$/;"	f	class:ALE::BaseSectionV
BaseSectionV	include/sieve/Sections.hh	/^  class BaseSectionV : public ALE::ParallelObject {$/;"	c	namespace:ALE
BaseSet	config/BuildSystem/config/setsBackport.py	/^class BaseSet(object):$/;"	c
BaseSet	config/BuildSystem/config/setsOrdered.py	/^class BaseSet(object):$/;"	c
BaseTest	src/dm/impls/mesh/examples/tests/xsieveTest.hh	/^      static PetscErrorCode BaseTest(const ALE::Obj<XSieve_>& xsieve, ALE::ArgDB argDB, const char* xsieveName = NULL)$/;"	f	struct:ALE::Test::XSieveTester
BasicMake	config/BuildSystem/maker.py	/^class BasicMake(Make):$/;"	c
BasicTest	src/dm/impls/mesh/examples/tests/xsieveTest.hh	/^      static PetscErrorCode BasicTest(const ALE::Obj<XSieve_>& xsieve, const ALE::ArgDB& argDB, const char* xsieveName = NULL)$/;"	f	struct:ALE::Test::XSieveTester
BcastBegin	include/petsc-private/sfimpl.h	/^  PetscErrorCode (*BcastBegin)(PetscSF,MPI_Datatype,const void*,void*);$/;"	m	struct:_PetscSFOps
BcastEnd	include/petsc-private/sfimpl.h	/^  PetscErrorCode (*BcastEnd)(PetscSF,MPI_Datatype,const void*,void*);$/;"	m	struct:_PetscSFOps
BiGraphInt3	src/dm/impls/mesh/examples/tests/ex03.c	/^typedef ALE::Two::BiGraph<int,int,int> BiGraphInt3;$/;"	t	file:
BinaryFusion	include/sieve/ParallelMapping.hh	/^    class BinaryFusion {$/;"	c	namespace:ALE::Pullback
BinaryStratifyVisitor	include/sieve/Mesh.hh	/^      BinaryStratifyVisitor(label_type& h, label_type& d, bool isLeaf) : height(h), depth(d), isLeaf(isLeaf) {};$/;"	f	class:ALE::IBundle::BinaryStratifyVisitor
BinaryStratifyVisitor	include/sieve/Mesh.hh	/^    class BinaryStratifyVisitor {$/;"	c	class:ALE::IBundle
BitKeeper	config/BuildSystem/sourceControl.py	/^class BitKeeper(script.Script, VersionControl):$/;"	c
BoundaryCondition	include/sieve/Mesh.hh	/^    BoundaryCondition(MPI_Comm comm, const int debug = 0) : ParallelObject(comm, debug) {};$/;"	f	class:ALE::BoundaryCondition
BoundaryCondition	include/sieve/Mesh.hh	/^  class BoundaryCondition : public ALE::ParallelObject {$/;"	c	namespace:ALE
BoundaryNodeDimension_2D	src/dm/impls/mesh/examples/tutorials/Coarsener.h	/^int BoundaryNodeDimension_2D(Obj<ALE::Mesh>& mesh, ALE::Mesh::point_type vertex)$/;"	f	namespace:ALE::Coarsener
BoundaryNodeDimension_2D	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^int HierarchyBuilder::BoundaryNodeDimension_2D(point_type vertex)$/;"	f	class:ALE::Hierarchy::HierarchyBuilder
BoundaryNodeDimension_3D	src/dm/impls/mesh/examples/tutorials/Coarsener.h	/^int BoundaryNodeDimension_3D(Obj<ALE::Mesh>& mesh, ALE::Mesh::point_type vertex)$/;"	f	namespace:ALE::Coarsener
BoundaryTest	src/dm/impls/mesh/examples/tests/xsieveTest.hh	/^      static PetscErrorCode BoundaryTest(const ALE::Obj<XSieve_>& xsieve, ALE::ArgDB argDB, const char* xsieveName = NULL)$/;"	f	struct:ALE::Test::XSieveTester
Break	config/PETSc/FEM.py	/^    from Cxx import Break$/;"	i
Break	config/PETSc/FEM.py	/^    from Cxx import Break, CompoundStatement, Function, Pointer, Switch$/;"	i
Brhs	include/petsc-private/tsimpl.h	/^  Mat Brhs;     \/* Right hand side preconditioning matrix *\/$/;"	m	struct:_p_TS
BuildGraph	config/BuildSystem/RDict.py	/^  import build.buildGraph # This is necessary for us to create BuildGraph objects on load$/;"	i
BuildGraph	config/BuildSystem/build/buildGraph.py	/^class BuildGraph(object):$/;"	c
BuildLevels	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^PetscErrorCode HierarchyBuilder::BuildLevels()   \/\/ok we're going to try this: MESH-based coarsening.$/;"	f	class:ALE::Hierarchy::HierarchyBuilder
BuildTopLevel	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^PetscErrorCode HierarchyBuilder::BuildTopLevel()   \/\/does a greedy build of the topmost level of the mesh.$/;"	f	class:ALE::Hierarchy::HierarchyBuilder
Builder	config/BuildSystem/build/builder.py	/^class Builder (base.Base):$/;"	c
Builder	include/petscdmmesh_formats.hh	/^      Builder() {};$/;"	f	class:ALE::PCICE::Builder
Builder	include/petscdmmesh_formats.hh	/^      Builder() {};$/;"	f	class:ALE::PFLOTRAN::Builder
Builder	include/petscdmmesh_formats.hh	/^      Builder() {};$/;"	f	class:ALE::PyLith::Builder
Builder	include/petscdmmesh_formats.hh	/^    class Builder {$/;"	c	namespace:ALE::Bardhan
Builder	include/petscdmmesh_formats.hh	/^    class Builder {$/;"	c	namespace:ALE::Dolfin
Builder	include/petscdmmesh_formats.hh	/^    class Builder {$/;"	c	namespace:ALE::LaGriT
Builder	include/petscdmmesh_formats.hh	/^    class Builder {$/;"	c	namespace:ALE::PCICE
Builder	include/petscdmmesh_formats.hh	/^    class Builder {$/;"	c	namespace:ALE::PFLOTRAN
Builder	include/petscdmmesh_formats.hh	/^    class Builder {$/;"	c	namespace:ALE::PyLith
Bundle	include/sieve/Mesh.hh	/^    Bundle(MPI_Comm comm, int debug = 0) : ALE::ParallelObject(comm, debug), _maxHeight(-1), _maxDepth(-1) {$/;"	f	class:ALE::Bundle
Bundle	include/sieve/Mesh.hh	/^    Bundle(const Obj<sieve_type>& sieve) : ALE::ParallelObject(sieve->comm(), sieve->debug()), _sieve(sieve), _maxHeight(-1), _maxDepth(-1) {$/;"	f	class:ALE::Bundle
Bundle	include/sieve/Mesh.hh	/^  class Bundle : public ALE::ParallelObject {$/;"	c	namespace:ALE
Button	include/web/AMSOptions.py	/^from pyjamas.ui.Button import Button$/;"	i
Button	include/web/AMSSnoopObjects.py	/^from pyjamas.ui.Button import Button$/;"	i
Button	include/web/AMSSnoopStack.py	/^from pyjamas.ui.Button import Button$/;"	i
C	config/BuildSystem/build/templates/usingCxx.py	/^    import build.compile.C$/;"	i
C	config/BuildSystem/build/templates/usingPython.py	/^    import build.compile.C$/;"	i
C	config/BuildSystem/config/compile/CUDA.py	/^import config.compile.C$/;"	i
C	config/BuildSystem/config/compile/FC.py	/^import config.compile.C$/;"	i
CFLAGS	include/finclude/makefile	/^CFLAGS    =$/;"	m
CFLAGS	include/makefile	/^CFLAGS   =$/;"	m
CFLAGS	include/petsc-private/makefile	/^CFLAGS   =$/;"	m
CFLAGS	include/sieve/makefile	/^CFLAGS   =$/;"	m
CFLAGS	interfaces/lua/makefile	/^CFLAGS    =$/;"	m
CFLAGS	interfaces/lua/src/makefile	/^CFLAGS    =$/;"	m
CFLAGS	interfaces/makefile	/^CFLAGS    =$/;"	m
CFLAGS	src/dm/dt/examples/tests/makefile	/^CFLAGS	        =$/;"	m
CFLAGS	src/dm/dt/interface/makefile	/^CFLAGS   =$/;"	m
CFLAGS	src/dm/impls/mesh/examples/tests/makefile	/^CFLAGS	        =$/;"	m
CFLAGS	src/dm/impls/mesh/examples/tutorials/makefile	/^CFLAGS	        =$/;"	m
CFLAGS	src/dm/impls/mesh/f90-custom/makefile	/^CFLAGS   =$/;"	m
CFLAGS	src/dm/impls/mesh/ftn-custom/makefile	/^CFLAGS   =$/;"	m
CFLAGS	src/dm/impls/mesh/makefile	/^CFLAGS   =$/;"	m
CFLAGS	src/dm/impls/moab/examples/tests/makefile	/^CFLAGS	        =$/;"	m
CFLAGS	src/dm/impls/moab/makefile	/^CFLAGS   =$/;"	m
CFLAGS	src/dm/impls/plex/examples/tests/makefile	/^CFLAGS	        =$/;"	m
CFLAGS	src/dm/impls/plex/f90-custom/makefile	/^CFLAGS   =$/;"	m
CFLAGS	src/dm/impls/plex/ftn-custom/makefile	/^CFLAGS   =$/;"	m
CHAR	include/petsc-private/fortranimpl.h	55;"	d
CHARACTERISTICDA	include/petsccharacteristic.h	30;"	d
CHARACTERISTIC_CLASSID	include/petsc-private/characteristicimpl.h	/^PETSC_EXTERN PetscClassId CHARACTERISTIC_CLASSID;$/;"	v
CHARACTERISTIC_DAUpdate	include/petsc-private/characteristicimpl.h	/^PETSC_EXTERN PetscLogEvent CHARACTERISTIC_SetUp, CHARACTERISTIC_Solve, CHARACTERISTIC_QueueSetup, CHARACTERISTIC_DAUpdate;$/;"	v
CHARACTERISTIC_FullTimeExchange	include/petsc-private/characteristicimpl.h	/^PETSC_EXTERN PetscLogEvent CHARACTERISTIC_FullTimeLocal, CHARACTERISTIC_FullTimeRemote, CHARACTERISTIC_FullTimeExchange;$/;"	v
CHARACTERISTIC_FullTimeLocal	include/petsc-private/characteristicimpl.h	/^PETSC_EXTERN PetscLogEvent CHARACTERISTIC_FullTimeLocal, CHARACTERISTIC_FullTimeRemote, CHARACTERISTIC_FullTimeExchange;$/;"	v
CHARACTERISTIC_FullTimeRemote	include/petsc-private/characteristicimpl.h	/^PETSC_EXTERN PetscLogEvent CHARACTERISTIC_FullTimeLocal, CHARACTERISTIC_FullTimeRemote, CHARACTERISTIC_FullTimeExchange;$/;"	v
CHARACTERISTIC_HalfTimeExchange	include/petsc-private/characteristicimpl.h	/^PETSC_EXTERN PetscLogEvent CHARACTERISTIC_HalfTimeLocal, CHARACTERISTIC_HalfTimeRemote, CHARACTERISTIC_HalfTimeExchange;$/;"	v
CHARACTERISTIC_HalfTimeLocal	include/petsc-private/characteristicimpl.h	/^PETSC_EXTERN PetscLogEvent CHARACTERISTIC_HalfTimeLocal, CHARACTERISTIC_HalfTimeRemote, CHARACTERISTIC_HalfTimeExchange;$/;"	v
CHARACTERISTIC_HalfTimeRemote	include/petsc-private/characteristicimpl.h	/^PETSC_EXTERN PetscLogEvent CHARACTERISTIC_HalfTimeLocal, CHARACTERISTIC_HalfTimeRemote, CHARACTERISTIC_HalfTimeExchange;$/;"	v
CHARACTERISTIC_QueueSetup	include/petsc-private/characteristicimpl.h	/^PETSC_EXTERN PetscLogEvent CHARACTERISTIC_SetUp, CHARACTERISTIC_Solve, CHARACTERISTIC_QueueSetup, CHARACTERISTIC_DAUpdate;$/;"	v
CHARACTERISTIC_SetUp	include/petsc-private/characteristicimpl.h	/^PETSC_EXTERN PetscLogEvent CHARACTERISTIC_SetUp, CHARACTERISTIC_Solve, CHARACTERISTIC_QueueSetup, CHARACTERISTIC_DAUpdate;$/;"	v
CHARACTERISTIC_Solve	include/petsc-private/characteristicimpl.h	/^PETSC_EXTERN PetscLogEvent CHARACTERISTIC_SetUp, CHARACTERISTIC_Solve, CHARACTERISTIC_QueueSetup, CHARACTERISTIC_DAUpdate;$/;"	v
CHKERRABORT	include/petscerror.h	249;"	d
CHKERRABORT	include/petscerror.h	329;"	d
CHKERRCONTINUE	include/petscerror.h	250;"	d
CHKERRCONTINUE	include/petscerror.h	330;"	d
CHKERROR	include/sieve/ALE_exception.hh	67;"	d
CHKERRQ	include/finclude/petscsysdef.h	182;"	d
CHKERRQ	include/petscerror.h	246;"	d
CHKERRQ	include/petscerror.h	328;"	d
CHKERRV	include/petscerror.h	248;"	d
CHKERRXX	include/petscerror.h	278;"	d
CHKERRXX	include/petscerror.h	334;"	d
CHKFORTRANNULLDOUBLE	include/petsc-private/fortranimpl.h	100;"	d
CHKFORTRANNULLFUNCTION	include/petsc-private/fortranimpl.h	126;"	d
CHKFORTRANNULLINTEGER	include/petsc-private/fortranimpl.h	88;"	d
CHKFORTRANNULLOBJECT	include/petsc-private/fortranimpl.h	112;"	d
CHKFORTRANNULLOBJECTDEREFERENCE	include/petsc-private/fortranimpl.h	120;"	d
CHKFORTRANNULLREAL	include/petsc-private/fortranimpl.h	106;"	d
CHKFORTRANNULLSCALAR	include/petsc-private/fortranimpl.h	94;"	d
CHKMEMA	include/petscerror.h	309;"	d
CHKMEMQ	include/finclude/petscsysdef.h	183;"	d
CHKMEMQ	include/petscerror.h	307;"	d
CHKMEMQ	include/petscerror.h	331;"	d
CHKMPIERROR	include/sieve/ALE_exception.hh	71;"	d
CODEBOX_FONT_SIZE	bin/TOPSInstaller.py	/^CODEBOX_FONT_SIZE     =  9$/;"	v
CPPFLAGS	interfaces/lua/makefile	/^CPPFLAGS  =$/;"	m
CPPFLAGS	interfaces/lua/src/makefile	/^CPPFLAGS  =$/;"	m
CPPFLAGS	interfaces/makefile	/^CPPFLAGS  =$/;"	m
CPPFLAGS	src/dm/dt/examples/tests/makefile	/^CPPFLAGS        =$/;"	m
CPPFLAGS	src/dm/impls/mesh/examples/tests/makefile	/^CPPFLAGS        =$/;"	m
CPPFLAGS	src/dm/impls/mesh/examples/tutorials/makefile	/^CPPFLAGS        = -I${PETFMM_DIR}\/src -I. -DDIMENSION=${DIM} -DNUM_TERMS=${NUM_TERMS} -DNUM_COEFFICIENTS=${NUM_COEFFICIENTS}$/;"	m
CPPFLAGS	src/dm/impls/mesh/makefile	/^CPPFLAGS =$/;"	m
CPPFLAGS	src/dm/impls/moab/examples/tests/makefile	/^CPPFLAGS        =$/;"	m
CPPFLAGS	src/dm/impls/plex/examples/tests/makefile	/^CPPFLAGS        =$/;"	m
CREATE	include/petsc-private/logimpl.h	12;"	d
C_factor	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^double                               C_factor;$/;"	m	class:ALE::Hierarchy::HierarchyBuilder
C_levels	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^int                                  C_levels;$/;"	m	class:ALE::Hierarchy::HierarchyBuilder
CacheAttribute	config/PETSc/utilities/cacheDetails.py	/^class CacheAttribute(object):$/;"	c
CartesianBundle	include/sieve/CartesianSieve.hh	/^    CartesianBundle(MPI_Comm comm, const int debug = 0) : ALE::ParallelObject(comm, debug), _maxHeight(-1), _maxDepth(-1) {$/;"	f	class:ALE::CartesianBundle
CartesianBundle	include/sieve/CartesianSieve.hh	/^  class CartesianBundle : public ALE::ParallelObject {$/;"	c	namespace:ALE
CartesianMesh	include/sieve/CartesianSieve.hh	/^    CartesianMesh(MPI_Comm comm, int dim, int debug = 0) : CartesianBundle(comm, debug), _dim(dim) {$/;"	f	class:ALE::CartesianMesh
CartesianMesh	include/sieve/CartesianSieve.hh	/^  class CartesianMesh : public CartesianBundle {$/;"	c	namespace:ALE
CartesianMeshBuilder	include/sieve/CartesianSieve.hh	/^  class CartesianMeshBuilder {$/;"	c	namespace:ALE
CartesianSieve	include/sieve/CartesianSieve.hh	/^    CartesianSieve(MPI_Comm comm, const int dim, const int numCells[], const int& debug = 0) : ParallelObject(comm, debug), _dim(dim) {$/;"	f	class:ALE::CartesianSieve
CartesianSieve	include/sieve/CartesianSieve.hh	/^  class CartesianSieve : public ALE::ParallelObject {$/;"	c	namespace:ALE
CartesianSieveDef	include/sieve/CartesianSieve.hh	/^  namespace CartesianSieveDef {$/;"	n	namespace:ALE
Chaco	include/sieve/Partitioner.hh	/^    namespace Chaco {$/;"	n	namespace:ALE::New
Chaco	include/sieve/Partitioner.hh	/^  namespace Chaco {$/;"	n	namespace:ALE
ChangeCoordinates	src/dm/impls/plex/examples/tests/ex8.c	/^PetscErrorCode ChangeCoordinates(DM dm, PetscInt spaceDim, PetscScalar vertexCoords[])$/;"	f
Characteristic	include/petsccharacteristic.h	/^typedef struct _p_Characteristic *Characteristic;$/;"	t	typeref:struct:_p_Characteristic
CharacteristicList	include/petsccharacteristic.h	/^PETSC_EXTERN PetscFunctionList CharacteristicList;$/;"	v
CharacteristicPointDA2D	include/petsc-private/characteristicimpl.h	/^} CharacteristicPointDA2D;$/;"	t	typeref:struct:_p_Item
CharacteristicRegisterAllCalled	include/petsccharacteristic.h	/^PETSC_EXTERN PetscBool         CharacteristicRegisterAllCalled;$/;"	v
CharacteristicType	include/petsccharacteristic.h	/^typedef const char* CharacteristicType;$/;"	t
CheckError	src/dm/impls/mesh/examples/tests/sieveTests.py	/^class CheckError(RuntimeError):$/;"	c
CheckFEMGeometry	src/dm/impls/plex/examples/tests/ex8.c	/^PetscErrorCode CheckFEMGeometry(DM dm, PetscInt cell, PetscInt spaceDim, PetscReal v0Ex[], PetscReal JEx[], PetscReal invJEx[], PetscReal detJEx)$/;"	f
CheckFVMGeometry	src/dm/impls/plex/examples/tests/ex8.c	/^PetscErrorCode CheckFVMGeometry(DM dm, PetscInt cell, PetscInt spaceDim, PetscReal centroidEx[], PetscReal normalEx[], PetscReal volEx)$/;"	f
CheckFunctions	src/dm/impls/plex/examples/tests/ex3.c	/^PetscErrorCode CheckFunctions(DM dm, PetscInt order, Vec u, AppCtx *user)$/;"	f
CheckMesh	src/dm/impls/plex/examples/tests/ex7.c	/^PetscErrorCode CheckMesh(DM dm)$/;"	f
CheckPoints	src/dm/dt/examples/tests/ex1.c	/^static PetscErrorCode CheckPoints(const char *name,PetscInt npoints,const PetscReal *points,PetscInt ndegrees,const PetscInt *degrees)$/;"	f	file:
CheckPreallocation	src/dm/impls/mesh/examples/tests/sieveTests.cxx	/^PetscErrorCode CheckPreallocation(Obj<MeshT>& mesh, Mat A, const Options *options)$/;"	f
Checker	config/BuildSystem/build/processor.py	/^      import BS.LinkCheckerI.Checker$/;"	i
ClassFinder	config/BuildSystem/build/templates/usingSIDL.py	/^      import ANL.SIDL.ClassFinder$/;"	i
Close	config/BuildSystem/build/bk.py	/^class Close (build.transform.Transform):$/;"	c
ClosureTest	src/dm/impls/mesh/examples/tests/mesh2.cxx	/^PetscErrorCode ClosureTest(const Obj<ALE::Mesh>& m, Options *options)$/;"	f
Cmp	include/sieve/ALE_containers.hh	/^    typedef less_than Cmp;$/;"	t	class:ALE::Pair
Cmp	include/sieve/ALE_containers.hh	/^    typedef less_than Cmp;$/;"	t	class:ALE::Point
Cmp	include/sieve/ALE_containers.hh	/^    typedef less_than Cmp;$/;"	t	struct:ALE::MinimalArrow
CoarseProblemType	include/finclude/petscpcdef.h	23;"	d
CoarseProblemType	include/petscpc.h	/^typedef enum {SEQUENTIAL_BDDC,REPLICATED_BDDC,PARALLEL_BDDC,MULTILEVEL_BDDC} CoarseProblemType;$/;"	t	typeref:enum:__anon54
Coarsener	src/dm/impls/mesh/examples/tutorials/Coarsener.h	/^namespace Coarsener {$/;"	n	namespace:ALE
Coarsener	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^namespace Coarsener {$/;"	n	namespace:ALE
Coarsener	src/dm/impls/mesh/examples/tutorials/id_bound.h	/^namespace Coarsener {$/;"	n	namespace:ALE
CodePurpose	config/PETSc/FEM.py	/^    from GenericCompiler import CodePurpose$/;"	i
ColorMultiplicity	include/sieve/Sifter.hh	/^    typedef enum {multiColor, uniColor} ColorMultiplicity;$/;"	t	namespace:ALE::SifterDef	typeref:enum:ALE::SifterDef::__anon1
ColorSetter	include/sieve/Sifter.hh	/^      ColorSetter(const typename traits::color_type& color) : _color(color) {};$/;"	f	struct:ALE::Sifter::ColorSetter
ColorSetter	include/sieve/Sifter.hh	/^    struct ColorSetter {$/;"	s	class:ALE::Sifter
CompareCones	src/dm/impls/plex/examples/tests/ex7.c	/^PetscErrorCode CompareCones(DM dm, DM idm)$/;"	f
CompatibleWithEdge	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^bool CompatibleWithEdge(Obj<ALE::Mesh> mesh, int dim, ALE::Mesh::patch_type ePatch, ALE::Mesh::point_type edge, ALE::Mesh::point_type point, double region)$/;"	f	namespace:ALE::Coarsener
Compile	config/BuildSystem/build/framework.py	/^      import build.templates.Compile$/;"	i
Compiler	config/BuildSystem/build/compile/C.py	/^class Compiler (build.processor.Compiler):$/;"	c
Compiler	config/BuildSystem/build/compile/Cxx.py	/^class Compiler (build.processor.Compiler):$/;"	c
Compiler	config/BuildSystem/build/compile/F90.py	/^class Compiler (build.processor.Compiler):$/;"	c
Compiler	config/BuildSystem/build/compile/SIDL.py	/^class Compiler(build.processor.Processor):$/;"	c
Compiler	config/BuildSystem/build/processor.py	/^class Compiler(Processor):$/;"	c
Compiler	config/BuildSystem/config/compile/C.py	/^class Compiler(config.compile.processor.Processor):$/;"	c
Compiler	config/BuildSystem/config/compile/CUDA.py	/^class Compiler(config.compile.processor.Processor):$/;"	c
Compiler	config/BuildSystem/config/compile/Cxx.py	/^class Compiler(config.compile.processor.Processor):$/;"	c
Compiler	config/BuildSystem/config/compile/FC.py	/^class Compiler(config.compile.processor.Processor):$/;"	c
Compiler	config/BuildSystem/config/compile/SIDL.py	/^class Compiler(script.Script):$/;"	c
CompilerException	config/PETSc/FEM.py	/^    from GenericCompiler import CompilerException$/;"	i
CompilerOptions	config/BuildSystem/config/compilerOptions.py	/^class CompilerOptions(config.base.Configure):$/;"	c
Completion	include/sieve/Completion.hh	/^    class Completion {$/;"	c	namespace:ALE::New
Completion	include/sieve/Completion.hh	/^  class Completion {$/;"	c	namespace:ALE
CompoundStatement	config/PETSc/FEM.py	/^    from Cxx import Break, CompoundStatement, Function, Pointer, Switch$/;"	i
CompoundStatement	config/PETSc/FEM.py	/^    from Cxx import CompoundStatement$/;"	i
ComputeAngles	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^double * ComputeAngles(Obj<ALE::Mesh> mesh, int dim, ALE::Mesh::patch_type patch)$/;"	f	namespace:ALE::Coarsener
ConeSection	include/sieve/Sections.hh	/^      ConeSection(const Obj<sieve_type>& sieve) : ParallelObject(MPI_COMM_SELF, sieve->debug()), _sieve(sieve), _coneSize(-1), _cone(NULL) {};$/;"	f	class:ALE::New::ConeSection
ConeSection	include/sieve/Sections.hh	/^    ConeSection(const Obj<sieve_type>& sieve) : ParallelObject(sieve->comm(), sieve->debug()), _sieve(sieve) {$/;"	f	class:ALE::ConeSection
ConeSection	include/sieve/Sections.hh	/^    class ConeSection : public ALE::ParallelObject {$/;"	c	namespace:ALE::New
ConeSection	include/sieve/Sections.hh	/^  class ConeSection : public ALE::ParallelObject {$/;"	c	namespace:ALE
ConeSectionV	include/sieve/Sections.hh	/^    ConeSectionV(const Obj<sieve_type>& sieve) : ParallelObject(sieve->comm(), sieve->debug()), _sieve(sieve) {$/;"	f	class:ALE::ConeSectionV
ConeSectionV	include/sieve/Sections.hh	/^  class ConeSectionV : public ALE::ParallelObject {$/;"	c	namespace:ALE
ConeSequence	include/sieve/CartesianSieve.hh	/^      ConeSequence(const int dim, const int sizes[], const int numCells, const point_type& cell, const bool addSelf = false) : _dim(dim), _sizes(sizes), _numCells(numCells), _cell(cell), _addSelf(addSelf) {$/;"	f	class:ALE::CartesianSieveDef::ConeSequence
ConeSequence	include/sieve/CartesianSieve.hh	/^    class ConeSequence {$/;"	c	namespace:ALE::CartesianSieveDef
ConeSizeSection	include/sieve/Sections.hh	/^      ConeSizeSection(const Obj<bundle_type>& bundle, const Obj<sieve_type>& sieve, int minimumHeight = 0) : ParallelObject(MPI_COMM_SELF, sieve->debug()), _bundle(bundle), _sieve(sieve), _minHeight(minimumHeight) {$/;"	f	class:ALE::New::ConeSizeSection
ConeSizeSection	include/sieve/Sections.hh	/^    ConeSizeSection(const Obj<sieve_type>& sieve) : ParallelObject(sieve->comm(), sieve->debug()), _sieve(sieve) {$/;"	f	class:ALE::ConeSizeSection
ConeSizeSection	include/sieve/Sections.hh	/^    class ConeSizeSection : public ALE::ParallelObject {$/;"	c	namespace:ALE::New
ConeSizeSection	include/sieve/Sections.hh	/^  class ConeSizeSection : public ALE::ParallelObject {$/;"	c	namespace:ALE
ConeSizeSectionV	include/sieve/Sections.hh	/^    ConeSizeSectionV(const Obj<sieve_type>& sieve) : ParallelObject(sieve->comm(), sieve->debug()), _sieve(sieve) {$/;"	f	class:ALE::ConeSizeSectionV
ConeSizeSectionV	include/sieve/Sections.hh	/^  class ConeSizeSectionV : public ALE::ParallelObject {$/;"	c	namespace:ALE
ConeTest	src/dm/impls/mesh/examples/tests/ex00.c	/^PetscErrorCode ConeTest()$/;"	f
ConeTest	src/dm/impls/mesh/examples/tests/sifter1.cxx	/^PetscErrorCode ConeTest(const ALE::Obj<sifter_type>& sifter, Options *options)$/;"	f
ConeTest	src/dm/impls/mesh/examples/tests/xsieveTest.hh	/^      static PetscErrorCode ConeTest(const ALE::Obj<XSieve_>& xsieve, const ALE::ArgDB& argDB, const char* xsieveName = NULL)$/;"	f	struct:ALE::Test::XSieveTester
ConeVisitor	include/sieve/ISieve.hh	/^      ConeVisitor(const Sieve& s, Visitor& v, bool useSource = false) : sieve(s), visitor(v), useSource(useSource) {};$/;"	f	class:ALE::ISieveVisitor::ConeVisitor
ConeVisitor	include/sieve/ISieve.hh	/^    class ConeVisitor {$/;"	c	namespace:ALE::ISieveVisitor
ConfigReader	bin/configVars.py	/^class ConfigReader(script.Script):$/;"	c
Configure	config/BuildSystem/config/ase.py	/^class Configure(config.base.Configure):$/;"	c
Configure	config/BuildSystem/config/atomics.py	/^class Configure(config.base.Configure):$/;"	c
Configure	config/BuildSystem/config/autoconf.py	/^class Configure(config.base.Configure):$/;"	c
Configure	config/BuildSystem/config/base.py	/^class Configure(script.Script):$/;"	c
Configure	config/BuildSystem/config/compilerFlags.py	/^class Configure(config.base.Configure):$/;"	c
Configure	config/BuildSystem/config/compilers.py	/^class Configure(config.base.Configure):$/;"	c
Configure	config/BuildSystem/config/functions.py	/^class Configure(config.base.Configure):$/;"	c
Configure	config/BuildSystem/config/headers.py	/^class Configure(config.base.Configure):$/;"	c
Configure	config/BuildSystem/config/libraries.py	/^class Configure(config.base.Configure):$/;"	c
Configure	config/BuildSystem/config/packages/BlasLapack.py	/^class Configure(config.package.Package):$/;"	c
Configure	config/BuildSystem/config/packages/CHOLMOD.py	/^class Configure(config.package.Package):$/;"	c
Configure	config/BuildSystem/config/packages/MOAB.py	/^class Configure(config.package.GNUPackage):$/;"	c
Configure	config/BuildSystem/config/packages/MPI.py	/^class Configure(config.package.Package):$/;"	c
Configure	config/BuildSystem/config/packages/PETSc.py	/^class Configure(config.base.Configure):$/;"	c
Configure	config/BuildSystem/config/packages/UMFPACK.py	/^class Configure(config.package.Package):$/;"	c
Configure	config/BuildSystem/config/packages/boost.py	/^class Configure(config.package.Package):$/;"	c
Configure	config/BuildSystem/config/packages/cusp.py	/^class Configure(config.package.Package):$/;"	c
Configure	config/BuildSystem/config/packages/exodusii.py	/^class Configure(config.package.Package):$/;"	c
Configure	config/BuildSystem/config/packages/f2cblaslapack.py	/^class Configure(config.package.Package):$/;"	c
Configure	config/BuildSystem/config/packages/fiat.py	/^class Configure(config.package.Package):$/;"	c
Configure	config/BuildSystem/config/packages/hdf5.py	/^class Configure(config.package.Package):$/;"	c
Configure	config/BuildSystem/config/packages/netcdf-cxx.py	/^class Configure(config.package.GNUPackage):$/;"	c
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Configure	config/PETSc/packages/pARMS.py	/^class Configure(PETSc.package.NewPackage):$/;"	c
Configure	config/PETSc/packages/pami.py	/^class Configure(PETSc.package.NewPackage):$/;"	c
Configure	config/PETSc/packages/papi.py	/^class Configure(PETSc.package.NewPackage):$/;"	c
Configure	config/PETSc/packages/parmetis.py	/^class Configure(PETSc.package.NewPackage):$/;"	c
Configure	config/PETSc/packages/pcbddc.py	/^class Configure(PETSc.package.NewPackage):$/;"	c
Configure	config/PETSc/packages/petsc4py.py	/^class Configure(PETSc.package.NewPackage):$/;"	c
Configure	config/PETSc/packages/pthread.py	/^class Configure(PETSc.package.NewPackage):$/;"	c
Configure	config/PETSc/packages/pthreadclasses.py	/^class Configure(PETSc.package.NewPackage):$/;"	c
Configure	config/PETSc/packages/scalapack.py	/^class Configure(PETSc.package.NewPackage):$/;"	c
Configure	config/PETSc/packages/server.py	/^class Configure(PETSc.package.NewPackage):$/;"	c
Configure	config/PETSc/packages/sowing.py	/^class Configure(PETSc.package.NewPackage):$/;"	c
Configure	config/PETSc/packages/spai.py	/^class Configure(PETSc.package.NewPackage):$/;"	c
Configure	config/PETSc/packages/sprng.py	/^class Configure(PETSc.package.NewPackage):$/;"	c
Configure	config/PETSc/packages/sundials.py	/^class Configure(PETSc.package.NewPackage):$/;"	c
Configure	config/PETSc/packages/tetgen.py	/^class Configure(PETSc.package.NewPackage):$/;"	c
Configure	config/PETSc/packages/threadcomm.py	/^class Configure(PETSc.package.NewPackage):$/;"	c
Configure	config/PETSc/packages/txpetscgpu.py	/^class Configure(config.package.Package):$/;"	c
Configure	config/PETSc/packages/valgrind.py	/^class Configure(PETSc.package.NewPackage):$/;"	c
Configure	config/PETSc/packages/yaml.py	/^class Configure(PETSc.package.NewPackage):$/;"	c
Configure	config/PETSc/petsc.py	/^class Configure(config.base.Configure):$/;"	c
Configure	config/PETSc/utilities/CHUD.py	/^class Configure(config.base.Configure):$/;"	c
Configure	config/PETSc/utilities/Etags.py	/^class Configure(config.base.Configure):$/;"	c
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Configure	config/PETSc/utilities/Regression.py	/^class Configure(config.base.Configure):$/;"	c
Configure	config/PETSc/utilities/arch.py	/^class Configure(config.base.Configure):$/;"	c
Configure	config/PETSc/utilities/bmakeDir.py	/^class Configure(config.base.Configure):$/;"	c
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Configure	config/PETSc/utilities/getResidentSetSize.py	/^class Configure(config.base.Configure):$/;"	c
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Configure	config/PETSc/utilities/memAlign.py	/^class Configure(config.base.Configure):$/;"	c
Configure	config/PETSc/utilities/missing.py	/^class Configure(config.base.Configure):$/;"	c
Configure	config/PETSc/utilities/petscdir.py	/^class Configure(config.base.Configure):$/;"	c
Configure	config/PETSc/utilities/scalarTypes.py	/^class Configure(config.base.Configure):$/;"	c
Configure	config/PETSc/utilities/sharedLibraries.py	/^class Configure(config.base.Configure):$/;"	c
Configure	config/PETSc/utilities/timer.py	/^class Configure(config.base.Configure):$/;"	c
ConfigureSetupError	config/BuildSystem/config/base.py	/^class ConfigureSetupError(Exception):$/;"	c
Consolidator	config/BuildSystem/build/transform.py	/^class Consolidator (Transform):$/;"	c
ConstantSection	include/sieve/Field.hh	/^    ConstantSection(MPI_Comm comm, const int debug = 0) : ParallelObject(comm, debug) {$/;"	f	class:ALE::ConstantSection
ConstantSection	include/sieve/Field.hh	/^    ConstantSection(MPI_Comm comm, const value_type& value, const int debug) : ParallelObject(comm, debug) {$/;"	f	class:ALE::ConstantSection
ConstantSection	include/sieve/Field.hh	/^    ConstantSection(MPI_Comm comm, const value_type& value, const value_type& defaultValue, const int debug) : ParallelObject(comm, debug) {$/;"	f	class:ALE::ConstantSection
ConstantSection	include/sieve/Field.hh	/^  class ConstantSection : public ALE::ParallelObject {$/;"	c	namespace:ALE
ConstantSectionTest	src/dm/impls/mesh/examples/tests/section1-old.cxx	/^PetscErrorCode ConstantSectionTest(const Obj<topology_type>& topology, Options *options)$/;"	f
CopyMode	bin/matlab/classes/matlabheader.h	/^typedef int CopyMode;$/;"	t
CreateCoarsenedHierarchy	src/dm/impls/mesh/examples/tutorials/Coarsener.h	/^PetscErrorCode CreateCoarsenedHierarchy(Obj<ALE::Mesh>& mesh, int dim, int nMeshes, float beta = 1.41)$/;"	f	namespace:ALE::Coarsener
CreateCoarsenedHierarchyNew	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^PetscErrorCode CreateCoarsenedHierarchyNew (Obj<ALE::Mesh>& mesh, int dim, int nMeshes, double beta = 1.41)$/;"	f	namespace:ALE::Coarsener
CreateExactSolution_UFC	include/sieve/UFC.hh	/^ PetscErrorCode CreateExactSolution_UFC(Obj<PETSC_MESH_TYPE> m, Obj<PETSC_MESH_TYPE::real_section_type> s, ufc::form * form, PetscScalar (*exactSolution)(const double *))$/;"	f
CreateHex_3D	src/dm/impls/plex/examples/tests/ex5.c	/^PetscErrorCode CreateHex_3D(MPI_Comm comm, DM dm)$/;"	f
CreateHex_3D	src/dm/impls/plex/examples/tests/ex7.c	/^PetscErrorCode CreateHex_3D(MPI_Comm comm, DM dm)$/;"	f
CreateMatrix	src/dm/impls/mesh/examples/tests/operator1.cxx	/^PetscErrorCode CreateMatrix(Mesh mesh, MatType mtype, Mat *A)$/;"	f
CreateMesh	src/dm/impls/mesh/examples/tests/closure1.cxx	/^PetscErrorCode CreateMesh(MPI_Comm comm, DM *dm, Options *options)$/;"	f
CreateMesh	src/dm/impls/mesh/examples/tests/discretization1.cxx	/^PetscErrorCode CreateMesh(MPI_Comm comm, Obj<ALE::Mesh>& mesh, Options *options)$/;"	f
CreateMesh	src/dm/impls/mesh/examples/tests/ex1.c	/^PetscErrorCode CreateMesh(MPI_Comm comm, AppCtx *user, DM *dm)$/;"	f
CreateMesh	src/dm/impls/mesh/examples/tests/ex2.c	/^PetscErrorCode CreateMesh(MPI_Comm comm, AppCtx *user, DM *dm)$/;"	f
CreateMesh	src/dm/impls/mesh/examples/tests/ex3.c	/^PetscErrorCode CreateMesh(MPI_Comm comm, AppCtx *user, DM *dm)$/;"	f
CreateMesh	src/dm/impls/mesh/examples/tests/mesh2.cxx	/^PetscErrorCode CreateMesh(MPI_Comm comm, Obj<ALE::Mesh>& m, Options *options)$/;"	f
CreateMesh	src/dm/impls/mesh/examples/tests/operator1.cxx	/^PetscErrorCode CreateMesh(MPI_Comm comm, Obj<ALE::Mesh>& m, Options *options)$/;"	f
CreateMesh	src/dm/impls/mesh/examples/tutorials/ex1.c	/^PetscErrorCode CreateMesh(MPI_Comm comm, Options *options, DM *mesh)$/;"	f
CreateMesh	src/dm/impls/mesh/examples/tutorials/ex_coarsen.c	/^PetscErrorCode CreateMesh(MPI_Comm comm, Obj<ALE::Mesh>& mesh, Options *options)$/;"	f
CreateMesh	src/dm/impls/mesh/examples/tutorials/ex_coarsen.h	/^PetscErrorCode CreateMesh(MPI_Comm comm, Obj<ALE::Mesh>& mesh)$/;"	f
CreateMesh	src/dm/impls/mesh/examples/tutorials/ex_coarsen_2.c	/^PetscErrorCode CreateMesh(MPI_Comm comm, Obj<ALE::Mesh>& mesh, Options *options)$/;"	f
CreateMesh	src/dm/impls/mesh/examples/tutorials/ex_coarsen_3.c	/^PetscErrorCode CreateMesh(MPI_Comm comm, Obj<ALE::Mesh>& mesh, Options *options)$/;"	f
CreateMesh	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^PetscErrorCode CreateMesh(MPI_Comm comm, DM *dm, Options *options)$/;"	f
CreateMesh	src/dm/impls/moab/examples/tests/ex1.cxx	/^PetscErrorCode CreateMesh(MPI_Comm comm, AppCtx *user, DM *dm)$/;"	f
CreateMesh	src/dm/impls/plex/examples/tests/ex1.c	/^PetscErrorCode CreateMesh(MPI_Comm comm, AppCtx *user, DM *dm)$/;"	f
CreateMesh	src/dm/impls/plex/examples/tests/ex3.c	/^PetscErrorCode CreateMesh(MPI_Comm comm, AppCtx *user, DM *dm)$/;"	f
CreateMesh	src/dm/impls/plex/examples/tests/ex4.c	/^PetscErrorCode CreateMesh(MPI_Comm comm, AppCtx *user, DM *dm)$/;"	f
CreateMesh	src/dm/impls/plex/examples/tests/ex5.c	/^PetscErrorCode CreateMesh(MPI_Comm comm, AppCtx *user, DM *dm)$/;"	f
CreateMesh	src/dm/impls/plex/examples/tests/ex7.c	/^PetscErrorCode CreateMesh(MPI_Comm comm, PetscInt testNum, AppCtx *user, DM *dm)$/;"	f
CreateMeshBoundary	src/dm/impls/mesh/examples/tutorials/ex1.c	/^PetscErrorCode CreateMeshBoundary(DM mesh, Options *options)$/;"	f
CreateOdd	src/dm/impls/mesh/examples/tutorials/ex1.c	/^PetscErrorCode CreateOdd(DM mesh, Options *options, SectionInt *odd)$/;"	f
CreatePartition	src/dm/impls/mesh/examples/tests/mesh2.cxx	/^PetscErrorCode CreatePartition(const Obj<ALE::Mesh>& m, const Obj<ALE::Mesh::int_section_type>& s)$/;"	f
CreatePartition	src/dm/impls/mesh/examples/tests/operator1.cxx	/^PetscErrorCode CreatePartition(const Obj<ALE::Mesh>& m, const Obj<ALE::Mesh::int_section_type>& s)$/;"	f
CreatePartition	src/dm/impls/mesh/examples/tutorials/ex1.c	/^PetscErrorCode CreatePartition(DM mesh, SectionInt *partition)$/;"	f
CreateProblem	src/dm/impls/mesh/examples/tests/operator1.cxx	/^PetscErrorCode CreateProblem(const Obj<ALE::Mesh>& m, Options *options)$/;"	f
CreateProblem_UFC	include/sieve/UFC.hh	/^PetscErrorCode CreateProblem_UFC(DM dm, const char * name, ufc::form * form,  const int numBC, const int *markers, double (**bcFuncs)(const double * coords), double(*exactFunc)(const double * coords)) {$/;"	f
CreateQuad_2D	src/dm/impls/plex/examples/tests/ex5.c	/^PetscErrorCode CreateQuad_2D(MPI_Comm comm, DM dm)$/;"	f
CreateQuad_2D	src/dm/impls/plex/examples/tests/ex7.c	/^PetscErrorCode CreateQuad_2D(MPI_Comm comm, PetscInt testNum, DM dm)$/;"	f
CreateScatterOverlap	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^PetscErrorCode CreateScatterOverlap(const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const bool localNumbering, const Options *options)$/;"	f
CreateSieve	src/dm/impls/mesh/examples/tests/ex01.c	/^PetscErrorCode CreateSieve(MPI_Comm comm, int debug)$/;"	f
CreateSimplex	src/dm/impls/mesh/examples/tests/meshing.cxx	/^PetscErrorCode CreateSimplex(MPI_Comm comm, ALE::Obj<ALE::Mesh> &m, Options * options) {$/;"	f
CreateSimplexHybrid_2D	src/dm/impls/plex/examples/tests/ex4.c	/^PetscErrorCode CreateSimplexHybrid_2D(MPI_Comm comm, DM dm)$/;"	f
CreateSimplex_2D	src/dm/impls/plex/examples/tests/ex5.c	/^PetscErrorCode CreateSimplex_2D(MPI_Comm comm, DM dm)$/;"	f
CreateSimplex_2D	src/dm/impls/plex/examples/tests/ex7.c	/^PetscErrorCode CreateSimplex_2D(MPI_Comm comm, DM dm)$/;"	f
CreateSimplex_3D	src/dm/impls/plex/examples/tests/ex5.c	/^PetscErrorCode CreateSimplex_3D(MPI_Comm comm, DM dm)$/;"	f
CreateSimplex_3D	src/dm/impls/plex/examples/tests/ex7.c	/^PetscErrorCode CreateSimplex_3D(MPI_Comm comm, DM dm)$/;"	f
CreateSpacingFunction	src/dm/impls/mesh/examples/tutorials/Coarsener.h	/^PetscErrorCode CreateSpacingFunction(Obj<ALE::Mesh> & mesh, int dim)$/;"	f	namespace:ALE::Coarsener
CreateSpacingFunction	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^PetscErrorCode HierarchyBuilder::CreateSpacingFunction()$/;"	f	class:ALE::Hierarchy::HierarchyBuilder
CreateSquareMesh	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^PetscErrorCode CreateSquareMesh(Obj<ALE::Mesh>& mesh, const Options *options)$/;"	f
CreateSquareMesh	src/dm/impls/mesh/examples/tests/sieveTests.cxx	/^PetscErrorCode CreateSquareMesh(Obj<MeshT>& mesh, const Options *options)$/;"	f
Cxx	config/BuildSystem/build/templates/usingCxx.py	/^    import build.compile.Cxx$/;"	i
Cxx	config/PETSc/FEM.py	/^      import Cxx, CxxHelper$/;"	i
Cxx	config/PETSc/packages/Generator.py	/^        import Cxx$/;"	i
CxxHelper	config/PETSc/FEM.py	/^      import Cxx, CxxHelper$/;"	i
CxxHelper	config/PETSc/packages/Generator.py	/^        import CxxHelper$/;"	i
CxxMPICheck	config/BuildSystem/config/packages/MPI.py	/^  def CxxMPICheck(self):$/;"	m	class:Configure
CxxVisitor	config/PETSc/FEM.py	/^    import CxxVisitor$/;"	i
DEFAULT	include/sieve/ALE_args.hh	/^    Arg& DEFAULT(const T& v) {$/;"	f	struct:ALE::Arg
DEFAULT_FONT_FAMILY	bin/TOPSInstaller.py	/^DEFAULT_FONT_FAMILY   = ("MS", "Sans", "Serif")$/;"	v
DEFAULT_FONT_SIZE	bin/TOPSInstaller.py	/^DEFAULT_FONT_SIZE     = 10$/;"	v
DEFAULT_METHOD	include/sieve/Partitioner.hh	/^      enum {DEFAULT_METHOD = 1, INERTIAL_METHOD = 3};$/;"	e	enum:ALE::Chaco::Partitioner::__anon8
DESTROY	include/petsc-private/logimpl.h	13;"	d
DIFFERENT_NONZERO_PATTERN	include/petscmat.h	/^typedef enum {DIFFERENT_NONZERO_PATTERN,SUBSET_NONZERO_PATTERN,SAME_NONZERO_PATTERN,SAME_PRECONDITIONER} MatStructure;$/;"	e	enum:__anon87
DIM	src/dm/impls/mesh/examples/tutorials/makefile	/^DIM              = 3$/;"	m
DIRS	include/finclude/makefile	/^DIRS      =$/;"	m
DIRS	include/makefile	/^DIRS     = finclude petsc-private sieve$/;"	m
DIRS	include/petsc-private/makefile	/^DIRS     =$/;"	m
DIRS	include/sieve/makefile	/^DIRS     =$/;"	m
DIRS	interfaces/lua/makefile	/^DIRS	  =$/;"	m
DIRS	interfaces/lua/src/makefile	/^DIRS	  =$/;"	m
DIRS	interfaces/makefile	/^DIRS	  = lua$/;"	m
DIRS	src/dm/dt/examples/makefile	/^DIRS     = tests$/;"	m
DIRS	src/dm/dt/makefile	/^DIRS	 = interface examples$/;"	m
DIRS	src/dm/impls/mesh/examples/makefile	/^DIRS     = tutorials$/;"	m
DIRS	src/dm/impls/mesh/ftn-custom/makefile	/^DIRS     =$/;"	m
DIRS	src/dm/impls/mesh/makefile	/^DIRS     =$/;"	m
DIRS	src/dm/impls/moab/examples/makefile	/^DIRS	 = tests$/;"	m
DIRS	src/dm/impls/moab/makefile	/^DIRS     = examples$/;"	m
DIRS	src/dm/impls/plex/ftn-custom/makefile	/^DIRS     =$/;"	m
DM	bin/matlab/classes/matlabheader.h	/^typedef PetscPointer DM;$/;"	t
DM	include/finclude/petscdmdef.h	13;"	d
DM	include/petscdmtypes.h	/^typedef struct _p_DM* DM;$/;"	t	typeref:struct:_p_DM
DMADDA	include/petscdm.h	22;"	d
DMBuilder	include/sieve/DMBuilder.hh	/^  class DMBuilder {$/;"	c	namespace:ALE
DMCARTESIAN	include/petscdm.h	28;"	d
DMCOMPOSITE	include/petscdm.h	23;"	d
DMCoarsenHierarchy_Mesh	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMCoarsenHierarchy_Mesh(DM mesh, int numLevels, DM *coarseHierarchy)$/;"	f
DMCoarsenHookLink	include/petsc-private/dmimpl.h	/^typedef struct _DMCoarsenHookLink *DMCoarsenHookLink;$/;"	t	typeref:struct:_DMCoarsenHookLink
DMConvert_DA_Mesh	src/dm/impls/mesh/meshcreate.c	/^PetscErrorCode DMConvert_DA_Mesh(DM dm, DMType newtype, DM *dmNew)$/;"	f
DMCreateGlobalVector_Mesh	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMCreateGlobalVector_Mesh(DM dm, Vec *gvec)$/;"	f
DMCreateGlobalVector_Moab	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMCreateGlobalVector_Moab(DM dm,Vec *gvec)$/;"	f
DMCreateInterpolation_Mesh	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMCreateInterpolation_Mesh(DM dmCoarse, DM dmFine, Mat *interpolation, Vec *scaling)$/;"	f
DMCreateLocalVector_Mesh	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMCreateLocalVector_Mesh(DM dm, Vec *lvec)$/;"	f
DMCreateLocalVector_Moab	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMCreateLocalVector_Moab(DM dm,Vec *gvec)$/;"	f
DMCreateMatrix_Mesh	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMCreateMatrix_Mesh(DM dm, MatType mtype, Mat *J)$/;"	f
DMCreate_Mesh	src/dm/impls/mesh/meshcreate.c	/^PetscErrorCode DMCreate_Mesh(DM dm)$/;"	f
DMCreate_Moab	src/dm/impls/moab/dmmoab.cxx	/^PETSC_EXTERN PetscErrorCode DMCreate_Moab(DM dm)$/;"	f
DMDA	include/petscdm.h	21;"	d
DMDABoundaryType	bin/matlab/classes/matlabheader.h	/^typedef int DMDABoundaryType;$/;"	t
DMDABoundaryType	include/finclude/petscdmdadef.h	13;"	d
DMDABoundaryType	include/petscdmdatypes.h	/^typedef enum { DMDA_BOUNDARY_NONE, DMDA_BOUNDARY_GHOSTED, DMDA_BOUNDARY_MIRROR, DMDA_BOUNDARY_PERIODIC } DMDABoundaryType;$/;"	t	typeref:enum:__anon2
DMDABoundaryTypes	include/petscdmda.h	/^PETSC_EXTERN const char *const DMDABoundaryTypes[];$/;"	v
DMDACoor2d	include/petscdmda.h	/^typedef struct {PetscScalar x,y;} DMDACoor2d;$/;"	t	typeref:struct:__anon17
DMDACoor3d	include/petscdmda.h	/^typedef struct {PetscScalar x,y,z;} DMDACoor3d;$/;"	t	typeref:struct:__anon18
DMDADirection	include/finclude/petscdmdadef.h	15;"	d
DMDADirection	include/petscdmda.h	/^typedef enum { DMDA_X,DMDA_Y,DMDA_Z } DMDADirection;$/;"	t	typeref:enum:__anon16
DMDAElementType	include/finclude/petscdmdadef.h	49;"	d
DMDAElementType	include/petscdmdatypes.h	/^typedef enum { DMDA_ELEMENT_P1, DMDA_ELEMENT_Q1 } DMDAElementType;$/;"	t	typeref:enum:__anon4
DMDAInterpolationType	include/finclude/petscdmdadef.h	48;"	d
DMDAInterpolationType	include/petscdmdatypes.h	/^typedef enum { DMDA_Q0, DMDA_Q1 } DMDAInterpolationType;$/;"	t	typeref:enum:__anon3
DMDALocalInfo	include/finclude/petscdmdadef.h	17;"	d
DMDALocalInfo	include/petscdmdatypes.h	/^} DMDALocalInfo;$/;"	t	typeref:struct:__anon5
DMDASNESFunction	include/petscsnes.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*DMDASNESFunction)(DMDALocalInfo*,void*,void*,void*);$/;"	t
DMDASNESJacobian	include/petscsnes.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*DMDASNESJacobian)(DMDALocalInfo*,void*,Mat,Mat,MatStructure*,void*);$/;"	t
DMDASNESObjective	include/petscsnes.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*DMDASNESObjective)(DMDALocalInfo*,void*,PetscReal*,void*);$/;"	t
DMDAStencilType	bin/matlab/classes/matlabheader.h	/^typedef int DMDAStencilType;$/;"	t
DMDAStencilType	include/finclude/petscdmdadef.h	14;"	d
DMDAStencilType	include/petscdmdatypes.h	/^typedef enum { DMDA_STENCIL_STAR,DMDA_STENCIL_BOX } DMDAStencilType;$/;"	t	typeref:enum:__anon1
DMDATSIFunctionLocal	include/petscts.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*DMDATSIFunctionLocal)(DMDALocalInfo*,PetscReal,void*,void*,void*,void*);$/;"	t
DMDATSIJacobianLocal	include/petscts.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*DMDATSIJacobianLocal)(DMDALocalInfo*,PetscReal,void*,void*,PetscReal,Mat,Mat,MatStructure*,void*);$/;"	t
DMDATSRHSFunctionLocal	include/petscts.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*DMDATSRHSFunctionLocal)(DMDALocalInfo*,PetscReal,void*,void*,void*);$/;"	t
DMDATSRHSJacobianLocal	include/petscts.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*DMDATSRHSJacobianLocal)(DMDALocalInfo*,PetscReal,void*,Mat,Mat,MatStructure*,void*);$/;"	t
DMDA_BOUNDARY_GHOSTED	include/petscdmdatypes.h	/^typedef enum { DMDA_BOUNDARY_NONE, DMDA_BOUNDARY_GHOSTED, DMDA_BOUNDARY_MIRROR, DMDA_BOUNDARY_PERIODIC } DMDABoundaryType;$/;"	e	enum:__anon2
DMDA_BOUNDARY_MIRROR	include/petscdmdatypes.h	/^typedef enum { DMDA_BOUNDARY_NONE, DMDA_BOUNDARY_GHOSTED, DMDA_BOUNDARY_MIRROR, DMDA_BOUNDARY_PERIODIC } DMDABoundaryType;$/;"	e	enum:__anon2
DMDA_BOUNDARY_NONE	include/petscdmdatypes.h	/^typedef enum { DMDA_BOUNDARY_NONE, DMDA_BOUNDARY_GHOSTED, DMDA_BOUNDARY_MIRROR, DMDA_BOUNDARY_PERIODIC } DMDABoundaryType;$/;"	e	enum:__anon2
DMDA_BOUNDARY_PERIODIC	include/petscdmdatypes.h	/^typedef enum { DMDA_BOUNDARY_NONE, DMDA_BOUNDARY_GHOSTED, DMDA_BOUNDARY_MIRROR, DMDA_BOUNDARY_PERIODIC } DMDABoundaryType;$/;"	e	enum:__anon2
DMDA_ELEMENT_P1	include/petscdmdatypes.h	/^typedef enum { DMDA_ELEMENT_P1, DMDA_ELEMENT_Q1 } DMDAElementType;$/;"	e	enum:__anon4
DMDA_ELEMENT_Q1	include/petscdmdatypes.h	/^typedef enum { DMDA_ELEMENT_P1, DMDA_ELEMENT_Q1 } DMDAElementType;$/;"	e	enum:__anon4
DMDA_LOCAL_INFO_DIM	include/finclude/petscdmdadef.h	23;"	d
DMDA_LOCAL_INFO_DOF	include/finclude/petscdmdadef.h	24;"	d
DMDA_LOCAL_INFO_GXM	include/finclude/petscdmdadef.h	37;"	d
DMDA_LOCAL_INFO_GXS	include/finclude/petscdmdadef.h	34;"	d
DMDA_LOCAL_INFO_GYM	include/finclude/petscdmdadef.h	38;"	d
DMDA_LOCAL_INFO_GYS	include/finclude/petscdmdadef.h	35;"	d
DMDA_LOCAL_INFO_GZM	include/finclude/petscdmdadef.h	39;"	d
DMDA_LOCAL_INFO_GZS	include/finclude/petscdmdadef.h	36;"	d
DMDA_LOCAL_INFO_MX	include/finclude/petscdmdadef.h	25;"	d
DMDA_LOCAL_INFO_MY	include/finclude/petscdmdadef.h	26;"	d
DMDA_LOCAL_INFO_MZ	include/finclude/petscdmdadef.h	27;"	d
DMDA_LOCAL_INFO_SIZE	include/finclude/petscdmdadef.h	22;"	d
DMDA_LOCAL_INFO_XM	include/finclude/petscdmdadef.h	31;"	d
DMDA_LOCAL_INFO_XS	include/finclude/petscdmdadef.h	28;"	d
DMDA_LOCAL_INFO_YM	include/finclude/petscdmdadef.h	32;"	d
DMDA_LOCAL_INFO_YS	include/finclude/petscdmdadef.h	29;"	d
DMDA_LOCAL_INFO_ZM	include/finclude/petscdmdadef.h	33;"	d
DMDA_LOCAL_INFO_ZS	include/finclude/petscdmdadef.h	30;"	d
DMDA_LocalADFunction	include/petsc-private/dmdaimpl.h	/^PETSC_EXTERN PetscLogEvent DMDA_LocalADFunction;$/;"	v
DMDA_MAX_WORK_ARRAYS	include/petsc-private/dmdaimpl.h	56;"	d
DMDA_Q0	include/petscdmdatypes.h	/^typedef enum { DMDA_Q0, DMDA_Q1 } DMDAInterpolationType;$/;"	e	enum:__anon3
DMDA_Q1	include/petscdmdatypes.h	/^typedef enum { DMDA_Q0, DMDA_Q1 } DMDAInterpolationType;$/;"	e	enum:__anon3
DMDA_STENCIL_BOX	include/petscdmdatypes.h	/^typedef enum { DMDA_STENCIL_STAR,DMDA_STENCIL_BOX } DMDAStencilType;$/;"	e	enum:__anon1
DMDA_STENCIL_STAR	include/petscdmdatypes.h	/^typedef enum { DMDA_STENCIL_STAR,DMDA_STENCIL_BOX } DMDAStencilType;$/;"	e	enum:__anon1
DMDA_X	include/petscdmda.h	/^typedef enum { DMDA_X,DMDA_Y,DMDA_Z } DMDADirection;$/;"	e	enum:__anon16
DMDA_Y	include/petscdmda.h	/^typedef enum { DMDA_X,DMDA_Y,DMDA_Z } DMDADirection;$/;"	e	enum:__anon16
DMDA_Z	include/petscdmda.h	/^typedef enum { DMDA_X,DMDA_Y,DMDA_Z } DMDADirection;$/;"	e	enum:__anon16
DMDestroy_Mesh	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMDestroy_Mesh(DM dm)$/;"	f
DMDestroy_Moab	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMDestroy_Moab(DM dm)$/;"	f
DMGetLocalToGlobalMapping_Mesh	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMGetLocalToGlobalMapping_Mesh(DM dm)$/;"	f
DMGlobalToLocalBegin_Mesh	src/dm/impls/mesh/mesh.c	/^PetscErrorCode  DMGlobalToLocalBegin_Mesh(DM dm, Vec g, InsertMode mode, Vec l)$/;"	f
DMGlobalToLocalEnd_Mesh	src/dm/impls/mesh/mesh.c	/^PetscErrorCode  DMGlobalToLocalEnd_Mesh(DM dm, Vec g, InsertMode mode, Vec l)$/;"	f
DMGlobalToLocalHookLink	include/petsc-private/dmimpl.h	/^typedef struct _DMGlobalToLocalHookLink *DMGlobalToLocalHookLink;$/;"	t	typeref:struct:_DMGlobalToLocalHookLink
DMInterpolationInfo	include/petscdm.h	/^typedef struct _DMInterpolationInfo *DMInterpolationInfo;$/;"	t	typeref:struct:_DMInterpolationInfo
DMKSP	include/petsc-private/kspimpl.h	/^typedef struct _p_DMKSP *DMKSP;$/;"	t	typeref:struct:_p_DMKSP
DMKSPOps	include/petsc-private/kspimpl.h	/^typedef struct _DMKSPOps *DMKSPOps;$/;"	t	typeref:struct:_DMKSPOps
DMKSP_CLASSID	include/petscksp.h	/^PETSC_EXTERN PetscClassId DMKSP_CLASSID;$/;"	v
DMLabel	include/finclude/petscdmplexdef.h	10;"	d
DMLabel	include/petscdmplex.h	/^typedef struct _n_DMLabel *DMLabel;$/;"	t	typeref:struct:_n_DMLabel
DMList	include/petscdm.h	/^PETSC_EXTERN PetscFunctionList DMList;$/;"	v
DMLocalToGlobalBegin_Mesh	src/dm/impls/mesh/mesh.c	/^PetscErrorCode  DMLocalToGlobalBegin_Mesh(DM dm, Vec l, InsertMode mode, Vec g)$/;"	f
DMLocalToGlobalEnd_Mesh	src/dm/impls/mesh/mesh.c	/^PetscErrorCode  DMLocalToGlobalEnd_Mesh(DM dm, Vec l, InsertMode mode, Vec g)$/;"	f
DMMESH	include/petscdm.h	26;"	d
DMMOAB	include/petscdm.h	31;"	d
DMMeshAssembleMatrixDM	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshAssembleMatrixDM(Mat A, DM dm, SectionReal section, PetscInt e, PetscScalar v[], InsertMode mode)$/;"	f
DMMeshAssembleVector	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshAssembleVector(Vec b, PetscInt e, PetscScalar v[], InsertMode mode)$/;"	f
DMMeshAssembleVectorComplete	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshAssembleVectorComplete(Vec g, Vec l, InsertMode mode)$/;"	f
DMMeshAssembleVectorDM	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshAssembleVectorDM(Vec b, DM dm, SectionReal section, PetscInt e, PetscScalar v[], InsertMode mode)$/;"	f
DMMeshClone	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshClone(DM dm, DM *newdm)$/;"	f
DMMeshComputeCellGeometry	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshComputeCellGeometry(DM dm, PetscInt cell, PetscReal *v0, PetscReal *J, PetscReal *invJ, PetscReal *detJ)$/;"	f
DMMeshConvertOverlapToSF	src/dm/impls/mesh/examples/tests/ex2.c	/^PetscErrorCode DMMeshConvertOverlapToSF(DM dm, PetscSF *sf)$/;"	f
DMMeshCreate	src/dm/impls/mesh/meshcreate.c	/^PetscErrorCode  DMMeshCreate(MPI_Comm comm, DM *mesh)$/;"	f
DMMeshCreateBoxMesh	src/dm/impls/mesh/meshcreate.c	/^PetscErrorCode DMMeshCreateBoxMesh(MPI_Comm comm, PetscInt dim, PetscBool interpolate, DM *dm)$/;"	f
DMMeshCreateConeSection	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshCreateConeSection(DM dm, PetscSection *section)$/;"	f
DMMeshCreateCubeBoundary	src/dm/impls/mesh/meshcreate.c	/^PetscErrorCode DMMeshCreateCubeBoundary(DM dm, const PetscReal lower[], const PetscReal upper[], const PetscInt faces[])$/;"	f
DMMeshCreateExodus	src/dm/impls/mesh/meshexodus.c	/^PetscErrorCode DMMeshCreateExodus(MPI_Comm comm, const char filename[], DM *dm)$/;"	f
DMMeshCreateExodusNG	src/dm/impls/mesh/meshexodus.c	/^PetscErrorCode DMMeshCreateExodusNG(MPI_Comm comm, PetscInt exoid,DM *dm)$/;"	f
DMMeshCreateGlobalRealVector	src/dm/impls/mesh/section.c	/^PetscErrorCode DMMeshCreateGlobalRealVector(DM dm, SectionReal section, Vec *gvec)$/;"	f
DMMeshCreateGlobalScatter	include/petscdmmesh.hh	/^PetscErrorCode  DMMeshCreateGlobalScatter(const ALE::Obj<Mesh>& m, const ALE::Obj<Section>& s, VecScatter *scatter)$/;"	f
DMMeshCreateGlobalScatter	include/petscdmmesh.hh	/^PetscErrorCode  DMMeshCreateGlobalScatter(const ALE::Obj<Mesh>& m, const ALE::Obj<Section>& s, const ALE::Obj<typename Mesh::label_type>& label, VecScatter *scatter)$/;"	f
DMMeshCreateGlobalScatter	include/petscdmmesh.hh	/^PetscErrorCode  DMMeshCreateGlobalScatter(const ALE::Obj<Mesh>& m, const ALE::Obj<Section>& s, const ALE::Obj<typename Mesh::order_type>& globalOrder, bool includeConstraints, VecScatter *scatter)$/;"	f
DMMeshCreateGlobalScatter	include/petscdmmesh.hh	/^PetscErrorCode  DMMeshCreateGlobalScatter(const ALE::Obj<Mesh>& m, const std::string& name, const typename Section::chart_type& points, const ALE::Obj<Section>& s, VecScatter *scatter)$/;"	f
DMMeshCreateGlobalScatter	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshCreateGlobalScatter(DM dm, SectionReal section, VecScatter *scatter)$/;"	f
DMMeshCreateMatrix	include/petscdmmesh.hh	/^PetscErrorCode  DMMeshCreateMatrix(const Obj<Mesh>& mesh, const Obj<Section>& section, MatType mtype, Mat *J, int bs = -1, bool fillMatrix = false)$/;"	f
DMMeshCreateMatrix	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshCreateMatrix(DM dm, SectionReal section, MatType mtype, Mat *J)$/;"	f
DMMeshCreateMeshFromAdjacency	src/dm/impls/mesh/meshcreate.c	/^PetscErrorCode DMMeshCreateMeshFromAdjacency(MPI_Comm comm, PetscInt dim, PetscInt numCells, PetscInt numCorners, PetscInt cellVertices[], PetscInt spatialDim, PetscInt numVertices, const PetscReal coordinates[], PetscBool interpolate, DM *dm)$/;"	f
DMMeshCreateMeshFromAdjacencyHybrid	src/dm/impls/mesh/meshcreate.c	/^PetscErrorCode DMMeshCreateMeshFromAdjacencyHybrid(MPI_Comm comm, PetscInt dim, PetscInt numCells, PetscInt numCorners[], PetscInt cellVertices[], PetscInt spatialDim, PetscInt numVertices, const PetscReal coordinates[], PetscBool interpolate, DM *dm)$/;"	f
DMMeshCreateNeighborCSR	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshCreateNeighborCSR(DM dm, PetscInt *numVertices, PetscInt **offsets, PetscInt **adjacency)$/;"	f
DMMeshCreatePCICE	src/dm/impls/mesh/meshpcice.c	/^PetscErrorCode DMMeshCreatePCICE(MPI_Comm comm, const int dim, const char coordFilename[], const char adjFilename[], PetscBool interpolate, const char bcFilename[], DM *mesh)$/;"	f
DMMeshCreatePartition	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshCreatePartition(DM dm, PetscSection *partSection, IS *partition, PetscInt height)$/;"	f
DMMeshCreatePartitionClosure	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshCreatePartitionClosure(DM dm, PetscSection pointSection, IS pointPartition, PetscSection *section, IS *partition)$/;"	f
DMMeshCreateScatterToZeroCell	src/dm/impls/mesh/meshexodus.c	/^PetscErrorCode DMMeshCreateScatterToZeroCell(DM dm,VecScatter *scatter)$/;"	f
DMMeshCreateScatterToZeroCellSet	src/dm/impls/mesh/meshexodus.c	/^PetscErrorCode DMMeshCreateScatterToZeroCellSet(DM dm,IS is_local,IS is_zero,VecScatter *scatter)$/;"	f
DMMeshCreateScatterToZeroVertex	src/dm/impls/mesh/meshexodus.c	/^PetscErrorCode DMMeshCreateScatterToZeroVertex(DM dm,VecScatter *scatter)$/;"	f
DMMeshCreateScatterToZeroVertexSet	src/dm/impls/mesh/meshexodus.c	/^PetscErrorCode DMMeshCreateScatterToZeroVertexSet(DM dm,IS is_local,IS is_zero,VecScatter *scatter)$/;"	f
DMMeshCreateSection	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshCreateSection(DM dm, PetscInt dim, PetscInt numFields, PetscInt numComp[], PetscInt numDof[], PetscInt numBC, PetscInt bcField[], IS bcPoints[], PetscSection *section)$/;"	f
DMMeshCreateSectionRealIS	src/dm/impls/mesh/section.c	/^PetscErrorCode DMMeshCreateSectionRealIS(DM dm,IS is,const char name[],PetscInt fiberDim,SectionReal *section)$/;"	f
DMMeshCreateSquareBoundary	src/dm/impls/mesh/meshcreate.c	/^PetscErrorCode DMMeshCreateSquareBoundary(DM dm, const PetscReal lower[], const PetscReal upper[], const PetscInt edges[])$/;"	f
DMMeshCreateVector	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshCreateVector(DM mesh, SectionReal section, Vec *vec)$/;"	f
DMMeshDistribute	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshDistribute(DM dm, const char partitioner[], DM *dmParallel)$/;"	f
DMMeshDistributeByFace	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshDistributeByFace(DM serialMesh, const char partitioner[], DM *parallelMesh)$/;"	f
DMMeshDistributeField	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshDistributeField(DM dm, PetscSF pointSF, PetscSection originalSection, Vec originalVec, PetscSection newSection, Vec newVec)$/;"	f
DMMeshFinalize	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshFinalize()$/;"	f
DMMeshGenerate	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGenerate(DM boundary, PetscBool interpolate, DM *mesh)$/;"	f
DMMeshGenerate_Triangle	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGenerate_Triangle(DM boundary, PetscBool interpolate, DM *dm)$/;"	f
DMMeshGetCellSectionInt	src/dm/impls/mesh/section.c	/^PetscErrorCode DMMeshGetCellSectionInt(DM dm, const char name[], PetscInt fiberDim, SectionInt *section)$/;"	f
DMMeshGetCellSectionReal	src/dm/impls/mesh/section.c	/^PetscErrorCode DMMeshGetCellSectionReal(DM dm, const char name[], PetscInt fiberDim, SectionReal *section)$/;"	f
DMMeshGetChart	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetChart(DM dm, PetscInt *pStart, PetscInt *pEnd)$/;"	f
DMMeshGetCone	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetCone(DM dm, PetscInt p, const PetscInt *cone[])$/;"	f
DMMeshGetConeSection	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetConeSection(DM dm, PetscSection *section)$/;"	f
DMMeshGetConeSize	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetConeSize(DM dm, PetscInt p, PetscInt *size)$/;"	f
DMMeshGetCones	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetCones(DM dm, PetscInt *cones[])$/;"	f
DMMeshGetCoordinateSection	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetCoordinateSection(DM dm, PetscSection *section)$/;"	f
DMMeshGetCoordinateVec	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetCoordinateVec(DM dm, Vec *coordinates)$/;"	f
DMMeshGetCoordinates	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetCoordinates(DM dm, PetscBool columnMajor, PetscInt *numVertices, PetscInt *dim, PetscReal *coords[])$/;"	f
DMMeshGetDefaultSection	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetDefaultSection(DM dm, PetscSection *section)$/;"	f
DMMeshGetDepthStratum	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetDepthStratum(DM dm, PetscInt stratumValue, PetscInt *start, PetscInt *end)$/;"	f
DMMeshGetDimension	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetDimension(DM dm, PetscInt *dim)$/;"	f
DMMeshGetElements	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetElements(DM dm, PetscBool columnMajor, PetscInt *numElements, PetscInt *numCorners, PetscInt *vertices[])$/;"	f
DMMeshGetGlobalScatter	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetGlobalScatter(DM dm, VecScatter *scatter)$/;"	f
DMMeshGetHeightStratum	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetHeightStratum(DM dm, PetscInt stratumValue, PetscInt *start, PetscInt *end)$/;"	f
DMMeshGetLabelIdIS	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetLabelIdIS(DM dm, const char name[], IS *ids)$/;"	f
DMMeshGetLabelSize	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetLabelSize(DM dm, const char name[], PetscInt *size)$/;"	f
DMMeshGetLabelValue	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetLabelValue(DM dm, const char name[], PetscInt point, PetscInt *value)$/;"	f
DMMeshGetLocalFunction	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetLocalFunction(DM dm, PetscErrorCode (**lf)(DM, Vec, Vec, void*))$/;"	f
DMMeshGetLocalJacobian	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetLocalJacobian(DM dm, PetscErrorCode (**lj)(DM, Vec, Mat, void*))$/;"	f
DMMeshGetMaxSizes	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetMaxSizes(DM dm, PetscInt *maxConeSize, PetscInt *maxSupportSize)$/;"	f
DMMeshGetMaximumDegree	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetMaximumDegree(DM dm, PetscInt *maxDegree)$/;"	f
DMMeshGetMesh	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetMesh(DM dm, ALE::Obj<PETSC_MESH_TYPE>& m)$/;"	f
DMMeshGetSection	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetSection(DM dm, const char name[], PetscSection *section)$/;"	f
DMMeshGetSectionInt	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetSectionInt(DM dm, const char name[], SectionInt *section)$/;"	f
DMMeshGetSectionReal	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetSectionReal(DM dm, const char name[], SectionReal *section)$/;"	f
DMMeshGetStratumIS	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetStratumIS(DM dm, const char name[], PetscInt value, IS *is)$/;"	f
DMMeshGetStratumSize	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetStratumSize(DM dm, const char name[], PetscInt value, PetscInt *size)$/;"	f
DMMeshGetSupport	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetSupport(DM dm, PetscInt p, const PetscInt *support[])$/;"	f
DMMeshGetSupportSize	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetSupportSize(DM dm, PetscInt p, PetscInt *size)$/;"	f
DMMeshGetTransitiveClosure	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshGetTransitiveClosure(DM dm, PetscInt p, PetscBool useCone, PetscInt *numPoints, const PetscInt *points[])$/;"	f
DMMeshGetVertexSectionInt	src/dm/impls/mesh/section.c	/^PetscErrorCode DMMeshGetVertexSectionInt(DM dm, const char name[], PetscInt fiberDim, SectionInt *section)$/;"	f
DMMeshGetVertexSectionReal	src/dm/impls/mesh/section.c	/^PetscErrorCode DMMeshGetVertexSectionReal(DM dm, const char name[], PetscInt fiberDim, SectionReal *section)$/;"	f
DMMeshHasSectionInt	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshHasSectionInt(DM dm, const char name[], PetscBool  *flag)$/;"	f
DMMeshHasSectionReal	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshHasSectionReal(DM dm, const char name[], PetscBool  *flag)$/;"	f
DMMeshInterpolationInfo	include/petscdmmesh.h	/^typedef struct _DMMeshInterpolationInfo *DMMeshInterpolationInfo;$/;"	t	typeref:struct:_DMMeshInterpolationInfo
DMMeshJoinPoints	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshJoinPoints(DM dm, const PetscInt points[], PetscInt *coveredPoint)$/;"	f
DMMeshLoad	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshLoad(PetscViewer viewer, DM dm)$/;"	f
DMMeshLocalFunction1	include/petscdmmesh.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*DMMeshLocalFunction1)(DM, Vec, Vec, void*);$/;"	t
DMMeshLocalJacobian1	include/petscdmmesh.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*DMMeshLocalJacobian1)(DM, Vec, Mat, void*);$/;"	t
DMMeshMarkBoundaryCells	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshMarkBoundaryCells(DM dm, const char labelName[], PetscInt marker, PetscInt newMarker)$/;"	f
DMMeshMatSetClosure	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshMatSetClosure(DM dm, Mat A, PetscInt point, PetscScalar values[], InsertMode mode)$/;"	f
DMMeshMeetPoints	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshMeetPoints(DM dm, PetscInt numPoints, const PetscInt points[], PetscInt *numCoveringPoints, const PetscInt **coveringPoints)$/;"	f
DMMeshPartition_Chaco	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshPartition_Chaco(DM dm, PetscInt numVertices, PetscInt start[], PetscInt adjacency[], PetscSection *partSection, IS *partition)$/;"	f
DMMeshPartition_ParMetis	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshPartition_ParMetis(DM dm, PetscInt numVertices, PetscInt start[], PetscInt adjacency[], PetscSection *partSection, IS *partition)$/;"	f
DMMeshRefine	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshRefine(DM mesh, double refinementLimit, PetscBool interpolate, DM *refinedMesh)$/;"	f
DMMeshRestrictVector	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshRestrictVector(Vec g, Vec l, InsertMode mode)$/;"	f
DMMeshSetChart	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshSetChart(DM dm, PetscInt pStart, PetscInt pEnd)$/;"	f
DMMeshSetCone	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshSetCone(DM dm, PetscInt p, const PetscInt cone[])$/;"	f
DMMeshSetConeSize	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshSetConeSize(DM dm, PetscInt p, PetscInt size)$/;"	f
DMMeshSetCoordinateSection	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshSetCoordinateSection(DM dm, PetscSection section)$/;"	f
DMMeshSetDefaultSection	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshSetDefaultSection(DM dm, PetscSection section)$/;"	f
DMMeshSetDimension	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshSetDimension(DM dm, PetscInt dim)$/;"	f
DMMeshSetLabelValue	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshSetLabelValue(DM dm, const char name[], PetscInt point, PetscInt value)$/;"	f
DMMeshSetLocalFunction	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshSetLocalFunction(DM dm, PetscErrorCode (*lf)(DM, Vec, Vec, void*))$/;"	f
DMMeshSetLocalJacobian	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshSetLocalJacobian(DM dm, PetscErrorCode (*lj)(DM, Vec, Mat, void*))$/;"	f
DMMeshSetMaxDof	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshSetMaxDof(DM dm, PetscInt maxDof)$/;"	f
DMMeshSetMesh	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshSetMesh(DM dm, const ALE::Obj<PETSC_MESH_TYPE>& m)$/;"	f
DMMeshSetSection	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshSetSection(DM dm, const char name[], PetscSection section)$/;"	f
DMMeshSetSectionInt	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshSetSectionInt(DM dm, SectionInt section)$/;"	f
DMMeshSetSectionReal	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshSetSectionReal(DM dm, const char name[], SectionReal section)$/;"	f
DMMeshSetUp	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshSetUp(DM dm)$/;"	f
DMMeshSetupSection	src/dm/impls/mesh/section.c	/^PetscErrorCode DMMeshSetupSection(DM dm, SectionReal section)$/;"	f
DMMeshStratify	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshStratify(DM dm)$/;"	f
DMMeshSymmetrize	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshSymmetrize(DM dm)$/;"	f
DMMeshUpdateOperator	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshUpdateOperator(Mat A, const ALE::Obj<PETSC_MESH_TYPE>& m, const ALE::Obj<PETSC_MESH_TYPE::real_section_type>& section, const ALE::Obj<PETSC_MESH_TYPE::order_type>& globalOrder, const PETSC_MESH_TYPE::point_type& e, PetscScalar array[], InsertMode mode)$/;"	f
DMMeshUpdateOperatorGeneral	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshUpdateOperatorGeneral(Mat A, const ALE::Obj<PETSC_MESH_TYPE>& rowM, const ALE::Obj<PETSC_MESH_TYPE::real_section_type>& rowSection, const ALE::Obj<PETSC_MESH_TYPE::order_type>& rowGlobalOrder, const PETSC_MESH_TYPE::point_type& rowE, const ALE::Obj<PETSC_MESH_TYPE>& colM, const ALE::Obj<PETSC_MESH_TYPE::real_section_type>& colSection, const ALE::Obj<PETSC_MESH_TYPE::order_type>& colGlobalOrder, const PETSC_MESH_TYPE::point_type& colE, PetscScalar array[], InsertMode mode)$/;"	f
DMMeshVecGetClosure	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshVecGetClosure(DM dm, Vec v, PetscInt point, const PetscScalar *values[])$/;"	f
DMMeshVecRestoreClosure	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshVecRestoreClosure(DM dm, Vec v, PetscInt point, const PetscScalar *values[])$/;"	f
DMMeshVecSetClosure	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshVecSetClosure(DM dm, Vec v, PetscInt point, const PetscScalar values[], InsertMode mode)$/;"	f
DMMeshViewExodusSplit	src/dm/impls/mesh/meshexodus.c	/^PetscErrorCode DMMeshViewExodusSplit(DM dm,PetscInt exoid)$/;"	f
DMMeshView_Mesh_Ascii	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMMeshView_Mesh_Ascii(DM dm, PetscViewer viewer)$/;"	f
DMMeshView_Sieve_Ascii	include/petscdmmesh_viewers.hh	/^PetscErrorCode DMMeshView_Sieve_Ascii(const Obj<Mesh>& mesh, const Obj<Section>& partition, PetscViewer viewer)$/;"	f
DMMesh_DelTag	src/dm/impls/mesh/mesh.c	/^PetscMPIInt DMMesh_DelTag(MPI_Comm comm,PetscMPIInt keyval,void *attr_val,void *extra_state)$/;"	f
DMMesh_GetGlobalScatter	include/petscdmmesh.h	/^PETSC_EXTERN PetscLogEvent DMMesh_View, DMMesh_GetGlobalScatter, DMMesh_restrictVector, DMMesh_assembleVector, DMMesh_assembleVectorComplete, DMMesh_assembleMatrix, DMMesh_updateOperator;$/;"	v
DMMesh_GetGlobalScatter	src/dm/impls/mesh/mesh.c	/^PetscLogEvent DMMesh_View, DMMesh_GetGlobalScatter, DMMesh_restrictVector, DMMesh_assembleVector, DMMesh_assembleVectorComplete, DMMesh_assembleMatrix, DMMesh_updateOperator;$/;"	v
DMMesh_View	include/petscdmmesh.h	/^PETSC_EXTERN PetscLogEvent DMMesh_View, DMMesh_GetGlobalScatter, DMMesh_restrictVector, DMMesh_assembleVector, DMMesh_assembleVectorComplete, DMMesh_assembleMatrix, DMMesh_updateOperator;$/;"	v
DMMesh_View	src/dm/impls/mesh/mesh.c	/^PetscLogEvent DMMesh_View, DMMesh_GetGlobalScatter, DMMesh_restrictVector, DMMesh_assembleVector, DMMesh_assembleVectorComplete, DMMesh_assembleMatrix, DMMesh_updateOperator;$/;"	v
DMMesh_assembleMatrix	include/petscdmmesh.h	/^PETSC_EXTERN PetscLogEvent DMMesh_View, DMMesh_GetGlobalScatter, DMMesh_restrictVector, DMMesh_assembleVector, DMMesh_assembleVectorComplete, DMMesh_assembleMatrix, DMMesh_updateOperator;$/;"	v
DMMesh_assembleMatrix	src/dm/impls/mesh/mesh.c	/^PetscLogEvent DMMesh_View, DMMesh_GetGlobalScatter, DMMesh_restrictVector, DMMesh_assembleVector, DMMesh_assembleVectorComplete, DMMesh_assembleMatrix, DMMesh_updateOperator;$/;"	v
DMMesh_assembleVector	include/petscdmmesh.h	/^PETSC_EXTERN PetscLogEvent DMMesh_View, DMMesh_GetGlobalScatter, DMMesh_restrictVector, DMMesh_assembleVector, DMMesh_assembleVectorComplete, DMMesh_assembleMatrix, DMMesh_updateOperator;$/;"	v
DMMesh_assembleVector	src/dm/impls/mesh/mesh.c	/^PetscLogEvent DMMesh_View, DMMesh_GetGlobalScatter, DMMesh_restrictVector, DMMesh_assembleVector, DMMesh_assembleVectorComplete, DMMesh_assembleMatrix, DMMesh_updateOperator;$/;"	v
DMMesh_assembleVectorComplete	include/petscdmmesh.h	/^PETSC_EXTERN PetscLogEvent DMMesh_View, DMMesh_GetGlobalScatter, DMMesh_restrictVector, DMMesh_assembleVector, DMMesh_assembleVectorComplete, DMMesh_assembleMatrix, DMMesh_updateOperator;$/;"	v
DMMesh_assembleVectorComplete	src/dm/impls/mesh/mesh.c	/^PetscLogEvent DMMesh_View, DMMesh_GetGlobalScatter, DMMesh_restrictVector, DMMesh_assembleVector, DMMesh_assembleVectorComplete, DMMesh_assembleMatrix, DMMesh_updateOperator;$/;"	v
DMMesh_restrictVector	include/petscdmmesh.h	/^PETSC_EXTERN PetscLogEvent DMMesh_View, DMMesh_GetGlobalScatter, DMMesh_restrictVector, DMMesh_assembleVector, DMMesh_assembleVectorComplete, DMMesh_assembleMatrix, DMMesh_updateOperator;$/;"	v
DMMesh_restrictVector	src/dm/impls/mesh/mesh.c	/^PetscLogEvent DMMesh_View, DMMesh_GetGlobalScatter, DMMesh_restrictVector, DMMesh_assembleVector, DMMesh_assembleVectorComplete, DMMesh_assembleMatrix, DMMesh_updateOperator;$/;"	v
DMMesh_updateOperator	include/petscdmmesh.h	/^PETSC_EXTERN PetscLogEvent DMMesh_View, DMMesh_GetGlobalScatter, DMMesh_restrictVector, DMMesh_assembleVector, DMMesh_assembleVectorComplete, DMMesh_assembleMatrix, DMMesh_updateOperator;$/;"	v
DMMesh_updateOperator	src/dm/impls/mesh/mesh.c	/^PetscLogEvent DMMesh_View, DMMesh_GetGlobalScatter, DMMesh_restrictVector, DMMesh_assembleVector, DMMesh_assembleVectorComplete, DMMesh_assembleMatrix, DMMesh_updateOperator;$/;"	v
DMMoabCreate	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMMoabCreate(MPI_Comm comm, DM *moab)$/;"	f
DMMoabCreateMoab	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMMoabCreateMoab(MPI_Comm comm, moab::Interface *mbiface, moab::ParallelComm *pcomm, moab::Tag ltog_tag, moab::Range *range, DM *moab)$/;"	f
DMMoabCreateVector	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMMoabCreateVector(DM dm,moab::Tag tag,PetscInt tag_size,moab::Range range,PetscBool serial, PetscBool destroy_tag,Vec *vec)$/;"	f
DMMoabGetBlockSize	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMMoabGetBlockSize(DM dm,PetscInt *bs)$/;"	f
DMMoabGetInterface	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMMoabGetInterface(DM dm,moab::Interface **mbiface)$/;"	f
DMMoabGetLocalToGlobalTag	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMMoabGetLocalToGlobalTag(DM dm,moab::Tag *ltog_tag)$/;"	f
DMMoabGetParallelComm	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMMoabGetParallelComm(DM dm,moab::ParallelComm **pcomm)$/;"	f
DMMoabGetRange	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMMoabGetRange(DM dm,moab::Range *range)$/;"	f
DMMoabGetVecRange	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMMoabGetVecRange(Vec vec,moab::Range *range)$/;"	f
DMMoabGetVecTag	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMMoabGetVecTag(Vec vec,moab::Tag *tag)$/;"	f
DMMoabSetBlockSize	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMMoabSetBlockSize(DM dm,PetscInt bs)$/;"	f
DMMoabSetInterface	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMMoabSetInterface(DM dm,moab::Interface *mbiface)$/;"	f
DMMoabSetLocalToGlobalTag	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMMoabSetLocalToGlobalTag(DM dm,moab::Tag ltogtag)$/;"	f
DMMoabSetParallelComm	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMMoabSetParallelComm(DM dm,moab::ParallelComm *pcomm)$/;"	f
DMMoabSetRange	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMMoabSetRange(DM dm,moab::Range range)$/;"	f
DMMoab_CreateTagName	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMMoab_CreateTagName(const moab::ParallelComm *pcomm,std::string& tag_name)$/;"	f
DMMoab_CreateVector	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMMoab_CreateVector(moab::Interface *mbiface,moab::ParallelComm *pcomm,moab::Tag tag,PetscInt tag_size,moab::Tag ltog_tag,moab::Range range,PetscBool serial, PetscBool destroy_tag,Vec *vec)$/;"	f
DMMoab_VecDuplicate	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMMoab_VecDuplicate(Vec x,Vec *y)$/;"	f
DMMoab_VecUserDestroy	src/dm/impls/moab/dmmoab.cxx	/^PetscErrorCode DMMoab_VecUserDestroy(void *user)$/;"	f
DMNamedVecLink	include/petsc-private/dmimpl.h	/^typedef struct _DMNamedVecLink *DMNamedVecLink;$/;"	t	typeref:struct:_DMNamedVecLink
DMOps	include/petsc-private/dmimpl.h	/^typedef struct _DMOps *DMOps;$/;"	t	typeref:struct:_DMOps
DMPATCH	include/petscdm.h	30;"	d
DMPLEX	include/petscdm.h	27;"	d
DMPLEX_Distribute	include/petsc-private/dmpleximpl.h	/^PETSC_EXTERN PetscLogEvent DMPLEX_Distribute, DMPLEX_Stratify;$/;"	v
DMPLEX_Stratify	include/petsc-private/dmpleximpl.h	/^PETSC_EXTERN PetscLogEvent DMPLEX_Distribute, DMPLEX_Stratify;$/;"	v
DMREDUNDANT	include/petscdm.h	29;"	d
DMRefineHookLink	include/petsc-private/dmimpl.h	/^typedef struct _DMRefineHookLink *DMRefineHookLink;$/;"	t	typeref:struct:_DMRefineHookLink
DMRefine_Mesh	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMRefine_Mesh(DM dm, MPI_Comm comm, DM *dmRefined)$/;"	f
DMRegisterAllCalled	include/petscdm.h	/^PETSC_EXTERN PetscBool         DMRegisterAllCalled;$/;"	v
DMSHELL	include/petscdm.h	25;"	d
DMSLICED	include/petscdm.h	24;"	d
DMSNES	include/petsc-private/snesimpl.h	/^typedef struct _p_DMSNES *DMSNES;$/;"	t	typeref:struct:_p_DMSNES
DMSNESOps	include/petsc-private/snesimpl.h	/^typedef struct _DMSNESOps *DMSNESOps;$/;"	t	typeref:struct:_DMSNESOps
DMSNES_CLASSID	include/petscsnes.h	/^PETSC_EXTERN PetscClassId DMSNES_CLASSID;$/;"	v
DMSetFromOptions_Mesh	src/dm/impls/mesh/meshcreate.c	/^PetscErrorCode  DMSetFromOptions_Mesh(DM dm)$/;"	f
DMSubDomainHookLink	include/petsc-private/dmimpl.h	/^typedef struct _DMSubDomainHookLink *DMSubDomainHookLink;$/;"	t	typeref:struct:_DMSubDomainHookLink
DMTS	include/petsc-private/tsimpl.h	/^typedef struct _p_DMTS *DMTS;$/;"	t	typeref:struct:_p_DMTS
DMTSOps	include/petsc-private/tsimpl.h	/^typedef struct _DMTSOps *DMTSOps;$/;"	t	typeref:struct:_DMTSOps
DMTS_CLASSID	include/petscts.h	/^PETSC_EXTERN PetscClassId DMTS_CLASSID;$/;"	v
DMType	include/petscdm.h	/^typedef const char* DMType;$/;"	t
DMVEC_STATUS_IN	include/petsc-private/dmimpl.h	/^typedef enum {DMVEC_STATUS_IN,DMVEC_STATUS_OUT} DMVecStatus;$/;"	e	enum:__anon22
DMVEC_STATUS_OUT	include/petsc-private/dmimpl.h	/^typedef enum {DMVEC_STATUS_IN,DMVEC_STATUS_OUT} DMVecStatus;$/;"	e	enum:__anon22
DMVecStatus	include/petsc-private/dmimpl.h	/^typedef enum {DMVEC_STATUS_IN,DMVEC_STATUS_OUT} DMVecStatus;$/;"	t	typeref:enum:__anon22
DMView_Mesh	src/dm/impls/mesh/mesh.c	/^PetscErrorCode DMView_Mesh(DM dm, PetscViewer viewer)$/;"	f
DMWorkLink	include/petsc-private/dmimpl.h	/^typedef struct _DMWorkLink *DMWorkLink;$/;"	t	typeref:struct:_DMWorkLink
DM_CLASSID	include/petscdm.h	/^PETSC_EXTERN PetscClassId DM_CLASSID;$/;"	v
DM_Cartesian	include/petsc-private/meshimpl.h	/^} DM_Cartesian;$/;"	t	typeref:struct:__anon17
DM_Convert	include/petsc-private/dmimpl.h	/^PETSC_EXTERN PetscLogEvent DM_Convert, DM_GlobalToLocal, DM_LocalToGlobal;$/;"	v
DM_DA	include/petsc-private/dmdaimpl.h	/^} DM_DA;$/;"	t	typeref:struct:__anon23
DM_FILE_CLASSID	include/petscdm.h	126;"	d
DM_GlobalToLocal	include/petsc-private/dmimpl.h	/^PETSC_EXTERN PetscLogEvent DM_Convert, DM_GlobalToLocal, DM_LocalToGlobal;$/;"	v
DM_LocalToGlobal	include/petsc-private/dmimpl.h	/^PETSC_EXTERN PetscLogEvent DM_Convert, DM_GlobalToLocal, DM_LocalToGlobal;$/;"	v
DM_MAX_WORK_VECTORS	include/petsc-private/dmimpl.h	100;"	d
DM_Mesh	include/petsc-private/meshimpl.h	/^} DM_Mesh;$/;"	t	typeref:struct:__anon16
DM_Moab	src/dm/impls/moab/dmmoab.cxx	/^} DM_Moab;$/;"	t	typeref:struct:__anon1	file:
DM_Patch	include/petsc-private/dmpatchimpl.h	/^} DM_Patch;$/;"	t	typeref:struct:__anon10
DM_Plex	include/petsc-private/dmpleximpl.h	/^} DM_Plex;$/;"	t	typeref:struct:__anon30
DONE	include/petscdmmesh_formats.hh	/^      enum ParserState {OUTSIDE, INSIDE_MESH, INSIDE_VERTICES, INSIDE_CELLS, DONE};$/;"	e	enum:ALE::Dolfin::XMLMesh::ParserState
Declarator	config/PETSc/FEM.py	/^    from Cxx import Declarator$/;"	i
Declarator	config/PETSc/FEM.py	/^    from Cxx import Define, Declarator$/;"	i
DeclaratorGroup	config/PETSc/FEM.py	/^    from Cxx import DeclaratorGroup$/;"	i
Define	config/PETSc/FEM.py	/^    from Cxx import Define$/;"	i
Define	config/PETSc/FEM.py	/^    from Cxx import Define, Declarator$/;"	i
DependencyAnalyzer	config/BuildSystem/sourceDatabase.py	/^class DependencyAnalyzer (logger.Logger):$/;"	c
DependencyBuilder	config/builder.py	/^class DependencyBuilder(logger.Logger):$/;"	c
DepthVisitor	include/sieve/Mesh.hh	/^      DepthVisitor(const sieve_type& s, const point_type& limit, label_type& d) : sieve(s), depth(d), maxDepth(-1), limitPoint(limit) {};$/;"	f	class:ALE::IBundle::DepthVisitor
DepthVisitor	include/sieve/Mesh.hh	/^      DepthVisitor(const sieve_type& s, label_type& d) : sieve(s), depth(d), maxDepth(0), limitPoint(sieve.getChart().max()+1) {};$/;"	f	class:ALE::IBundle::DepthVisitor
DepthVisitor	include/sieve/Mesh.hh	/^    class DepthVisitor {$/;"	c	class:ALE::IBundle
Derivatives	config/BuildSystem/config/packages/scientificpython.py	/^        import Scientific.Functions.Derivatives$/;"	i
Destroy	bin/matlab/classes/PetscViewer.m.html	/^    function Destroy(obj)$/;"	f
Destroy	include/petsc-private/sfimpl.h	/^  PetscErrorCode (*Destroy)(PetscSF);$/;"	m	struct:_PetscSFOps
DestroyMesh	src/dm/impls/mesh/examples/tests/closure1.cxx	/^PetscErrorCode DestroyMesh(DM dm, Options *options)$/;"	f
DestroyMesh	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^PetscErrorCode DestroyMesh(DM dm, Options *options)$/;"	f
DirectedGraph	config/BuildSystem/graph.py	/^class DirectedGraph(object):$/;"	c
DirectoryArchiver	config/BuildSystem/build/processor.py	/^class DirectoryArchiver(Linker):$/;"	c
DirectoryTreeWalker	config/builder.py	/^class DirectoryTreeWalker(logger.Logger):$/;"	c
DiscontinuousLagrange	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^from FIAT.discontinuous_lagrange import DiscontinuousLagrange$/;"	i
DiscontinuousLagrange	bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py	/^from FIAT.discontinuous_lagrange import DiscontinuousLagrange$/;"	i
DiscreteSieve	include/sieve/Field.hh	/^    DiscreteSieve() {$/;"	f	class:ALE::DiscreteSieve
DiscreteSieve	include/sieve/Field.hh	/^    DiscreteSieve(const Obj<Input>& points) {$/;"	f	class:ALE::DiscreteSieve
DiscreteSieve	include/sieve/Field.hh	/^  class DiscreteSieve {$/;"	c	namespace:ALE
Discretization	include/sieve/Mesh.hh	/^    Discretization(MPI_Comm comm, const int debug = 0) : ParallelObject(comm, debug), _quadSize(0), _points(NULL), _weights(NULL), _basisSize(0), _basis(NULL), _basisDer(NULL), _indices(NULL) {};$/;"	f	class:ALE::Discretization
Discretization	include/sieve/Mesh.hh	/^  class Discretization : public ALE::ParallelObject {$/;"	c	namespace:ALE
DistributeCoordinates	src/dm/impls/mesh/examples/tests/ex3.c	/^PetscErrorCode DistributeCoordinates(DM dm, PetscSF pointSF, DM parallelDM)$/;"	f
DistributeMesh	src/dm/impls/mesh/examples/tests/ex3.c	/^PetscErrorCode DistributeMesh(DM dm, AppCtx *user, PetscSF *pointSF, DM *parallelDM)$/;"	f
DistributeMesh	src/dm/impls/mesh/examples/tests/sieveTests.cxx	/^PetscErrorCode DistributeMesh(Obj<MeshT>& mesh, Obj<MeshT>& newMesh, const Options *options)$/;"	f
DistributeMesh	src/dm/impls/mesh/examples/tutorials/ex1.c	/^PetscErrorCode DistributeMesh(Options *options, DM *mesh)$/;"	f
Distribution	include/sieve/Distribution.hh	/^  class Distribution {$/;"	c	namespace:ALE
DistributionNew	include/sieve/Distribution.hh	/^  class DistributionNew {$/;"	c	namespace:ALE
DistributionTest	src/dm/impls/mesh/examples/tests/sieve2-old.cxx	/^PetscErrorCode DistributionTest(const Obj<ALE::Mesh>& mesh, const Obj<ALE::Mesh>& meshNew, Options *options)$/;"	f
Dolfin	include/petscdmmesh_formats.hh	/^  namespace Dolfin {$/;"	n	namespace:ALE
DoneWithFile	bin/pythonscripts/PetscBinaryIO.py	/^class DoneWithFile(Exception): pass$/;"	c
DoubletTest	src/dm/impls/mesh/examples/tests/overlap2.cxx	/^PetscErrorCode DoubletTest(MPI_Comm comm, Options *options)$/;"	f
DualSequence	include/sieve/Overlap.hh	/^  DualSequence(const first_type *begin, const second_type *beginRemote, const first_type *end, const second_type *endRemote) : beginP(begin), beginRemoteP(beginRemote), endP(end), endRemoteP(endRemote) {};$/;"	f	class:PETSc::DualSequence
DualSequence	include/sieve/Overlap.hh	/^class DualSequence {$/;"	c	namespace:PETSc
Dump	config/PETSc/Configure.py	/^  def Dump(self):$/;"	m	class:Configure
DumpModule	config/PETSc/Configure.py	/^  def DumpModule(self):$/;"	m	class:Configure
DumpPkgconfig	config/PETSc/Configure.py	/^  def DumpPkgconfig(self):$/;"	m	class:Configure
Duplicate	include/petsc-private/sfimpl.h	/^  PetscErrorCode (*Duplicate)(PetscSF,PetscSFDuplicateOption,PetscSF);$/;"	m	struct:_PetscSFOps
DynamicLinker	config/BuildSystem/config/compile/C.py	/^class DynamicLinker(config.compile.processor.Processor):$/;"	c
DynamicLinker	config/BuildSystem/config/compile/CUDA.py	/^class DynamicLinker(config.compile.C.DynamicLinker):$/;"	c
ENUM_DUMMY	include/petscsys.h	/^typedef enum { ENUM_DUMMY } PetscEnum;$/;"	e	enum:__anon22
ERROR	src/dm/impls/mesh/ALE.cxx	/^  void ERROR(PetscErrorCode ierr, const char *func, int line, const char *msg) {$/;"	f	namespace:ALE
ERRORMSG	src/dm/impls/mesh/ALE.cxx	/^  const char *ERRORMSG(const char *fmt, ...) {$/;"	f	namespace:ALE
EXAMPLESC	src/dm/dt/examples/tests/makefile	/^EXAMPLESC       = ex1.c$/;"	m
EXAMPLESC	src/dm/impls/mesh/examples/tests/makefile	/^EXAMPLESC       = ex00.c ex01.c ex02.c ex03.c ex1.c$/;"	m
EXAMPLESC	src/dm/impls/mesh/examples/tutorials/makefile	/^EXAMPLESC       = ex1.c ex10.cxx ex12.cxx$/;"	m
EXAMPLESC	src/dm/impls/moab/examples/tests/makefile	/^EXAMPLESC       = ex1.cxx$/;"	m
EXAMPLESC	src/dm/impls/plex/examples/tests/makefile	/^EXAMPLESC       = ex1.c$/;"	m
EXAMPLESF	src/dm/dt/examples/tests/makefile	/^EXAMPLESF       =$/;"	m
EXAMPLESF	src/dm/impls/mesh/examples/tests/makefile	/^EXAMPLESF       =$/;"	m
EXAMPLESF	src/dm/impls/mesh/examples/tutorials/makefile	/^EXAMPLESF       = ex12f90.F90 mex12f90.F90$/;"	m
EXAMPLESF	src/dm/impls/moab/examples/tests/makefile	/^EXAMPLESF       =$/;"	m
EXAMPLESF	src/dm/impls/plex/examples/tests/makefile	/^EXAMPLESF       = ex1f90.F ex2f90.F$/;"	m
EXOGetElemType	src/dm/impls/mesh/examples/tests/TestMeshExodus.c	/^PetscErrorCode EXOGetElemType(const char *name,EXO_ELEM_TYPE *elem_type)$/;"	f
EXO_ELEM_TYPE	src/dm/impls/mesh/examples/tests/TestMeshExodus.c	/^} EXO_ELEM_TYPE;$/;"	t	typeref:enum:__anon12	file:
EXO_HEX	src/dm/impls/mesh/examples/tests/TestMeshExodus.c	/^  EXO_HEX$/;"	e	enum:__anon12	file:
EXO_QUAD	src/dm/impls/mesh/examples/tests/TestMeshExodus.c	/^  EXO_QUAD,$/;"	e	enum:__anon12	file:
EXO_TET	src/dm/impls/mesh/examples/tests/TestMeshExodus.c	/^  EXO_TET,$/;"	e	enum:__anon12	file:
EXO_TRI	src/dm/impls/mesh/examples/tests/TestMeshExodus.c	/^  EXO_TRI,$/;"	e	enum:__anon12	file:
EXTERN_C_BEGIN	include/petscsys.h	1819;"	d
EXTERN_C_BEGIN	include/petscsys.h	1822;"	d
EXTERN_C_END	include/petscsys.h	1820;"	d
EXTERN_C_END	include/petscsys.h	1823;"	d
EXTRA_ARGS	src/dm/impls/mesh/examples/tests/makefile	/^EXTRA_ARGS      =$/;"	m
EXTRA_ARGS	src/dm/impls/mesh/examples/tutorials/makefile	/^EXTRA_ARGS      = -mesh_view_vtk  -mat_type umfpack -pc_type lu$/;"	m
EasyGuiRevisionInfo	bin/TOPSInstaller.py	/^EasyGuiRevisionInfo = " version 0.72 2004-06-20"$/;"	v
Edge	src/dm/impls/mesh/examples/tests/refinementTest.cxx	/^  Edge() : std::pair<Point, Point>() {};$/;"	f	class:Edge
Edge	src/dm/impls/mesh/examples/tests/refinementTest.cxx	/^  Edge(const Point l) : std::pair<Point, Point>(l, l) {};$/;"	f	class:Edge
Edge	src/dm/impls/mesh/examples/tests/refinementTest.cxx	/^  Edge(const Point l, const Point r) : std::pair<Point, Point>(l, r) {};$/;"	f	class:Edge
Edge	src/dm/impls/mesh/examples/tests/refinementTest.cxx	/^class Edge : public std::pair<Point, Point> {$/;"	c	file:
EdgesIntersect	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^bool HierarchyBuilder::EdgesIntersect(double * aCoords, double * bCoords)$/;"	f	class:ALE::Hierarchy::HierarchyBuilder
ElementCorners	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^void HierarchyBuilder::ElementCorners(double * buffer, patch_type aPatch, point_type aTriangle)$/;"	f	class:ALE::Hierarchy::HierarchyBuilder
Equality	config/PETSc/FEM.py	/^    from Cxx import Equality$/;"	i
Event	include/petsclog.hh	/^    static LogEvent& Event(const std::string& name, PetscClassId classid = PETSC_OBJECT_CLASSID) {$/;"	f	class:PETSc::Log
Exception	include/petscsys.hh	/^    Exception() : std::exception() {}$/;"	f	class:PETSc::Exception
Exception	include/petscsys.hh	/^    Exception(const Exception& e) : std::exception() {this->_txt << e._txt.str();}$/;"	f	class:PETSc::Exception
Exception	include/petscsys.hh	/^    explicit Exception(const std::ostringstream& txt) : std::exception() {this->_txt << txt.str();}$/;"	f	class:PETSc::Exception
Exception	include/petscsys.hh	/^    explicit Exception(const std::string& msg) : std::exception() {this->_txt << msg;}$/;"	f	class:PETSc::Exception
Exception	include/petscsys.hh	/^  class Exception : public std::exception {$/;"	c	namespace:PETSc
Exception	include/sieve/ALE_exception.hh	/^    Exception(const Exception& e)      : std::runtime_error(e.what()) {};$/;"	f	class:ALE::Exception
Exception	include/sieve/ALE_exception.hh	/^    explicit Exception(const char         * msg) : std::runtime_error(msg){};$/;"	f	class:ALE::Exception
Exception	include/sieve/ALE_exception.hh	/^    explicit Exception(const ostringstream& txt) : std::runtime_error(txt.str()){};$/;"	f	class:ALE::Exception
Exception	include/sieve/ALE_exception.hh	/^    explicit Exception(const string&        msg) : std::runtime_error(msg){};$/;"	f	class:ALE::Exception
Exception	include/sieve/ALE_exception.hh	/^  class Exception : public std::runtime_error {$/;"	c	namespace:ALE
ExpandInterval	src/dm/impls/mesh/mesh.c	/^inline void ExpandInterval(const ALE::Point& interval, int indices[], int& indx)$/;"	f
ExpandInterval_New	src/dm/impls/mesh/mesh.c	/^inline void ExpandInterval_New(ALE::Point interval, PetscInt indices[], PetscInt *indx)$/;"	f
ExtensionFileSet	config/BuildSystem/build/fileset.py	/^class ExtensionFileSet (TreeFileSet):$/;"	c
FEM	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^import PETSc.FEM$/;"	i
FEM	bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py	/^import PETSc.FEM$/;"	i
FEMSection	include/sieve/Field.hh	/^    FEMSection(MPI_Comm comm, const int debug = 0) : ParallelObject(comm, debug) {$/;"	f	class:ALE::FEMSection
FEMSection	include/sieve/Field.hh	/^    FEMSection(const Obj<atlas_type>& atlas) : ParallelObject(atlas->comm(), atlas->debug()), _atlas(atlas), _array(NULL), _sharedStorage(false), _sharedStorageSize(0) {$/;"	f	class:ALE::FEMSection
FEMSection	include/sieve/Field.hh	/^  class FEMSection : public ALE::ParallelObject {$/;"	c	namespace:ALE
FFC	config/PETSc/packages/FFC.py	/^        import FFC$/;"	i
FFC	config/PETSc/packages/FFC.py	/^        self.framework.logPrint('ERROR: Could not import FFC: '+str(e))$/;"	i
FFLAGS	include/finclude/makefile	/^FFLAGS    =$/;"	m
FFLAGS	include/makefile	/^FFLAGS   =$/;"	m
FFLAGS	include/petsc-private/makefile	/^FFLAGS   =$/;"	m
FFLAGS	include/sieve/makefile	/^FFLAGS   =$/;"	m
FFLAGS	interfaces/lua/makefile	/^FFLAGS    =$/;"	m
FFLAGS	interfaces/lua/src/makefile	/^FFLAGS    =$/;"	m
FFLAGS	interfaces/makefile	/^FFLAGS    =$/;"	m
FFLAGS	src/dm/dt/examples/tests/makefile	/^FFLAGS	        =$/;"	m
FFLAGS	src/dm/dt/interface/makefile	/^FFLAGS   =$/;"	m
FFLAGS	src/dm/impls/mesh/examples/tests/makefile	/^FFLAGS	        =$/;"	m
FFLAGS	src/dm/impls/mesh/examples/tutorials/makefile	/^FFLAGS	        =$/;"	m
FFLAGS	src/dm/impls/mesh/f90-custom/makefile	/^FFLAGS   =$/;"	m
FFLAGS	src/dm/impls/mesh/ftn-custom/makefile	/^FFLAGS   =$/;"	m
FFLAGS	src/dm/impls/mesh/makefile	/^FFLAGS   =$/;"	m
FFLAGS	src/dm/impls/moab/examples/tests/makefile	/^FFLAGS	        =$/;"	m
FFLAGS	src/dm/impls/moab/makefile	/^FFLAGS   =$/;"	m
FFLAGS	src/dm/impls/plex/examples/tests/makefile	/^FFLAGS	        =$/;"	m
FFLAGS	src/dm/impls/plex/f90-custom/makefile	/^FFLAGS   =$/;"	m
FFLAGS	src/dm/impls/plex/ftn-custom/makefile	/^FFLAGS   =$/;"	m
FIAT	config/BuildSystem/config/packages/fiat.py	/^        import FIAT$/;"	i
FIAT	config/BuildSystem/config/packages/fiat.py	/^        import FIAT.lagrange$/;"	i
FIAT	config/BuildSystem/config/packages/fiat.py	/^        import FIAT.quadrature$/;"	i
FIAT	config/BuildSystem/config/packages/fiat.py	/^        self.framework.logPrint('ERROR: Could not import FIAT: '+str(e))$/;"	i
FIAT	config/PETSc/FEM.py	/^    import FIAT.functional$/;"	i
FIAT	config/PETSc/FEM.py	/^    import FIAT.quadrature$/;"	i
FILE_MODE_APPEND	include/petscsys.h	/^typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;$/;"	e	enum:__anon27
FILE_MODE_APPEND_UPDATE	include/petscsys.h	/^typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;$/;"	e	enum:__anon27
FILE_MODE_READ	include/petscsys.h	/^typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;$/;"	e	enum:__anon27
FILE_MODE_UPDATE	include/petscsys.h	/^typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;$/;"	e	enum:__anon27
FILE_MODE_WRITE	include/petscsys.h	/^typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;$/;"	e	enum:__anon27
FIXCHAR	include/petsc-private/fortranimpl.h	56;"	d
FIXRETURNCHAR	include/petsc-private/fortranimpl.h	72;"	d
FORTRANNULLBOOL	include/petsc-private/fortranimpl.h	84;"	d
FORTRANNULLDOUBLE	include/petsc-private/fortranimpl.h	81;"	d
FORTRANNULLFUNCTION	include/petsc-private/fortranimpl.h	85;"	d
FORTRANNULLINTEGER	include/petsc-private/fortranimpl.h	79;"	d
FORTRANNULLOBJECT	include/petsc-private/fortranimpl.h	83;"	d
FORTRANNULLREAL	include/petsc-private/fortranimpl.h	82;"	d
FORTRANNULLSCALAR	include/petsc-private/fortranimpl.h	80;"	d
FPPFLAGS	src/dm/dt/examples/tests/makefile	/^FPPFLAGS        =$/;"	m
FPPFLAGS	src/dm/impls/mesh/examples/tests/makefile	/^FPPFLAGS        =$/;"	m
FPPFLAGS	src/dm/impls/mesh/examples/tutorials/makefile	/^FPPFLAGS        =$/;"	m
FPPFLAGS	src/dm/impls/moab/examples/tests/makefile	/^FPPFLAGS        =$/;"	m
FPPFLAGS	src/dm/impls/plex/examples/tests/makefile	/^FPPFLAGS        =$/;"	m
FREECHAR	include/petsc-private/fortranimpl.h	70;"	d
FaceInserter	include/sieve/Selection.hh	/^      FaceInserter(const Obj<mesh_type>& mesh, const Obj<sieve_type>& sieve, const Obj<sieve_type>& subSieve, point_type& f, const point_type& cell, const int numCorners, int indices[], PointArray *origVertices, PointArray *faceVertices, PointSet *subCells) : mesh(mesh), sieve(sieve), subSieve(subSieve), f(f), cell(cell), numCorners(numCorners), indices(indices), origVertices(origVertices), faceVertices(faceVertices), subCells(subCells), debug(mesh->debug()) {};$/;"	f	class:ALE::Selection::FaceInserter
FaceInserter	include/sieve/Selection.hh	/^    class FaceInserter {$/;"	c	class:ALE::Selection
FaceInserterV	include/sieve/Selection.hh	/^      FaceInserterV(const Obj<mesh_type>& mesh, const Obj<sieve_type>& sieve, const Obj<Sieve>& subSieve, point_type& f, const point_type& cell, const int numCorners, int indices[], PointArray *origVertices, PointArray *faceVertices, PointSet *subCells) : mesh(mesh), sieve(sieve), subSieve(subSieve), f(f), cell(cell), numCorners(numCorners), indices(indices), origVertices(origVertices), faceVertices(faceVertices), subCells(subCells), debug(mesh->debug()) {};$/;"	f	class:ALE::Selection::FaceInserterV
FaceInserterV	include/sieve/Selection.hh	/^    class FaceInserterV {$/;"	c	class:ALE::Selection
FaceRecognizer	include/sieve/Partitioner.hh	/^      FaceRecognizer(Mesh& mesh, const int debug = 0) : numCases(0) {$/;"	f	class:ALE::Partitioner::FaceRecognizer
FaceRecognizer	include/sieve/Partitioner.hh	/^    class FaceRecognizer {$/;"	c	class:ALE::Partitioner
FaceVisitor	include/sieve/Selection.hh	/^      FaceVisitor(FaceType& f, PointArray& oV, PointArray& fV, int *i, const int debug) : face(f), origVertices(oV), faceVertices(fV), indices(i), debug(debug), oppositeVertex(-1), v(0) {};$/;"	f	class:ALE::Selection::FaceVisitor
FaceVisitor	include/sieve/Selection.hh	/^    class FaceVisitor {$/;"	c	class:ALE::Selection
FactorShiftCtx	include/petsc-private/matimpl.h	/^} FactorShiftCtx;$/;"	t	typeref:struct:__anon4
FauxConstantSection	include/sieve/Field.hh	/^    FauxConstantSection(MPI_Comm comm, const int debug = 0) : ParallelObject(comm, debug) {};$/;"	f	class:ALE::FauxConstantSection
FauxConstantSection	include/sieve/Field.hh	/^    FauxConstantSection(MPI_Comm comm, const value_type& value, const int debug) : ParallelObject(comm, debug), _value(value) {};$/;"	f	class:ALE::FauxConstantSection
FauxConstantSection	include/sieve/Field.hh	/^  class FauxConstantSection : public ALE::ParallelObject {$/;"	c	namespace:ALE
FetchAndOpBegin	include/petsc-private/sfimpl.h	/^  PetscErrorCode (*FetchAndOpBegin)(PetscSF,MPI_Datatype,void*,const void*,void*,MPI_Op);$/;"	m	struct:_PetscSFOps
FetchAndOpEnd	include/petsc-private/sfimpl.h	/^  PetscErrorCode (*FetchAndOpEnd)(PetscSF,MPI_Datatype,void*,const void *,void *,MPI_Op);$/;"	m	struct:_PetscSFOps
Field	include/sieve/Field.hh	/^    Field(MPI_Comm comm, const int debug = 0) : ParallelObject(comm, debug) {$/;"	f	class:ALE::Field
Field	include/sieve/Field.hh	/^    Field(MPI_Comm comm, const int tag, const int debug) : ParallelObject(comm, debug), _tag(tag) {$/;"	f	class:ALE::Field
Field	include/sieve/Field.hh	/^  class Field : public ALE::ParallelObject {$/;"	c	namespace:ALE
FileBrowser	config/BuildSystem/nargs.py	/^        import GUI.FileBrowser$/;"	i
FileChanged	config/BuildSystem/build/fileState.py	/^class FileChanged (build.transform.Transform):$/;"	c
FileSet	config/BuildSystem/build/fileset.py	/^class FileSet(list):$/;"	c
FileSetIterator	config/BuildSystem/build/fileset.py	/^class FileSetIterator (object):$/;"	c
FileSetMode	bin/matlab/classes/PetscViewer.m.html	/^    function FileSetMode(obj,mode)$/;"	f
FileSetName	bin/matlab/classes/PetscViewer.m.html	/^    function FileSetName(obj,name)$/;"	f
FileType	src/dm/impls/mesh/examples/tutorials/ex1.c	/^typedef enum {PCICE} FileType;$/;"	t	typeref:enum:__anon5	file:
Filter	config/BuildSystem/build/transform.py	/^class Filter (Transform):$/;"	c
FilteredPointRetriever	include/sieve/ISieve.hh	/^      FilteredPointRetriever(const Set& s, Renumbering& r, const size_t size) : pointSet(s), renumbering(r), size(size), i(0), o(0), renumber(true) {$/;"	f	class:ALE::ISieveVisitor::FilteredPointRetriever
FilteredPointRetriever	include/sieve/ISieve.hh	/^    class FilteredPointRetriever {$/;"	c	namespace:ALE::ISieveVisitor
FlexMesh	include/sieve/Selection.hh	/^    typedef ALE::Mesh<PetscInt,PetscScalar>      FlexMesh;$/;"	t	class:ALE::Selection
For	config/builder.py	/^from __future__ import with_statement  # For python-2.5$/;"	i
FortranMPICheck	config/BuildSystem/config/packages/MPI.py	/^  def FortranMPICheck(self):$/;"	m	class:Configure
Framework	config/BuildSystem/build/framework.py	/^class Framework(base.Base):$/;"	c
Framework	config/BuildSystem/config/framework.py	/^class Framework(config.base.Configure, script.LanguageProcessor):$/;"	c
FrameworkTest	config/BuildSystem/config/regression/frameworkTest.py	/^class FrameworkTest (unittest.TestCase):$/;"	c
Frhs	include/petsc-private/tsimpl.h	/^  Vec Frhs;     \/* Right hand side function value *\/$/;"	m	struct:_p_TS
FullAssemblyTest	src/dm/impls/mesh/examples/tests/operator1.cxx	/^PetscErrorCode FullAssemblyTest(const Obj<ALE::Mesh>& m, Options *options)$/;"	f
Function	config/PETSc/FEM.py	/^    from Cxx import Break, CompoundStatement, Function, Pointer, Switch$/;"	i
Function	config/PETSc/FEM.py	/^    from Cxx import Function$/;"	i
FunctionCall	config/PETSc/FEM.py	/^    from Cxx import FunctionCall$/;"	i
FunctionTestDistribution	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^class FunctionTestDistribution : public CppUnit::TestFixture$/;"	c	file:
FunctionTestHatSieve	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^class FunctionTestHatSieve : public CppUnit::TestFixture$/;"	c	file:
FunctionTestIDistribution	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^class FunctionTestIDistribution : public CppUnit::TestFixture$/;"	c	file:
FunctionTestIMesh	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^class FunctionTestIMesh : public CppUnit::TestFixture$/;"	c	file:
FunctionTestISieve	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^class FunctionTestISieve : public CppUnit::TestFixture$/;"	c	file:
Functions	config/BuildSystem/config/packages/scientificpython.py	/^        import Scientific.Functions.Derivatives$/;"	i
Future	config/builder.py	/^class Future(logger.Logger):$/;"	c
GIT	config/BuildSystem/patch.py	/^GIT = "git"$/;"	v
GNUPackage	config/BuildSystem/config/package.py	/^class GNUPackage(Package):$/;"	c
GUI	config/BuildSystem/nargs.py	/^        import GUI.FileBrowser$/;"	i
GeneralBoundaryCondition	include/sieve/FEMProblem.hh	/^      GeneralBoundaryCondition(MPI_Comm comm, const int debug = 0) : ParallelObject(comm, debug) {};$/;"	f	class:ALE::Problem::GeneralBoundaryCondition
GeneralBoundaryCondition	include/sieve/FEMProblem.hh	/^    class GeneralBoundaryCondition : ParallelObject {$/;"	c	namespace:ALE::Problem
GeneralDiscretization	include/sieve/FEMProblem.hh	/^      GeneralDiscretization(MPI_Comm comm, const int debug = 0) : ParallelObject(comm, debug), _quadSize(0), _basisSize(0), _indices(NULL) {};$/;"	f	class:ALE::Problem::GeneralDiscretization
GeneralDiscretization	include/sieve/FEMProblem.hh	/^    class GeneralDiscretization : ParallelObject { \/\/this should largely resemble the old form of the discretizations, only with specifics of evaluation to FIAT removed.$/;"	c	namespace:ALE::Problem
GeneralIntegral	include/sieve/FEMProblem.hh	/^      GeneralIntegral (MPI_Comm comm, int debug = 0) : ParallelObject(comm, debug) {$/;"	f	class:ALE::Problem::GeneralIntegral
GeneralIntegral	include/sieve/FEMProblem.hh	/^      GeneralIntegral (MPI_Comm comm, name_type labelname, int labelmarker, int nCoefficients = 0, int debug = 0) : ParallelObject(comm, debug) {$/;"	f	class:ALE::Problem::GeneralIntegral
GeneralIntegral	include/sieve/FEMProblem.hh	/^    class GeneralIntegral : public ParallelObject {$/;"	c	namespace:ALE::Problem
GeneralSection	include/sieve/Field.hh	/^    GeneralSection(MPI_Comm comm, const int debug = 0) : ParallelObject(comm, debug) {$/;"	f	class:ALE::GeneralSection
GeneralSection	include/sieve/Field.hh	/^    GeneralSection(const Obj<atlas_type>& atlas) : ParallelObject(atlas->comm(), atlas->debug()), _atlas(atlas), _atlasNew(NULL), _array(NULL), _sharedStorage(false), _sharedStorageSize(0) {$/;"	f	class:ALE::GeneralSection
GeneralSection	include/sieve/Field.hh	/^  class GeneralSection : public ALE::ParallelObject {$/;"	c	namespace:ALE
GeneralSectionTest	src/dm/impls/mesh/examples/tests/section1-old.cxx	/^PetscErrorCode GeneralSectionTest(const Obj<topology_type>& topology, Options *options)$/;"	f
GeneralSectionTest	src/dm/impls/mesh/examples/tests/section2.cxx	/^PetscErrorCode GeneralSectionTest(MPI_Comm comm, Options *options)$/;"	f
GenerateMesh	src/dm/impls/mesh/examples/tutorials/ex_coarsen.h	/^PetscErrorCode GenerateMesh(MPI_Comm comm, Obj<ALE::Mesh>& mesh, double ref_lim)$/;"	f
Generator	config/PETSc/packages/Generator.py	/^        self.framework.logPrint('ERROR: Could not import Generator: '+str(e))$/;"	i
Generator	include/sieve/Generator.hh	/^    class Generator {$/;"	c	namespace:ALE::TetGen
Generator	include/sieve/Generator.hh	/^    class Generator {$/;"	c	namespace:ALE::Triangle
Generator	include/sieve/Generator.hh	/^  class Generator {$/;"	c	namespace:ALE
GenericFormSubProblem	include/sieve/FEMProblem.hh	/^      GenericFormSubProblem(MPI_Comm comm, int debug = 1) : SubProblem(comm, debug) {};$/;"	f	class:ALE::Problem::GenericFormSubProblem
GenericFormSubProblem	include/sieve/FEMProblem.hh	/^    class GenericFormSubProblem : SubProblem { \/\/takes information from some abstract notion of a problem and sets up the thing.$/;"	c	namespace:ALE::Problem
GenericTag	config/BuildSystem/build/fileState.py	/^class GenericTag (FileChanged):$/;"	c
GeometryTest	src/dm/impls/mesh/examples/tests/mesh1.cxx	/^PetscErrorCode GeometryTest(const Obj<ALE::Mesh>& mesh, const Obj<section_type>& coordinates, Options *options)$/;"	f
GetAdjacentDof_Private	src/dm/impls/mesh/mesh.c	/^PetscErrorCode GetAdjacentDof_Private()$/;"	f
GetLocalInterpolation	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^PetscErrorCode HierarchyBuilder::GetLocalInterpolation(double * coeffs, point_type v, point_type e)$/;"	f	class:ALE::Hierarchy::HierarchyBuilder
GlobalOrder	include/sieve/Numbering.hh	/^    GlobalOrder(MPI_Comm comm, const int debug = 0) : UniformSection<Point_, Value_>(comm, debug), _localSize(0) {$/;"	f	class:ALE::GlobalOrder
GlobalOrder	include/sieve/Numbering.hh	/^  class GlobalOrder : public UniformSection<Point_, Value_> {$/;"	c	namespace:ALE
HTML	include/web/AMSOptions.py	/^from pyjamas.ui.HTML import HTML$/;"	i
HTML	include/web/AMSSnoopObjects.py	/^from pyjamas.ui.HTML import HTML$/;"	i
HTML	include/web/AMSSnoopStack.py	/^from pyjamas.ui.HTML import HTML$/;"	i
HTTPConnection	bin/urlget.py	/^    from http.client import HTTPConnection$/;"	i
HTTPConnection	bin/urlget.py	/^    from httplib import HTTPConnection$/;"	i
Header	config/PETSc/FEM.py	/^    from Cxx import Header$/;"	i
HeightVisitor	include/sieve/Mesh.hh	/^      HeightVisitor(const sieve_type& s, label_type& h) : sieve(s), height(h), maxHeight(0) {};$/;"	f	class:ALE::IBundle::HeightVisitor
HeightVisitor	include/sieve/Mesh.hh	/^    class HeightVisitor {$/;"	c	class:ALE::IBundle
Help	config/BuildSystem/help.py	/^class Help(Info):$/;"	c
Hierarchy	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^namespace Hierarchy {$/;"	n	namespace:ALE
HierarchyBuilder	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^HierarchyBuilder::HierarchyBuilder(Obj<ALE::Mesh> m, int dimensions, int levels, double C)$/;"	f	class:ALE::Hierarchy::HierarchyBuilder
HierarchyBuilder	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^class HierarchyBuilder {$/;"	c	namespace:ALE::Hierarchy
HorizontalPanel	include/web/AMSOptions.py	/^from pyjamas.ui.HorizontalPanel import HorizontalPanel$/;"	i
HorizontalPanel	include/web/AMSSnoopObjects.py	/^from pyjamas.ui.HorizontalPanel import HorizontalPanel$/;"	i
HorizontalPanel	include/web/AMSSnoopStack.py	/^from pyjamas.ui.HorizontalPanel import HorizontalPanel$/;"	i
Hunk	config/BuildSystem/patch.py	/^class Hunk(object):$/;"	c
IBundle	include/sieve/Mesh.hh	/^    IBundle(MPI_Comm comm, int debug = 0) : ALE::ParallelObject(comm, debug), _maxHeight(-1), _maxDepth(-1) {$/;"	f	class:ALE::IBundle
IBundle	include/sieve/Mesh.hh	/^    IBundle(const Obj<sieve_type>& sieve) : ALE::ParallelObject(sieve->comm(), sieve->debug()), _sieve(sieve), _maxHeight(-1), _maxDepth(-1) {$/;"	f	class:ALE::IBundle
IBundle	include/sieve/Mesh.hh	/^  class IBundle : public ALE::ParallelObject {$/;"	c	namespace:ALE
IConstantSection	include/sieve/IField.hh	/^    IConstantSection(MPI_Comm comm, const int debug = 0) : ParallelObject(comm, debug) {$/;"	f	class:ALE::IConstantSection
IConstantSection	include/sieve/IField.hh	/^    IConstantSection(MPI_Comm comm, const point_type& min, const point_type& max, const value_type& value, const int debug) : ParallelObject(comm, debug), _chart(min, max) {$/;"	f	class:ALE::IConstantSection
IConstantSection	include/sieve/IField.hh	/^    IConstantSection(MPI_Comm comm, const point_type& min, const point_type& max, const value_type& value, const value_type& defaultValue, const int debug) : ParallelObject(comm, debug), _chart(min, max) {$/;"	f	class:ALE::IConstantSection
IConstantSection	include/sieve/IField.hh	/^  class IConstantSection : public ALE::ParallelObject {$/;"	c	namespace:ALE
IFSieve	include/sieve/ISieve.hh	/^    IFSieve(const MPI_Comm comm, const int debug = 0) : ParallelObject(comm, debug), indexAllocated(false), coneOffsets(NULL), supportOffsets(NULL), pointAllocated(false), maxConeSize(-1), maxSupportSize(-1), baseSize(-1), capSize(-1), cones(NULL), supports(NULL), orientCones(true), coneOrientations(NULL) {$/;"	f	class:ALE::IFSieve
IFSieve	include/sieve/ISieve.hh	/^    IFSieve(const MPI_Comm comm, const point_type& min, const point_type& max, const int debug = 0) : ParallelObject(comm, debug), indexAllocated(false), coneOffsets(NULL), supportOffsets(NULL), pointAllocated(false), maxConeSize(-1), maxSupportSize(-1), baseSize(-1), capSize(-1), cones(NULL), supports(NULL), orientCones(true), coneOrientations(NULL) {$/;"	f	class:ALE::IFSieve
IFSieve	include/sieve/ISieve.hh	/^  class IFSieve : public ParallelObject {$/;"	c	namespace:ALE
IFSieveDef	include/sieve/ISieve.hh	/^  namespace IFSieveDef {$/;"	n	namespace:ALE
IGeneralSection	include/sieve/IField.hh	/^    IGeneralSection(MPI_Comm comm, const int debug = 0) : GeneralSection<Point_, Value_, Alloc_, IUniformSection<Point_, Point, 1, typename Alloc_::template rebind<Point>::other>, ISection<Point_, int, typename Alloc_::template rebind<int>::other> >(comm, debug) {};$/;"	f	class:ALE::IGeneralSection
IGeneralSection	include/sieve/IField.hh	/^    IGeneralSection(MPI_Comm comm, const point_type& min, const point_type& max, const int debug = 0) : GeneralSection<Point_, Value_, Alloc_, IUniformSection<Point_, Point, 1, typename Alloc_::template rebind<Point>::other>, ISection<Point_, int, typename Alloc_::template rebind<int>::other> >(comm, debug) {$/;"	f	class:ALE::IGeneralSection
IGeneralSection	include/sieve/IField.hh	/^    IGeneralSection(const Obj<atlas_type>& atlas) : GeneralSection<Point_, Value_, Alloc_, IUniformSection<Point_, Point, 1, typename Alloc_::template rebind<Point>::other>, ISection<Point_, int, typename Alloc_::template rebind<int>::other> >(atlas) {$/;"	f	class:ALE::IGeneralSection
IGeneralSection	include/sieve/IField.hh	/^  class IGeneralSection : public GeneralSection<Point_, Value_, Alloc_, IUniformSection<Point_, Point, 1, typename Alloc_::template rebind<Point>::other>, ISection<Point_, int, typename Alloc_::template rebind<int>::other> > {$/;"	c	namespace:ALE
IGlobalOrder	include/sieve/INumbering.hh	/^    IGlobalOrder(MPI_Comm comm, const int debug = 0) : IUniformSection<Point_, Value_, 1, Alloc_>(comm, debug), _localSize(0) {$/;"	f	class:ALE::IGlobalOrder
IGlobalOrder	include/sieve/INumbering.hh	/^  class IGlobalOrder : public IUniformSection<Point_, Value_, 1, Alloc_> {$/;"	c	namespace:ALE
IMesh	include/sieve/Mesh.hh	/^    IMesh(MPI_Comm comm, int dim, int debug = 0) : base_type(comm, debug), _dim(dim) {$/;"	f	class:ALE::IMesh
IMesh	include/sieve/Mesh.hh	/^  class IMesh : public IBundle<IFSieve<IndexType>, IGeneralSection<IndexType, ScalarType>, IGeneralSection<IndexType, IndexType>,  Label_> {$/;"	c	namespace:ALE
INERTIAL_METHOD	include/sieve/Partitioner.hh	/^      enum {DEFAULT_METHOD = 1, INERTIAL_METHOD = 3};$/;"	e	enum:ALE::Chaco::Partitioner::__anon8
INSERT_ALL_VALUES	include/petscsys.h	/^ typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES, INSERT_BC_VALUES, ADD_BC_VALUES} InsertMode;$/;"	e	enum:__anon31
INSERT_BC_VALUES	include/petscsys.h	/^ typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES, INSERT_BC_VALUES, ADD_BC_VALUES} InsertMode;$/;"	e	enum:__anon31
INSERT_VALUES	include/petscsys.h	/^ typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES, INSERT_BC_VALUES, ADD_BC_VALUES} InsertMode;$/;"	e	enum:__anon31
INSIDE_CELLS	include/petscdmmesh_formats.hh	/^      enum ParserState {OUTSIDE, INSIDE_MESH, INSIDE_VERTICES, INSIDE_CELLS, DONE};$/;"	e	enum:ALE::Dolfin::XMLMesh::ParserState
INSIDE_MESH	include/petscdmmesh_formats.hh	/^      enum ParserState {OUTSIDE, INSIDE_MESH, INSIDE_VERTICES, INSIDE_CELLS, DONE};$/;"	e	enum:ALE::Dolfin::XMLMesh::ParserState
INSIDE_VERTICES	include/petscdmmesh_formats.hh	/^      enum ParserState {OUTSIDE, INSIDE_MESH, INSIDE_VERTICES, INSIDE_CELLS, DONE};$/;"	e	enum:ALE::Dolfin::XMLMesh::ParserState
INumbering	include/sieve/INumbering.hh	/^    INumbering(MPI_Comm comm, const int debug = 0) : IUniformSection<Point_, Value_, 1, Alloc_>(comm, debug), _localSize(0) {$/;"	f	class:ALE::INumbering
INumbering	include/sieve/INumbering.hh	/^  class INumbering : public IUniformSection<Point_, Value_, 1, Alloc_> {$/;"	c	namespace:ALE
INumberingFactory	include/sieve/INumbering.hh	/^    INumberingFactory(MPI_Comm comm, const int debug = 0) : ALE::ParallelObject(comm, debug), _unknownNumber(-1), _unknownOrder(-1, 0) {};$/;"	f	class:ALE::INumberingFactory
INumberingFactory	include/sieve/INumbering.hh	/^  class INumberingFactory : public ALE::ParallelObject {$/;"	c	namespace:ALE
IS	bin/matlab/classes/matlabheader.h	/^typedef PetscPointer IS;$/;"	t
IS	bin/pythonscripts/PetscBinaryIO.py	/^class IS(np.ndarray):$/;"	c
IS	include/finclude/petscisdef.h	11;"	d
IS	include/petscis.h	/^typedef struct _p_IS* IS;$/;"	t	typeref:struct:_p_IS
ISBLOCK	include/finclude/petscisdef.h	26;"	d
ISBLOCK	include/petscis.h	37;"	d
ISColoring	include/finclude/petscisdef.h	12;"	d
ISColoring	include/petscis.h	/^typedef struct _n_ISColoring* ISColoring;$/;"	t	typeref:struct:_n_ISColoring
ISColoringType	include/finclude/petscisdef.h	22;"	d
ISColoringType	include/petscis.h	/^typedef enum {IS_COLORING_GLOBAL,IS_COLORING_GHOSTED} ISColoringType;$/;"	t	typeref:enum:__anon83
ISColoringTypes	include/petscis.h	/^PETSC_EXTERN const char *const ISColoringTypes[];$/;"	v
ISColoringValue	include/petscis.h	/^typedef unsigned PETSC_IS_COLOR_VALUE_TYPE ISColoringValue;$/;"	t
ISGENERAL	include/finclude/petscisdef.h	24;"	d
ISGENERAL	include/petscis.h	35;"	d
ISGlobalToLocalMappingType	include/finclude/petscisdef.h	21;"	d
ISGlobalToLocalMappingType	include/petscis.h	/^typedef enum {IS_GTOLM_MASK,IS_GTOLM_DROP} ISGlobalToLocalMappingType;$/;"	t	typeref:enum:__anon82
ISList	include/petscis.h	/^PETSC_EXTERN PetscFunctionList ISList;$/;"	v
ISLocalToGlobalMapping	include/finclude/petscisdef.h	20;"	d
ISLocalToGlobalMapping	include/petscis.h	/^typedef struct _p_ISLocalToGlobalMapping* ISLocalToGlobalMapping;$/;"	t	typeref:struct:_p_ISLocalToGlobalMapping
ISRegisterAllCalled	include/petscis.h	/^PETSC_EXTERN PetscBool         ISRegisterAllCalled;$/;"	v
ISSTRIDE	include/finclude/petscisdef.h	25;"	d
ISSTRIDE	include/petscis.h	36;"	d
ISType	include/finclude/petscisdef.h	19;"	d
ISType	include/petscis.h	/^typedef const char* ISType;$/;"	t
IS_A_FLAG	include/sieve/ALE_args.hh	/^    Arg& IS_A_FLAG() { \/\/ no value expected$/;"	f	struct:ALE::Arg
IS_A_LIST	include/sieve/ALE_args.hh	/^    Arg& IS_A_LIST() {\/\/ multiple tokens per value$/;"	f	struct:ALE::Arg
IS_CLASSID	include/petscis.h	/^PETSC_EXTERN PetscClassId IS_CLASSID;$/;"	v
IS_COLORING_GHOSTED	include/petscis.h	/^typedef enum {IS_COLORING_GLOBAL,IS_COLORING_GHOSTED} ISColoringType;$/;"	e	enum:__anon83
IS_COLORING_GLOBAL	include/petscis.h	/^typedef enum {IS_COLORING_GLOBAL,IS_COLORING_GHOSTED} ISColoringType;$/;"	e	enum:__anon83
IS_FILE_CLASSID	include/petscis.h	11;"	d
IS_GTOLM_DROP	include/petscis.h	/^typedef enum {IS_GTOLM_MASK,IS_GTOLM_DROP} ISGlobalToLocalMappingType;$/;"	e	enum:__anon82
IS_GTOLM_MASK	include/petscis.h	/^typedef enum {IS_GTOLM_MASK,IS_GTOLM_DROP} ISGlobalToLocalMappingType;$/;"	e	enum:__anon82
IS_LTOGM_CLASSID	include/petscis.h	/^PETSC_EXTERN PetscClassId IS_LTOGM_CLASSID;$/;"	v
IS_MULTIPLACED	include/sieve/ALE_args.hh	/^    Arg& IS_MULTIPLACED() {\/\/ may be defined in multiple places on the command line$/;"	f	struct:ALE::Arg
ISection	include/sieve/IField.hh	/^    ISection(MPI_Comm comm, const int debug = 0) : Section<Point_, Value_, Alloc_, IUniformSection<Point_, Point, 1, typename Alloc_::template rebind<Point>::other> >(comm, debug) {$/;"	f	class:ALE::ISection
ISection	include/sieve/IField.hh	/^    ISection(MPI_Comm comm, const point_type& min, const point_type& max, const int debug = 0) : Section<Point_, Value_, Alloc_, IUniformSection<Point_, Point, 1, typename Alloc_::template rebind<Point>::other> >(comm, debug) {$/;"	f	class:ALE::ISection
ISection	include/sieve/IField.hh	/^    ISection(const Obj<atlas_type>& atlas) : Section<Point_, Value_, Alloc_, IUniformSection<Point_, Point, 1, typename Alloc_::template rebind<Point>::other> >(atlas) {};$/;"	f	class:ALE::ISection
ISection	include/sieve/IField.hh	/^  class ISection : public Section<Point_, Value_, Alloc_, IUniformSection<Point_, Point, 1, typename Alloc_::template rebind<Point>::other> > {$/;"	c	namespace:ALE
ISectionTest	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^PetscErrorCode ISectionTest(const Options *options)$/;"	f
ISectionTests	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^PetscErrorCode ISectionTests(const Options *options)$/;"	f
ISieveConverter	include/sieve/ISieve.hh	/^  class ISieveConverter {$/;"	c	namespace:ALE
ISieveISectionPartitionNewOverlapTest	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^PetscErrorCode ISieveISectionPartitionNewOverlapTest(const Options *options)$/;"	f
ISieveISectionPartitionTest	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^PetscErrorCode ISieveISectionPartitionTest(const Options *options)$/;"	f
ISieveSerializer	include/sieve/ISieve.hh	/^  class ISieveSerializer {$/;"	c	namespace:ALE
ISieveTraversal	include/sieve/ISieve.hh	/^  class ISieveTraversal {$/;"	c	namespace:ALE
ISieveVisitor	include/sieve/ISieve.hh	/^  namespace ISieveVisitor {$/;"	n	namespace:ALE
IUniformSection	include/sieve/IField.hh	/^    IUniformSection(MPI_Comm comm, const int debug = 0) : ParallelObject(comm, debug) {$/;"	f	class:ALE::IUniformSection
IUniformSection	include/sieve/IField.hh	/^    IUniformSection(MPI_Comm comm, const point_type& min, const point_type& max, const int debug = 0) : ParallelObject(comm, debug) {$/;"	f	class:ALE::IUniformSection
IUniformSection	include/sieve/IField.hh	/^    IUniformSection(const Obj<atlas_type>& atlas) : ParallelObject(atlas->comm(), atlas->debug()), _atlas(atlas) {$/;"	f	class:ALE::IUniformSection
IUniformSection	include/sieve/IField.hh	/^  class IUniformSection : public ALE::ParallelObject {$/;"	c	namespace:ALE
IdentifyBoundary	src/dm/impls/mesh/examples/tutorials/Coarsener.h	/^PetscErrorCode IdentifyBoundary(Obj<ALE::Mesh>& mesh, int dim)$/;"	f	namespace:ALE::Coarsener
IdentifyBoundary	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^PetscErrorCode HierarchyBuilder::IdentifyBoundary()$/;"	f	class:ALE::Hierarchy::HierarchyBuilder
IdentifyBoundary	src/dm/impls/mesh/examples/tutorials/ex_coarsen.h	/^PetscErrorCode IdentifyBoundary(Obj<ALE::Mesh>& mesh, int dim)$/;"	f
IdentifyCoarsestBoundary	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^PetscErrorCode HierarchyBuilder::IdentifyCoarsestBoundary()$/;"	f	class:ALE::Hierarchy::HierarchyBuilder
Identity	include/sieve/ParallelMapping.hh	/^  struct Identity : public std::unary_function<_Tp,_Tp>$/;"	s	namespace:ALE
If	config/PETSc/FEM.py	/^    from Cxx import If$/;"	i
ImmutableSet	config/BuildSystem/config/setsBackport.py	/^class ImmutableSet(BaseSet):$/;"	c
ImmutableSet	config/BuildSystem/config/setsOrdered.py	/^class ImmutableSet(BaseSet):$/;"	c
ImportSharedLinker	config/BuildSystem/build/processor.py	/^class ImportSharedLinker(SharedLinker):$/;"	c
InShell	config/BuildSystem/script.py	/^        class InShell(threading.Thread):$/;"	c	function:Script.executeShellCommand.runInShell
Include	config/PETSc/FEM.py	/^    from Cxx import Include$/;"	i
IndexSequence	include/sieve/ALE_containers.hh	/^    IndexSequence(const IndexSequence& seq)  : _index(seq._index) {};$/;"	f	struct:ALE::IndexSequence
IndexSequence	include/sieve/ALE_containers.hh	/^    IndexSequence(index_type& index)         : _index(index) {};$/;"	f	struct:ALE::IndexSequence
IndexSequence	include/sieve/ALE_containers.hh	/^  struct IndexSequence {$/;"	s	namespace:ALE
IndexSequenceTraits	include/sieve/LabelSifter.hh	/^    struct IndexSequenceTraits {$/;"	s	namespace:ALE::NewSifterDef
IndexSequenceTraits	include/sieve/Sifter.hh	/^    struct IndexSequenceTraits {$/;"	s	namespace:ALE::SifterDef
IndicesVisitor	include/sieve/ISieve.hh	/^      IndicesVisitor(const PetscSection& s, Order& o, const int size, const bool unique = false, const PetscInt fieldSize[] = NULL) : section(s), order(o), size(size), i(0), p(0), setBC(false) {$/;"	f	class:ALE::ISieveVisitor::IndicesVisitor
IndicesVisitor	include/sieve/ISieve.hh	/^      IndicesVisitor(const PetscSection& s, Order& o, const int size, value_type *values, const bool unique = false, const PetscInt fieldSize[] = NULL) : section(s), order(o), size(size), i(0), p(0), setBC(false) {$/;"	f	class:ALE::ISieveVisitor::IndicesVisitor
IndicesVisitor	include/sieve/ISieve.hh	/^      IndicesVisitor(const Section& s, Order& o, const int size, const bool unique = false) : section(s), order(o), size(size), i(0), p(0), freeOnly(false), skipConstraints(false) {$/;"	f	class:ALE::ISieveVisitor::IndicesVisitor
IndicesVisitor	include/sieve/ISieve.hh	/^      IndicesVisitor(const Section& s, Order& o, const int size, value_type *values, const bool unique = false) : section(s), order(o), size(size), i(0), p(0), freeOnly(false), skipConstraints(false) {$/;"	f	class:ALE::ISieveVisitor::IndicesVisitor
IndicesVisitor	include/sieve/ISieve.hh	/^    class IndicesVisitor {$/;"	c	namespace:ALE::ISieveVisitor
IndicesVisitor	include/sieve/ISieve.hh	/^    class IndicesVisitor<PetscSection, Order, Value> {$/;"	c	namespace:ALE::ISieveVisitor
Info	config/BuildSystem/help.py	/^class Info(logger.Logger):$/;"	c
Initializer	config/PETSc/FEM.py	/^    from Cxx import Initializer$/;"	i
InsertMode	bin/matlab/classes/matlabheader.h	/^typedef int InsertMode;$/;"	t
InsertMode	include/finclude/petscvecdef.h	16;"	d
InsertMode	include/petscsys.h	/^ typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES, INSERT_BC_VALUES, ADD_BC_VALUES} InsertMode;$/;"	t	typeref:enum:__anon31
InsertionBinaryFusion	include/sieve/ParallelMapping.hh	/^    class InsertionBinaryFusion {$/;"	c	namespace:ALE::Pullback
InsertionTest	src/dm/impls/mesh/examples/tests/overlap1.cxx	/^PetscErrorCode InsertionTest(Options *options)$/;"	f
Install	config/BuildSystem/config/package.py	/^  def Install(self):$/;"	m	class:GNUPackage
Install	config/BuildSystem/config/package.py	/^  def Install(self):$/;"	m	class:Package
Install	config/BuildSystem/config/packages/BlasLapack.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/BuildSystem/config/packages/CHOLMOD.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/BuildSystem/config/packages/MPI.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/BuildSystem/config/packages/UMFPACK.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/BuildSystem/config/packages/boost.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/BuildSystem/config/packages/cusp.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/BuildSystem/config/packages/exodusii.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/BuildSystem/config/packages/f2cblaslapack.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/BuildSystem/config/packages/fiat.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/BuildSystem/config/packages/hdf5.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/BuildSystem/config/packages/scientificpython.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/BuildSystem/config/packages/thrust.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/Chaco.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/FFC.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/Generator.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/MUMPS.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/Numpy.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/P3Dlib.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/PARTY.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/PTScotch.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/PaStiX.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/Sieve.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/Suggar.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/SuperLU.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/SuperLU_DIST.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/Triangle.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/Zoltan.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/ams.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/c2html.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/clique.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/cmake.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/cproto.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/ctetgen.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/elemental.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/expat.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/fftw.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/hwloc.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/hypre.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/lgrind.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/metis.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/ml.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/mpe.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/mpi4py.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/oski.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/pARMS.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/parmetis.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/petsc4py.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/scalapack.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/sowing.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/spai.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/sprng.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/sundials.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/tetgen.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/txpetscgpu.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/valgrind.py	/^  def Install(self):$/;"	m	class:Configure
Install	config/PETSc/packages/yaml.py	/^  def Install(self):$/;"	m	class:Configure
InstallMPICH	config/BuildSystem/config/packages/MPI.py	/^  def InstallMPICH(self):$/;"	m	class:Configure
InstallOpenMPI	config/BuildSystem/config/packages/MPI.py	/^  def InstallOpenMPI(self):$/;"	m	class:Configure
Installer	config/install.py	/^class Installer(script.Script):$/;"	c
IntegrateDualBasis_UFC	include/sieve/UFC.hh	/^PetscErrorCode IntegrateDualBasis_UFC(ALE::Obj<PETSC_MESH_TYPE> m, PETSC_MESH_TYPE::point_type c, ufc::form & f) {$/;"	f
InterpolateMultipleFusion	include/sieve/ParallelMapping.hh	/^    class InterpolateMultipleFusion {$/;"	c	namespace:ALE::Pullback
Interval	include/sieve/ISieve.hh	/^    Interval(): _min(point_type()), _max(point_type()) {};$/;"	f	class:ALE::Interval
Interval	include/sieve/ISieve.hh	/^    Interval(Iterator& iterator) {$/;"	f	class:ALE::Interval
Interval	include/sieve/ISieve.hh	/^    Interval(const Interval& interval): _min(interval.min()), _max(interval.max()) {};$/;"	f	class:ALE::Interval
Interval	include/sieve/ISieve.hh	/^    Interval(const point_type& min, const point_type& max): _min(min), _max(max) {};$/;"	f	class:ALE::Interval
Interval	include/sieve/ISieve.hh	/^  class Interval {$/;"	c	namespace:ALE
InvalidPETScError	config/BuildSystem/config/packages/PETSc.py	/^class InvalidPETScError(RuntimeError):$/;"	c
InvalidPETScError	config/PETSc/petsc.py	/^class InvalidPETScError(RuntimeError):$/;"	c
IsEqual	include/sieve/ParallelMapping.hh	/^    IsEqual(const _Tp& x) : x(x) {};$/;"	f	struct:ALE::IsEqual
IsEqual	include/sieve/ParallelMapping.hh	/^  struct IsEqual : public std::unary_function<_Tp, bool>, public std::binary_function<_Tp, _Tp, bool>$/;"	s	namespace:ALE
IsPointInElement	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^bool IsPointInElement (Obj<ALE::Mesh> mesh, int dim, ALE::Mesh::real_section_type::patch_type cPatch, ALE::Mesh::point_type triangle, ALE::Mesh::point_type node)$/;"	f	namespace:ALE::Coarsener
J	include/petscdmplex.h	/^  Mat   J; \/* Preconditioner for testing *\/$/;"	m	struct:__anon36
JSONProxy	include/web/AMS.py	/^from pyjamas.JSONService import JSONProxy$/;"	i
JSONProxy	include/web/AMSOptions.py	/^from pyjamas.JSONService import JSONProxy$/;"	i
JacActionCtx	include/petscdmplex.h	/^} JacActionCtx;$/;"	t	typeref:struct:__anon36
Jac_FEMProblem	include/sieve/FEMProblem.hh	/^    PetscErrorCode Jac_FEMProblem(::Mesh mesh, SectionReal section, Mat A, void * ctx) {$/;"	f	namespace:ALE::Problem
KSP	bin/matlab/classes/matlabheader.h	/^typedef PetscPointer KSP;$/;"	t
KSP	include/finclude/petsckspdef.h	11;"	d
KSP	include/petscksp.h	/^typedef struct _p_KSP*     KSP;$/;"	t	typeref:struct:_p_KSP
KSPBCGS	include/finclude/petsckspdef.h	36;"	d
KSPBCGS	include/petscksp.h	48;"	d
KSPBCGSL	include/finclude/petsckspdef.h	40;"	d
KSPBCGSL	include/petscksp.h	52;"	d
KSPBICG	include/finclude/petsckspdef.h	47;"	d
KSPBICG	include/petscksp.h	60;"	d
KSPCG	include/finclude/petsckspdef.h	25;"	d
KSPCG	include/petscksp.h	35;"	d
KSPCGNE	include/finclude/petsckspdef.h	26;"	d
KSPCGNE	include/petscksp.h	38;"	d
KSPCGS	include/finclude/petsckspdef.h	41;"	d
KSPCGS	include/petscksp.h	53;"	d
KSPCGType	include/finclude/petsckspdef.h	16;"	d
KSPCGType	include/petscksp.h	/^typedef enum {KSP_CG_SYMMETRIC=0,KSP_CG_HERMITIAN=1} KSPCGType;$/;"	t	typeref:enum:__anon44
KSPCGTypes	include/petscksp.h	/^PETSC_EXTERN const char *const KSPCGTypes[];$/;"	v
KSPCHEBYSHEV	include/finclude/petsckspdef.h	24;"	d
KSPCHEBYSHEV	include/petscksp.h	34;"	d
KSPCR	include/finclude/petsckspdef.h	43;"	d
KSPCR	include/petscksp.h	55;"	d
KSPConvergedReason	include/finclude/petsckspdef.h	17;"	d
KSPConvergedReason	include/petscksp.h	/^              KSP_CONVERGED_ITERATING          =  0} KSPConvergedReason;$/;"	t	typeref:enum:__anon43
KSPConvergedReasons	include/petscksp.h	/^PETSC_EXTERN const char *const*KSPConvergedReasons;$/;"	v
KSPDGMRES	include/finclude/petsckspdef.h	33;"	d
KSPDGMRES	include/petscksp.h	45;"	d
KSPDefaultConvergedCtx	include/petsc-private/kspimpl.h	/^} KSPDefaultConvergedCtx;$/;"	t	typeref:struct:__anon21
KSPDynTolCtx	include/petsc-private/kspimpl.h	/^} KSPDynTolCtx;$/;"	t	typeref:struct:__anon20
KSPFBCGS	include/finclude/petsckspdef.h	38;"	d
KSPFBCGS	include/petscksp.h	50;"	d
KSPFBCGSR	include/finclude/petsckspdef.h	39;"	d
KSPFBCGSR	include/petscksp.h	51;"	d
KSPFGMRES	include/finclude/petsckspdef.h	31;"	d
KSPFGMRES	include/petscksp.h	43;"	d
KSPFischerGuess	include/finclude/petsckspdef.h	12;"	d
KSPFischerGuess	include/petscksp.h	/^typedef struct _p_KSPFischerGuess {PetscInt method,curl,maxl,refcnt;PetscBool  monitor;Mat mat; KSP ksp;}* KSPFischerGuess;$/;"	t	typeref:struct:_p_KSPFischerGuess
KSPGCR	include/finclude/petsckspdef.h	52;"	d
KSPGCR	include/petscksp.h	65;"	d
KSPGLTR	include/finclude/petsckspdef.h	29;"	d
KSPGLTR	include/petscksp.h	41;"	d
KSPGMRES	include/finclude/petsckspdef.h	30;"	d
KSPGMRES	include/petscksp.h	42;"	d
KSPGMRESCGSRefinementType	include/finclude/petsckspdef.h	19;"	d
KSPGMRESCGSRefinementType	include/petscksp.h	/^typedef enum {KSP_GMRES_CGS_REFINE_NEVER, KSP_GMRES_CGS_REFINE_IFNEEDED, KSP_GMRES_CGS_REFINE_ALWAYS} KSPGMRESCGSRefinementType;$/;"	t	typeref:enum:__anon41
KSPGMRESCGSRefinementTypes	include/petscksp.h	/^PETSC_EXTERN const char *const KSPGMRESCGSRefinementTypes[];$/;"	v
KSPGROPPCG	include/petscksp.h	36;"	d
KSPGuessFischer	include/petsc-private/kspimpl.h	/^typedef struct {PetscInt model,curl,maxl;Mat mat; KSP ksp;}* KSPGuessFischer;$/;"	t	typeref:struct:__anon18
KSPIBCGS	include/finclude/petsckspdef.h	37;"	d
KSPIBCGS	include/petscksp.h	49;"	d
KSPLCD	include/finclude/petsckspdef.h	50;"	d
KSPLCD	include/petscksp.h	63;"	d
KSPLGMRES	include/finclude/petsckspdef.h	32;"	d
KSPLGMRES	include/petscksp.h	44;"	d
KSPLSQR	include/finclude/petsckspdef.h	44;"	d
KSPLSQR	include/petscksp.h	57;"	d
KSPList	include/petscksp.h	/^PETSC_EXTERN PetscFunctionList KSPList;$/;"	v
KSPLogResidualHistory	include/petsc-private/kspimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode KSPLogResidualHistory(KSP ksp,PetscReal norm)$/;"	f
KSPMINRES	include/finclude/petsckspdef.h	48;"	d
KSPMINRES	include/petscksp.h	61;"	d
KSPNASH	include/finclude/petsckspdef.h	27;"	d
KSPNASH	include/petscksp.h	39;"	d
KSPNormType	include/finclude/petsckspdef.h	18;"	d
KSPNormType	include/petscksp.h	/^typedef enum {KSP_NORM_DEFAULT = -1,KSP_NORM_NONE = 0,KSP_NORM_PRECONDITIONED = 1,KSP_NORM_UNPRECONDITIONED = 2,KSP_NORM_NATURAL = 3} KSPNormType;$/;"	t	typeref:enum:__anon42
KSPNormTypes	include/petscksp.h	/^PETSC_EXTERN const char *const*const KSPNormTypes;$/;"	v
KSPOps	include/petsc-private/kspimpl.h	/^typedef struct _KSPOps *KSPOps;$/;"	t	typeref:struct:_KSPOps
KSPPGMRES	include/finclude/petsckspdef.h	34;"	d
KSPPGMRES	include/petscksp.h	46;"	d
KSPPIPECG	include/petscksp.h	37;"	d
KSPPIPECR	include/petscksp.h	56;"	d
KSPPREONLY	include/finclude/petsckspdef.h	45;"	d
KSPPREONLY	include/petscksp.h	58;"	d
KSPPYTHON	include/finclude/petsckspdef.h	51;"	d
KSPPYTHON	include/petscksp.h	64;"	d
KSPQCG	include/finclude/petsckspdef.h	46;"	d
KSPQCG	include/petscksp.h	59;"	d
KSPRICHARDSON	include/finclude/petsckspdef.h	23;"	d
KSPRICHARDSON	include/petscksp.h	33;"	d
KSPRegisterAllCalled	include/petscksp.h	/^PETSC_EXTERN PetscBool         KSPRegisterAllCalled;$/;"	v
KSPSPECEST	include/finclude/petsckspdef.h	53;"	d
KSPSPECEST	include/petscksp.h	66;"	d
KSPSTCG	include/finclude/petsckspdef.h	28;"	d
KSPSTCG	include/petscksp.h	40;"	d
KSPSYMMLQ	include/finclude/petsckspdef.h	49;"	d
KSPSYMMLQ	include/petscksp.h	62;"	d
KSPSetUpStage	include/petsc-private/kspimpl.h	/^typedef enum {KSP_SETUP_NEW, KSP_SETUP_NEWMATRIX, KSP_SETUP_NEWRHS} KSPSetUpStage;$/;"	t	typeref:enum:__anon19
KSPTCQMR	include/finclude/petsckspdef.h	35;"	d
KSPTCQMR	include/petscksp.h	47;"	d
KSPTFQMR	include/finclude/petsckspdef.h	42;"	d
KSPTFQMR	include/petscksp.h	54;"	d
KSPType	include/finclude/petsckspdef.h	15;"	d
KSPType	include/petscksp.h	/^typedef const char* KSPType;$/;"	t
KSP_CG_HERMITIAN	include/petscksp.h	/^typedef enum {KSP_CG_SYMMETRIC=0,KSP_CG_HERMITIAN=1} KSPCGType;$/;"	e	enum:__anon44
KSP_CG_SYMMETRIC	include/petscksp.h	/^typedef enum {KSP_CG_SYMMETRIC=0,KSP_CG_HERMITIAN=1} KSPCGType;$/;"	e	enum:__anon44
KSP_CLASSID	include/petscksp.h	/^PETSC_EXTERN PetscClassId KSP_CLASSID;$/;"	v
KSP_CONVERGED_ATOL	include/petscksp.h	/^              KSP_CONVERGED_ATOL               =  3,$/;"	e	enum:__anon43
KSP_CONVERGED_ATOL_NORMAL	include/petscksp.h	/^              KSP_CONVERGED_ATOL_NORMAL        =  9,$/;"	e	enum:__anon43
KSP_CONVERGED_CG_CONSTRAINED	include/petscksp.h	/^              KSP_CONVERGED_CG_CONSTRAINED     =  6,$/;"	e	enum:__anon43
KSP_CONVERGED_CG_NEG_CURVE	include/petscksp.h	/^              KSP_CONVERGED_CG_NEG_CURVE       =  5,$/;"	e	enum:__anon43
KSP_CONVERGED_HAPPY_BREAKDOWN	include/petscksp.h	/^              KSP_CONVERGED_HAPPY_BREAKDOWN    =  8,$/;"	e	enum:__anon43
KSP_CONVERGED_ITERATING	include/petscksp.h	/^              KSP_CONVERGED_ITERATING          =  0} KSPConvergedReason;$/;"	e	enum:__anon43
KSP_CONVERGED_ITS	include/petscksp.h	/^              KSP_CONVERGED_ITS                =  4,$/;"	e	enum:__anon43
KSP_CONVERGED_RTOL	include/petscksp.h	/^              KSP_CONVERGED_RTOL               =  2,$/;"	e	enum:__anon43
KSP_CONVERGED_RTOL_NORMAL	include/petscksp.h	/^              KSP_CONVERGED_RTOL_NORMAL        =  1,$/;"	e	enum:__anon43
KSP_CONVERGED_STEP_LENGTH	include/petscksp.h	/^              KSP_CONVERGED_STEP_LENGTH        =  7,$/;"	e	enum:__anon43
KSP_DIVERGED_BREAKDOWN	include/petscksp.h	/^              KSP_DIVERGED_BREAKDOWN           = -5,$/;"	e	enum:__anon43
KSP_DIVERGED_BREAKDOWN_BICG	include/petscksp.h	/^              KSP_DIVERGED_BREAKDOWN_BICG      = -6,$/;"	e	enum:__anon43
KSP_DIVERGED_DTOL	include/petscksp.h	/^              KSP_DIVERGED_DTOL                = -4,$/;"	e	enum:__anon43
KSP_DIVERGED_INDEFINITE_MAT	include/petscksp.h	/^              KSP_DIVERGED_INDEFINITE_MAT      = -10,$/;"	e	enum:__anon43
KSP_DIVERGED_INDEFINITE_PC	include/petscksp.h	/^              KSP_DIVERGED_INDEFINITE_PC       = -8,$/;"	e	enum:__anon43
KSP_DIVERGED_ITS	include/petscksp.h	/^              KSP_DIVERGED_ITS                 = -3,$/;"	e	enum:__anon43
KSP_DIVERGED_NANORINF	include/petscksp.h	/^              KSP_DIVERGED_NANORINF            = -9,$/;"	e	enum:__anon43
KSP_DIVERGED_NONSYMMETRIC	include/petscksp.h	/^              KSP_DIVERGED_NONSYMMETRIC        = -7,$/;"	e	enum:__anon43
KSP_DIVERGED_NULL	include/petscksp.h	/^              KSP_DIVERGED_NULL                = -2,$/;"	e	enum:__anon43
KSP_FILE_CLASSID	include/petscksp.h	276;"	d
KSP_GMRESOrthogonalization	include/petsc-private/kspimpl.h	/^PETSC_EXTERN PetscLogEvent KSP_GMRESOrthogonalization, KSP_SetUp, KSP_Solve;$/;"	v
KSP_GMRES_CGS_REFINE_ALWAYS	include/petscksp.h	/^typedef enum {KSP_GMRES_CGS_REFINE_NEVER, KSP_GMRES_CGS_REFINE_IFNEEDED, KSP_GMRES_CGS_REFINE_ALWAYS} KSPGMRESCGSRefinementType;$/;"	e	enum:__anon41
KSP_GMRES_CGS_REFINE_IFNEEDED	include/petscksp.h	/^typedef enum {KSP_GMRES_CGS_REFINE_NEVER, KSP_GMRES_CGS_REFINE_IFNEEDED, KSP_GMRES_CGS_REFINE_ALWAYS} KSPGMRESCGSRefinementType;$/;"	e	enum:__anon41
KSP_GMRES_CGS_REFINE_NEVER	include/petscksp.h	/^typedef enum {KSP_GMRES_CGS_REFINE_NEVER, KSP_GMRES_CGS_REFINE_IFNEEDED, KSP_GMRES_CGS_REFINE_ALWAYS} KSPGMRESCGSRefinementType;$/;"	e	enum:__anon41
KSP_MatMult	include/petsc-private/kspimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode KSP_MatMult(KSP ksp,Mat A,Vec x,Vec y)$/;"	f
KSP_MatMultTranspose	include/petsc-private/kspimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode KSP_MatMultTranspose(KSP ksp,Mat A,Vec x,Vec y)$/;"	f
KSP_NORM_DEFAULT	include/petscksp.h	/^typedef enum {KSP_NORM_DEFAULT = -1,KSP_NORM_NONE = 0,KSP_NORM_PRECONDITIONED = 1,KSP_NORM_UNPRECONDITIONED = 2,KSP_NORM_NATURAL = 3} KSPNormType;$/;"	e	enum:__anon42
KSP_NORM_MAX	include/petscksp.h	299;"	d
KSP_NORM_NATURAL	include/petscksp.h	/^typedef enum {KSP_NORM_DEFAULT = -1,KSP_NORM_NONE = 0,KSP_NORM_PRECONDITIONED = 1,KSP_NORM_UNPRECONDITIONED = 2,KSP_NORM_NATURAL = 3} KSPNormType;$/;"	e	enum:__anon42
KSP_NORM_NONE	include/petscksp.h	/^typedef enum {KSP_NORM_DEFAULT = -1,KSP_NORM_NONE = 0,KSP_NORM_PRECONDITIONED = 1,KSP_NORM_UNPRECONDITIONED = 2,KSP_NORM_NATURAL = 3} KSPNormType;$/;"	e	enum:__anon42
KSP_NORM_PRECONDITIONED	include/petscksp.h	/^typedef enum {KSP_NORM_DEFAULT = -1,KSP_NORM_NONE = 0,KSP_NORM_PRECONDITIONED = 1,KSP_NORM_UNPRECONDITIONED = 2,KSP_NORM_NATURAL = 3} KSPNormType;$/;"	e	enum:__anon42
KSP_NORM_UNPRECONDITIONED	include/petscksp.h	/^typedef enum {KSP_NORM_DEFAULT = -1,KSP_NORM_NONE = 0,KSP_NORM_PRECONDITIONED = 1,KSP_NORM_UNPRECONDITIONED = 2,KSP_NORM_NATURAL = 3} KSPNormType;$/;"	e	enum:__anon42
KSP_PCApply	include/petsc-private/kspimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode KSP_PCApply(KSP ksp,Vec x,Vec y)$/;"	f
KSP_PCApplyBAorAB	include/petsc-private/kspimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode KSP_PCApplyBAorAB(KSP ksp,Vec x,Vec y,Vec w)$/;"	f
KSP_PCApplyBAorABTranspose	include/petsc-private/kspimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode KSP_PCApplyBAorABTranspose(KSP ksp,Vec x,Vec y,Vec w)$/;"	f
KSP_PCApplyTranspose	include/petsc-private/kspimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode KSP_PCApplyTranspose(KSP ksp,Vec x,Vec y)$/;"	f
KSP_RemoveNullSpace	include/petsc-private/kspimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode KSP_RemoveNullSpace(KSP ksp,Vec y)$/;"	f
KSP_SETUP_NEW	include/petsc-private/kspimpl.h	/^typedef enum {KSP_SETUP_NEW, KSP_SETUP_NEWMATRIX, KSP_SETUP_NEWRHS} KSPSetUpStage;$/;"	e	enum:__anon19
KSP_SETUP_NEWMATRIX	include/petsc-private/kspimpl.h	/^typedef enum {KSP_SETUP_NEW, KSP_SETUP_NEWMATRIX, KSP_SETUP_NEWRHS} KSPSetUpStage;$/;"	e	enum:__anon19
KSP_SETUP_NEWRHS	include/petsc-private/kspimpl.h	/^typedef enum {KSP_SETUP_NEW, KSP_SETUP_NEWMATRIX, KSP_SETUP_NEWRHS} KSPSetUpStage;$/;"	e	enum:__anon19
KSP_SetUp	include/petsc-private/kspimpl.h	/^PETSC_EXTERN PetscLogEvent KSP_GMRESOrthogonalization, KSP_SetUp, KSP_Solve;$/;"	v
KSP_Solve	include/petsc-private/kspimpl.h	/^PETSC_EXTERN PetscLogEvent KSP_GMRESOrthogonalization, KSP_SetUp, KSP_Solve;$/;"	v
KeyboardListener	bin/TOPSInstaller.py	/^def KeyboardListener(event):$/;"	f
LAPACKgeev_	include/petscblaslapack_c.h	123;"	d
LAPACKgeev_	include/petscblaslapack_c.h	165;"	d
LAPACKgeev_	include/petscblaslapack_c.h	38;"	d
LAPACKgeev_	include/petscblaslapack_c.h	80;"	d
LAPACKgeev_	include/petscblaslapack_caps.h	123;"	d
LAPACKgeev_	include/petscblaslapack_caps.h	165;"	d
LAPACKgeev_	include/petscblaslapack_caps.h	35;"	d
LAPACKgeev_	include/petscblaslapack_caps.h	77;"	d
LAPACKgeev_	include/petscblaslapack_qd.h	34;"	d
LAPACKgeev_	include/petscblaslapack_qd.h	65;"	d
LAPACKgeev_	include/petscblaslapack_stdcall.h	115;"	d
LAPACKgeev_	include/petscblaslapack_stdcall.h	174;"	d
LAPACKgeev_	include/petscblaslapack_stdcall.h	232;"	d
LAPACKgeev_	include/petscblaslapack_stdcall.h	51;"	d
LAPACKgeev_	include/petscblaslapack_uscore.h	121;"	d
LAPACKgeev_	include/petscblaslapack_uscore.h	164;"	d
LAPACKgeev_	include/petscblaslapack_uscore.h	206;"	d
LAPACKgeev_	include/petscblaslapack_uscore.h	248;"	d
LAPACKgeev_	include/petscblaslapack_uscore.h	37;"	d
LAPACKgeev_	include/petscblaslapack_uscore.h	79;"	d
LAPACKgelss_	include/petscblaslapack_c.h	110;"	d
LAPACKgelss_	include/petscblaslapack_c.h	153;"	d
LAPACKgelss_	include/petscblaslapack_c.h	26;"	d
LAPACKgelss_	include/petscblaslapack_c.h	68;"	d
LAPACKgelss_	include/petscblaslapack_caps.h	111;"	d
LAPACKgelss_	include/petscblaslapack_caps.h	153;"	d
LAPACKgelss_	include/petscblaslapack_caps.h	25;"	d
LAPACKgelss_	include/petscblaslapack_caps.h	67;"	d
LAPACKgelss_	include/petscblaslapack_qd.h	24;"	d
LAPACKgelss_	include/petscblaslapack_stdcall.h	159;"	d
LAPACKgelss_	include/petscblaslapack_stdcall.h	217;"	d
LAPACKgelss_	include/petscblaslapack_stdcall.h	36;"	d
LAPACKgelss_	include/petscblaslapack_stdcall.h	98;"	d
LAPACKgelss_	include/petscblaslapack_uscore.h	109;"	d
LAPACKgelss_	include/petscblaslapack_uscore.h	151;"	d
LAPACKgelss_	include/petscblaslapack_uscore.h	194;"	d
LAPACKgelss_	include/petscblaslapack_uscore.h	236;"	d
LAPACKgelss_	include/petscblaslapack_uscore.h	25;"	d
LAPACKgelss_	include/petscblaslapack_uscore.h	67;"	d
LAPACKgeqrf_	include/petscblaslapack_c.h	11;"	d
LAPACKgeqrf_	include/petscblaslapack_c.h	139;"	d
LAPACKgeqrf_	include/petscblaslapack_c.h	53;"	d
LAPACKgeqrf_	include/petscblaslapack_c.h	97;"	d
LAPACKgeqrf_	include/petscblaslapack_caps.h	10;"	d
LAPACKgeqrf_	include/petscblaslapack_caps.h	139;"	d
LAPACKgeqrf_	include/petscblaslapack_caps.h	52;"	d
LAPACKgeqrf_	include/petscblaslapack_caps.h	97;"	d
LAPACKgeqrf_	include/petscblaslapack_qd.h	43;"	d
LAPACKgeqrf_	include/petscblaslapack_qd.h	9;"	d
LAPACKgeqrf_	include/petscblaslapack_stdcall.h	144;"	d
LAPACKgeqrf_	include/petscblaslapack_stdcall.h	202;"	d
LAPACKgeqrf_	include/petscblaslapack_stdcall.h	20;"	d
LAPACKgeqrf_	include/petscblaslapack_stdcall.h	82;"	d
LAPACKgeqrf_	include/petscblaslapack_uscore.h	10;"	d
LAPACKgeqrf_	include/petscblaslapack_uscore.h	138;"	d
LAPACKgeqrf_	include/petscblaslapack_uscore.h	180;"	d
LAPACKgeqrf_	include/petscblaslapack_uscore.h	222;"	d
LAPACKgeqrf_	include/petscblaslapack_uscore.h	52;"	d
LAPACKgeqrf_	include/petscblaslapack_uscore.h	94;"	d
LAPACKgerfs_	include/petscblaslapack_c.h	111;"	d
LAPACKgerfs_	include/petscblaslapack_c.h	154;"	d
LAPACKgerfs_	include/petscblaslapack_c.h	27;"	d
LAPACKgerfs_	include/petscblaslapack_c.h	69;"	d
LAPACKgerfs_	include/petscblaslapack_caps.h	112;"	d
LAPACKgerfs_	include/petscblaslapack_caps.h	154;"	d
LAPACKgerfs_	include/petscblaslapack_caps.h	26;"	d
LAPACKgerfs_	include/petscblaslapack_caps.h	68;"	d
LAPACKgerfs_	include/petscblaslapack_stdcall.h	132;"	d
LAPACKgerfs_	include/petscblaslapack_stdcall.h	192;"	d
LAPACKgerfs_	include/petscblaslapack_stdcall.h	250;"	d
LAPACKgerfs_	include/petscblaslapack_stdcall.h	71;"	d
LAPACKgerfs_	include/petscblaslapack_uscore.h	110;"	d
LAPACKgerfs_	include/petscblaslapack_uscore.h	152;"	d
LAPACKgerfs_	include/petscblaslapack_uscore.h	195;"	d
LAPACKgerfs_	include/petscblaslapack_uscore.h	237;"	d
LAPACKgerfs_	include/petscblaslapack_uscore.h	26;"	d
LAPACKgerfs_	include/petscblaslapack_uscore.h	68;"	d
LAPACKgesv_	include/petscblaslapack_c.h	122;"	d
LAPACKgesv_	include/petscblaslapack_c.h	152;"	d
LAPACKgesv_	include/petscblaslapack_c.h	25;"	d
LAPACKgesv_	include/petscblaslapack_c.h	67;"	d
LAPACKgesv_	include/petscblaslapack_caps.h	110;"	d
LAPACKgesv_	include/petscblaslapack_caps.h	152;"	d
LAPACKgesv_	include/petscblaslapack_caps.h	24;"	d
LAPACKgesv_	include/petscblaslapack_caps.h	66;"	d
LAPACKgesv_	include/petscblaslapack_qd.h	23;"	d
LAPACKgesv_	include/petscblaslapack_stdcall.h	158;"	d
LAPACKgesv_	include/petscblaslapack_stdcall.h	216;"	d
LAPACKgesv_	include/petscblaslapack_stdcall.h	35;"	d
LAPACKgesv_	include/petscblaslapack_stdcall.h	97;"	d
LAPACKgesv_	include/petscblaslapack_uscore.h	108;"	d
LAPACKgesv_	include/petscblaslapack_uscore.h	163;"	d
LAPACKgesv_	include/petscblaslapack_uscore.h	193;"	d
LAPACKgesv_	include/petscblaslapack_uscore.h	235;"	d
LAPACKgesv_	include/petscblaslapack_uscore.h	24;"	d
LAPACKgesv_	include/petscblaslapack_uscore.h	66;"	d
LAPACKgesvd_	include/petscblaslapack_c.h	121;"	d
LAPACKgesvd_	include/petscblaslapack_c.h	164;"	d
LAPACKgesvd_	include/petscblaslapack_c.h	37;"	d
LAPACKgesvd_	include/petscblaslapack_c.h	79;"	d
LAPACKgesvd_	include/petscblaslapack_caps.h	122;"	d
LAPACKgesvd_	include/petscblaslapack_caps.h	164;"	d
LAPACKgesvd_	include/petscblaslapack_caps.h	34;"	d
LAPACKgesvd_	include/petscblaslapack_caps.h	76;"	d
LAPACKgesvd_	include/petscblaslapack_qd.h	33;"	d
LAPACKgesvd_	include/petscblaslapack_qd.h	64;"	d
LAPACKgesvd_	include/petscblaslapack_stdcall.h	113;"	d
LAPACKgesvd_	include/petscblaslapack_stdcall.h	176;"	d
LAPACKgesvd_	include/petscblaslapack_stdcall.h	234;"	d
LAPACKgesvd_	include/petscblaslapack_stdcall.h	53;"	d
LAPACKgesvd_	include/petscblaslapack_uscore.h	120;"	d
LAPACKgesvd_	include/petscblaslapack_uscore.h	162;"	d
LAPACKgesvd_	include/petscblaslapack_uscore.h	205;"	d
LAPACKgesvd_	include/petscblaslapack_uscore.h	247;"	d
LAPACKgesvd_	include/petscblaslapack_uscore.h	36;"	d
LAPACKgesvd_	include/petscblaslapack_uscore.h	78;"	d
LAPACKgetrf_	include/petscblaslapack_c.h	13;"	d
LAPACKgetrf_	include/petscblaslapack_c.h	141;"	d
LAPACKgetrf_	include/petscblaslapack_c.h	55;"	d
LAPACKgetrf_	include/petscblaslapack_c.h	99;"	d
LAPACKgetrf_	include/petscblaslapack_caps.h	12;"	d
LAPACKgetrf_	include/petscblaslapack_caps.h	141;"	d
LAPACKgetrf_	include/petscblaslapack_caps.h	54;"	d
LAPACKgetrf_	include/petscblaslapack_caps.h	99;"	d
LAPACKgetrf_	include/petscblaslapack_qd.h	11;"	d
LAPACKgetrf_	include/petscblaslapack_qd.h	45;"	d
LAPACKgetrf_	include/petscblaslapack_stdcall.h	146;"	d
LAPACKgetrf_	include/petscblaslapack_stdcall.h	204;"	d
LAPACKgetrf_	include/petscblaslapack_stdcall.h	22;"	d
LAPACKgetrf_	include/petscblaslapack_stdcall.h	84;"	d
LAPACKgetrf_	include/petscblaslapack_uscore.h	12;"	d
LAPACKgetrf_	include/petscblaslapack_uscore.h	140;"	d
LAPACKgetrf_	include/petscblaslapack_uscore.h	182;"	d
LAPACKgetrf_	include/petscblaslapack_uscore.h	224;"	d
LAPACKgetrf_	include/petscblaslapack_uscore.h	54;"	d
LAPACKgetrf_	include/petscblaslapack_uscore.h	96;"	d
LAPACKgetrs_	include/petscblaslapack_c.h	117;"	d
LAPACKgetrs_	include/petscblaslapack_c.h	160;"	d
LAPACKgetrs_	include/petscblaslapack_c.h	33;"	d
LAPACKgetrs_	include/petscblaslapack_c.h	75;"	d
LAPACKgetrs_	include/petscblaslapack_caps.h	118;"	d
LAPACKgetrs_	include/petscblaslapack_caps.h	160;"	d
LAPACKgetrs_	include/petscblaslapack_caps.h	32;"	d
LAPACKgetrs_	include/petscblaslapack_caps.h	74;"	d
LAPACKgetrs_	include/petscblaslapack_qd.h	29;"	d
LAPACKgetrs_	include/petscblaslapack_qd.h	60;"	d
LAPACKgetrs_	include/petscblaslapack_stdcall.h	107;"	d
LAPACKgetrs_	include/petscblaslapack_stdcall.h	168;"	d
LAPACKgetrs_	include/petscblaslapack_stdcall.h	226;"	d
LAPACKgetrs_	include/petscblaslapack_stdcall.h	47;"	d
LAPACKgetrs_	include/petscblaslapack_uscore.h	116;"	d
LAPACKgetrs_	include/petscblaslapack_uscore.h	158;"	d
LAPACKgetrs_	include/petscblaslapack_uscore.h	201;"	d
LAPACKgetrs_	include/petscblaslapack_uscore.h	243;"	d
LAPACKgetrs_	include/petscblaslapack_uscore.h	32;"	d
LAPACKgetrs_	include/petscblaslapack_uscore.h	74;"	d
LAPACKgges_	include/petscblaslapack_c.h	130;"	d
LAPACKgges_	include/petscblaslapack_c.h	173;"	d
LAPACKgges_	include/petscblaslapack_c.h	46;"	d
LAPACKgges_	include/petscblaslapack_c.h	88;"	d
LAPACKgges_	include/petscblaslapack_caps.h	132;"	d
LAPACKgges_	include/petscblaslapack_caps.h	174;"	d
LAPACKgges_	include/petscblaslapack_caps.h	45;"	d
LAPACKgges_	include/petscblaslapack_caps.h	87;"	d
LAPACKgges_	include/petscblaslapack_stdcall.h	136;"	d
LAPACKgges_	include/petscblaslapack_stdcall.h	196;"	d
LAPACKgges_	include/petscblaslapack_stdcall.h	254;"	d
LAPACKgges_	include/petscblaslapack_stdcall.h	76;"	d
LAPACKgges_	include/petscblaslapack_uscore.h	129;"	d
LAPACKgges_	include/petscblaslapack_uscore.h	173;"	d
LAPACKgges_	include/petscblaslapack_uscore.h	215;"	d
LAPACKgges_	include/petscblaslapack_uscore.h	257;"	d
LAPACKgges_	include/petscblaslapack_uscore.h	45;"	d
LAPACKgges_	include/petscblaslapack_uscore.h	87;"	d
LAPACKhgeqz_	include/petscblaslapack_c.h	133;"	d
LAPACKhgeqz_	include/petscblaslapack_c.h	175;"	d
LAPACKhgeqz_	include/petscblaslapack_c.h	49;"	d
LAPACKhgeqz_	include/petscblaslapack_c.h	91;"	d
LAPACKhgeqz_	include/petscblaslapack_caps.h	135;"	d
LAPACKhgeqz_	include/petscblaslapack_caps.h	177;"	d
LAPACKhgeqz_	include/petscblaslapack_caps.h	48;"	d
LAPACKhgeqz_	include/petscblaslapack_caps.h	90;"	d
LAPACKhgeqz_	include/petscblaslapack_uscore.h	132;"	d
LAPACKhgeqz_	include/petscblaslapack_uscore.h	176;"	d
LAPACKhgeqz_	include/petscblaslapack_uscore.h	218;"	d
LAPACKhgeqz_	include/petscblaslapack_uscore.h	48;"	d
LAPACKhgeqz_	include/petscblaslapack_uscore.h	90;"	d
LAPACKhseqr_	include/petscblaslapack_c.h	129;"	d
LAPACKhseqr_	include/petscblaslapack_c.h	171;"	d
LAPACKhseqr_	include/petscblaslapack_c.h	45;"	d
LAPACKhseqr_	include/petscblaslapack_c.h	87;"	d
LAPACKhseqr_	include/petscblaslapack_caps.h	131;"	d
LAPACKhseqr_	include/petscblaslapack_caps.h	173;"	d
LAPACKhseqr_	include/petscblaslapack_caps.h	44;"	d
LAPACKhseqr_	include/petscblaslapack_caps.h	86;"	d
LAPACKhseqr_	include/petscblaslapack_stdcall.h	138;"	d
LAPACKhseqr_	include/petscblaslapack_stdcall.h	198;"	d
LAPACKhseqr_	include/petscblaslapack_stdcall.h	256;"	d
LAPACKhseqr_	include/petscblaslapack_stdcall.h	78;"	d
LAPACKhseqr_	include/petscblaslapack_uscore.h	128;"	d
LAPACKhseqr_	include/petscblaslapack_uscore.h	172;"	d
LAPACKhseqr_	include/petscblaslapack_uscore.h	214;"	d
LAPACKhseqr_	include/petscblaslapack_uscore.h	256;"	d
LAPACKhseqr_	include/petscblaslapack_uscore.h	44;"	d
LAPACKhseqr_	include/petscblaslapack_uscore.h	86;"	d
LAPACKormqr_	include/petscblaslapack_c.h	132;"	d
LAPACKormqr_	include/petscblaslapack_c.h	174;"	d
LAPACKormqr_	include/petscblaslapack_c.h	48;"	d
LAPACKormqr_	include/petscblaslapack_c.h	90;"	d
LAPACKormqr_	include/petscblaslapack_caps.h	134;"	d
LAPACKormqr_	include/petscblaslapack_caps.h	176;"	d
LAPACKormqr_	include/petscblaslapack_caps.h	47;"	d
LAPACKormqr_	include/petscblaslapack_caps.h	89;"	d
LAPACKormqr_	include/petscblaslapack_uscore.h	131;"	d
LAPACKormqr_	include/petscblaslapack_uscore.h	175;"	d
LAPACKormqr_	include/petscblaslapack_uscore.h	217;"	d
LAPACKormqr_	include/petscblaslapack_uscore.h	47;"	d
LAPACKormqr_	include/petscblaslapack_uscore.h	89;"	d
LAPACKpotrf_	include/petscblaslapack_c.h	114;"	d
LAPACKpotrf_	include/petscblaslapack_c.h	157;"	d
LAPACKpotrf_	include/petscblaslapack_c.h	30;"	d
LAPACKpotrf_	include/petscblaslapack_c.h	72;"	d
LAPACKpotrf_	include/petscblaslapack_caps.h	115;"	d
LAPACKpotrf_	include/petscblaslapack_caps.h	157;"	d
LAPACKpotrf_	include/petscblaslapack_caps.h	29;"	d
LAPACKpotrf_	include/petscblaslapack_caps.h	71;"	d
LAPACKpotrf_	include/petscblaslapack_qd.h	26;"	d
LAPACKpotrf_	include/petscblaslapack_qd.h	57;"	d
LAPACKpotrf_	include/petscblaslapack_stdcall.h	101;"	d
LAPACKpotrf_	include/petscblaslapack_stdcall.h	162;"	d
LAPACKpotrf_	include/petscblaslapack_stdcall.h	220;"	d
LAPACKpotrf_	include/petscblaslapack_stdcall.h	39;"	d
LAPACKpotrf_	include/petscblaslapack_uscore.h	113;"	d
LAPACKpotrf_	include/petscblaslapack_uscore.h	155;"	d
LAPACKpotrf_	include/petscblaslapack_uscore.h	198;"	d
LAPACKpotrf_	include/petscblaslapack_uscore.h	240;"	d
LAPACKpotrf_	include/petscblaslapack_uscore.h	29;"	d
LAPACKpotrf_	include/petscblaslapack_uscore.h	71;"	d
LAPACKpotrs_	include/petscblaslapack_c.h	115;"	d
LAPACKpotrs_	include/petscblaslapack_c.h	158;"	d
LAPACKpotrs_	include/petscblaslapack_c.h	31;"	d
LAPACKpotrs_	include/petscblaslapack_c.h	73;"	d
LAPACKpotrs_	include/petscblaslapack_caps.h	116;"	d
LAPACKpotrs_	include/petscblaslapack_caps.h	158;"	d
LAPACKpotrs_	include/petscblaslapack_caps.h	30;"	d
LAPACKpotrs_	include/petscblaslapack_caps.h	72;"	d
LAPACKpotrs_	include/petscblaslapack_qd.h	27;"	d
LAPACKpotrs_	include/petscblaslapack_qd.h	58;"	d
LAPACKpotrs_	include/petscblaslapack_stdcall.h	103;"	d
LAPACKpotrs_	include/petscblaslapack_stdcall.h	164;"	d
LAPACKpotrs_	include/petscblaslapack_stdcall.h	222;"	d
LAPACKpotrs_	include/petscblaslapack_stdcall.h	41;"	d
LAPACKpotrs_	include/petscblaslapack_uscore.h	114;"	d
LAPACKpotrs_	include/petscblaslapack_uscore.h	156;"	d
LAPACKpotrs_	include/petscblaslapack_uscore.h	199;"	d
LAPACKpotrs_	include/petscblaslapack_uscore.h	241;"	d
LAPACKpotrs_	include/petscblaslapack_uscore.h	30;"	d
LAPACKpotrs_	include/petscblaslapack_uscore.h	72;"	d
LAPACKpttrf_	include/petscblaslapack_c.h	108;"	d
LAPACKpttrf_	include/petscblaslapack_c.h	150;"	d
LAPACKpttrf_	include/petscblaslapack_c.h	22;"	d
LAPACKpttrf_	include/petscblaslapack_c.h	64;"	d
LAPACKpttrf_	include/petscblaslapack_caps.h	108;"	d
LAPACKpttrf_	include/petscblaslapack_caps.h	150;"	d
LAPACKpttrf_	include/petscblaslapack_caps.h	21;"	d
LAPACKpttrf_	include/petscblaslapack_caps.h	63;"	d
LAPACKpttrf_	include/petscblaslapack_qd.h	20;"	d
LAPACKpttrf_	include/petscblaslapack_qd.h	54;"	d
LAPACKpttrf_	include/petscblaslapack_stdcall.h	156;"	d
LAPACKpttrf_	include/petscblaslapack_stdcall.h	214;"	d
LAPACKpttrf_	include/petscblaslapack_stdcall.h	32;"	d
LAPACKpttrf_	include/petscblaslapack_stdcall.h	94;"	d
LAPACKpttrf_	include/petscblaslapack_uscore.h	105;"	d
LAPACKpttrf_	include/petscblaslapack_uscore.h	149;"	d
LAPACKpttrf_	include/petscblaslapack_uscore.h	191;"	d
LAPACKpttrf_	include/petscblaslapack_uscore.h	21;"	d
LAPACKpttrf_	include/petscblaslapack_uscore.h	233;"	d
LAPACKpttrf_	include/petscblaslapack_uscore.h	63;"	d
LAPACKpttrs_	include/petscblaslapack_c.h	128;"	d
LAPACKpttrs_	include/petscblaslapack_c.h	170;"	d
LAPACKpttrs_	include/petscblaslapack_c.h	23;"	d
LAPACKpttrs_	include/petscblaslapack_c.h	65;"	d
LAPACKpttrs_	include/petscblaslapack_caps.h	128;"	d
LAPACKpttrs_	include/petscblaslapack_caps.h	170;"	d
LAPACKpttrs_	include/petscblaslapack_caps.h	22;"	d
LAPACKpttrs_	include/petscblaslapack_caps.h	64;"	d
LAPACKpttrs_	include/petscblaslapack_qd.h	21;"	d
LAPACKpttrs_	include/petscblaslapack_qd.h	70;"	d
LAPACKpttrs_	include/petscblaslapack_stdcall.h	190;"	d
LAPACKpttrs_	include/petscblaslapack_stdcall.h	248;"	d
LAPACKpttrs_	include/petscblaslapack_stdcall.h	33;"	d
LAPACKpttrs_	include/petscblaslapack_stdcall.h	95;"	d
LAPACKpttrs_	include/petscblaslapack_uscore.h	106;"	d
LAPACKpttrs_	include/petscblaslapack_uscore.h	169;"	d
LAPACKpttrs_	include/petscblaslapack_uscore.h	211;"	d
LAPACKpttrs_	include/petscblaslapack_uscore.h	22;"	d
LAPACKpttrs_	include/petscblaslapack_uscore.h	253;"	d
LAPACKpttrs_	include/petscblaslapack_uscore.h	64;"	d
LAPACKstebz_	include/petscblaslapack_c.h	43;"	d
LAPACKstebz_	include/petscblaslapack_c.h	85;"	d
LAPACKstebz_	include/petscblaslapack_caps.h	42;"	d
LAPACKstebz_	include/petscblaslapack_caps.h	84;"	d
LAPACKstebz_	include/petscblaslapack_qd.h	39;"	d
LAPACKstebz_	include/petscblaslapack_stdcall.h	127;"	d
LAPACKstebz_	include/petscblaslapack_stdcall.h	66;"	d
LAPACKstebz_	include/petscblaslapack_uscore.h	126;"	d
LAPACKstebz_	include/petscblaslapack_uscore.h	42;"	d
LAPACKstebz_	include/petscblaslapack_uscore.h	84;"	d
LAPACKstein_	include/petscblaslapack_c.h	109;"	d
LAPACKstein_	include/petscblaslapack_c.h	151;"	d
LAPACKstein_	include/petscblaslapack_c.h	24;"	d
LAPACKstein_	include/petscblaslapack_c.h	66;"	d
LAPACKstein_	include/petscblaslapack_caps.h	109;"	d
LAPACKstein_	include/petscblaslapack_caps.h	151;"	d
LAPACKstein_	include/petscblaslapack_caps.h	23;"	d
LAPACKstein_	include/petscblaslapack_caps.h	65;"	d
LAPACKstein_	include/petscblaslapack_qd.h	22;"	d
LAPACKstein_	include/petscblaslapack_qd.h	55;"	d
LAPACKstein_	include/petscblaslapack_stdcall.h	157;"	d
LAPACKstein_	include/petscblaslapack_stdcall.h	215;"	d
LAPACKstein_	include/petscblaslapack_stdcall.h	34;"	d
LAPACKstein_	include/petscblaslapack_stdcall.h	96;"	d
LAPACKstein_	include/petscblaslapack_uscore.h	107;"	d
LAPACKstein_	include/petscblaslapack_uscore.h	150;"	d
LAPACKstein_	include/petscblaslapack_uscore.h	192;"	d
LAPACKstein_	include/petscblaslapack_uscore.h	234;"	d
LAPACKstein_	include/petscblaslapack_uscore.h	23;"	d
LAPACKstein_	include/petscblaslapack_uscore.h	65;"	d
LAPACKsteqr_	include/petscblaslapack_c.h	136;"	d
LAPACKsteqr_	include/petscblaslapack_c.h	178;"	d
LAPACKsteqr_	include/petscblaslapack_c.h	44;"	d
LAPACKsteqr_	include/petscblaslapack_c.h	86;"	d
LAPACKsteqr_	include/petscblaslapack_caps.h	130;"	d
LAPACKsteqr_	include/petscblaslapack_caps.h	172;"	d
LAPACKsteqr_	include/petscblaslapack_caps.h	43;"	d
LAPACKsteqr_	include/petscblaslapack_caps.h	85;"	d
LAPACKsteqr_	include/petscblaslapack_qd.h	40;"	d
LAPACKsteqr_	include/petscblaslapack_stdcall.h	129;"	d
LAPACKsteqr_	include/petscblaslapack_stdcall.h	188;"	d
LAPACKsteqr_	include/petscblaslapack_stdcall.h	246;"	d
LAPACKsteqr_	include/petscblaslapack_stdcall.h	68;"	d
LAPACKsteqr_	include/petscblaslapack_uscore.h	127;"	d
LAPACKsteqr_	include/petscblaslapack_uscore.h	171;"	d
LAPACKsteqr_	include/petscblaslapack_uscore.h	213;"	d
LAPACKsteqr_	include/petscblaslapack_uscore.h	255;"	d
LAPACKsteqr_	include/petscblaslapack_uscore.h	43;"	d
LAPACKsteqr_	include/petscblaslapack_uscore.h	85;"	d
LAPACKsyev_	include/petscblaslapack_c.h	124;"	d
LAPACKsyev_	include/petscblaslapack_c.h	166;"	d
LAPACKsyev_	include/petscblaslapack_c.h	39;"	d
LAPACKsyev_	include/petscblaslapack_c.h	81;"	d
LAPACKsyev_	include/petscblaslapack_caps.h	124;"	d
LAPACKsyev_	include/petscblaslapack_caps.h	166;"	d
LAPACKsyev_	include/petscblaslapack_caps.h	36;"	d
LAPACKsyev_	include/petscblaslapack_caps.h	78;"	d
LAPACKsyev_	include/petscblaslapack_qd.h	35;"	d
LAPACKsyev_	include/petscblaslapack_qd.h	66;"	d
LAPACKsyev_	include/petscblaslapack_stdcall.h	118;"	d
LAPACKsyev_	include/petscblaslapack_stdcall.h	179;"	d
LAPACKsyev_	include/petscblaslapack_stdcall.h	237;"	d
LAPACKsyev_	include/petscblaslapack_stdcall.h	56;"	d
LAPACKsyev_	include/petscblaslapack_uscore.h	122;"	d
LAPACKsyev_	include/petscblaslapack_uscore.h	165;"	d
LAPACKsyev_	include/petscblaslapack_uscore.h	207;"	d
LAPACKsyev_	include/petscblaslapack_uscore.h	249;"	d
LAPACKsyev_	include/petscblaslapack_uscore.h	38;"	d
LAPACKsyev_	include/petscblaslapack_uscore.h	80;"	d
LAPACKsyevx_	include/petscblaslapack_c.h	125;"	d
LAPACKsyevx_	include/petscblaslapack_c.h	167;"	d
LAPACKsyevx_	include/petscblaslapack_c.h	40;"	d
LAPACKsyevx_	include/petscblaslapack_c.h	82;"	d
LAPACKsyevx_	include/petscblaslapack_caps.h	125;"	d
LAPACKsyevx_	include/petscblaslapack_caps.h	167;"	d
LAPACKsyevx_	include/petscblaslapack_caps.h	37;"	d
LAPACKsyevx_	include/petscblaslapack_caps.h	79;"	d
LAPACKsyevx_	include/petscblaslapack_qd.h	36;"	d
LAPACKsyevx_	include/petscblaslapack_qd.h	67;"	d
LAPACKsyevx_	include/petscblaslapack_stdcall.h	120;"	d
LAPACKsyevx_	include/petscblaslapack_stdcall.h	181;"	d
LAPACKsyevx_	include/petscblaslapack_stdcall.h	239;"	d
LAPACKsyevx_	include/petscblaslapack_stdcall.h	58;"	d
LAPACKsyevx_	include/petscblaslapack_uscore.h	123;"	d
LAPACKsyevx_	include/petscblaslapack_uscore.h	166;"	d
LAPACKsyevx_	include/petscblaslapack_uscore.h	208;"	d
LAPACKsyevx_	include/petscblaslapack_uscore.h	250;"	d
LAPACKsyevx_	include/petscblaslapack_uscore.h	39;"	d
LAPACKsyevx_	include/petscblaslapack_uscore.h	81;"	d
LAPACKsygv_	include/petscblaslapack_c.h	126;"	d
LAPACKsygv_	include/petscblaslapack_c.h	168;"	d
LAPACKsygv_	include/petscblaslapack_c.h	41;"	d
LAPACKsygv_	include/petscblaslapack_c.h	83;"	d
LAPACKsygv_	include/petscblaslapack_caps.h	126;"	d
LAPACKsygv_	include/petscblaslapack_caps.h	168;"	d
LAPACKsygv_	include/petscblaslapack_caps.h	38;"	d
LAPACKsygv_	include/petscblaslapack_caps.h	80;"	d
LAPACKsygv_	include/petscblaslapack_qd.h	37;"	d
LAPACKsygv_	include/petscblaslapack_qd.h	68;"	d
LAPACKsygv_	include/petscblaslapack_stdcall.h	123;"	d
LAPACKsygv_	include/petscblaslapack_stdcall.h	184;"	d
LAPACKsygv_	include/petscblaslapack_stdcall.h	242;"	d
LAPACKsygv_	include/petscblaslapack_stdcall.h	61;"	d
LAPACKsygv_	include/petscblaslapack_uscore.h	124;"	d
LAPACKsygv_	include/petscblaslapack_uscore.h	167;"	d
LAPACKsygv_	include/petscblaslapack_uscore.h	209;"	d
LAPACKsygv_	include/petscblaslapack_uscore.h	251;"	d
LAPACKsygv_	include/petscblaslapack_uscore.h	40;"	d
LAPACKsygv_	include/petscblaslapack_uscore.h	82;"	d
LAPACKsygvx_	include/petscblaslapack_c.h	127;"	d
LAPACKsygvx_	include/petscblaslapack_c.h	169;"	d
LAPACKsygvx_	include/petscblaslapack_c.h	42;"	d
LAPACKsygvx_	include/petscblaslapack_c.h	84;"	d
LAPACKsygvx_	include/petscblaslapack_caps.h	127;"	d
LAPACKsygvx_	include/petscblaslapack_caps.h	169;"	d
LAPACKsygvx_	include/petscblaslapack_caps.h	39;"	d
LAPACKsygvx_	include/petscblaslapack_caps.h	81;"	d
LAPACKsygvx_	include/petscblaslapack_qd.h	38;"	d
LAPACKsygvx_	include/petscblaslapack_qd.h	69;"	d
LAPACKsygvx_	include/petscblaslapack_stdcall.h	125;"	d
LAPACKsygvx_	include/petscblaslapack_stdcall.h	186;"	d
LAPACKsygvx_	include/petscblaslapack_stdcall.h	244;"	d
LAPACKsygvx_	include/petscblaslapack_stdcall.h	63;"	d
LAPACKsygvx_	include/petscblaslapack_uscore.h	125;"	d
LAPACKsygvx_	include/petscblaslapack_uscore.h	168;"	d
LAPACKsygvx_	include/petscblaslapack_uscore.h	210;"	d
LAPACKsygvx_	include/petscblaslapack_uscore.h	252;"	d
LAPACKsygvx_	include/petscblaslapack_uscore.h	41;"	d
LAPACKsygvx_	include/petscblaslapack_uscore.h	83;"	d
LAPACKtgsen_	include/petscblaslapack_c.h	112;"	d
LAPACKtgsen_	include/petscblaslapack_c.h	155;"	d
LAPACKtgsen_	include/petscblaslapack_c.h	28;"	d
LAPACKtgsen_	include/petscblaslapack_c.h	70;"	d
LAPACKtgsen_	include/petscblaslapack_caps.h	113;"	d
LAPACKtgsen_	include/petscblaslapack_caps.h	155;"	d
LAPACKtgsen_	include/petscblaslapack_caps.h	27;"	d
LAPACKtgsen_	include/petscblaslapack_caps.h	69;"	d
LAPACKtgsen_	include/petscblaslapack_stdcall.h	160;"	d
LAPACKtgsen_	include/petscblaslapack_stdcall.h	218;"	d
LAPACKtgsen_	include/petscblaslapack_stdcall.h	37;"	d
LAPACKtgsen_	include/petscblaslapack_stdcall.h	99;"	d
LAPACKtgsen_	include/petscblaslapack_uscore.h	111;"	d
LAPACKtgsen_	include/petscblaslapack_uscore.h	153;"	d
LAPACKtgsen_	include/petscblaslapack_uscore.h	196;"	d
LAPACKtgsen_	include/petscblaslapack_uscore.h	238;"	d
LAPACKtgsen_	include/petscblaslapack_uscore.h	27;"	d
LAPACKtgsen_	include/petscblaslapack_uscore.h	69;"	d
LAPACKtrsen_	include/petscblaslapack_c.h	131;"	d
LAPACKtrsen_	include/petscblaslapack_c.h	172;"	d
LAPACKtrsen_	include/petscblaslapack_c.h	47;"	d
LAPACKtrsen_	include/petscblaslapack_c.h	89;"	d
LAPACKtrsen_	include/petscblaslapack_caps.h	133;"	d
LAPACKtrsen_	include/petscblaslapack_caps.h	175;"	d
LAPACKtrsen_	include/petscblaslapack_caps.h	46;"	d
LAPACKtrsen_	include/petscblaslapack_caps.h	88;"	d
LAPACKtrsen_	include/petscblaslapack_stdcall.h	134;"	d
LAPACKtrsen_	include/petscblaslapack_stdcall.h	194;"	d
LAPACKtrsen_	include/petscblaslapack_stdcall.h	252;"	d
LAPACKtrsen_	include/petscblaslapack_stdcall.h	73;"	d
LAPACKtrsen_	include/petscblaslapack_uscore.h	130;"	d
LAPACKtrsen_	include/petscblaslapack_uscore.h	174;"	d
LAPACKtrsen_	include/petscblaslapack_uscore.h	216;"	d
LAPACKtrsen_	include/petscblaslapack_uscore.h	258;"	d
LAPACKtrsen_	include/petscblaslapack_uscore.h	46;"	d
LAPACKtrsen_	include/petscblaslapack_uscore.h	88;"	d
LAPACKtrtrs_	include/petscblaslapack_c.h	134;"	d
LAPACKtrtrs_	include/petscblaslapack_c.h	176;"	d
LAPACKtrtrs_	include/petscblaslapack_c.h	50;"	d
LAPACKtrtrs_	include/petscblaslapack_c.h	92;"	d
LAPACKtrtrs_	include/petscblaslapack_caps.h	136;"	d
LAPACKtrtrs_	include/petscblaslapack_caps.h	178;"	d
LAPACKtrtrs_	include/petscblaslapack_caps.h	49;"	d
LAPACKtrtrs_	include/petscblaslapack_caps.h	91;"	d
LAPACKtrtrs_	include/petscblaslapack_uscore.h	133;"	d
LAPACKtrtrs_	include/petscblaslapack_uscore.h	177;"	d
LAPACKtrtrs_	include/petscblaslapack_uscore.h	219;"	d
LAPACKtrtrs_	include/petscblaslapack_uscore.h	49;"	d
LAPACKtrtrs_	include/petscblaslapack_uscore.h	91;"	d
LAPACKungqr_	include/petscblaslapack_c.h	12;"	d
LAPACKungqr_	include/petscblaslapack_c.h	140;"	d
LAPACKungqr_	include/petscblaslapack_c.h	54;"	d
LAPACKungqr_	include/petscblaslapack_c.h	98;"	d
LAPACKungqr_	include/petscblaslapack_caps.h	11;"	d
LAPACKungqr_	include/petscblaslapack_caps.h	140;"	d
LAPACKungqr_	include/petscblaslapack_caps.h	53;"	d
LAPACKungqr_	include/petscblaslapack_caps.h	98;"	d
LAPACKungqr_	include/petscblaslapack_qd.h	10;"	d
LAPACKungqr_	include/petscblaslapack_qd.h	44;"	d
LAPACKungqr_	include/petscblaslapack_stdcall.h	145;"	d
LAPACKungqr_	include/petscblaslapack_stdcall.h	203;"	d
LAPACKungqr_	include/petscblaslapack_stdcall.h	21;"	d
LAPACKungqr_	include/petscblaslapack_stdcall.h	83;"	d
LAPACKungqr_	include/petscblaslapack_uscore.h	11;"	d
LAPACKungqr_	include/petscblaslapack_uscore.h	139;"	d
LAPACKungqr_	include/petscblaslapack_uscore.h	181;"	d
LAPACKungqr_	include/petscblaslapack_uscore.h	223;"	d
LAPACKungqr_	include/petscblaslapack_uscore.h	53;"	d
LAPACKungqr_	include/petscblaslapack_uscore.h	95;"	d
LIBBASE	include/finclude/makefile	/^LIBBASE   = libpetscvec$/;"	m
LIBBASE	include/makefile	/^LIBBASE  = libpetscvec$/;"	m
LIBBASE	include/petsc-private/makefile	/^LIBBASE  = libpetscvec$/;"	m
LIBBASE	include/sieve/makefile	/^LIBBASE  = libpetscdm$/;"	m
LIBBASE	interfaces/lua/makefile	/^LIBBASE	  = libpetscsys$/;"	m
LIBBASE	interfaces/lua/src/makefile	/^LIBBASE	  = libpetscsys$/;"	m
LIBBASE	interfaces/makefile	/^LIBBASE	  = libpetscsys$/;"	m
LIBBASE	src/dm/dt/interface/makefile	/^LIBBASE  = libpetscdm$/;"	m
LIBBASE	src/dm/impls/mesh/f90-custom/makefile	/^LIBBASE  = libpetscdm$/;"	m
LIBBASE	src/dm/impls/mesh/ftn-custom/makefile	/^LIBBASE  = libpetscdm$/;"	m
LIBBASE	src/dm/impls/mesh/makefile	/^LIBBASE  = libpetscdm$/;"	m
LIBBASE	src/dm/impls/moab/makefile	/^LIBBASE  = libpetscdm$/;"	m
LIBBASE	src/dm/impls/plex/f90-custom/makefile	/^LIBBASE  = libpetscdm$/;"	m
LIBBASE	src/dm/impls/plex/ftn-custom/makefile	/^LIBBASE  = libpetscdm$/;"	m
LOCDIR	include/finclude/ftn-custom/makefile	/^LOCDIR   = include\/finclude\/ftn-custom\/$/;"	m
LOCDIR	include/finclude/makefile	/^LOCDIR    = include\/finclude\/$/;"	m
LOCDIR	include/makefile	/^LOCDIR   = include\/$/;"	m
LOCDIR	include/petsc-private/makefile	/^LOCDIR   = include\/petsc-private\/$/;"	m
LOCDIR	include/sieve/makefile	/^LOCDIR   = include\/sieve\/$/;"	m
LOCDIR	interfaces/lua/makefile	/^LOCDIR	  = interfaces\/lua\/$/;"	m
LOCDIR	interfaces/lua/src/makefile	/^LOCDIR	  = interfaces\/lua\/src\/$/;"	m
LOCDIR	interfaces/makefile	/^LOCDIR	  = interfaces\/$/;"	m
LOCDIR	src/dm/dt/examples/makefile	/^LOCDIR   = src\/dm\/dt\/examples\/$/;"	m
LOCDIR	src/dm/dt/examples/tests/makefile	/^LOCDIR          = src\/dm\/dt\/examples\/tests\/$/;"	m
LOCDIR	src/dm/dt/interface/makefile	/^LOCDIR   = src\/dm\/dt\/interface\/$/;"	m
LOCDIR	src/dm/dt/makefile	/^LOCDIR   = src\/dm\/dt\/$/;"	m
LOCDIR	src/dm/impls/mesh/examples/makefile	/^LOCDIR   = src\/dm\/impls\/mesh\/examples\/$/;"	m
LOCDIR	src/dm/impls/mesh/examples/tests/makefile	/^LOCDIR          = src\/dm\/impls\/mesh\/examples\/tests\/$/;"	m
LOCDIR	src/dm/impls/mesh/examples/tutorials/makefile	/^LOCDIR          = src\/dm\/impls\/mesh\/examples\/tutorials\/$/;"	m
LOCDIR	src/dm/impls/mesh/f90-custom/makefile	/^LOCDIR   = src\/dm\/impls\/mesh\/f90-custom\/$/;"	m
LOCDIR	src/dm/impls/mesh/ftn-custom/makefile	/^LOCDIR   = src\/dm\/impls\/mesh\/ftn-custom\/$/;"	m
LOCDIR	src/dm/impls/mesh/makefile	/^LOCDIR   = src\/dm\/impls\/mesh\/$/;"	m
LOCDIR	src/dm/impls/moab/examples/makefile	/^LOCDIR	 = src\/dm\/impls\/moab\/examples\/$/;"	m
LOCDIR	src/dm/impls/moab/examples/tests/makefile	/^LOCDIR          = src\/dm\/impls\/moab\/examples\/tests\/$/;"	m
LOCDIR	src/dm/impls/moab/makefile	/^LOCDIR   = src\/dm\/impls\/moab\/$/;"	m
LOCDIR	src/dm/impls/plex/examples/tests/makefile	/^LOCDIR          = src\/dm\/impls\/plex\/examples\/tests\/$/;"	m
LOCDIR	src/dm/impls/plex/f90-custom/makefile	/^LOCDIR   = src\/dm\/impls\/plex\/f90-custom\/$/;"	m
LOCDIR	src/dm/impls/plex/ftn-custom/makefile	/^LOCDIR   = src\/dm\/impls\/plex\/ftn-custom\/$/;"	m
LaGriT	include/petscdmmesh_formats.hh	/^  namespace LaGriT {$/;"	n	namespace:ALE
Label	include/web/AMSOptions.py	/^from pyjamas.ui.Label import Label$/;"	i
Label	include/web/AMSSnoopObjects.py	/^from pyjamas.ui.Label import Label$/;"	i
Label	include/web/AMSSnoopStack.py	/^from pyjamas.ui.Label import Label$/;"	i
LabelBaseSection	include/sieve/Sections.hh	/^    LabelBaseSection(const Obj<sieve_type>& sieve, const Obj<label_type>& label) : ParallelObject(sieve->comm(), sieve->debug()), _sieve(sieve), _label(label), _chart(*sieve->base()) {_sizes[0] = 1; _sizes[1] = 0;};$/;"	f	class:ALE::LabelBaseSection
LabelBaseSection	include/sieve/Sections.hh	/^  class LabelBaseSection : public ALE::ParallelObject {$/;"	c	namespace:ALE
LabelBaseSectionV	include/sieve/Sections.hh	/^    LabelBaseSectionV(const Obj<sieve_type>& sieve, const Obj<label_type>& label) : ParallelObject(sieve->comm(), sieve->debug()), _sieve(sieve), _label(label) {_sizes[0] = 1; _sizes[1] = 0;};$/;"	f	class:ALE::LabelBaseSectionV
LabelBaseSectionV	include/sieve/Sections.hh	/^  class LabelBaseSectionV : public ALE::ParallelObject {$/;"	c	namespace:ALE
LabelSection	include/sieve/Sections.hh	/^    LabelSection(const Obj<sieve_type>& sieve, const Obj<label_type>& label) : ParallelObject(sieve->comm(), sieve->debug()), _sieve(sieve), _label(label) {$/;"	f	class:ALE::LabelSection
LabelSection	include/sieve/Sections.hh	/^  class LabelSection : public ALE::ParallelObject {$/;"	c	namespace:ALE
LabelSifter	include/sieve/LabelSifter.hh	/^    LabelSifter(MPI_Comm comm = PETSC_COMM_SELF, const int& debug = 0) : _debug(debug) {$/;"	f	class:ALE::LabelSifter
LabelSifter	include/sieve/LabelSifter.hh	/^    LabelSifter(MPI_Comm comm, Alloc_& allocator, const int& debug) : _debug(debug), _arrows(allocator) {$/;"	f	class:ALE::LabelSifter
LabelSifter	include/sieve/LabelSifter.hh	/^  class LabelSifter { \/\/ class Sifter$/;"	c	namespace:ALE
LabelSifterSerializer	include/sieve/LabelSifter.hh	/^  class LabelSifterSerializer {$/;"	c	namespace:ALE
LabelTest	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^PetscErrorCode LabelTest(const Options *options)$/;"	f
LabelTest	src/dm/impls/mesh/examples/tests/mesh1.cxx	/^PetscErrorCode LabelTest(const Obj<ALE::Mesh>& mesh, const Obj<label_type>& label, Options *options)$/;"	f
LabelTests	src/dm/impls/mesh/examples/tests/sieveTests.cxx	/^PetscErrorCode LabelTests(const Options *options)$/;"	f
LabelVisitor	include/sieve/Mesh.hh	/^      LabelVisitor(label_type& l, const int defValue) : label(l), defaultValue(defValue), value(defValue) {};$/;"	f	class:ALE::IBundle::LabelVisitor
LabelVisitor	include/sieve/Mesh.hh	/^    class LabelVisitor {$/;"	c	class:ALE::IBundle
Lagrange	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^from FIAT.lagrange import Lagrange$/;"	i
Lagrange	bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py	/^from FIAT.lagrange import Lagrange$/;"	i
LanguageProcessor	config/BuildSystem/script.py	/^class LanguageProcessor(args.ArgumentProcessor):$/;"	c
LevelCoarsen	src/dm/impls/mesh/examples/tutorials/Coarsener.h	/^PetscErrorCode LevelCoarsen(Obj<ALE::Mesh>& mesh, int dim, ALE::Mesh::real_section_type::patch_type newPatch, bool includePrevious, float beta)$/;"	f	namespace:ALE::Coarsener
LibraryAdder	config/BuildSystem/build/processor.py	/^class LibraryAdder (build.transform.Transform):$/;"	c
LineSearchOps	include/petsc-private/linesearchimpl.h	/^typedef struct _LineSearchOps *LineSearchOps;$/;"	t	typeref:struct:_LineSearchOps
LineWidth	config/BuildSystem/logger.py	/^LineWidth = -1$/;"	v
LinearTest	src/dm/impls/mesh/examples/tests/section1-old.cxx	/^PetscErrorCode LinearTest(const Obj<section_type>& section, Options *options)$/;"	f
Link	include/sieve/SieveAlgorithms.hh	/^    static Obj<sieve_type> Link(const Obj<bundle_type>& bundle, const point_type& p) {$/;"	f	class:ALE::SieveAlg
LinkCheckerI	config/BuildSystem/build/processor.py	/^      import BS.LinkCheckerI.Checker$/;"	i
LinkError	config/BuildSystem/build/processor.py	/^      import BS.LinkError$/;"	i
Linker	config/BuildSystem/build/processor.py	/^class Linker(Processor):$/;"	c
Linker	config/BuildSystem/config/compile/C.py	/^class Linker(config.compile.processor.Processor):$/;"	c
Linker	config/BuildSystem/config/compile/CUDA.py	/^class Linker(config.compile.C.Linker):$/;"	c
Linker	config/BuildSystem/config/compile/Cxx.py	/^class Linker(config.compile.processor.Processor):$/;"	c
Linker	config/BuildSystem/config/compile/FC.py	/^class Linker(config.compile.processor.Processor):$/;"	c
ListBox	include/web/AMSOptions.py	/^from pyjamas.ui.ListBox import ListBox$/;"	i
ListBox	include/web/AMSSnoopObjects.py	/^from pyjamas.ui.ListBox import ListBox$/;"	i
ListBox	include/web/AMSSnoopStack.py	/^from pyjamas.ui.ListBox import ListBox$/;"	i
Loader	config/BuildSystem/build/templates/usingSIDL.py	/^      import SIDL.Loader$/;"	i
Loader	config/BuildSystem/checkdlllibs.py	/^import SIDL.Loader$/;"	i
Loader	config/BuildSystem/nargs.py	/^        import SIDL.Loader$/;"	i
Loader	config/BuildSystem/regression/testCase.py	/^      import ASE.Loader$/;"	i
Log	include/petsclog.hh	/^  class Log {$/;"	c	namespace:PETSc
Log	include/sieve/ALE_mem.hh	/^      Log(): num(0), total(0) {};$/;"	f	struct:ALE::MemoryLogger::Log
Log	include/sieve/ALE_mem.hh	/^    struct Log {$/;"	s	class:ALE::MemoryLogger
LogCookie	include/sieve/ALE_log.hh	/^  typedef PetscClassId LogCookie;$/;"	t	namespace:ALE
LogCookieRegister	src/dm/impls/mesh/ALE.cxx	/^  LogCookie LogCookieRegister(const char *name){$/;"	f	namespace:ALE
LogEvent	include/petsclog.hh	/^    LogEvent() : name(), id() {};$/;"	f	class:PETSc::LogEvent
LogEvent	include/petsclog.hh	/^    LogEvent(const LogEvent& event) : name(event.name), id(event.id) {};$/;"	f	class:PETSc::LogEvent
LogEvent	include/petsclog.hh	/^    LogEvent(const std::string& name, PetscLogEvent id) : name(name), id(id) {};$/;"	f	class:PETSc::LogEvent
LogEvent	include/petsclog.hh	/^  class LogEvent {$/;"	c	namespace:PETSc
LogEvent	include/sieve/ALE_log.hh	/^  typedef PetscLogEvent  LogEvent;$/;"	t	namespace:ALE
LogEventBegin	src/dm/impls/mesh/ALE.cxx	/^  void LogEventBegin(LogEvent e){$/;"	f	namespace:ALE
LogEventEnd	src/dm/impls/mesh/ALE.cxx	/^  void LogEventEnd(LogEvent e){$/;"	f	namespace:ALE
LogEventRegister	src/dm/impls/mesh/ALE.cxx	/^  LogEvent LogEventRegister(LogCookie cookie, const char *name) {$/;"	f	namespace:ALE
LogEventRegister	src/dm/impls/mesh/ALE.cxx	/^  LogEvent LogEventRegister(const char *name){$/;"	f	namespace:ALE
LogStage	include/petsclog.hh	/^    LogStage() : name(), id() {};$/;"	f	class:PETSc::LogStage
LogStage	include/petsclog.hh	/^    LogStage(const LogStage& stage) : name(stage.name), id(stage.id) {};$/;"	f	class:PETSc::LogStage
LogStage	include/petsclog.hh	/^    LogStage(const std::string& name, PetscLogStage id) : name(name), id(id) {};$/;"	f	class:PETSc::LogStage
LogStage	include/petsclog.hh	/^  class LogStage {$/;"	c	namespace:PETSc
LogStage	include/sieve/ALE_log.hh	/^  typedef int         LogStage;$/;"	t	namespace:ALE
LogStagePop	src/dm/impls/mesh/ALE.cxx	/^  void LogStagePop(int s){$/;"	f	namespace:ALE
LogStagePush	src/dm/impls/mesh/ALE.cxx	/^  void LogStagePush(int s){$/;"	f	namespace:ALE
LogStageRegister	src/dm/impls/mesh/ALE.cxx	/^  LogStage LogStageRegister(const char *name){$/;"	f	namespace:ALE
LogSummarizer	bin/processSummary.py	/^class LogSummarizer(script.Script):$/;"	c
Logger	config/BuildSystem/logger.py	/^class Logger(args.ArgumentProcessor):$/;"	c
LooseVersion	config/cmakeboot.py	/^   from distutils.version import LooseVersion$/;"	i
M	include/petsc-private/dmdaimpl.h	/^  PetscInt              M,N,P;                 \/* array dimensions *\/$/;"	m	struct:__anon23
M	include/petsc-private/matimpl.h	/^  PetscInt       M,N,m;            \/* total rows, columns; local rows *\/$/;"	m	struct:_p_MatFDColoring
M	include/petsc-private/matimpl.h	/^  PetscInt       M,N,m;            \/* total rows, columns; local rows *\/$/;"	m	struct:_p_MatTransposeColoring
MANSEC	include/finclude/makefile	/^MANSEC    = Sys$/;"	m
MANSEC	include/makefile	/^MANSEC   = Sys$/;"	m
MANSEC	include/petsc-private/makefile	/^MANSEC   = Sys$/;"	m
MANSEC	include/sieve/makefile	/^MANSEC   = DM$/;"	m
MANSEC	interfaces/lua/makefile	/^MANSEC	  = Sys$/;"	m
MANSEC	interfaces/lua/src/makefile	/^MANSEC	  = Sys$/;"	m
MANSEC	interfaces/makefile	/^MANSEC	  = Sys$/;"	m
MANSEC	src/dm/dt/examples/tests/makefile	/^MANSEC          = DM$/;"	m
MANSEC	src/dm/dt/interface/makefile	/^MANSEC   = DM$/;"	m
MANSEC	src/dm/dt/makefile	/^MANSEC    = DM$/;"	m
MANSEC	src/dm/impls/mesh/examples/tests/makefile	/^MANSEC          = DM$/;"	m
MANSEC	src/dm/impls/mesh/examples/tutorials/makefile	/^MANSEC          = DM$/;"	m
MANSEC	src/dm/impls/mesh/makefile	/^MANSEC   = DM$/;"	m
MANSEC	src/dm/impls/moab/examples/tests/makefile	/^MANSEC          = DM$/;"	m
MANSEC	src/dm/impls/moab/makefile	/^MANSEC   = DM$/;"	m
MANSEC	src/dm/impls/plex/examples/tests/makefile	/^MANSEC          = DM$/;"	m
MATAIJ	include/finclude/petscmatdef.h	72;"	d
MATAIJ	include/petscmat.h	33;"	d
MATAIJCRL	include/finclude/petscmatdef.h	75;"	d
MATAIJCRL	include/petscmat.h	38;"	d
MATAIJCUSP	include/finclude/petscmatdef.h	78;"	d
MATAIJCUSP	include/petscmat.h	41;"	d
MATAIJCUSPARSE	include/finclude/petscmatdef.h	81;"	d
MATAIJCUSPARSE	include/petscmat.h	44;"	d
MATAIJPERM	include/finclude/petscmatdef.h	84;"	d
MATAIJPERM	include/petscmat.h	47;"	d
MATAIJPTHREAD	include/petscmat.h	36;"	d
MATBAIJ	include/finclude/petscmatdef.h	92;"	d
MATBAIJ	include/petscmat.h	55;"	d
MATBLOCKMAT	include/finclude/petscmatdef.h	112;"	d
MATBLOCKMAT	include/petscmat.h	73;"	d
MATBSTRM	include/finclude/petscmatdef.h	102;"	d
MATBSTRM	include/petscmat.h	64;"	d
MATCOARSENHEM	include/petscmat.h	1199;"	d
MATCOARSENMIS	include/petscmat.h	1198;"	d
MATCOARSEN_MIS	include/finclude/petscmatdef.h	51;"	d
MATCOLORINGID	include/finclude/petscmatdef.h	56;"	d
MATCOLORINGID	include/petscmat.h	1028;"	d
MATCOLORINGLF	include/finclude/petscmatdef.h	55;"	d
MATCOLORINGLF	include/petscmat.h	1027;"	d
MATCOLORINGNATURAL	include/finclude/petscmatdef.h	53;"	d
MATCOLORINGNATURAL	include/petscmat.h	1025;"	d
MATCOLORINGSL	include/finclude/petscmatdef.h	54;"	d
MATCOLORINGSL	include/petscmat.h	1026;"	d
MATCOMPOSITE	include/finclude/petscmatdef.h	113;"	d
MATCOMPOSITE	include/petscmat.h	74;"	d
MATDAAD	include/finclude/petscmatdef.h	107;"	d
MATDAAD	include/petscmat.h	68;"	d
MATDENSE	include/finclude/petscmatdef.h	88;"	d
MATDENSE	include/petscmat.h	51;"	d
MATELEMENTAL	include/finclude/petscmatdef.h	91;"	d
MATELEMENTAL	include/petscmat.h	54;"	d
MATFFT	include/finclude/petscmatdef.h	114;"	d
MATFFT	include/petscmat.h	75;"	d
MATFFTW	include/finclude/petscmatdef.h	115;"	d
MATFFTW	include/petscmat.h	76;"	d
MATHYPRESSTRUCT	include/finclude/petscmatdef.h	121;"	d
MATHYPRESSTRUCT	include/petscmat.h	82;"	d
MATHYPRESTRUCT	include/finclude/petscmatdef.h	120;"	d
MATHYPRESTRUCT	include/petscmat.h	81;"	d
MATIS	include/finclude/petscmatdef.h	71;"	d
MATIS	include/petscmat.h	32;"	d
MATLABENGINE_CLASSID	include/petscmatlab.h	/^PETSC_EXTERN PetscClassId MATLABENGINE_CLASSID;$/;"	v
MATLOCALREF	include/finclude/petscmatdef.h	123;"	d
MATLOCALREF	include/petscmat.h	84;"	d
MATLRC	include/finclude/petscmatdef.h	110;"	d
MATLRC	include/petscmat.h	71;"	d
MATMAIJ	include/finclude/petscmatdef.h	68;"	d
MATMAIJ	include/petscmat.h	29;"	d
MATMFFD	include/finclude/petscmatdef.h	108;"	d
MATMFFD	include/petscmat.h	69;"	d
MATMFFD_CLASSID	include/petscmat.h	/^PETSC_EXTERN PetscClassId MATMFFD_CLASSID;$/;"	v
MATMFFD_DEFAULT	include/finclude/petscsnesdef.h	80;"	d
MATMFFD_DS	include/petscmat.h	1486;"	d
MATMFFD_Mult	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MATMFFD_Mult;$/;"	v
MATMFFD_WP	include/finclude/petscsnesdef.h	81;"	d
MATMFFD_WP	include/petscmat.h	1487;"	d
MATMPIADJ	include/finclude/petscmatdef.h	95;"	d
MATMPIADJ	include/petscmat.h	58;"	d
MATMPIAIJ	include/finclude/petscmatdef.h	74;"	d
MATMPIAIJ	include/petscmat.h	37;"	d
MATMPIAIJCRL	include/finclude/petscmatdef.h	77;"	d
MATMPIAIJCRL	include/petscmat.h	40;"	d
MATMPIAIJCUSP	include/finclude/petscmatdef.h	80;"	d
MATMPIAIJCUSP	include/petscmat.h	43;"	d
MATMPIAIJCUSPARSE	include/finclude/petscmatdef.h	83;"	d
MATMPIAIJCUSPARSE	include/petscmat.h	46;"	d
MATMPIAIJPERM	include/finclude/petscmatdef.h	86;"	d
MATMPIAIJPERM	include/petscmat.h	49;"	d
MATMPIBAIJ	include/finclude/petscmatdef.h	94;"	d
MATMPIBAIJ	include/petscmat.h	57;"	d
MATMPIBSTRM	include/finclude/petscmatdef.h	101;"	d
MATMPIBSTRM	include/petscmat.h	63;"	d
MATMPIDENSE	include/finclude/petscmatdef.h	90;"	d
MATMPIDENSE	include/petscmat.h	53;"	d
MATMPIMAIJ	include/finclude/petscmatdef.h	70;"	d
MATMPIMAIJ	include/petscmat.h	31;"	d
MATMPISBAIJ	include/finclude/petscmatdef.h	98;"	d
MATMPISBAIJ	include/petscmat.h	61;"	d
MATMPISBSTRM	include/finclude/petscmatdef.h	104;"	d
MATMPISBSTRM	include/petscmat.h	66;"	d
MATNEST	include/finclude/petscmatdef.h	124;"	d
MATNEST	include/petscmat.h	85;"	d
MATNORMAL	include/finclude/petscmatdef.h	109;"	d
MATNORMAL	include/petscmat.h	70;"	d
MATOP_ASSEMBLY_BEGIN	include/petscmat.h	/^               MATOP_ASSEMBLY_BEGIN=20,$/;"	e	enum:__anon102
MATOP_ASSEMBLY_END	include/petscmat.h	/^               MATOP_ASSEMBLY_END=21,$/;"	e	enum:__anon102
MATOP_AXPY	include/petscmat.h	/^               MATOP_AXPY=39,$/;"	e	enum:__anon102
MATOP_AYPX	include/petscmat.h	/^               MATOP_AYPX=140$/;"	e	enum:__anon102
MATOP_BACKWARD_SOLVE	include/petscmat.h	/^               MATOP_BACKWARD_SOLVE=36,$/;"	e	enum:__anon102
MATOP_CHOLESKYFACTOR	include/petscmat.h	/^               MATOP_CHOLESKYFACTOR=12,$/;"	e	enum:__anon102
MATOP_CHOLESKY_FACTOR_NUMERIC	include/petscmat.h	/^               MATOP_CHOLESKY_FACTOR_NUMERIC=28,$/;"	e	enum:__anon102
MATOP_CHOLESKY_FACTOR_SYMBOLIC	include/petscmat.h	/^               MATOP_CHOLESKY_FACTOR_SYMBOLIC=27,$/;"	e	enum:__anon102
MATOP_COLORING_PATCH	include/petscmat.h	/^               MATOP_COLORING_PATCH=55,$/;"	e	enum:__anon102
MATOP_CONJUGATE	include/petscmat.h	/^               MATOP_CONJUGATE=102,$/;"	e	enum:__anon102
MATOP_CONVERT	include/petscmat.h	/^               MATOP_CONVERT=71,$/;"	e	enum:__anon102
MATOP_CONVERT_FROM	include/petscmat.h	/^               MATOP_CONVERT_FROM=62,$/;"	e	enum:__anon102
MATOP_COPY	include/petscmat.h	/^               MATOP_COPY=43,$/;"	e	enum:__anon102
MATOP_CREATE	include/petscmat.h	/^               MATOP_CREATE=115,$/;"	e	enum:__anon102
MATOP_DESTROY	include/petscmat.h	/^               MATOP_DESTROY=60,$/;"	e	enum:__anon102
MATOP_DIAGONAL_SCALE	include/petscmat.h	/^               MATOP_DIAGONAL_SCALE=18,$/;"	e	enum:__anon102
MATOP_DIAGONAL_SET	include/petscmat.h	/^               MATOP_DIAGONAL_SET=47,$/;"	e	enum:__anon102
MATOP_DUMMY100	include/petscmat.h	/^               MATOP_DUMMY100=100,$/;"	e	enum:__anon102
MATOP_DUMMY101	include/petscmat.h	/^               MATOP_DUMMY101=101,$/;"	e	enum:__anon102
MATOP_DUMMY98	include/petscmat.h	/^               MATOP_DUMMY98=98,$/;"	e	enum:__anon102
MATOP_DUMMY99	include/petscmat.h	/^               MATOP_DUMMY99=99,$/;"	e	enum:__anon102
MATOP_DUPLICATE	include/petscmat.h	/^               MATOP_DUPLICATE=34,$/;"	e	enum:__anon102
MATOP_EQUAL	include/petscmat.h	/^               MATOP_EQUAL=16,$/;"	e	enum:__anon102
MATOP_FDCOLORING_CREATE	include/petscmat.h	/^               MATOP_FDCOLORING_CREATE=54,$/;"	e	enum:__anon102
MATOP_FD_COLORING_APPLY	include/petscmat.h	/^               MATOP_FD_COLORING_APPLY=75,$/;"	e	enum:__anon102
MATOP_FORWARD_SOLVE	include/petscmat.h	/^               MATOP_FORWARD_SOLVE=35,$/;"	e	enum:__anon102
MATOP_GETINFO	include/petscmat.h	/^               MATOP_GETINFO=15,$/;"	e	enum:__anon102
MATOP_GET_ARRAY	include/petscmat.h	/^               MATOP_GET_ARRAY=32,$/;"	e	enum:__anon102
MATOP_GET_COLUMN_IJ	include/petscmat.h	/^               MATOP_GET_COLUMN_IJ=52,$/;"	e	enum:__anon102
MATOP_GET_COLUMN_NORMS	include/petscmat.h	/^               MATOP_GET_COLUMN_NORMS=125,$/;"	e	enum:__anon102
MATOP_GET_COLUMN_VECTOR	include/petscmat.h	/^               MATOP_GET_COLUMN_VECTOR=112,$/;"	e	enum:__anon102
MATOP_GET_DIAGONAL	include/petscmat.h	/^               MATOP_GET_DIAGONAL=17,$/;"	e	enum:__anon102
MATOP_GET_GHOSTS	include/petscmat.h	/^               MATOP_GET_GHOSTS=116,$/;"	e	enum:__anon102
MATOP_GET_INERTIA	include/petscmat.h	/^               MATOP_GET_INERTIA=82,$/;"	e	enum:__anon102
MATOP_GET_LOCAL_SUB_MATRIX	include/petscmat.h	/^               MATOP_GET_LOCAL_SUB_MATRIX=117,$/;"	e	enum:__anon102
MATOP_GET_MULTI_PROC_BLOCK	include/petscmat.h	/^               MATOP_GET_MULTI_PROC_BLOCK=123,$/;"	e	enum:__anon102
MATOP_GET_REDUNDANT_MATRIX	include/petscmat.h	/^               MATOP_GET_REDUNDANT_MATRIX=110,$/;"	e	enum:__anon102
MATOP_GET_ROW	include/petscmat.h	/^               MATOP_GET_ROW=1,$/;"	e	enum:__anon102
MATOP_GET_ROW_IJ	include/petscmat.h	/^               MATOP_GET_ROW_IJ=50,$/;"	e	enum:__anon102
MATOP_GET_ROW_MAX	include/petscmat.h	/^               MATOP_GET_ROW_MAX=44,$/;"	e	enum:__anon102
MATOP_GET_ROW_MAX_ABS	include/petscmat.h	/^               MATOP_GET_ROW_MAX_ABS=69,$/;"	e	enum:__anon102
MATOP_GET_ROW_MIN	include/petscmat.h	/^               MATOP_GET_ROW_MIN=111,$/;"	e	enum:__anon102
MATOP_GET_ROW_MIN_ABS	include/petscmat.h	/^               MATOP_GET_ROW_MIN_ABS=70,$/;"	e	enum:__anon102
MATOP_GET_ROW_UPPER_TRIANGULAR	include/petscmat.h	/^               MATOP_GET_ROW_UPPER_TRIANGULAR=107,$/;"	e	enum:__anon102
MATOP_GET_SEQ_NONZERO_STRUCTUR	include/petscmat.h	/^               MATOP_GET_SEQ_NONZERO_STRUCTUR=114,$/;"	e	enum:__anon102
MATOP_GET_SUBMATRICES	include/petscmat.h	/^               MATOP_GET_SUBMATRICES=40,$/;"	e	enum:__anon102
MATOP_GET_SUBMATRIX	include/petscmat.h	/^               MATOP_GET_SUBMATRIX=59,$/;"	e	enum:__anon102
MATOP_GET_SUB_MATRICES_PARALLE	include/petscmat.h	/^               MATOP_GET_SUB_MATRICES_PARALLE=128,$/;"	e	enum:__anon102
MATOP_GET_VALUES	include/petscmat.h	/^               MATOP_GET_VALUES=42,$/;"	e	enum:__anon102
MATOP_GET_VECS	include/petscmat.h	/^               MATOP_GET_VECS=88,$/;"	e	enum:__anon102
MATOP_HERMITIAN_TRANSPOSE	include/petscmat.h	/^               MATOP_HERMITIAN_TRANSPOSE=120,$/;"	e	enum:__anon102
MATOP_ICCFACTOR	include/petscmat.h	/^               MATOP_ICCFACTOR=38,$/;"	e	enum:__anon102
MATOP_ICCFACTOR_SYMBOLIC	include/petscmat.h	/^               MATOP_ICCFACTOR_SYMBOLIC=31,$/;"	e	enum:__anon102
MATOP_ILUDT_FACTOR	include/petscmat.h	/^               MATOP_ILUDT_FACTOR=48,$/;"	e	enum:__anon102
MATOP_ILUFACTOR	include/petscmat.h	/^               MATOP_ILUFACTOR=37,$/;"	e	enum:__anon102
MATOP_ILUFACTOR_SYMBOLIC	include/petscmat.h	/^               MATOP_ILUFACTOR_SYMBOLIC=30,$/;"	e	enum:__anon102
MATOP_IMAGINARY_PART	include/petscmat.h	/^               MATOP_IMAGINARY_PART=106,$/;"	e	enum:__anon102
MATOP_INCREASE_OVERLAP	include/petscmat.h	/^               MATOP_INCREASE_OVERLAP=41,$/;"	e	enum:__anon102
MATOP_IS_HERMITIAN	include/petscmat.h	/^               MATOP_IS_HERMITIAN=85,$/;"	e	enum:__anon102
MATOP_IS_STRUCTURALLY_SYMMETRIC	include/petscmat.h	/^               MATOP_IS_STRUCTURALLY_SYMMETRIC=86,$/;"	e	enum:__anon102
MATOP_IS_SYMMETRIC	include/petscmat.h	/^               MATOP_IS_SYMMETRIC=84,$/;"	e	enum:__anon102
MATOP_LOAD	include/petscmat.h	/^               MATOP_LOAD=83,$/;"	e	enum:__anon102
MATOP_LUFACTOR	include/petscmat.h	/^               MATOP_LUFACTOR=11,$/;"	e	enum:__anon102
MATOP_LUFACTOR_NUMERIC	include/petscmat.h	/^               MATOP_LUFACTOR_NUMERIC=26,$/;"	e	enum:__anon102
MATOP_LUFACTOR_SYMBOLIC	include/petscmat.h	/^               MATOP_LUFACTOR_SYMBOLIC=25,$/;"	e	enum:__anon102
MATOP_MATMAT_MULT	include/petscmat.h	/^               MATOP_MATMAT_MULT=63,$/;"	e	enum:__anon102
MATOP_MATMAT_MULT_NUMERIC	include/petscmat.h	/^               MATOP_MATMAT_MULT_NUMERIC=65,$/;"	e	enum:__anon102
MATOP_MATMAT_MULT_SYMBOLIC	include/petscmat.h	/^               MATOP_MATMAT_MULT_SYMBOLIC=64,$/;"	e	enum:__anon102
MATOP_MAT_MULT	include/petscmat.h	/^               MATOP_MAT_MULT=89,$/;"	e	enum:__anon102
MATOP_MAT_MULT_NUMERIC	include/petscmat.h	/^               MATOP_MAT_MULT_NUMERIC=91,$/;"	e	enum:__anon102
MATOP_MAT_MULT_SYMBOLIC	include/petscmat.h	/^               MATOP_MAT_MULT_SYMBOLIC=90,$/;"	e	enum:__anon102
MATOP_MAT_SOLVE	include/petscmat.h	/^               MATOP_MAT_SOLVE=109,$/;"	e	enum:__anon102
MATOP_MAT_TRANSPOSE_MULT	include/petscmat.h	/^               MATOP_MAT_TRANSPOSE_MULT=95,$/;"	e	enum:__anon102
MATOP_MAT_TRANSPOSE_MULT_NUMER	include/petscmat.h	/^               MATOP_MAT_TRANSPOSE_MULT_NUMER=97,$/;"	e	enum:__anon102
MATOP_MAT_TRANSPOSE_MULT_SYMBO	include/petscmat.h	/^               MATOP_MAT_TRANSPOSE_MULT_SYMBO=96,$/;"	e	enum:__anon102
MATOP_MISSING_DIAGONAL	include/petscmat.h	/^               MATOP_MISSING_DIAGONAL=113,$/;"	e	enum:__anon102
MATOP_MULT	include/petscmat.h	/^               MATOP_MULT=3,$/;"	e	enum:__anon102
MATOP_MULT_ADD	include/petscmat.h	/^               MATOP_MULT_ADD=4,$/;"	e	enum:__anon102
MATOP_MULT_CONSTRAINED	include/petscmat.h	/^               MATOP_MULT_CONSTRAINED=77,$/;"	e	enum:__anon102
MATOP_MULT_DIAGONAL_BLOCK	include/petscmat.h	/^               MATOP_MULT_DIAGONAL_BLOCK=119,$/;"	e	enum:__anon102
MATOP_MULT_HERMITIAN_TRANSPOSE	include/petscmat.h	/^               MATOP_MULT_HERMITIAN_TRANSPOSE=121,$/;"	e	enum:__anon102
MATOP_MULT_HERMITIAN_TRANS_ADD	include/petscmat.h	/^               MATOP_MULT_HERMITIAN_TRANS_ADD=122,$/;"	e	enum:__anon102
MATOP_MULT_MULTIPLE	include/petscmat.h	/^               MATOP_MULT_MULTIPLE=80,$/;"	e	enum:__anon102
MATOP_MULT_TRANSPOSE	include/petscmat.h	/^               MATOP_MULT_TRANSPOSE=5,$/;"	e	enum:__anon102
MATOP_MULT_TRANSPOSE_ADD	include/petscmat.h	/^               MATOP_MULT_TRANSPOSE_ADD=6,$/;"	e	enum:__anon102
MATOP_MULT_TRANSPOSE_CONSTRAIN	include/petscmat.h	/^               MATOP_MULT_TRANSPOSE_CONSTRAIN=78,$/;"	e	enum:__anon102
MATOP_NORM	include/petscmat.h	/^               MATOP_NORM=19,$/;"	e	enum:__anon102
MATOP_PERMUTE	include/petscmat.h	/^               MATOP_PERMUTE=57,$/;"	e	enum:__anon102
MATOP_PERMUTE_SPARSIFY	include/petscmat.h	/^               MATOP_PERMUTE_SPARSIFY=79,$/;"	e	enum:__anon102
MATOP_PLACEHOLDER	include/petscmat.h	/^               MATOP_PLACEHOLDER=73,$/;"	e	enum:__anon102
MATOP_PTAP	include/petscmat.h	/^               MATOP_PTAP=92,$/;"	e	enum:__anon102
MATOP_PTAP_NUMERIC	include/petscmat.h	/^               MATOP_PTAP_NUMERIC=94,$/;"	e	enum:__anon102
MATOP_PTAP_SYMBOLIC	include/petscmat.h	/^               MATOP_PTAP_SYMBOLIC=93,$/;"	e	enum:__anon102
MATOP_RART	include/petscmat.h	/^               MATOP_RART=136,$/;"	e	enum:__anon102
MATOP_RART_NUMERIC	include/petscmat.h	/^               MATOP_RART_NUMERIC=138,$/;"	e	enum:__anon102
MATOP_RART_SYMBOLIC	include/petscmat.h	/^               MATOP_RART_SYMBOLIC=137,$/;"	e	enum:__anon102
MATOP_REAL_PART	include/petscmat.h	/^               MATOP_REAL_PART=105,$/;"	e	enum:__anon102
MATOP_RESTORE_ARRAY	include/petscmat.h	/^               MATOP_RESTORE_ARRAY=33,$/;"	e	enum:__anon102
MATOP_RESTORE_COLUMN_IJ	include/petscmat.h	/^               MATOP_RESTORE_COLUMN_IJ=53,$/;"	e	enum:__anon102
MATOP_RESTORE_LOCALSUB_MATRIX	include/petscmat.h	/^               MATOP_RESTORE_LOCALSUB_MATRIX=118,$/;"	e	enum:__anon102
MATOP_RESTORE_ROW	include/petscmat.h	/^               MATOP_RESTORE_ROW=2,$/;"	e	enum:__anon102
MATOP_RESTORE_ROW_IJ	include/petscmat.h	/^               MATOP_RESTORE_ROW_IJ=51,$/;"	e	enum:__anon102
MATOP_RESTORE_ROW_UPPER_TRIANG	include/petscmat.h	/^               MATOP_RESTORE_ROW_UPPER_TRIANG=108,$/;"	e	enum:__anon102
MATOP_SCALE	include/petscmat.h	/^               MATOP_SCALE=45,$/;"	e	enum:__anon102
MATOP_SETUP_PREALLOCATION	include/petscmat.h	/^               MATOP_SETUP_PREALLOCATION=29,$/;"	e	enum:__anon102
MATOP_SET_BLOCK_SIZE	include/petscmat.h	/^               MATOP_SET_BLOCK_SIZE=49,$/;"	e	enum:__anon102
MATOP_SET_BLOCK_SIZES	include/petscmat.h	/^               MATOP_SET_BLOCK_SIZES=139,$/;"	e	enum:__anon102
MATOP_SET_COLORING	include/petscmat.h	/^               MATOP_SET_COLORING=72,$/;"	e	enum:__anon102
MATOP_SET_FROM_OPTIONS	include/petscmat.h	/^               MATOP_SET_FROM_OPTIONS=76,$/;"	e	enum:__anon102
MATOP_SET_LOCAL_TO_GLOBAL_MAP	include/petscmat.h	/^               MATOP_SET_LOCAL_TO_GLOBAL_MAP=66,$/;"	e	enum:__anon102
MATOP_SET_OPTION	include/petscmat.h	/^               MATOP_SET_OPTION=22,$/;"	e	enum:__anon102
MATOP_SET_SIZES	include/petscmat.h	/^               MATOP_SET_SIZES=103,$/;"	e	enum:__anon102
MATOP_SET_UNFACTORED	include/petscmat.h	/^               MATOP_SET_UNFACTORED=56,$/;"	e	enum:__anon102
MATOP_SET_VALUES	include/petscmat.h	/^typedef enum { MATOP_SET_VALUES=0,$/;"	e	enum:__anon102
MATOP_SET_VALUES_ADIFOR	include/petscmat.h	/^               MATOP_SET_VALUES_ADIFOR=74,$/;"	e	enum:__anon102
MATOP_SET_VALUES_BATCH	include/petscmat.h	/^               MATOP_SET_VALUES_BATCH=129,$/;"	e	enum:__anon102
MATOP_SET_VALUES_BLOCKED	include/petscmat.h	/^               MATOP_SET_VALUES_BLOCKED=58,$/;"	e	enum:__anon102
MATOP_SET_VALUES_BLOCKEDLOCAL	include/petscmat.h	/^               MATOP_SET_VALUES_BLOCKEDLOCAL=87,$/;"	e	enum:__anon102
MATOP_SET_VALUES_LOCAL	include/petscmat.h	/^               MATOP_SET_VALUES_LOCAL=67,$/;"	e	enum:__anon102
MATOP_SET_VALUES_ROW	include/petscmat.h	/^               MATOP_SET_VALUES_ROW=104,$/;"	e	enum:__anon102
MATOP_SHIFT	include/petscmat.h	/^               MATOP_SHIFT=46,$/;"	e	enum:__anon102
MATOP_SOLVE	include/petscmat.h	/^               MATOP_SOLVE=7,$/;"	e	enum:__anon102
MATOP_SOLVE_ADD	include/petscmat.h	/^               MATOP_SOLVE_ADD=8,$/;"	e	enum:__anon102
MATOP_SOLVE_MULTIPLE	include/petscmat.h	/^               MATOP_SOLVE_MULTIPLE=81,$/;"	e	enum:__anon102
MATOP_SOLVE_TRANSPOSE	include/petscmat.h	/^               MATOP_SOLVE_TRANSPOSE=9,$/;"	e	enum:__anon102
MATOP_SOLVE_TRANSPOSE_ADD	include/petscmat.h	/^               MATOP_SOLVE_TRANSPOSE_ADD=10,$/;"	e	enum:__anon102
MATOP_SOR	include/petscmat.h	/^               MATOP_SOR=13,$/;"	e	enum:__anon102
MATOP_TRANSPOSE	include/petscmat.h	/^               MATOP_TRANSPOSE=14,$/;"	e	enum:__anon102
MATOP_TRANSPOSE_COLORING_CREAT	include/petscmat.h	/^               MATOP_TRANSPOSE_COLORING_CREAT=133,$/;"	e	enum:__anon102
MATOP_TRANSPOSE_MAT_MULT	include/petscmat.h	/^               MATOP_TRANSPOSE_MAT_MULT=130,$/;"	e	enum:__anon102
MATOP_TRANSPOSE_MAT_MULT_NUMER	include/petscmat.h	/^               MATOP_TRANSPOSE_MAT_MULT_NUMER=132,$/;"	e	enum:__anon102
MATOP_TRANSPOSE_MAT_MULT_SYMBO	include/petscmat.h	/^               MATOP_TRANSPOSE_MAT_MULT_SYMBO=131,$/;"	e	enum:__anon102
MATOP_TRANS_COLORING_APPLY_DEN	include/petscmat.h	/^               MATOP_TRANS_COLORING_APPLY_DEN=135,$/;"	e	enum:__anon102
MATOP_TRANS_COLORING_APPLY_SPT	include/petscmat.h	/^               MATOP_TRANS_COLORING_APPLY_SPT=134,$/;"	e	enum:__anon102
MATOP_VIEW	include/petscmat.h	/^               MATOP_VIEW=61,$/;"	e	enum:__anon102
MATOP_ZERO_ENTRIES	include/petscmat.h	/^               MATOP_ZERO_ENTRIES=23,$/;"	e	enum:__anon102
MATOP_ZERO_ROWS	include/petscmat.h	/^               MATOP_ZERO_ROWS=24,$/;"	e	enum:__anon102
MATOP_ZERO_ROWS_LOCAL	include/petscmat.h	/^               MATOP_ZERO_ROWS_LOCAL=68,$/;"	e	enum:__anon102
MATORDERING1WD	include/finclude/petscmatdef.h	60;"	d
MATORDERING1WD	include/petscmat.h	917;"	d
MATORDERINGAMD	include/petscmat.h	921;"	d
MATORDERINGNATURAL	include/finclude/petscmatdef.h	58;"	d
MATORDERINGNATURAL	include/petscmat.h	915;"	d
MATORDERINGND	include/finclude/petscmatdef.h	59;"	d
MATORDERINGND	include/petscmat.h	916;"	d
MATORDERINGQMD	include/finclude/petscmatdef.h	62;"	d
MATORDERINGQMD	include/petscmat.h	919;"	d
MATORDERINGRCM	include/finclude/petscmatdef.h	61;"	d
MATORDERINGRCM	include/petscmat.h	918;"	d
MATORDERINGROWLENGTH	include/finclude/petscmatdef.h	63;"	d
MATORDERINGROWLENGTH	include/petscmat.h	920;"	d
MATPARTITIONINGCHACO	include/petscmat.h	1104;"	d
MATPARTITIONINGCURRENT	include/petscmat.h	1101;"	d
MATPARTITIONINGPARMETIS	include/petscmat.h	1103;"	d
MATPARTITIONINGPARTY	include/petscmat.h	1105;"	d
MATPARTITIONINGPTSCOTCH	include/petscmat.h	1106;"	d
MATPARTITIONINGSQUARE	include/petscmat.h	1102;"	d
MATPARTITIONING_CURRENT	include/finclude/petscmatdef.h	48;"	d
MATPARTITIONING_PARMETIS	include/finclude/petscmatdef.h	49;"	d
MATPYTHON	include/finclude/petscmatdef.h	119;"	d
MATPYTHON	include/petscmat.h	80;"	d
MATRIX_BINARY_FORMAT_DENSE	include/petscmat.h	1402;"	d
MATSAME	include/finclude/petscmatdef.h	67;"	d
MATSAME	include/petscmat.h	28;"	d
MATSBAIJ	include/finclude/petscmatdef.h	96;"	d
MATSBAIJ	include/petscmat.h	59;"	d
MATSBSTRM	include/finclude/petscmatdef.h	105;"	d
MATSBSTRM	include/petscmat.h	67;"	d
MATSCATTER	include/finclude/petscmatdef.h	111;"	d
MATSCATTER	include/petscmat.h	72;"	d
MATSCHURCOMPLEMENT	include/finclude/petscmatdef.h	118;"	d
MATSCHURCOMPLEMENT	include/petscmat.h	79;"	d
MATSEQAIJ	include/finclude/petscmatdef.h	73;"	d
MATSEQAIJ	include/petscmat.h	34;"	d
MATSEQAIJCRL	include/finclude/petscmatdef.h	76;"	d
MATSEQAIJCRL	include/petscmat.h	39;"	d
MATSEQAIJCUSP	include/finclude/petscmatdef.h	79;"	d
MATSEQAIJCUSP	include/petscmat.h	42;"	d
MATSEQAIJCUSPARSE	include/finclude/petscmatdef.h	82;"	d
MATSEQAIJCUSPARSE	include/petscmat.h	45;"	d
MATSEQAIJPERM	include/finclude/petscmatdef.h	85;"	d
MATSEQAIJPERM	include/petscmat.h	48;"	d
MATSEQAIJPTHREAD	include/petscmat.h	35;"	d
MATSEQBAIJ	include/finclude/petscmatdef.h	93;"	d
MATSEQBAIJ	include/petscmat.h	56;"	d
MATSEQBSTRM	include/finclude/petscmatdef.h	100;"	d
MATSEQBSTRM	include/petscmat.h	62;"	d
MATSEQCUFFT	include/finclude/petscmatdef.h	116;"	d
MATSEQCUFFT	include/petscmat.h	77;"	d
MATSEQDENSE	include/finclude/petscmatdef.h	89;"	d
MATSEQDENSE	include/petscmat.h	52;"	d
MATSEQMAIJ	include/finclude/petscmatdef.h	69;"	d
MATSEQMAIJ	include/petscmat.h	30;"	d
MATSEQSBAIJ	include/finclude/petscmatdef.h	97;"	d
MATSEQSBAIJ	include/petscmat.h	60;"	d
MATSEQSBSTRM	include/finclude/petscmatdef.h	103;"	d
MATSEQSBSTRM	include/petscmat.h	65;"	d
MATSEQUSFFT	include/petscdmda.h	39;"	d
MATSHELL	include/finclude/petscmatdef.h	87;"	d
MATSHELL	include/petscmat.h	50;"	d
MATSOLVERBAS	include/finclude/petscmatdef.h	138;"	d
MATSOLVERBAS	include/petscmat.h	109;"	d
MATSOLVERBSTRM	include/finclude/petscmatdef.h	140;"	d
MATSOLVERBSTRM	include/petscmat.h	111;"	d
MATSOLVERCHOLMOD	include/finclude/petscmatdef.h	131;"	d
MATSOLVERCHOLMOD	include/petscmat.h	102;"	d
MATSOLVERCLIQUE	include/petscmat.h	114;"	d
MATSOLVERCUSPARSE	include/finclude/petscmatdef.h	139;"	d
MATSOLVERCUSPARSE	include/petscmat.h	110;"	d
MATSOLVERELEMENTAL	include/petscmat.h	113;"	d
MATSOLVERESSL	include/finclude/petscmatdef.h	132;"	d
MATSOLVERESSL	include/petscmat.h	103;"	d
MATSOLVERLUSOL	include/finclude/petscmatdef.h	133;"	d
MATSOLVERLUSOL	include/petscmat.h	104;"	d
MATSOLVERMATLAB	include/finclude/petscmatdef.h	136;"	d
MATSOLVERMATLAB	include/petscmat.h	107;"	d
MATSOLVERMUMPS	include/finclude/petscmatdef.h	134;"	d
MATSOLVERMUMPS	include/petscmat.h	105;"	d
MATSOLVERPASTIX	include/finclude/petscmatdef.h	135;"	d
MATSOLVERPASTIX	include/petscmat.h	106;"	d
MATSOLVERPETSC	include/finclude/petscmatdef.h	137;"	d
MATSOLVERPETSC	include/petscmat.h	108;"	d
MATSOLVERSBSTRM	include/finclude/petscmatdef.h	141;"	d
MATSOLVERSBSTRM	include/petscmat.h	112;"	d
MATSOLVERSUPERLU	include/finclude/petscmatdef.h	128;"	d
MATSOLVERSUPERLU	include/petscmat.h	99;"	d
MATSOLVERSUPERLU_DIST	include/finclude/petscmatdef.h	129;"	d
MATSOLVERSUPERLU_DIST	include/petscmat.h	100;"	d
MATSOLVERUMFPACK	include/finclude/petscmatdef.h	130;"	d
MATSOLVERUMFPACK	include/petscmat.h	101;"	d
MATSUBMATRIX	include/finclude/petscmatdef.h	122;"	d
MATSUBMATRIX	include/petscmat.h	83;"	d
MATTRANSPOSEMAT	include/finclude/petscmatdef.h	117;"	d
MATTRANSPOSEMAT	include/petscmat.h	78;"	d
MATTSDISPLAY	src/dm/impls/mesh/examples/tests/makefile	/^MATTSDISPLAY    = :0.0$/;"	m
MATTSDISPLAY	src/dm/impls/mesh/examples/tutorials/makefile	/^MATTSDISPLAY         = :0.0$/;"	m
MAT_AXPY	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_IncreaseOverlap, MAT_Partitioning, MAT_Coarsen, MAT_ZeroEntries, MAT_Load, MAT_View, MAT_AXPY, MAT_FDColoringCreate, MAT_TransposeColoringCreate;$/;"	v
MAT_Applypapt	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_Applypapt, MAT_Applypapt_symbolic, MAT_Applypapt_numeric;$/;"	v
MAT_Applypapt_numeric	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_Applypapt, MAT_Applypapt_symbolic, MAT_Applypapt_numeric;$/;"	v
MAT_Applypapt_symbolic	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_Applypapt, MAT_Applypapt_symbolic, MAT_Applypapt_numeric;$/;"	v
MAT_AssemblyBegin	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_ILUFactorSymbolic, MAT_ICCFactorSymbolic, MAT_Copy, MAT_Convert, MAT_Scale, MAT_AssemblyBegin;$/;"	v
MAT_AssemblyEnd	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_AssemblyEnd, MAT_SetValues, MAT_GetValues, MAT_GetRow, MAT_GetRowIJ, MAT_GetSubMatrices, MAT_GetColoring, MAT_GetOrdering, MAT_GetRedundantMatrix;$/;"	v
MAT_BackwardSolve	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_SolveTransposeAdd, MAT_SOR, MAT_ForwardSolve, MAT_BackwardSolve, MAT_LUFactor, MAT_LUFactorSymbolic;$/;"	v
MAT_CHECK_COMPRESSED_ROW	include/petscmat.h	/^              MAT_CHECK_COMPRESSED_ROW = 11,$/;"	e	enum:__anon91
MAT_CLASSID	include/petscmat.h	/^PETSC_EXTERN PetscClassId MAT_CLASSID;$/;"	v
MAT_COARSEN_CLASSID	include/petscmat.h	/^PETSC_EXTERN PetscClassId MAT_COARSEN_CLASSID;$/;"	v
MAT_COMPOSITE_ADDITIVE	include/petscmat.h	/^typedef enum {MAT_COMPOSITE_ADDITIVE,MAT_COMPOSITE_MULTIPLICATIVE} MatCompositeType;$/;"	e	enum:__anon88
MAT_COMPOSITE_MULTIPLICATIVE	include/petscmat.h	/^typedef enum {MAT_COMPOSITE_ADDITIVE,MAT_COMPOSITE_MULTIPLICATIVE} MatCompositeType;$/;"	e	enum:__anon88
MAT_COPY_VALUES	include/petscmat.h	/^typedef enum {MAT_DO_NOT_COPY_VALUES,MAT_COPY_VALUES,MAT_SHARE_NONZERO_PATTERN} MatDuplicateOption;$/;"	e	enum:__anon92
MAT_CUSPARSECopyToGPU	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_CUSPCopyToGPU, MAT_CUSPARSECopyToGPU, MAT_SetValuesBatch, MAT_SetValuesBatchI, MAT_SetValuesBatchII, MAT_SetValuesBatchIII, MAT_SetValuesBatchIV;$/;"	v
MAT_CUSPARSE_ALL	include/petscmat.h	/^typedef enum {MAT_CUSPARSE_MULT_DIAG, MAT_CUSPARSE_MULT_OFFDIAG, MAT_CUSPARSE_MULT, MAT_CUSPARSE_SOLVE, MAT_CUSPARSE_ALL} MatCUSPARSEFormatOperation;$/;"	e	enum:__anon104
MAT_CUSPARSE_CSR	include/petscmat.h	/^typedef enum {MAT_CUSPARSE_CSR, MAT_CUSPARSE_ELL, MAT_CUSPARSE_HYB} MatCUSPARSEStorageFormat;$/;"	e	enum:__anon103
MAT_CUSPARSE_ELL	include/petscmat.h	/^typedef enum {MAT_CUSPARSE_CSR, MAT_CUSPARSE_ELL, MAT_CUSPARSE_HYB} MatCUSPARSEStorageFormat;$/;"	e	enum:__anon103
MAT_CUSPARSE_HYB	include/petscmat.h	/^typedef enum {MAT_CUSPARSE_CSR, MAT_CUSPARSE_ELL, MAT_CUSPARSE_HYB} MatCUSPARSEStorageFormat;$/;"	e	enum:__anon103
MAT_CUSPARSE_MULT	include/petscmat.h	/^typedef enum {MAT_CUSPARSE_MULT_DIAG, MAT_CUSPARSE_MULT_OFFDIAG, MAT_CUSPARSE_MULT, MAT_CUSPARSE_SOLVE, MAT_CUSPARSE_ALL} MatCUSPARSEFormatOperation;$/;"	e	enum:__anon104
MAT_CUSPARSE_MULT_DIAG	include/petscmat.h	/^typedef enum {MAT_CUSPARSE_MULT_DIAG, MAT_CUSPARSE_MULT_OFFDIAG, MAT_CUSPARSE_MULT, MAT_CUSPARSE_SOLVE, MAT_CUSPARSE_ALL} MatCUSPARSEFormatOperation;$/;"	e	enum:__anon104
MAT_CUSPARSE_MULT_OFFDIAG	include/petscmat.h	/^typedef enum {MAT_CUSPARSE_MULT_DIAG, MAT_CUSPARSE_MULT_OFFDIAG, MAT_CUSPARSE_MULT, MAT_CUSPARSE_SOLVE, MAT_CUSPARSE_ALL} MatCUSPARSEFormatOperation;$/;"	e	enum:__anon104
MAT_CUSPARSE_SOLVE	include/petscmat.h	/^typedef enum {MAT_CUSPARSE_MULT_DIAG, MAT_CUSPARSE_MULT_OFFDIAG, MAT_CUSPARSE_MULT, MAT_CUSPARSE_SOLVE, MAT_CUSPARSE_ALL} MatCUSPARSEFormatOperation;$/;"	e	enum:__anon104
MAT_CUSPCopyToGPU	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_CUSPCopyToGPU, MAT_CUSPARSECopyToGPU, MAT_SetValuesBatch, MAT_SetValuesBatchI, MAT_SetValuesBatchII, MAT_SetValuesBatchIII, MAT_SetValuesBatchIV;$/;"	v
MAT_CUSP_ALL	include/petscmat.h	/^typedef enum {MAT_CUSP_MULT_DIAG, MAT_CUSP_MULT_OFFDIAG, MAT_CUSP_MULT, MAT_CUSP_SOLVE, MAT_CUSP_ALL} MatCUSPFormatOperation;$/;"	e	enum:__anon106
MAT_CUSP_CSR	include/petscmat.h	/^typedef enum {MAT_CUSP_CSR, MAT_CUSP_DIA, MAT_CUSP_ELL} MatCUSPStorageFormat;$/;"	e	enum:__anon105
MAT_CUSP_DIA	include/petscmat.h	/^typedef enum {MAT_CUSP_CSR, MAT_CUSP_DIA, MAT_CUSP_ELL} MatCUSPStorageFormat;$/;"	e	enum:__anon105
MAT_CUSP_ELL	include/petscmat.h	/^typedef enum {MAT_CUSP_CSR, MAT_CUSP_DIA, MAT_CUSP_ELL} MatCUSPStorageFormat;$/;"	e	enum:__anon105
MAT_CUSP_MULT	include/petscmat.h	/^typedef enum {MAT_CUSP_MULT_DIAG, MAT_CUSP_MULT_OFFDIAG, MAT_CUSP_MULT, MAT_CUSP_SOLVE, MAT_CUSP_ALL} MatCUSPFormatOperation;$/;"	e	enum:__anon106
MAT_CUSP_MULT_DIAG	include/petscmat.h	/^typedef enum {MAT_CUSP_MULT_DIAG, MAT_CUSP_MULT_OFFDIAG, MAT_CUSP_MULT, MAT_CUSP_SOLVE, MAT_CUSP_ALL} MatCUSPFormatOperation;$/;"	e	enum:__anon106
MAT_CUSP_MULT_OFFDIAG	include/petscmat.h	/^typedef enum {MAT_CUSP_MULT_DIAG, MAT_CUSP_MULT_OFFDIAG, MAT_CUSP_MULT, MAT_CUSP_SOLVE, MAT_CUSP_ALL} MatCUSPFormatOperation;$/;"	e	enum:__anon106
MAT_CUSP_SOLVE	include/petscmat.h	/^typedef enum {MAT_CUSP_MULT_DIAG, MAT_CUSP_MULT_OFFDIAG, MAT_CUSP_MULT, MAT_CUSP_SOLVE, MAT_CUSP_ALL} MatCUSPFormatOperation;$/;"	e	enum:__anon106
MAT_CholeskyFactor	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_LUFactorNumeric, MAT_CholeskyFactor, MAT_CholeskyFactorSymbolic, MAT_CholeskyFactorNumeric, MAT_ILUFactor;$/;"	v
MAT_CholeskyFactorNumeric	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_LUFactorNumeric, MAT_CholeskyFactor, MAT_CholeskyFactorSymbolic, MAT_CholeskyFactorNumeric, MAT_ILUFactor;$/;"	v
MAT_CholeskyFactorSymbolic	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_LUFactorNumeric, MAT_CholeskyFactor, MAT_CholeskyFactorSymbolic, MAT_CholeskyFactorNumeric, MAT_ILUFactor;$/;"	v
MAT_Coarsen	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_IncreaseOverlap, MAT_Partitioning, MAT_Coarsen, MAT_ZeroEntries, MAT_Load, MAT_View, MAT_AXPY, MAT_FDColoringCreate, MAT_TransposeColoringCreate;$/;"	v
MAT_Convert	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_ILUFactorSymbolic, MAT_ICCFactorSymbolic, MAT_Copy, MAT_Convert, MAT_Scale, MAT_AssemblyBegin;$/;"	v
MAT_Copy	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_ILUFactorSymbolic, MAT_ICCFactorSymbolic, MAT_Copy, MAT_Convert, MAT_Scale, MAT_AssemblyBegin;$/;"	v
MAT_DO_NOT_COPY_VALUES	include/petscmat.h	/^typedef enum {MAT_DO_NOT_COPY_VALUES,MAT_COPY_VALUES,MAT_SHARE_NONZERO_PATTERN} MatDuplicateOption;$/;"	e	enum:__anon92
MAT_DO_NOT_GET_VALUES	include/petscmat.h	/^typedef enum {MAT_DO_NOT_GET_VALUES,MAT_GET_VALUES} MatGetSubMatrixOption;$/;"	e	enum:__anon86
MAT_ERROR_LOWER_TRIANGULAR	include/petscmat.h	/^              MAT_ERROR_LOWER_TRIANGULAR = 13,$/;"	e	enum:__anon91
MAT_FACTOR_CHOLESKY	include/petscmat.h	/^typedef enum {MAT_FACTOR_NONE, MAT_FACTOR_LU, MAT_FACTOR_CHOLESKY, MAT_FACTOR_ILU, MAT_FACTOR_ICC,MAT_FACTOR_ILUDT} MatFactorType;$/;"	e	enum:__anon84
MAT_FACTOR_ICC	include/petscmat.h	/^typedef enum {MAT_FACTOR_NONE, MAT_FACTOR_LU, MAT_FACTOR_CHOLESKY, MAT_FACTOR_ILU, MAT_FACTOR_ICC,MAT_FACTOR_ILUDT} MatFactorType;$/;"	e	enum:__anon84
MAT_FACTOR_ILU	include/petscmat.h	/^typedef enum {MAT_FACTOR_NONE, MAT_FACTOR_LU, MAT_FACTOR_CHOLESKY, MAT_FACTOR_ILU, MAT_FACTOR_ICC,MAT_FACTOR_ILUDT} MatFactorType;$/;"	e	enum:__anon84
MAT_FACTOR_ILUDT	include/petscmat.h	/^typedef enum {MAT_FACTOR_NONE, MAT_FACTOR_LU, MAT_FACTOR_CHOLESKY, MAT_FACTOR_ILU, MAT_FACTOR_ICC,MAT_FACTOR_ILUDT} MatFactorType;$/;"	e	enum:__anon84
MAT_FACTOR_LU	include/petscmat.h	/^typedef enum {MAT_FACTOR_NONE, MAT_FACTOR_LU, MAT_FACTOR_CHOLESKY, MAT_FACTOR_ILU, MAT_FACTOR_ICC,MAT_FACTOR_ILUDT} MatFactorType;$/;"	e	enum:__anon84
MAT_FACTOR_NONE	include/petscmat.h	/^typedef enum {MAT_FACTOR_NONE, MAT_FACTOR_LU, MAT_FACTOR_CHOLESKY, MAT_FACTOR_ILU, MAT_FACTOR_ICC,MAT_FACTOR_ILUDT} MatFactorType;$/;"	e	enum:__anon84
MAT_FDCOLORING_CLASSID	include/petscmat.h	/^PETSC_EXTERN PetscClassId MAT_FDCOLORING_CLASSID;$/;"	v
MAT_FDColoringApply	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_FDColoringApply, MAT_Transpose, MAT_FDColoringFunction;$/;"	v
MAT_FDColoringCreate	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_IncreaseOverlap, MAT_Partitioning, MAT_Coarsen, MAT_ZeroEntries, MAT_Load, MAT_View, MAT_AXPY, MAT_FDColoringCreate, MAT_TransposeColoringCreate;$/;"	v
MAT_FDColoringFunction	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_FDColoringApply, MAT_Transpose, MAT_FDColoringFunction;$/;"	v
MAT_FILE_CLASSID	include/petscmat.h	134;"	d
MAT_FINAL_ASSEMBLY	include/petscmat.h	/^typedef enum {MAT_FLUSH_ASSEMBLY=1,MAT_FINAL_ASSEMBLY=0} MatAssemblyType;$/;"	e	enum:__anon90
MAT_FLUSH_ASSEMBLY	include/petscmat.h	/^typedef enum {MAT_FLUSH_ASSEMBLY=1,MAT_FINAL_ASSEMBLY=0} MatAssemblyType;$/;"	e	enum:__anon90
MAT_ForwardSolve	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_SolveTransposeAdd, MAT_SOR, MAT_ForwardSolve, MAT_BackwardSolve, MAT_LUFactor, MAT_LUFactorSymbolic;$/;"	v
MAT_GETROW_UPPERTRIANGULAR	include/petscmat.h	/^              MAT_GETROW_UPPERTRIANGULAR = 14,$/;"	e	enum:__anon91
MAT_GET_VALUES	include/petscmat.h	/^typedef enum {MAT_DO_NOT_GET_VALUES,MAT_GET_VALUES} MatGetSubMatrixOption;$/;"	e	enum:__anon86
MAT_GLOBAL_MAX	include/petscmat.h	/^typedef enum {MAT_LOCAL=1,MAT_GLOBAL_MAX=2,MAT_GLOBAL_SUM=3} MatInfoType;$/;"	e	enum:__anon94
MAT_GLOBAL_SUM	include/petscmat.h	/^typedef enum {MAT_LOCAL=1,MAT_GLOBAL_MAX=2,MAT_GLOBAL_SUM=3} MatInfoType;$/;"	e	enum:__anon94
MAT_GetBrowsOfAcols	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_MatMult, MAT_MatSolve,MAT_MatMultSymbolic, MAT_MatMultNumeric,MAT_Getlocalmatcondensed,MAT_GetBrowsOfAcols,MAT_GetBrowsOfAocols;$/;"	v
MAT_GetBrowsOfAocols	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_MatMult, MAT_MatSolve,MAT_MatMultSymbolic, MAT_MatMultNumeric,MAT_Getlocalmatcondensed,MAT_GetBrowsOfAcols,MAT_GetBrowsOfAocols;$/;"	v
MAT_GetColoring	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_AssemblyEnd, MAT_SetValues, MAT_GetValues, MAT_GetRow, MAT_GetRowIJ, MAT_GetSubMatrices, MAT_GetColoring, MAT_GetOrdering, MAT_GetRedundantMatrix;$/;"	v
MAT_GetMultiProcBlock	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_GetMultiProcBlock;$/;"	v
MAT_GetOrdering	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_AssemblyEnd, MAT_SetValues, MAT_GetValues, MAT_GetRow, MAT_GetRowIJ, MAT_GetSubMatrices, MAT_GetColoring, MAT_GetOrdering, MAT_GetRedundantMatrix;$/;"	v
MAT_GetRedundantMatrix	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_AssemblyEnd, MAT_SetValues, MAT_GetValues, MAT_GetRow, MAT_GetRowIJ, MAT_GetSubMatrices, MAT_GetColoring, MAT_GetOrdering, MAT_GetRedundantMatrix;$/;"	v
MAT_GetRow	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_AssemblyEnd, MAT_SetValues, MAT_GetValues, MAT_GetRow, MAT_GetRowIJ, MAT_GetSubMatrices, MAT_GetColoring, MAT_GetOrdering, MAT_GetRedundantMatrix;$/;"	v
MAT_GetRowIJ	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_AssemblyEnd, MAT_SetValues, MAT_GetValues, MAT_GetRow, MAT_GetRowIJ, MAT_GetSubMatrices, MAT_GetColoring, MAT_GetOrdering, MAT_GetRedundantMatrix;$/;"	v
MAT_GetSequentialNonzeroStructure	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_Getsymtranspose, MAT_Transpose_SeqAIJ, MAT_Getsymtransreduced,MAT_GetSequentialNonzeroStructure;$/;"	v
MAT_GetSubMatrices	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_AssemblyEnd, MAT_SetValues, MAT_GetValues, MAT_GetRow, MAT_GetRowIJ, MAT_GetSubMatrices, MAT_GetColoring, MAT_GetOrdering, MAT_GetRedundantMatrix;$/;"	v
MAT_GetValues	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_AssemblyEnd, MAT_SetValues, MAT_GetValues, MAT_GetRow, MAT_GetRowIJ, MAT_GetSubMatrices, MAT_GetColoring, MAT_GetOrdering, MAT_GetRedundantMatrix;$/;"	v
MAT_Getlocalmat	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_PtAP, MAT_PtAPSymbolic, MAT_PtAPNumeric,MAT_Seqstompinum,MAT_Seqstompisym,MAT_Seqstompi,MAT_Getlocalmat;$/;"	v
MAT_Getlocalmatcondensed	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_MatMult, MAT_MatSolve,MAT_MatMultSymbolic, MAT_MatMultNumeric,MAT_Getlocalmatcondensed,MAT_GetBrowsOfAcols,MAT_GetBrowsOfAocols;$/;"	v
MAT_Getsymtranspose	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_Getsymtranspose, MAT_Transpose_SeqAIJ, MAT_Getsymtransreduced,MAT_GetSequentialNonzeroStructure;$/;"	v
MAT_Getsymtransreduced	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_Getsymtranspose, MAT_Transpose_SeqAIJ, MAT_Getsymtransreduced,MAT_GetSequentialNonzeroStructure;$/;"	v
MAT_HERMITIAN	include/petscmat.h	/^              MAT_HERMITIAN = 9,$/;"	e	enum:__anon91
MAT_ICCFactorSymbolic	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_ILUFactorSymbolic, MAT_ICCFactorSymbolic, MAT_Copy, MAT_Convert, MAT_Scale, MAT_AssemblyBegin;$/;"	v
MAT_IGNORE_LOWER_TRIANGULAR	include/petscmat.h	/^              MAT_IGNORE_LOWER_TRIANGULAR = 12,$/;"	e	enum:__anon91
MAT_IGNORE_MATRIX	include/petscmat.h	/^typedef enum {MAT_INITIAL_MATRIX,MAT_REUSE_MATRIX,MAT_IGNORE_MATRIX} MatReuse;$/;"	e	enum:__anon85
MAT_IGNORE_OFF_PROC_ENTRIES	include/petscmat.h	/^              MAT_IGNORE_OFF_PROC_ENTRIES = 4,$/;"	e	enum:__anon91
MAT_IGNORE_ZERO_ENTRIES	include/petscmat.h	/^              MAT_IGNORE_ZERO_ENTRIES = 7,$/;"	e	enum:__anon91
MAT_ILUFactor	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_LUFactorNumeric, MAT_CholeskyFactor, MAT_CholeskyFactorSymbolic, MAT_CholeskyFactorNumeric, MAT_ILUFactor;$/;"	v
MAT_ILUFactorSymbolic	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_ILUFactorSymbolic, MAT_ICCFactorSymbolic, MAT_Copy, MAT_Convert, MAT_Scale, MAT_AssemblyBegin;$/;"	v
MAT_INITIAL_MATRIX	include/petscmat.h	/^typedef enum {MAT_INITIAL_MATRIX,MAT_REUSE_MATRIX,MAT_IGNORE_MATRIX} MatReuse;$/;"	e	enum:__anon85
MAT_IncreaseOverlap	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_IncreaseOverlap, MAT_Partitioning, MAT_Coarsen, MAT_ZeroEntries, MAT_Load, MAT_View, MAT_AXPY, MAT_FDColoringCreate, MAT_TransposeColoringCreate;$/;"	v
MAT_KEEP_NONZERO_PATTERN	include/petscmat.h	/^              MAT_KEEP_NONZERO_PATTERN = 6,$/;"	e	enum:__anon91
MAT_LOCAL	include/petscmat.h	/^typedef enum {MAT_LOCAL=1,MAT_GLOBAL_MAX=2,MAT_GLOBAL_SUM=3} MatInfoType;$/;"	e	enum:__anon94
MAT_LUFactor	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_SolveTransposeAdd, MAT_SOR, MAT_ForwardSolve, MAT_BackwardSolve, MAT_LUFactor, MAT_LUFactorSymbolic;$/;"	v
MAT_LUFactorNumeric	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_LUFactorNumeric, MAT_CholeskyFactor, MAT_CholeskyFactorSymbolic, MAT_CholeskyFactorNumeric, MAT_ILUFactor;$/;"	v
MAT_LUFactorSymbolic	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_SolveTransposeAdd, MAT_SOR, MAT_ForwardSolve, MAT_BackwardSolve, MAT_LUFactor, MAT_LUFactorSymbolic;$/;"	v
MAT_Load	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_IncreaseOverlap, MAT_Partitioning, MAT_Coarsen, MAT_ZeroEntries, MAT_Load, MAT_View, MAT_AXPY, MAT_FDColoringCreate, MAT_TransposeColoringCreate;$/;"	v
MAT_MatMatMult	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_MatMatMult, MAT_MatMatMultSymbolic, MAT_MatMatMultNumeric;$/;"	v
MAT_MatMatMultNumeric	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_MatMatMult, MAT_MatMatMultSymbolic, MAT_MatMatMultNumeric;$/;"	v
MAT_MatMatMultSymbolic	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_MatMatMult, MAT_MatMatMultSymbolic, MAT_MatMatMultNumeric;$/;"	v
MAT_MatMult	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_MatMult, MAT_MatSolve,MAT_MatMultSymbolic, MAT_MatMultNumeric,MAT_Getlocalmatcondensed,MAT_GetBrowsOfAcols,MAT_GetBrowsOfAocols;$/;"	v
MAT_MatMultNumeric	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_MatMult, MAT_MatSolve,MAT_MatMultSymbolic, MAT_MatMultNumeric,MAT_Getlocalmatcondensed,MAT_GetBrowsOfAcols,MAT_GetBrowsOfAocols;$/;"	v
MAT_MatMultSymbolic	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_MatMult, MAT_MatSolve,MAT_MatMultSymbolic, MAT_MatMultNumeric,MAT_Getlocalmatcondensed,MAT_GetBrowsOfAcols,MAT_GetBrowsOfAocols;$/;"	v
MAT_MatSolve	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_MatMult, MAT_MatSolve,MAT_MatMultSymbolic, MAT_MatMultNumeric,MAT_Getlocalmatcondensed,MAT_GetBrowsOfAcols,MAT_GetBrowsOfAocols;$/;"	v
MAT_MatTransposeMult	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_MatTransposeMult, MAT_MatTransposeMultSymbolic, MAT_MatTransposeMultNumeric;$/;"	v
MAT_MatTransposeMultNumeric	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_MatTransposeMult, MAT_MatTransposeMultSymbolic, MAT_MatTransposeMultNumeric;$/;"	v
MAT_MatTransposeMultSymbolic	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_MatTransposeMult, MAT_MatTransposeMultSymbolic, MAT_MatTransposeMultNumeric;$/;"	v
MAT_Merge	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_Merge;$/;"	v
MAT_Mult	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_Mult, MAT_MultMatrixFree, MAT_Mults, MAT_MultConstrained, MAT_MultAdd, MAT_MultTranspose;$/;"	v
MAT_MultAdd	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_Mult, MAT_MultMatrixFree, MAT_Mults, MAT_MultConstrained, MAT_MultAdd, MAT_MultTranspose;$/;"	v
MAT_MultConstrained	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_Mult, MAT_MultMatrixFree, MAT_Mults, MAT_MultConstrained, MAT_MultAdd, MAT_MultTranspose;$/;"	v
MAT_MultMatrixFree	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_Mult, MAT_MultMatrixFree, MAT_Mults, MAT_MultConstrained, MAT_MultAdd, MAT_MultTranspose;$/;"	v
MAT_MultTranspose	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_Mult, MAT_MultMatrixFree, MAT_Mults, MAT_MultConstrained, MAT_MultAdd, MAT_MultTranspose;$/;"	v
MAT_MultTransposeAdd	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_MultTransposeConstrained, MAT_MultTransposeAdd, MAT_Solve, MAT_Solves, MAT_SolveAdd, MAT_SolveTranspose;$/;"	v
MAT_MultTransposeConstrained	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_MultTransposeConstrained, MAT_MultTransposeAdd, MAT_Solve, MAT_Solves, MAT_SolveAdd, MAT_SolveTranspose;$/;"	v
MAT_Mults	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_Mult, MAT_MultMatrixFree, MAT_Mults, MAT_MultConstrained, MAT_MultAdd, MAT_MultTranspose;$/;"	v
MAT_NEW_DIAGONALS	include/petscmat.h	/^              MAT_NEW_DIAGONALS = 3,$/;"	e	enum:__anon91
MAT_NEW_NONZERO_ALLOCATION_ERR	include/petscmat.h	/^              MAT_NEW_NONZERO_ALLOCATION_ERR = -3,$/;"	e	enum:__anon91
MAT_NEW_NONZERO_LOCATIONS	include/petscmat.h	/^              MAT_NEW_NONZERO_LOCATIONS = -1,$/;"	e	enum:__anon91
MAT_NEW_NONZERO_LOCATION_ERR	include/petscmat.h	/^              MAT_NEW_NONZERO_LOCATION_ERR = -7,$/;"	e	enum:__anon91
MAT_NO_OFF_PROC_ENTRIES	include/petscmat.h	/^              MAT_NO_OFF_PROC_ENTRIES = -5,$/;"	e	enum:__anon91
MAT_NO_OFF_PROC_ZERO_ROWS	include/petscmat.h	/^              MAT_NO_OFF_PROC_ZERO_ROWS = -6,$/;"	e	enum:__anon91
MAT_NULLSPACE_CLASSID	include/petscmat.h	/^PETSC_EXTERN PetscClassId MAT_NULLSPACE_CLASSID;$/;"	v
MAT_OPTION_MAX	include/petscmat.h	/^              MAT_OPTION_MAX = 16} MatOption;$/;"	e	enum:__anon91
MAT_OPTION_MIN	include/petscmat.h	/^typedef enum {MAT_OPTION_MIN = -8,$/;"	e	enum:__anon91
MAT_PARTITIONING_CLASSID	include/petscmat.h	/^PETSC_EXTERN PetscClassId MAT_PARTITIONING_CLASSID;$/;"	v
MAT_Partitioning	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_IncreaseOverlap, MAT_Partitioning, MAT_Coarsen, MAT_ZeroEntries, MAT_Load, MAT_View, MAT_AXPY, MAT_FDColoringCreate, MAT_TransposeColoringCreate;$/;"	v
MAT_PtAP	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_PtAP, MAT_PtAPSymbolic, MAT_PtAPNumeric,MAT_Seqstompinum,MAT_Seqstompisym,MAT_Seqstompi,MAT_Getlocalmat;$/;"	v
MAT_PtAPNumeric	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_PtAP, MAT_PtAPSymbolic, MAT_PtAPNumeric,MAT_Seqstompinum,MAT_Seqstompisym,MAT_Seqstompi,MAT_Getlocalmat;$/;"	v
MAT_PtAPSymbolic	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_PtAP, MAT_PtAPSymbolic, MAT_PtAPNumeric,MAT_Seqstompinum,MAT_Seqstompisym,MAT_Seqstompi,MAT_Getlocalmat;$/;"	v
MAT_RARt	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_RARt, MAT_RARtSymbolic, MAT_RARtNumeric;$/;"	v
MAT_RARtNumeric	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_RARt, MAT_RARtSymbolic, MAT_RARtNumeric;$/;"	v
MAT_RARtSymbolic	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_RARt, MAT_RARtSymbolic, MAT_RARtNumeric;$/;"	v
MAT_REUSE_MATRIX	include/petscmat.h	/^typedef enum {MAT_INITIAL_MATRIX,MAT_REUSE_MATRIX,MAT_IGNORE_MATRIX} MatReuse;$/;"	e	enum:__anon85
MAT_ROW_ORIENTED	include/petscmat.h	/^              MAT_ROW_ORIENTED = -2,$/;"	e	enum:__anon91
MAT_SHARE_NONZERO_PATTERN	include/petscmat.h	/^typedef enum {MAT_DO_NOT_COPY_VALUES,MAT_COPY_VALUES,MAT_SHARE_NONZERO_PATTERN} MatDuplicateOption;$/;"	e	enum:__anon92
MAT_SHIFT_INBLOCKS	include/petscmat.h	/^typedef enum {MAT_SHIFT_NONE,MAT_SHIFT_NONZERO,MAT_SHIFT_POSITIVE_DEFINITE,MAT_SHIFT_INBLOCKS} MatFactorShiftType;$/;"	e	enum:__anon95
MAT_SHIFT_NONE	include/petscmat.h	/^typedef enum {MAT_SHIFT_NONE,MAT_SHIFT_NONZERO,MAT_SHIFT_POSITIVE_DEFINITE,MAT_SHIFT_INBLOCKS} MatFactorShiftType;$/;"	e	enum:__anon95
MAT_SHIFT_NONZERO	include/petscmat.h	/^typedef enum {MAT_SHIFT_NONE,MAT_SHIFT_NONZERO,MAT_SHIFT_POSITIVE_DEFINITE,MAT_SHIFT_INBLOCKS} MatFactorShiftType;$/;"	e	enum:__anon95
MAT_SHIFT_POSITIVE_DEFINITE	include/petscmat.h	/^typedef enum {MAT_SHIFT_NONE,MAT_SHIFT_NONZERO,MAT_SHIFT_POSITIVE_DEFINITE,MAT_SHIFT_INBLOCKS} MatFactorShiftType;$/;"	e	enum:__anon95
MAT_SKIP_ALLOCATION	include/petscmat.h	873;"	d
MAT_SOR	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_SolveTransposeAdd, MAT_SOR, MAT_ForwardSolve, MAT_BackwardSolve, MAT_LUFactor, MAT_LUFactorSymbolic;$/;"	v
MAT_SPD	include/petscmat.h	/^              MAT_SPD = 15,$/;"	e	enum:__anon91
MAT_STRUCTURALLY_SYMMETRIC	include/petscmat.h	/^              MAT_STRUCTURALLY_SYMMETRIC = 2,$/;"	e	enum:__anon91
MAT_SYMMETRIC	include/petscmat.h	/^              MAT_SYMMETRIC = 1,$/;"	e	enum:__anon91
MAT_SYMMETRY_ETERNAL	include/petscmat.h	/^              MAT_SYMMETRY_ETERNAL = 10,$/;"	e	enum:__anon91
MAT_Scale	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_ILUFactorSymbolic, MAT_ICCFactorSymbolic, MAT_Copy, MAT_Convert, MAT_Scale, MAT_AssemblyBegin;$/;"	v
MAT_Seqstompi	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_PtAP, MAT_PtAPSymbolic, MAT_PtAPNumeric,MAT_Seqstompinum,MAT_Seqstompisym,MAT_Seqstompi,MAT_Getlocalmat;$/;"	v
MAT_Seqstompinum	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_PtAP, MAT_PtAPSymbolic, MAT_PtAPNumeric,MAT_Seqstompinum,MAT_Seqstompisym,MAT_Seqstompi,MAT_Getlocalmat;$/;"	v
MAT_Seqstompisym	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_PtAP, MAT_PtAPSymbolic, MAT_PtAPNumeric,MAT_Seqstompinum,MAT_Seqstompisym,MAT_Seqstompi,MAT_Getlocalmat;$/;"	v
MAT_SetValues	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_AssemblyEnd, MAT_SetValues, MAT_GetValues, MAT_GetRow, MAT_GetRowIJ, MAT_GetSubMatrices, MAT_GetColoring, MAT_GetOrdering, MAT_GetRedundantMatrix;$/;"	v
MAT_SetValuesBatch	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_CUSPCopyToGPU, MAT_CUSPARSECopyToGPU, MAT_SetValuesBatch, MAT_SetValuesBatchI, MAT_SetValuesBatchII, MAT_SetValuesBatchIII, MAT_SetValuesBatchIV;$/;"	v
MAT_SetValuesBatchI	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_CUSPCopyToGPU, MAT_CUSPARSECopyToGPU, MAT_SetValuesBatch, MAT_SetValuesBatchI, MAT_SetValuesBatchII, MAT_SetValuesBatchIII, MAT_SetValuesBatchIV;$/;"	v
MAT_SetValuesBatchII	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_CUSPCopyToGPU, MAT_CUSPARSECopyToGPU, MAT_SetValuesBatch, MAT_SetValuesBatchI, MAT_SetValuesBatchII, MAT_SetValuesBatchIII, MAT_SetValuesBatchIV;$/;"	v
MAT_SetValuesBatchIII	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_CUSPCopyToGPU, MAT_CUSPARSECopyToGPU, MAT_SetValuesBatch, MAT_SetValuesBatchI, MAT_SetValuesBatchII, MAT_SetValuesBatchIII, MAT_SetValuesBatchIV;$/;"	v
MAT_SetValuesBatchIV	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_CUSPCopyToGPU, MAT_CUSPARSECopyToGPU, MAT_SetValuesBatch, MAT_SetValuesBatchI, MAT_SetValuesBatchII, MAT_SetValuesBatchIII, MAT_SetValuesBatchIV;$/;"	v
MAT_Solve	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_MultTransposeConstrained, MAT_MultTransposeAdd, MAT_Solve, MAT_Solves, MAT_SolveAdd, MAT_SolveTranspose;$/;"	v
MAT_SolveAdd	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_MultTransposeConstrained, MAT_MultTransposeAdd, MAT_Solve, MAT_Solves, MAT_SolveAdd, MAT_SolveTranspose;$/;"	v
MAT_SolveTranspose	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_MultTransposeConstrained, MAT_MultTransposeAdd, MAT_Solve, MAT_Solves, MAT_SolveAdd, MAT_SolveTranspose;$/;"	v
MAT_SolveTransposeAdd	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_SolveTransposeAdd, MAT_SOR, MAT_ForwardSolve, MAT_BackwardSolve, MAT_LUFactor, MAT_LUFactorSymbolic;$/;"	v
MAT_Solves	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_MultTransposeConstrained, MAT_MultTransposeAdd, MAT_Solve, MAT_Solves, MAT_SolveAdd, MAT_SolveTranspose;$/;"	v
MAT_TRANSPOSECOLORING_CLASSID	include/petscmat.h	/^PETSC_EXTERN PetscClassId MAT_TRANSPOSECOLORING_CLASSID;$/;"	v
MAT_Transpose	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_FDColoringApply, MAT_Transpose, MAT_FDColoringFunction;$/;"	v
MAT_TransposeColoringCreate	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_IncreaseOverlap, MAT_Partitioning, MAT_Coarsen, MAT_ZeroEntries, MAT_Load, MAT_View, MAT_AXPY, MAT_FDColoringCreate, MAT_TransposeColoringCreate;$/;"	v
MAT_TransposeMatMult	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_TransposeMatMult, MAT_TransposeMatMultSymbolic, MAT_TransposeMatMultNumeric;$/;"	v
MAT_TransposeMatMultNumeric	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_TransposeMatMult, MAT_TransposeMatMultSymbolic, MAT_TransposeMatMultNumeric;$/;"	v
MAT_TransposeMatMultSymbolic	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_TransposeMatMult, MAT_TransposeMatMultSymbolic, MAT_TransposeMatMultNumeric;$/;"	v
MAT_Transpose_SeqAIJ	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_Getsymtranspose, MAT_Transpose_SeqAIJ, MAT_Getsymtransreduced,MAT_GetSequentialNonzeroStructure;$/;"	v
MAT_UNUSED_NONZERO_LOCATION_ERR	include/petscmat.h	/^              MAT_UNUSED_NONZERO_LOCATION_ERR = -4,$/;"	e	enum:__anon91
MAT_USE_HASH_TABLE	include/petscmat.h	/^              MAT_USE_HASH_TABLE = 5,$/;"	e	enum:__anon91
MAT_USE_INODES	include/petscmat.h	/^              MAT_USE_INODES = 8,$/;"	e	enum:__anon91
MAT_View	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_IncreaseOverlap, MAT_Partitioning, MAT_Coarsen, MAT_ZeroEntries, MAT_Load, MAT_View, MAT_AXPY, MAT_FDColoringCreate, MAT_TransposeColoringCreate;$/;"	v
MAT_ZeroEntries	include/petsc-private/matimpl.h	/^PETSC_EXTERN PetscLogEvent MAT_IncreaseOverlap, MAT_Partitioning, MAT_Coarsen, MAT_ZeroEntries, MAT_Load, MAT_View, MAT_AXPY, MAT_FDColoringCreate, MAT_TransposeColoringCreate;$/;"	v
MAXKSPMONITORS	include/petsc-private/kspimpl.h	34;"	d
MAXSNESMONITORS	include/petsc-private/snesimpl.h	33;"	d
MAXTSMONITORS	include/petsc-private/tsimpl.h	19;"	d
MAX_COMPONENTS	include/petsc-private/characteristicimpl.h	14;"	d
MAX_VALUES	include/petscsys.h	/^ typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES, INSERT_BC_VALUES, ADD_BC_VALUES} InsertMode;$/;"	e	enum:__anon31
MBERR	include/petscdmmoab.h	14;"	d
MBERRNM	include/petscdmmoab.h	15;"	d
MISTAKES	config/cmakegen.py	/^MISTAKES = []$/;"	v
MONOSPACE_FONT_FAMILY	bin/TOPSInstaller.py	/^MONOSPACE_FONT_FAMILY = ("Courier")$/;"	v
MPChacoEigenType	include/finclude/petscmatdef.h	24;"	d
MPChacoEigenType	include/petscmat.h	/^typedef enum { MP_CHACO_LANCZOS=0,MP_CHACO_RQI=1 } MPChacoEigenType;$/;"	t	typeref:enum:__anon100
MPChacoEigenTypes	include/petscmat.h	/^PETSC_EXTERN const char *const MPChacoEigenTypes[];$/;"	v
MPChacoGlobalType	include/finclude/petscmatdef.h	22;"	d
MPChacoGlobalType	include/petscmat.h	/^typedef enum { MP_CHACO_MULTILEVEL=1,MP_CHACO_SPECTRAL=2,MP_CHACO_LINEAR=4,MP_CHACO_RANDOM=5,MP_CHACO_SCATTERED=6 } MPChacoGlobalType;$/;"	t	typeref:enum:__anon98
MPChacoGlobalTypes	include/petscmat.h	/^PETSC_EXTERN const char *const MPChacoGlobalTypes[];$/;"	v
MPChacoLocalType	include/finclude/petscmatdef.h	23;"	d
MPChacoLocalType	include/petscmat.h	/^typedef enum { MP_CHACO_KERNIGHAN=1,MP_CHACO_NONE=2 } MPChacoLocalType;$/;"	t	typeref:enum:__anon99
MPChacoLocalTypes	include/petscmat.h	/^PETSC_EXTERN const char *const MPChacoLocalTypes[];$/;"	v
MPIAPI	include/petscsys.h	103;"	d
MPIB	config/BuildSystem/regression/testCase.py	/^      import MPIB.Base$/;"	i
MPICH_SKIP_MPICXX	include/petscsys.h	88;"	d
MPIERROR	src/dm/impls/mesh/ALE.cxx	/^  void MPIERROR(PetscErrorCode ierr, const char *func, int line, const char *msg) {$/;"	f	namespace:ALE
MPIMover	include/sieve/BasicCommunication.hh	/^    MPIMover(MPI_Comm comm, const MPI_Datatype datatype, const int tag, const int debug) : ParallelObject(comm, debug), _createdType(0) {$/;"	f	class:ALE::MPIMover
MPIMover	include/sieve/BasicCommunication.hh	/^    MPIMover(MPI_Comm comm, const int debug = 0) : ParallelObject(comm, debug), _createdType(0) {$/;"	f	class:ALE::MPIMover
MPIMover	include/sieve/BasicCommunication.hh	/^    MPIMover(MPI_Comm comm, const int tag, const int debug) : ParallelObject(comm, debug), _createdType(0), _tag(tag) {$/;"	f	class:ALE::MPIMover
MPIMover	include/sieve/BasicCommunication.hh	/^  class MPIMover : public ParallelObject {$/;"	c	namespace:ALE
MPITest	config/BuildSystem/regression/testCase.py	/^class MPITest (unittest.TestCase):$/;"	c
MPIUNI_INTPTR	include/mpiuni/mpi.h	112;"	d
MPIU_2INT	include/petscmath.h	432;"	d
MPIU_COMPLEX	include/petscmath.h	174;"	d
MPIU_COMPLEX	include/petscmath.h	176;"	d
MPIU_COMPLEX	include/petscmath.h	178;"	d
MPIU_C_COMPLEX	include/petscmath.h	155;"	d
MPIU_C_DOUBLE_COMPLEX	include/petscmath.h	154;"	d
MPIU_File_read_all	include/petscsys.h	1915;"	d
MPIU_File_write_all	include/petscsys.h	1914;"	d
MPIU_INT	include/petscsys.h	187;"	d
MPIU_MATSCALAR	include/petscmath.h	422;"	d
MPIU_MAX	include/petscsys.h	/^PETSC_EXTERN MPI_Op MPIU_MAX;$/;"	v
MPIU_MAX	include/petscsys.h	1189;"	d
MPIU_MIN	include/petscsys.h	/^PETSC_EXTERN MPI_Op MPIU_MIN;$/;"	v
MPIU_MIN	include/petscsys.h	1190;"	d
MPIU_PETSCLOGDOUBLE	include/petscsys.h	1070;"	d
MPIU_REAL	include/petscmath.h	26;"	d
MPIU_REAL	include/petscmath.h	35;"	d
MPIU_REAL	include/petscmath.h	52;"	d
MPIU_REPLACE	include/petscsf.h	128;"	d
MPIU_REPLACE	include/petscsf.h	134;"	d
MPIU_SCALAR	include/petscmath.h	195;"	d
MPIU_SCALAR	include/petscmath.h	202;"	d
MPIU_SIZE_T	include/petscsys.h	242;"	d
MPIU_SIZE_T	include/petscsys.h	244;"	d
MPIU_SIZE_T	include/petscsys.h	246;"	d
MPIU_SUM	include/petscsys.h	/^PETSC_EXTERN MPI_Op MPIU_SUM;$/;"	v
MPIU_SUM	include/petscsys.h	1183;"	d
MPI_2INT	include/mpiuni/mpi.h	179;"	d
MPI_ANY_SOURCE	include/mpiuni/mpi.h	130;"	d
MPI_ANY_TAG	include/mpiuni/mpi.h	204;"	d
MPI_Abort	include/mpiuni/mpi.h	228;"	d
MPI_Address	include/mpiuni/mpi.h	528;"	d
MPI_Aint	include/mpiuni/mpi.h	266;"	d
MPI_Allgather	include/mpiuni/mpi.h	598;"	d
MPI_Allgather	include/petsclog.h	372;"	d
MPI_Allgatherv	include/mpiuni/mpi.h	605;"	d
MPI_Allgatherv	include/petsclog.h	375;"	d
MPI_Allreduce	include/mpiuni/mpi.h	630;"	d
MPI_Allreduce	include/petsclog.h	363;"	d
MPI_Alltoall	include/mpiuni/mpi.h	613;"	d
MPI_Alltoall	include/petsclog.h	366;"	d
MPI_Alltoallv	include/mpiuni/mpi.h	620;"	d
MPI_Alltoallv	include/petsclog.h	369;"	d
MPI_Alltoallw	include/mpiuni/mpi.h	623;"	d
MPI_Attr_delete	include/mpiuni/mpi.h	232;"	d
MPI_Attr_get	include/mpiuni/mpi.h	229;"	d
MPI_Attr_put	include/mpiuni/mpi.h	231;"	d
MPI_BOTTOM	include/mpiuni/mpi.h	193;"	d
MPI_BYTE	include/mpiuni/mpi.h	162;"	d
MPI_Barrier	include/mpiuni/mpi.h	549;"	d
MPI_Bcast	include/mpiuni/mpi.h	552;"	d
MPI_Bsend	include/mpiuni/mpi.h	297;"	d
MPI_Bsend_init	include/mpiuni/mpi.h	443;"	d
MPI_Bsend_init	include/mpiuni/mpi.h	461;"	d
MPI_Buffer_attach	include/mpiuni/mpi.h	321;"	d
MPI_Buffer_detach	include/mpiuni/mpi.h	325;"	d
MPI_CHAR	include/mpiuni/mpi.h	161;"	d
MPI_COMM_NULL	include/mpiuni/mpi.h	124;"	d
MPI_COMM_SELF	include/mpiuni/mpi.h	122;"	d
MPI_COMM_WORLD	include/mpiuni/mpi.h	123;"	d
MPI_COMPLEX	include/mpiuni/mpi.h	172;"	d
MPI_COMPLEX	include/mpiuni/mpif.h	/^       integer MPI_COMPLEX, MPI_CHARACTER$/;"	v
MPI_CONGRUENT	include/mpiuni/mpi.h	127;"	d
MPI_C_COMPLEX	include/mpiuni/mpi.h	173;"	d
MPI_C_DOUBLE_COMPLEX	include/mpiuni/mpi.h	174;"	d
MPI_Cancel	include/mpiuni/mpi.h	432;"	d
MPI_Cart_coords	include/mpiuni/mpi.h	685;"	d
MPI_Cart_create	include/mpiuni/mpi.h	675;"	d
MPI_Cart_get	include/mpiuni/mpi.h	682;"	d
MPI_Cart_map	include/mpiuni/mpi.h	694;"	d
MPI_Cart_rank	include/mpiuni/mpi.h	684;"	d
MPI_Cart_shift	include/mpiuni/mpi.h	691;"	d
MPI_Cart_sub	include/mpiuni/mpi.h	693;"	d
MPI_Cartdim_get	include/mpiuni/mpi.h	681;"	d
MPI_Comm	bin/matlab/classes/matlabheader.h	/^typedef int MPI_Comm;$/;"	t
MPI_Comm	include/finclude/petscsysdef.h	61;"	d
MPI_Comm	include/mpiuni/mpi.h	/^typedef int    MPI_Comm;$/;"	t
MPI_Comm_c2f	include/mpiuni/mpi.h	273;"	d
MPI_Comm_compare	include/mpiuni/mpi.h	658;"	d
MPI_Comm_create	include/mpiuni/mpi.h	236;"	d
MPI_Comm_create_keyval	include/mpiuni/mpi.h	245;"	d
MPI_Comm_dup	include/mpiuni/mpi.h	235;"	d
MPI_Comm_f2c	include/mpiuni/mpi.h	272;"	d
MPI_Comm_free	include/mpiuni/mpi.h	234;"	d
MPI_Comm_free_keyval	include/mpiuni/mpi.h	246;"	d
MPI_Comm_get_attr	include/mpiuni/mpi.h	247;"	d
MPI_Comm_group	include/mpiuni/mpi.h	418;"	d
MPI_Comm_rank	include/mpiuni/mpi.h	242;"	d
MPI_Comm_remote_group	include/mpiuni/mpi.h	669;"	d
MPI_Comm_remote_size	include/mpiuni/mpi.h	668;"	d
MPI_Comm_set_attr	include/mpiuni/mpi.h	248;"	d
MPI_Comm_size	include/mpiuni/mpi.h	241;"	d
MPI_Comm_split	include/mpiuni/mpi.h	663;"	d
MPI_Comm_test_inter	include/mpiuni/mpi.h	667;"	d
MPI_Copy_function	include/mpiuni/mpi.h	/^typedef int   (MPI_Copy_function)(MPI_Comm,int,void *,void *,void *,int *);$/;"	t
MPI_DATATYPE_NULL	include/mpiuni/mpi.h	205;"	d
MPI_DOUBLE	include/mpiuni/mpi.h	159;"	d
MPI_DOUBLE_INT	include/mpiuni/mpi.h	176;"	d
MPI_Datatype	include/mpiuni/mpi.h	157;"	d
MPI_Delete_function	include/mpiuni/mpi.h	/^typedef int   (MPI_Delete_function)(MPI_Comm,int,void *,void *);$/;"	t
MPI_Dims_create	include/mpiuni/mpi.h	677;"	d
MPI_ERROR	include/mpiuni/mpi.h	/^typedef struct {int MPI_TAG,MPI_SOURCE,MPI_ERROR;} MPI_Status;$/;"	m	struct:__anon1
MPI_ERRORS_ARE_FATAL	include/mpiuni/mpi.h	138;"	d
MPI_ERRORS_RETURN	include/mpiuni/mpi.h	136;"	d
MPI_ERR_INTERN	include/mpiuni/mpi.h	133;"	d
MPI_ERR_OTHER	include/mpiuni/mpi.h	134;"	d
MPI_ERR_UNKNOWN	include/mpiuni/mpi.h	132;"	d
MPI_Errhandler	include/mpiuni/mpi.h	/^typedef char   *MPI_Errhandler;$/;"	t
MPI_Errhandler_create	include/mpiuni/mpi.h	698;"	d
MPI_Errhandler_free	include/mpiuni/mpi.h	704;"	d
MPI_Errhandler_get	include/mpiuni/mpi.h	703;"	d
MPI_Errhandler_set	include/mpiuni/mpi.h	699;"	d
MPI_Error_class	include/mpiuni/mpi.h	706;"	d
MPI_Error_string	include/mpiuni/mpi.h	705;"	d
MPI_Exscan	include/mpiuni/mpi.h	636;"	d
MPI_FLOAT	include/mpiuni/mpi.h	158;"	d
MPI_FLOAT_INT	include/mpiuni/mpi.h	175;"	d
MPI_File	include/mpiuni/mpi.h	/^typedef int    MPI_File;$/;"	t
MPI_File_close	include/mpiuni/mpi.h	724;"	d
MPI_File_open	include/mpiuni/mpi.h	716;"	d
MPI_File_read_all	include/mpiuni/mpi.h	749;"	d
MPI_File_set_view	include/mpiuni/mpi.h	728;"	d
MPI_File_write_all	include/mpiuni/mpi.h	741;"	d
MPI_Finalize	include/mpiuni/mpi.h	238;"	d
MPI_Finalized	include/mpiuni/mpi.h	240;"	d
MPI_Fint	include/mpiuni/mpi.h	/^typedef int    MPI_Fint;$/;"	t
MPI_GROUP_NULL	include/mpiuni/mpi.h	191;"	d
MPI_Gather	include/mpiuni/mpi.h	558;"	d
MPI_Gather	include/petsclog.h	378;"	d
MPI_Gatherv	include/mpiuni/mpi.h	567;"	d
MPI_Gatherv	include/petsclog.h	381;"	d
MPI_Get_count	include/mpiuni/mpi.h	292;"	d
MPI_Get_elements	include/mpiuni/mpi.h	539;"	d
MPI_Get_processor_name	include/mpiuni/mpi.h	696;"	d
MPI_Graph_create	include/mpiuni/mpi.h	678;"	d
MPI_Graph_get	include/mpiuni/mpi.h	680;"	d
MPI_Graph_map	include/mpiuni/mpi.h	695;"	d
MPI_Graph_neighbors	include/mpiuni/mpi.h	689;"	d
MPI_Graph_neighbors_count	include/mpiuni/mpi.h	687;"	d
MPI_Graphdims_Get	include/mpiuni/mpi.h	679;"	d
MPI_Group	include/finclude/petscsysdef.h	62;"	d
MPI_Group	include/mpiuni/mpi.h	/^typedef void   *MPI_Group;$/;"	t
MPI_Group_compare	include/mpiuni/mpi.h	647;"	d
MPI_Group_difference	include/mpiuni/mpi.h	651;"	d
MPI_Group_excl	include/mpiuni/mpi.h	652;"	d
MPI_Group_free	include/mpiuni/mpi.h	655;"	d
MPI_Group_incl	include/mpiuni/mpi.h	422;"	d
MPI_Group_intersection	include/mpiuni/mpi.h	650;"	d
MPI_Group_range_excl	include/mpiuni/mpi.h	654;"	d
MPI_Group_range_incl	include/mpiuni/mpi.h	653;"	d
MPI_Group_rank	include/mpiuni/mpi.h	641;"	d
MPI_Group_size	include/mpiuni/mpi.h	640;"	d
MPI_Group_translate_ranks	include/mpiuni/mpi.h	642;"	d
MPI_Group_union	include/mpiuni/mpi.h	649;"	d
MPI_IDENT	include/mpiuni/mpi.h	126;"	d
MPI_INFO_NULL	include/mpiuni/mpi.h	192;"	d
MPI_INT	include/mpiuni/mpi.h	163;"	d
MPI_IN_PLACE	include/mpiuni/mpi.h	211;"	d
MPI_Ibsend	include/mpiuni/mpi.h	329;"	d
MPI_Info	include/mpiuni/mpi.h	/^typedef int    MPI_Info;$/;"	t
MPI_Init	include/mpiuni/mpi.h	237;"	d
MPI_Initialized	include/mpiuni/mpi.h	239;"	d
MPI_Intercomm_create	include/mpiuni/mpi.h	670;"	d
MPI_Intercomm_merge	include/mpiuni/mpi.h	672;"	d
MPI_Iprobe	include/mpiuni/mpi.h	430;"	d
MPI_Irecv	include/mpiuni/mpi.h	356;"	d
MPI_Irecv	include/petsclog.h	333;"	d
MPI_Irsend	include/mpiuni/mpi.h	347;"	d
MPI_Isend	include/mpiuni/mpi.h	365;"	d
MPI_Isend	include/petsclog.h	336;"	d
MPI_Issend	include/mpiuni/mpi.h	338;"	d
MPI_KEYVAL_INVALID	include/mpiuni/mpi.h	131;"	d
MPI_Keyval_create	include/mpiuni/mpi.h	233;"	d
MPI_Keyval_free	include/mpiuni/mpi.h	230;"	d
MPI_LONG	include/mpiuni/mpi.h	164;"	d
MPI_LONG_DOUBLE	include/mpiuni/mpi.h	160;"	d
MPI_LONG_INT	include/mpiuni/mpi.h	177;"	d
MPI_LONG_LONG_INT	include/mpiuni/mpi.h	165;"	d
MPI_MAX	include/mpiuni/mpi.h	201;"	d
MPI_MAXLOC	include/mpiuni/mpi.h	139;"	d
MPI_MAXLOC	include/mpiuni/mpif.h	/^       integer MPI_MAXLOC,MPI_MINLOC$/;"	v
MPI_MAX_ERROR_STRING	include/mpiuni/mpi.h	207;"	d
MPI_MIN	include/mpiuni/mpi.h	202;"	d
MPI_MINLOC	include/mpiuni/mpi.h	140;"	d
MPI_MODE_CREATE	include/mpiuni/mpi.h	198;"	d
MPI_MODE_RDONLY	include/mpiuni/mpi.h	196;"	d
MPI_MODE_WRONLY	include/mpiuni/mpi.h	197;"	d
MPI_NULL_COPY_FN	include/mpiuni/mpi.h	711;"	d
MPI_NULL_DELETE_FN	include/mpiuni/mpi.h	712;"	d
MPI_ORDER_FORTRAN	include/mpiuni/mpi.h	210;"	d
MPI_Offset	include/mpiuni/mpi.h	/^typedef int    MPI_Offset;$/;"	t
MPI_Op	include/mpiuni/mpi.h	/^typedef int MPI_Op;$/;"	t
MPI_Op_create	include/mpiuni/mpi.h	493;"	d
MPI_Op_free	include/mpiuni/mpi.h	498;"	d
MPI_PACKED	include/mpiuni/mpi.h	206;"	d
MPI_Pack	include/mpiuni/mpi.h	541;"	d
MPI_Pack_size	include/mpiuni/mpi.h	547;"	d
MPI_Pcontrol	include/mpiuni/mpi.h	709;"	d
MPI_Probe	include/mpiuni/mpi.h	431;"	d
MPI_REAL	include/mpiuni/mpif.h	/^       integer MPI_REAL,MPI_DOUBLE_PRECISION$/;"	v
MPI_REPLACE	include/mpiuni/mpi.h	203;"	d
MPI_REQUEST_NULL	include/mpiuni/mpi.h	190;"	d
MPI_Recv	include/mpiuni/mpi.h	283;"	d
MPI_Recv	include/petsclog.h	348;"	d
MPI_Recv_init	include/mpiuni/mpi.h	479;"	d
MPI_Reduce	include/mpiuni/mpi.h	626;"	d
MPI_Reduce_scatter	include/mpiuni/mpi.h	637;"	d
MPI_Register_datarep	include/mpiuni/mpi.h	758;"	d
MPI_Request	include/mpiuni/mpi.h	/^typedef void   *MPI_Request;$/;"	t
MPI_Request_free	include/mpiuni/mpi.h	383;"	d
MPI_Rsend	include/mpiuni/mpi.h	313;"	d
MPI_Rsend_init	include/mpiuni/mpi.h	470;"	d
MPI_SHORT	include/mpiuni/mpi.h	166;"	d
MPI_SHORT_INT	include/mpiuni/mpi.h	178;"	d
MPI_SIMILAR	include/mpiuni/mpi.h	128;"	d
MPI_SOURCE	include/mpiuni/mpi.h	/^typedef struct {int MPI_TAG,MPI_SOURCE,MPI_ERROR;} MPI_Status;$/;"	m	struct:__anon1
MPI_SOURCE	include/mpiuni/mpif.h	/^       INTEGER MPI_SOURCE,MPI_TAG,MPI_ERROR$/;"	v
MPI_STATUSES_IGNORE	include/mpiuni/mpi.h	209;"	d
MPI_STATUS_IGNORE	include/mpiuni/mpi.h	208;"	d
MPI_SUCCESS	include/mpiuni/mpi.h	125;"	d
MPI_SUM	include/mpiuni/mpi.h	200;"	d
MPI_Scan	include/mpiuni/mpi.h	633;"	d
MPI_Scatter	include/mpiuni/mpi.h	577;"	d
MPI_Scatter	include/petsclog.h	384;"	d
MPI_Scatterv	include/mpiuni/mpi.h	588;"	d
MPI_Scatterv	include/petsclog.h	387;"	d
MPI_Send	include/mpiuni/mpi.h	275;"	d
MPI_Send	include/petsclog.h	351;"	d
MPI_Send_init	include/mpiuni/mpi.h	434;"	d
MPI_Sendrecv	include/mpiuni/mpi.h	502;"	d
MPI_Sendrecv_replace	include/mpiuni/mpi.h	507;"	d
MPI_Ssend	include/mpiuni/mpi.h	305;"	d
MPI_Ssend_init	include/mpiuni/mpi.h	452;"	d
MPI_Start	include/mpiuni/mpi.h	488;"	d
MPI_Start_isend	include/petsclog.h	345;"	d
MPI_Start_isend	include/petsclog.h	398;"	d
MPI_Start_isend	include/petsclog.h	449;"	d
MPI_Startall	include/mpiuni/mpi.h	489;"	d
MPI_Startall_irecv	include/petsclog.h	339;"	d
MPI_Startall_irecv	include/petsclog.h	392;"	d
MPI_Startall_irecv	include/petsclog.h	447;"	d
MPI_Startall_isend	include/petsclog.h	342;"	d
MPI_Startall_isend	include/petsclog.h	395;"	d
MPI_Startall_isend	include/petsclog.h	448;"	d
MPI_Status	include/mpiuni/mpi.h	/^typedef struct {int MPI_TAG,MPI_SOURCE,MPI_ERROR;} MPI_Status;$/;"	t	typeref:struct:__anon1
MPI_TAG	include/mpiuni/mpi.h	/^typedef struct {int MPI_TAG,MPI_SOURCE,MPI_ERROR;} MPI_Status;$/;"	m	struct:__anon1
MPI_TAG	include/mpiuni/mpif.h	/^       INTEGER MPI_SOURCE,MPI_TAG,MPI_ERROR$/;"	v
MPI_TAG_UB	include/mpiuni/mpi.h	135;"	d
MPI_Test	include/mpiuni/mpi.h	378;"	d
MPI_Test_cancelled	include/mpiuni/mpi.h	433;"	d
MPI_Testall	include/mpiuni/mpi.h	404;"	d
MPI_Testany	include/mpiuni/mpi.h	392;"	d
MPI_Testsome	include/mpiuni/mpi.h	428;"	d
MPI_Topo_test	include/mpiuni/mpi.h	674;"	d
MPI_Type_commit	include/mpiuni/mpi.h	536;"	d
MPI_Type_contiguous	include/mpiuni/mpi.h	509;"	d
MPI_Type_create_subarray	include/mpiuni/mpi.h	766;"	d
MPI_Type_extent	include/mpiuni/mpi.h	530;"	d
MPI_Type_free	include/mpiuni/mpi.h	538;"	d
MPI_Type_get_extent	include/mpiuni/mpi.h	737;"	d
MPI_Type_hindexed	include/mpiuni/mpi.h	516;"	d
MPI_Type_hvector	include/mpiuni/mpi.h	512;"	d
MPI_Type_indexed	include/mpiuni/mpi.h	513;"	d
MPI_Type_lb	include/mpiuni/mpi.h	532;"	d
MPI_Type_size	include/mpiuni/mpi.h	531;"	d
MPI_Type_struct	include/mpiuni/mpi.h	519;"	d
MPI_Type_ub	include/mpiuni/mpi.h	534;"	d
MPI_Type_vector	include/mpiuni/mpi.h	511;"	d
MPI_UNDEFINED	include/mpiuni/mpi.h	137;"	d
MPI_UNEQUAL	include/mpiuni/mpi.h	129;"	d
MPI_UNSIGNED	include/mpiuni/mpi.h	168;"	d
MPI_UNSIGNED_CHAR	include/mpiuni/mpi.h	169;"	d
MPI_UNSIGNED_LONG	include/mpiuni/mpi.h	170;"	d
MPI_UNSIGNED_LONG_LONG	include/mpiuni/mpi.h	171;"	d
MPI_UNSIGNED_SHORT	include/mpiuni/mpi.h	167;"	d
MPI_Unpack	include/mpiuni/mpi.h	544;"	d
MPI_User_function	include/mpiuni/mpi.h	/^typedef void  (MPI_User_function)(void*, void *, int *, MPI_Datatype *);$/;"	t
MPI_Wait	include/mpiuni/mpi.h	374;"	d
MPI_Wait	include/petsclog.h	354;"	d
MPI_Waitall	include/mpiuni/mpi.h	399;"	d
MPI_Waitall	include/petsclog.h	360;"	d
MPI_Waitany	include/mpiuni/mpi.h	386;"	d
MPI_Waitany	include/petsclog.h	357;"	d
MPI_Waitsome	include/mpiuni/mpi.h	410;"	d
MPI_Wtick	include/mpiuni/mpi.h	707;"	d
MPI_Wtime	include/mpiuni/mpi.h	708;"	d
MPI_sizeof	include/mpiuni/mpi.h	183;"	d
MPI_sizeof	include/mpiuni/mpi.h	185;"	d
MPPTScotchStragegyType	include/finclude/petscmatdef.h	25;"	d
MPPTScotchStrategyType	include/petscmat.h	/^typedef enum { MP_PTSCOTCH_QUALITY,MP_PTSCOTCH_SPEED,MP_PTSCOTCH_BALANCE,MP_PTSCOTCH_SAFETY,MP_PTSCOTCH_SCALABILITY } MPPTScotchStrategyType;$/;"	t	typeref:enum:__anon101
MPPTScotchStrategyTypes	include/petscmat.h	/^PETSC_EXTERN const char *const MPPTScotchStrategyTypes[];$/;"	v
MP_CHACO_KERNIGHAN	include/petscmat.h	/^typedef enum { MP_CHACO_KERNIGHAN=1,MP_CHACO_NONE=2 } MPChacoLocalType;$/;"	e	enum:__anon99
MP_CHACO_LANCZOS	include/petscmat.h	/^typedef enum { MP_CHACO_LANCZOS=0,MP_CHACO_RQI=1 } MPChacoEigenType;$/;"	e	enum:__anon100
MP_CHACO_LINEAR	include/petscmat.h	/^typedef enum { MP_CHACO_MULTILEVEL=1,MP_CHACO_SPECTRAL=2,MP_CHACO_LINEAR=4,MP_CHACO_RANDOM=5,MP_CHACO_SCATTERED=6 } MPChacoGlobalType;$/;"	e	enum:__anon98
MP_CHACO_MULTILEVEL	include/petscmat.h	/^typedef enum { MP_CHACO_MULTILEVEL=1,MP_CHACO_SPECTRAL=2,MP_CHACO_LINEAR=4,MP_CHACO_RANDOM=5,MP_CHACO_SCATTERED=6 } MPChacoGlobalType;$/;"	e	enum:__anon98
MP_CHACO_NONE	include/petscmat.h	/^typedef enum { MP_CHACO_KERNIGHAN=1,MP_CHACO_NONE=2 } MPChacoLocalType;$/;"	e	enum:__anon99
MP_CHACO_RANDOM	include/petscmat.h	/^typedef enum { MP_CHACO_MULTILEVEL=1,MP_CHACO_SPECTRAL=2,MP_CHACO_LINEAR=4,MP_CHACO_RANDOM=5,MP_CHACO_SCATTERED=6 } MPChacoGlobalType;$/;"	e	enum:__anon98
MP_CHACO_RQI	include/petscmat.h	/^typedef enum { MP_CHACO_LANCZOS=0,MP_CHACO_RQI=1 } MPChacoEigenType;$/;"	e	enum:__anon100
MP_CHACO_SCATTERED	include/petscmat.h	/^typedef enum { MP_CHACO_MULTILEVEL=1,MP_CHACO_SPECTRAL=2,MP_CHACO_LINEAR=4,MP_CHACO_RANDOM=5,MP_CHACO_SCATTERED=6 } MPChacoGlobalType;$/;"	e	enum:__anon98
MP_CHACO_SPECTRAL	include/petscmat.h	/^typedef enum { MP_CHACO_MULTILEVEL=1,MP_CHACO_SPECTRAL=2,MP_CHACO_LINEAR=4,MP_CHACO_RANDOM=5,MP_CHACO_SCATTERED=6 } MPChacoGlobalType;$/;"	e	enum:__anon98
MP_PARTY_BUB	include/petscmat.h	1156;"	d
MP_PARTY_DEF	include/petscmat.h	1157;"	d
MP_PARTY_GBF	include/petscmat.h	1154;"	d
MP_PARTY_GCF	include/petscmat.h	1155;"	d
MP_PARTY_HELPFUL_SETS	include/petscmat.h	1159;"	d
MP_PARTY_KERNIGHAN_LIN	include/petscmat.h	1160;"	d
MP_PARTY_LIN	include/petscmat.h	1151;"	d
MP_PARTY_NONE	include/petscmat.h	1161;"	d
MP_PARTY_OPT	include/petscmat.h	1150;"	d
MP_PARTY_RAN	include/petscmat.h	1153;"	d
MP_PARTY_SCA	include/petscmat.h	1152;"	d
MP_PTSCOTCH_BALANCE	include/petscmat.h	/^typedef enum { MP_PTSCOTCH_QUALITY,MP_PTSCOTCH_SPEED,MP_PTSCOTCH_BALANCE,MP_PTSCOTCH_SAFETY,MP_PTSCOTCH_SCALABILITY } MPPTScotchStrategyType;$/;"	e	enum:__anon101
MP_PTSCOTCH_QUALITY	include/petscmat.h	/^typedef enum { MP_PTSCOTCH_QUALITY,MP_PTSCOTCH_SPEED,MP_PTSCOTCH_BALANCE,MP_PTSCOTCH_SAFETY,MP_PTSCOTCH_SCALABILITY } MPPTScotchStrategyType;$/;"	e	enum:__anon101
MP_PTSCOTCH_SAFETY	include/petscmat.h	/^typedef enum { MP_PTSCOTCH_QUALITY,MP_PTSCOTCH_SPEED,MP_PTSCOTCH_BALANCE,MP_PTSCOTCH_SAFETY,MP_PTSCOTCH_SCALABILITY } MPPTScotchStrategyType;$/;"	e	enum:__anon101
MP_PTSCOTCH_SCALABILITY	include/petscmat.h	/^typedef enum { MP_PTSCOTCH_QUALITY,MP_PTSCOTCH_SPEED,MP_PTSCOTCH_BALANCE,MP_PTSCOTCH_SAFETY,MP_PTSCOTCH_SCALABILITY } MPPTScotchStrategyType;$/;"	e	enum:__anon101
MP_PTSCOTCH_SPEED	include/petscmat.h	/^typedef enum { MP_PTSCOTCH_QUALITY,MP_PTSCOTCH_SPEED,MP_PTSCOTCH_BALANCE,MP_PTSCOTCH_SAFETY,MP_PTSCOTCH_SCALABILITY } MPPTScotchStrategyType;$/;"	e	enum:__anon101
MULTILEVEL_BDDC	include/petscpc.h	/^typedef enum {SEQUENTIAL_BDDC,REPLICATED_BDDC,PARALLEL_BDDC,MULTILEVEL_BDDC} CoarseProblemType;$/;"	e	enum:__anon54
Machine	config/BuildSystem/regression/buildtest.py	/^class Machine (object):$/;"	c
Make	config/BuildSystem/make.py	/^class Make(maker.Make):$/;"	c
Make	config/BuildSystem/maker.py	/^class Make(script.Script):$/;"	c
MakeParser	config/builder.py	/^class MakeParser(object):$/;"	c
Map_SieveCell_UFCCell	include/sieve/UFC.hh	/^void Map_SieveCell_UFCCell(ALE::Obj<PETSC_MESH_TYPE> m, PETSC_MESH_TYPE::point_type c, ufc::form * form, ufc::cell * cell, const PETSC_MESH_TYPE::point_type * _oPoints = NULL, const int _num_oPoints= -1) {$/;"	f
MarkVisitor	include/sieve/ISieve.hh	/^      MarkVisitor(Label& l, const int marker) : label(l), marker(marker) {};$/;"	f	class:ALE::ISieveVisitor::MarkVisitor
MarkVisitor	include/sieve/ISieve.hh	/^    class MarkVisitor {$/;"	c	namespace:ALE::ISieveVisitor
Mat	bin/matlab/classes/matlabheader.h	/^typedef PetscPointer Mat;$/;"	t
Mat	include/finclude/petscmatdef.h	11;"	d
Mat	include/petscmat.h	/^typedef struct _p_Mat*           Mat;$/;"	t	typeref:struct:_p_Mat
MatAIJIndices	include/finclude/petscmatdef.h	17;"	d
MatAssemblyType	bin/matlab/classes/matlabheader.h	/^typedef int MatAssemblyType;$/;"	t
MatAssemblyType	include/finclude/petscmatdef.h	26;"	d
MatAssemblyType	include/petscmat.h	/^typedef enum {MAT_FLUSH_ASSEMBLY=1,MAT_FINAL_ASSEMBLY=0} MatAssemblyType;$/;"	t	typeref:enum:__anon90
MatBaseName	include/petsc-private/matimpl.h	/^typedef struct _p_MatBaseName* MatBaseName;$/;"	t	typeref:struct:_p_MatBaseName
MatBaseNameList	include/petsc-private/matimpl.h	/^PETSC_EXTERN MatBaseName MatBaseNameList;$/;"	v
MatCUSPARSEFormatOperation	include/finclude/petscmatdef.h	147;"	d
MatCUSPARSEFormatOperation	include/petscmat.h	/^typedef enum {MAT_CUSPARSE_MULT_DIAG, MAT_CUSPARSE_MULT_OFFDIAG, MAT_CUSPARSE_MULT, MAT_CUSPARSE_SOLVE, MAT_CUSPARSE_ALL} MatCUSPARSEFormatOperation;$/;"	t	typeref:enum:__anon104
MatCUSPARSEStorageFormat	include/finclude/petscmatdef.h	146;"	d
MatCUSPARSEStorageFormat	include/petscmat.h	/^typedef enum {MAT_CUSPARSE_CSR, MAT_CUSPARSE_ELL, MAT_CUSPARSE_HYB} MatCUSPARSEStorageFormat;$/;"	t	typeref:enum:__anon103
MatCUSPARSEStorageFormats	include/petscmat.h	/^PETSC_EXTERN const char *const MatCUSPARSEStorageFormats[];$/;"	v
MatCUSPFormatOperation	include/finclude/petscmatdef.h	150;"	d
MatCUSPFormatOperation	include/petscmat.h	/^typedef enum {MAT_CUSP_MULT_DIAG, MAT_CUSP_MULT_OFFDIAG, MAT_CUSP_MULT, MAT_CUSP_SOLVE, MAT_CUSP_ALL} MatCUSPFormatOperation;$/;"	t	typeref:enum:__anon106
MatCUSPStorageFormat	include/finclude/petscmatdef.h	149;"	d
MatCUSPStorageFormat	include/petscmat.h	/^typedef enum {MAT_CUSP_CSR, MAT_CUSP_DIA, MAT_CUSP_ELL} MatCUSPStorageFormat;$/;"	t	typeref:enum:__anon105
MatCUSPStorageFormats	include/petscmat.h	/^PETSC_EXTERN const char *const MatCUSPStorageFormats[];$/;"	v
MatCheckPreallocated	include/petsc-private/matimpl.h	218;"	d
MatCheckPreallocated	include/petsc-private/matimpl.h	222;"	d
MatCoarsen	include/finclude/petscmatdef.h	16;"	d
MatCoarsen	include/petscmat.h	/^typedef struct _p_MatCoarsen* MatCoarsen;$/;"	t	typeref:struct:_p_MatCoarsen
MatCoarsenList	include/petscmat.h	/^PETSC_EXTERN PetscFunctionList MatCoarsenList;$/;"	v
MatCoarsenOps	include/petsc-private/matimpl.h	/^typedef struct _MatCoarsenOps *MatCoarsenOps;$/;"	t	typeref:struct:_MatCoarsenOps
MatCoarsenRegisterAllCalled	include/petscmat.h	/^PETSC_EXTERN PetscBool MatCoarsenRegisterAllCalled;$/;"	v
MatCoarsenType	include/finclude/petscmatdef.h	40;"	d
MatCoarsenType	include/petscmat.h	/^typedef const char* MatCoarsenType;$/;"	t
MatColoringList	include/petscmat.h	/^PETSC_EXTERN PetscFunctionList MatColoringList;$/;"	v
MatColoringRegisterAllCalled	include/petscmat.h	/^PETSC_EXTERN PetscBool MatColoringRegisterAllCalled;$/;"	v
MatColoringType	include/finclude/petscmatdef.h	34;"	d
MatColoringType	include/petscmat.h	/^typedef const char* MatColoringType;$/;"	t
MatCompositeType	include/finclude/petscmatdef.h	41;"	d
MatCompositeType	include/petscmat.h	/^typedef enum {MAT_COMPOSITE_ADDITIVE,MAT_COMPOSITE_MULTIPLICATIVE} MatCompositeType;$/;"	t	typeref:enum:__anon88
MatDense	bin/pythonscripts/PetscBinaryIO.py	/^class MatDense(np.matrix):$/;"	c
MatDuplicateOption	include/finclude/petscmatdef.h	37;"	d
MatDuplicateOption	include/petscmat.h	/^typedef enum {MAT_DO_NOT_COPY_VALUES,MAT_COPY_VALUES,MAT_SHARE_NONZERO_PATTERN} MatDuplicateOption;$/;"	t	typeref:enum:__anon92
MatFDColoring	include/finclude/petscmatdef.h	13;"	d
MatFDColoring	include/petscmat.h	/^typedef struct _p_MatFDColoring* MatFDColoring;$/;"	t	typeref:struct:_p_MatFDColoring
MatFactorInfo	include/finclude/petscmatdef.h	36;"	d
MatFactorInfo	include/petscmat.h	/^} MatFactorInfo;$/;"	t	typeref:struct:__anon96
MatFactorShiftType	include/finclude/petscmatdef.h	28;"	d
MatFactorShiftType	include/petscmat.h	/^typedef enum {MAT_SHIFT_NONE,MAT_SHIFT_NONZERO,MAT_SHIFT_POSITIVE_DEFINITE,MAT_SHIFT_INBLOCKS} MatFactorShiftType;$/;"	t	typeref:enum:__anon95
MatFactorShiftTypes	include/petscmat.h	/^PETSC_EXTERN const char *const MatFactorShiftTypes[];$/;"	v
MatFactorType	include/finclude/petscmatdef.h	27;"	d
MatFactorType	include/petscmat.h	/^typedef enum {MAT_FACTOR_NONE, MAT_FACTOR_LU, MAT_FACTOR_CHOLESKY, MAT_FACTOR_ILU, MAT_FACTOR_ICC,MAT_FACTOR_ILUDT} MatFactorType;$/;"	t	typeref:enum:__anon84
MatFactorTypes	include/petscmat.h	/^PETSC_EXTERN const char *const MatFactorTypes[];$/;"	v
MatGetSubMatrixOption	include/finclude/petscmatdef.h	21;"	d
MatGetSubMatrixOption	include/petscmat.h	/^typedef enum {MAT_DO_NOT_GET_VALUES,MAT_GET_VALUES} MatGetSubMatrixOption;$/;"	t	typeref:enum:__anon86
MatGetValue	include/petscmat.h	/^PETSC_STATIC_INLINE PetscErrorCode MatGetValue(Mat v,PetscInt i,PetscInt j,PetscScalar *va) {return MatGetValues(v,1,&i,1,&j,va);}$/;"	f
MatInfo	include/finclude/petscmatdef.h	35;"	d
MatInfo	include/petscmat.h	/^} MatInfo;$/;"	t	typeref:struct:__anon93
MatInfoType	include/finclude/petscmatdef.h	31;"	d
MatInfoType	include/petscmat.h	/^typedef enum {MAT_LOCAL=1,MAT_GLOBAL_MAX=2,MAT_GLOBAL_SUM=3} MatInfoType;$/;"	t	typeref:enum:__anon94
MatList	include/petscmat.h	/^PETSC_EXTERN PetscFunctionList MatList;$/;"	v
MatMFFD	include/finclude/petscsnesdef.h	16;"	d
MatMFFD	include/petscmat.h	/^typedef struct _p_MatMFFD* MatMFFD;$/;"	t	typeref:struct:_p_MatMFFD
MatMFFDType	include/finclude/petscsnesdef.h	17;"	d
MatMFFDType	include/petscmat.h	/^typedef const char* MatMFFDType;$/;"	t
MatNullSpace	include/finclude/petscmatdef.h	12;"	d
MatNullSpace	include/petscmat.h	/^typedef struct _p_MatNullSpace* MatNullSpace;$/;"	t	typeref:struct:_p_MatNullSpace
MatOperation	include/finclude/petscmatdef.h	33;"	d
MatOperation	include/petscmat.h	/^             } MatOperation;$/;"	t	typeref:enum:__anon102
MatOps	include/petsc-private/matimpl.h	/^typedef struct _MatOps *MatOps;$/;"	t	typeref:struct:_MatOps
MatOption	include/finclude/petscmatdef.h	20;"	d
MatOption	include/petscmat.h	/^              MAT_OPTION_MAX = 16} MatOption;$/;"	t	typeref:enum:__anon91
MatOptions	include/petscmat.h	/^PETSC_EXTERN const char *MatOptions[];$/;"	v
MatOrderingList	include/petscmat.h	/^PETSC_EXTERN PetscFunctionList MatOrderingList;$/;"	v
MatOrderingRegisterAllCalled	include/petscmat.h	/^PETSC_EXTERN PetscBool         MatOrderingRegisterAllCalled;$/;"	v
MatOrderingType	include/finclude/petscmatdef.h	29;"	d
MatOrderingType	include/petscmat.h	/^typedef const char* MatOrderingType;$/;"	t
MatPartitioning	include/finclude/petscmatdef.h	15;"	d
MatPartitioning	include/petscmat.h	/^typedef struct _p_MatPartitioning* MatPartitioning;$/;"	t	typeref:struct:_p_MatPartitioning
MatPartitioningList	include/petscmat.h	/^PETSC_EXTERN PetscFunctionList MatPartitioningList;$/;"	v
MatPartitioningOps	include/petsc-private/matimpl.h	/^typedef struct _MatPartitioningOps *MatPartitioningOps;$/;"	t	typeref:struct:_MatPartitioningOps
MatPartitioningRegisterAllCalled	include/petscmat.h	/^PETSC_EXTERN PetscBool MatPartitioningRegisterAllCalled;$/;"	v
MatPartitioningType	include/finclude/petscmatdef.h	39;"	d
MatPartitioningType	include/petscmat.h	/^typedef const char* MatPartitioningType;$/;"	t
MatPivotCheck	include/petsc-private/matimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode MatPivotCheck(Mat mat,const MatFactorInfo *info,FactorShiftCtx *sctx,PetscInt row)$/;"	f
MatPivotCheck_inblocks	include/petsc-private/matimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode MatPivotCheck_inblocks(Mat mat,const MatFactorInfo *info,FactorShiftCtx *sctx,PetscInt row)$/;"	f
MatPivotCheck_none	include/petsc-private/matimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode MatPivotCheck_none(Mat mat,const MatFactorInfo *info,FactorShiftCtx *sctx,PetscInt row)$/;"	f
MatPivotCheck_nz	include/petsc-private/matimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode MatPivotCheck_nz(Mat mat,const MatFactorInfo *info,FactorShiftCtx *sctx,PetscInt row)$/;"	f
MatPivotCheck_pd	include/petsc-private/matimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode MatPivotCheck_pd(Mat mat,const MatFactorInfo *info,FactorShiftCtx *sctx,PetscInt row)$/;"	f
MatPreallocateFinalize	include/petscmat.h	856;"	d
MatPreallocateInitialize	include/petscmat.h	613;"	d
MatPreallocateLocation	include/petscmat.h	824;"	d
MatPreallocateSet	include/petscmat.h	741;"	d
MatPreallocateSetLocal	include/petscmat.h	655;"	d
MatPreallocateSymmetricSet	include/petscmat.h	784;"	d
MatPreallocateSymmetricSetLocal	include/petscmat.h	697;"	d
MatReal	include/petscmath.h	/^typedef PetscReal MatReal;$/;"	t
MatRegisterAllCalled	include/petscmat.h	/^PETSC_EXTERN PetscBool         MatRegisterAllCalled;$/;"	v
MatReuse	include/finclude/petscmatdef.h	32;"	d
MatReuse	include/petscmat.h	/^typedef enum {MAT_INITIAL_MATRIX,MAT_REUSE_MATRIX,MAT_IGNORE_MATRIX} MatReuse;$/;"	t	typeref:enum:__anon85
MatSORType	include/finclude/petscmatdef.h	30;"	d
MatSORType	include/petscmat.h	/^              SOR_EISENSTAT=32,SOR_APPLY_UPPER=64,SOR_APPLY_LOWER=128} MatSORType;$/;"	t	typeref:enum:__anon97
MatScalar	include/finclude/petscsysdef.h	169;"	d
MatScalar	include/petscmath.h	/^typedef PetscScalar MatScalar;$/;"	t
MatSetValue	include/petscmat.h	/^PETSC_STATIC_INLINE PetscErrorCode MatSetValue(Mat v,PetscInt i,PetscInt j,PetscScalar va,InsertMode mode) {return MatSetValues(v,1,&i,1,&j,&va,mode);}$/;"	f
MatSetValueLocal	include/petscmat.h	/^PETSC_STATIC_INLINE PetscErrorCode MatSetValueLocal(Mat v,PetscInt i,PetscInt j,PetscScalar va,InsertMode mode) {return MatSetValuesLocal(v,1,&i,1,&j,&va,mode);}$/;"	f
MatSetValuesTopology	src/dm/impls/mesh/mesh.c	/^PetscErrorCode MatSetValuesTopology(Mat mat, DM dmr, PetscInt nrow, const PetscInt rowPoints[], DM dmc, PetscInt ncol, const PetscInt colPoints[], const PetscScalar v[], InsertMode mode)$/;"	f
MatSolverPackage	include/finclude/petscmatdef.h	19;"	d
MatSolverPackage	include/petscmat.h	98;"	d
MatSparse	bin/pythonscripts/PetscBinaryIO.py	/^class MatSparse(tuple):$/;"	c
MatStash	include/petsc-private/matimpl.h	/^} MatStash;$/;"	t	typeref:struct:__anon1
MatStencil	bin/matlab/classes/matlabheader.h	/^} MatStencil;$/;"	t	typeref:struct:__anon1
MatStencil	include/finclude/petscmatdef.h	42;"	d
MatStencil	include/petscmat.h	/^} MatStencil;$/;"	t	typeref:struct:__anon89
MatStencilInfo	include/petsc-private/matimpl.h	/^} MatStencilInfo;$/;"	t	typeref:struct:__anon2
MatStencil_c	include/finclude/petscmatdef.h	46;"	d
MatStencil_i	include/finclude/petscmatdef.h	45;"	d
MatStencil_j	include/finclude/petscmatdef.h	44;"	d
MatStencil_k	include/finclude/petscmatdef.h	43;"	d
MatStructure	bin/matlab/classes/matlabheader.h	/^typedef int MatStructure;$/;"	t
MatStructure	include/finclude/petscmatdef.h	38;"	d
MatStructure	include/petscmat.h	/^typedef enum {DIFFERENT_NONZERO_PATTERN,SUBSET_NONZERO_PATTERN,SAME_NONZERO_PATTERN,SAME_PRECONDITIONER} MatStructure;$/;"	t	typeref:enum:__anon87
MatTransposeColoring	include/petscmat.h	/^typedef struct _p_MatTransposeColoring* MatTransposeColoring;$/;"	t	typeref:struct:_p_MatTransposeColoring
MatType	include/finclude/petscmatdef.h	18;"	d
MatType	include/petscmat.h	/^typedef const char* MatType;$/;"	t
Mat_CompressedRow	include/petsc-private/matimpl.h	/^} Mat_CompressedRow;$/;"	t	typeref:struct:__anon3
MaxConeVisitor	include/sieve/Mesh.hh	/^      MaxConeVisitor(label_type& l, const int defValue) : LabelVisitor(l, defValue) {};$/;"	f	class:ALE::IBundle::MaxConeVisitor
MaxConeVisitor	include/sieve/Mesh.hh	/^    class MaxConeVisitor : public LabelVisitor {$/;"	c	class:ALE::IBundle
MaxSupportVisitor	include/sieve/Mesh.hh	/^      MaxSupportVisitor(label_type& l, const int defValue) : LabelVisitor(l, defValue) {};$/;"	f	class:ALE::IBundle::MaxSupportVisitor
MaxSupportVisitor	include/sieve/Mesh.hh	/^    class MaxSupportVisitor : public LabelVisitor {$/;"	c	class:ALE::IBundle
MeetVisitor	include/sieve/Partitioner.hh	/^      MeetVisitor(const Sieve& s, Manager& manager, Recognizer& faceRecognizer, const int n) : sieve(s), manager(manager), faceRecognizer(faceRecognizer), numCells(n) {$/;"	f	class:ALE::Partitioner::MeetVisitor
MeetVisitor	include/sieve/Partitioner.hh	/^    class MeetVisitor {$/;"	c	class:ALE::Partitioner
MemTest	src/dm/impls/mesh/examples/tests/ex00.c	/^PetscErrorCode MemTest()$/;"	f
MemoryLogger	include/sieve/ALE_mem.hh	/^    MemoryLogger(): _debug(0), _comm(MPI_COMM_NULL), rank(-1) {$/;"	f	class:ALE::MemoryLogger
MemoryLogger	include/sieve/ALE_mem.hh	/^  class MemoryLogger {$/;"	c	namespace:ALE
MemoryTestIMesh	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^class MemoryTestIMesh : public CppUnit::TestFixture$/;"	c	file:
MemoryTestISieve	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^class MemoryTestISieve : public CppUnit::TestFixture$/;"	c	file:
MemoryTestSTL	src/dm/impls/mesh/examples/tests/stl1.cxx	/^class MemoryTestSTL : public CppUnit::TestFixture$/;"	c	file:
MemoryTests	src/dm/impls/mesh/examples/tests/memoryTests.py	/^class MemoryTests(script.Script):$/;"	c
Mesh	include/petscdmmesh_formats.hh	/^      typedef PETSC_MESH_TYPE               Mesh;$/;"	t	class:ALE::PFLOTRAN::Builder
Mesh	include/petscdmmesh_formats.hh	/^      typedef PETSC_MESH_TYPE               Mesh;$/;"	t	class:ALE::PyLith::Builder
Mesh	include/petscdmmesh_formats.hh	/^      typedef PETSC_MESH_TYPE             Mesh;$/;"	t	class:ALE::Bardhan::Builder
Mesh	include/petscdmmesh_formats.hh	/^      typedef PETSC_MESH_TYPE             Mesh;$/;"	t	class:ALE::LaGriT::Builder
Mesh	include/petscdmmesh_formats.hh	/^      typedef PETSC_MESH_TYPE         Mesh;$/;"	t	class:ALE::PCICE::Builder
Mesh	include/petscdmmesh_formats.hh	/^      typedef PETSC_MESH_TYPE Mesh;$/;"	t	class:ALE::PCICE::Viewer
Mesh	include/petscdmmesh_formats.hh	/^      typedef PETSC_MESH_TYPE Mesh;$/;"	t	class:ALE::PFLOTRAN::Viewer
Mesh	include/petscdmmesh_formats.hh	/^      typedef PETSC_MESH_TYPE Mesh;$/;"	t	class:ALE::PyLith::Viewer
Mesh	include/sieve/Mesh.hh	/^    Mesh(MPI_Comm comm, int dim, int debug = 0) : base_type(comm, debug), _dim(dim) {$/;"	f	class:ALE::Mesh
Mesh	include/sieve/Mesh.hh	/^  class Mesh : public Bundle<ALE::Sieve<IndexType,IndexType,IndexType>, GeneralSection<IndexType,ScalarType> > {$/;"	c	namespace:ALE
MeshBuilder	include/sieve/Mesh.hh	/^  class MeshBuilder {$/;"	c	namespace:ALE
MeshManager	include/sieve/Partitioner.hh	/^      MeshManager(const Obj<Mesh>& mesh, const int height = 0): mesh(mesh) {$/;"	f	class:ALE::Partitioner::MeshManager
MeshManager	include/sieve/Partitioner.hh	/^    class MeshManager {$/;"	c	class:ALE::Partitioner
MeshNConeRetriever	include/sieve/ISieve.hh	/^      MeshNConeRetriever(const Mesh& m, const int depth, const size_t size) : PointRetriever<typename Mesh::Sieve,Visitor>(size, true), mesh(m), depth(depth) {};$/;"	f	class:ALE::ISieveVisitor::MeshNConeRetriever
MeshNConeRetriever	include/sieve/ISieve.hh	/^      MeshNConeRetriever(const Mesh& m, const int depth, const size_t size, Visitor& v) : PointRetriever<typename Mesh::Sieve,Visitor>(size, v, true), mesh(m), depth(depth) {};$/;"	f	class:ALE::ISieveVisitor::MeshNConeRetriever
MeshNConeRetriever	include/sieve/ISieve.hh	/^    class MeshNConeRetriever : public PointRetriever<typename Mesh::sieve_type,Visitor> {$/;"	c	namespace:ALE::ISieveVisitor
MeshNumberingFactory	include/sieve/Mesh.hh	/^    typedef NumberingFactory<this_type>                               MeshNumberingFactory;$/;"	t	class:ALE::Bundle
MeshNumberingFactory	include/sieve/Mesh.hh	/^    typedef NumberingFactory<this_type>                               MeshNumberingFactory;$/;"	t	class:ALE::IBundle
MeshProcessor	src/dm/impls/mesh/examples/tests/meshTest.hh	/^    class MeshProcessor {$/;"	c	namespace:ALE::Test
MeshRefineSingularity	include/sieve/DMBuilder.hh	/^    static PetscErrorCode MeshRefineSingularity(DM mesh, double * singularity, double factor, DM *refinedMesh) {$/;"	f	class:ALE::DMBuilder
MeshRefineSingularity_Fichera	include/sieve/DMBuilder.hh	/^    static PetscErrorCode MeshRefineSingularity_Fichera(DM mesh, double * singularity, double factor, DM *refinedMesh) {$/;"	f	class:ALE::DMBuilder
MeshSerializer	include/sieve/Mesh.hh	/^  class MeshSerializer {$/;"	c	namespace:ALE
MeshTest	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^PetscErrorCode MeshTest(const Options *options)$/;"	f
MinimalArrow	include/sieve/ALE_containers.hh	/^    MinimalArrow() {};$/;"	f	struct:ALE::MinimalArrow
MinimalArrow	include/sieve/ALE_containers.hh	/^    MinimalArrow(const MinimalArrow& a) : source(a.source), target(a.target) {};$/;"	f	struct:ALE::MinimalArrow
MinimalArrow	include/sieve/ALE_containers.hh	/^    MinimalArrow(const source_type& source, const target_type& target) : source(source), target(target) {};$/;"	f	struct:ALE::MinimalArrow
MinimalArrow	include/sieve/ALE_containers.hh	/^  struct MinimalArrow {$/;"	s	namespace:ALE
MissingProcessor	config/BuildSystem/config/compilers.py	/^class MissingProcessor(RuntimeError):$/;"	c
MixedTest	src/dm/impls/mesh/examples/tests/discretization1.cxx	/^PetscErrorCode MixedTest(const Obj<ALE::Mesh>& mesh, Options *options)$/;"	f
Mo	include/petsc-private/dmdaimpl.h	/^  PetscInt              Mo,No,Po;              \/* the size of the problem the offset is in to *\/$/;"	m	struct:__anon23
MyDMMeshCreateExodus	src/dm/impls/mesh/examples/tests/TestMeshExodus.c	/^PetscErrorCode MyDMMeshCreateExodus(MPI_Comm comm,const char filename[],DM *dmBody,DM *dmFS)$/;"	f
MyPetscReadExodusII	src/dm/impls/mesh/examples/tests/TestMeshExodus.c	/^PetscErrorCode MyPetscReadExodusII(MPI_Comm comm,const char filename[],DM dmBody,DM dmFS)$/;"	f
N	include/petsc-private/dmdaimpl.h	/^  PetscInt              M,N,P;                 \/* array dimensions *\/$/;"	m	struct:__anon23
N	include/petsc-private/matimpl.h	/^  PetscInt       M,N,m;            \/* total rows, columns; local rows *\/$/;"	m	struct:_p_MatFDColoring
N	include/petsc-private/matimpl.h	/^  PetscInt       M,N,m;            \/* total rows, columns; local rows *\/$/;"	m	struct:_p_MatTransposeColoring
N	include/petscis.h	/^  PetscInt               n,N;         \/* local, global vector size *\/$/;"	m	struct:_n_PetscLayout
N	include/petscis.h	/^  PetscInt        N;                \/* number of columns *\/$/;"	m	struct:_n_ISColoring
NConeRetriever	include/sieve/ISieve.hh	/^      NConeRetriever(const Sieve& s, const size_t size) : PointRetriever<Sieve,Visitor>(size, true), sieve(s) {};$/;"	f	class:ALE::ISieveVisitor::NConeRetriever
NConeRetriever	include/sieve/ISieve.hh	/^      NConeRetriever(const Sieve& s, const size_t size, Visitor& v) : PointRetriever<Sieve,Visitor>(size, v, true), sieve(s) {};$/;"	f	class:ALE::ISieveVisitor::NConeRetriever
NConeRetriever	include/sieve/ISieve.hh	/^    class NConeRetriever : public PointRetriever<Sieve,Visitor> {$/;"	c	namespace:ALE::ISieveVisitor
NEW_LABEL	include/sieve/Distribution.hh	756;"	d
NEW_LABEL	include/sieve/Generator.hh	438;"	d
NLF	include/petscdm.h	/^typedef struct NLF_DAAD* NLF;$/;"	t	typeref:struct:NLF_DAAD
NORM_1	include/petscvec.h	/^typedef enum {NORM_1=0,NORM_2=1,NORM_FROBENIUS=2,NORM_INFINITY=3,NORM_1_AND_2=4} NormType;$/;"	e	enum:__anon38
NORM_1_AND_2	include/petscvec.h	/^typedef enum {NORM_1=0,NORM_2=1,NORM_FROBENIUS=2,NORM_INFINITY=3,NORM_1_AND_2=4} NormType;$/;"	e	enum:__anon38
NORM_2	include/petscvec.h	/^typedef enum {NORM_1=0,NORM_2=1,NORM_FROBENIUS=2,NORM_INFINITY=3,NORM_1_AND_2=4} NormType;$/;"	e	enum:__anon38
NORM_FROBENIUS	include/petscvec.h	/^typedef enum {NORM_1=0,NORM_2=1,NORM_FROBENIUS=2,NORM_INFINITY=3,NORM_1_AND_2=4} NormType;$/;"	e	enum:__anon38
NORM_INFINITY	include/petscvec.h	/^typedef enum {NORM_1=0,NORM_2=1,NORM_FROBENIUS=2,NORM_INFINITY=3,NORM_1_AND_2=4} NormType;$/;"	e	enum:__anon38
NORM_MAX	include/petscvec.h	155;"	d
NOTHREAD	include/petscthreadcomm.h	29;"	d
NOT_SET_VALUES	include/petscsys.h	/^ typedef enum {NOT_SET_VALUES, INSERT_VALUES, ADD_VALUES, MAX_VALUES, INSERT_ALL_VALUES, ADD_ALL_VALUES, INSERT_BC_VALUES, ADD_BC_VALUES} InsertMode;$/;"	e	enum:__anon31
NP	src/dm/impls/mesh/examples/tests/makefile	/^NP              = 1$/;"	m
NP	src/dm/impls/mesh/examples/tests/makefile	/^NP = 1$/;"	m
NP	src/dm/impls/mesh/examples/tutorials/makefile	/^NP              = 1$/;"	m
NUM_COEFFICIENTS	src/dm/impls/mesh/examples/tutorials/makefile	/^NUM_COEFFICIENTS = ${NUM_TERMS}*${NUM_TERMS}*3$/;"	m
NUM_PETSC_UNITS	include/petscdm.h	/^typedef enum {PETSC_UNIT_LENGTH, PETSC_UNIT_MASS, PETSC_UNIT_TIME, PETSC_UNIT_CURRENT, PETSC_UNIT_TEMPERATURE, PETSC_UNIT_AMOUNT, PETSC_UNIT_LUMINOSITY, NUM_PETSC_UNITS} PetscUnit;$/;"	e	enum:__anon21
NUM_TERMS	src/dm/impls/mesh/examples/tutorials/makefile	/^NUM_TERMS        = 10$/;"	m
Need	config/BuildSystem/RDict.py	/^    import RDict # Need this to locate server script$/;"	i
New	include/sieve/Completion.hh	/^  namespace New {$/;"	n	namespace:ALE
New	include/sieve/Partitioner.hh	/^  namespace New {$/;"	n	namespace:ALE
New	include/sieve/SectionCompletion.hh	/^  namespace New {$/;"	n	namespace:ALE
New	include/sieve/Sections.hh	/^  namespace New {$/;"	n	namespace:ALE
NewLabelTest	src/dm/impls/mesh/examples/tests/mesh1.cxx	/^PetscErrorCode NewLabelTest(const Obj<ALE::Mesh>& mesh, const Obj<new_label_type>& label, Options *options)$/;"	f
NewPackage	config/PETSc/package.py	/^class NewPackage(config.package.Package):$/;"	c
NewSifterDef	include/sieve/LabelSifter.hh	/^  namespace NewSifterDef {$/;"	n	namespace:ALE
NewUniformSection	include/sieve/Field.hh	/^    NewUniformSection(MPI_Comm comm, const int debug = 0) : ParallelObject(comm, debug), _chart(_array), _contiguous_array_size(0), _contiguous_array(NULL) {$/;"	f	class:ALE::NewUniformSection
NewUniformSection	include/sieve/Field.hh	/^    NewUniformSection(const Obj<atlas_type>& atlas) : ParallelObject(atlas->comm(), atlas->debug()), _chart(_array), _contiguous_array_size(0), _contiguous_array(NULL), _atlas(atlas) {$/;"	f	class:ALE::NewUniformSection
NewUniformSection	include/sieve/Field.hh	/^  class NewUniformSection : public ALE::ParallelObject {$/;"	c	namespace:ALE
Nl	include/petsc-private/dmdaimpl.h	/^  PetscInt              *idx,Nl;               \/* local to global map *\/$/;"	m	struct:__anon23
Nlocal	include/petsc-private/dmdaimpl.h	/^  PetscInt              nlocal,Nlocal;         \/* local size of local vector and global vector, includes the * w term *\/$/;"	m	struct:__anon23
No	include/petsc-private/dmdaimpl.h	/^  PetscInt              Mo,No,Po;              \/* the size of the problem the offset is in to *\/$/;"	m	struct:__anon23
NoAssemblyTest	src/dm/impls/mesh/examples/tests/operator1.cxx	/^PetscErrorCode NoAssemblyTest(const Obj<ALE::Mesh>& m, Options *options)$/;"	f
NoMatch	config/BuildSystem/patch.py	/^    class NoMatch(Exception):$/;"	c	function:PatchSet._match_file_hunks
NormIds	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscInt  NormIds[7];  \/* map from NormType to IDs used to cache\/retreive values of norms *\/$/;"	v
NormType	include/finclude/petscvecdef.h	15;"	d
NormType	include/petscvec.h	/^typedef enum {NORM_1=0,NORM_2=1,NORM_FROBENIUS=2,NORM_INFINITY=3,NORM_1_AND_2=4} NormType;$/;"	t	typeref:enum:__anon38
NormTypes	include/petscvec.h	/^PETSC_EXTERN const char *const NormTypes[];$/;"	v
Nsub	include/petsc-private/dmdaimpl.h	/^  PetscInt              Nsub;                  \/* number of local subdomains to decompose into *\/$/;"	m	struct:__anon23
NullSourceDatabase	config/builder.py	/^class NullSourceDatabase(object):$/;"	c
NullSpaceFunc	include/petsc-private/dmimpl.h	/^typedef PetscErrorCode (*NullSpaceFunc)(DM dm, PetscInt field, MatNullSpace *nullSpace);$/;"	t
NullVisitor	include/sieve/ISieve.hh	/^    class NullVisitor {$/;"	c	namespace:ALE::ISieveVisitor
Numbering	include/sieve/Numbering.hh	/^    Numbering(MPI_Comm comm, const int debug = 0) : UniformSection<Point_, Value_, 1, Alloc_>(comm, debug), _localSize(0) {$/;"	f	class:ALE::Numbering
Numbering	include/sieve/Numbering.hh	/^  class Numbering : public UniformSection<Point_, Value_, 1, Alloc_> {$/;"	c	namespace:ALE
NumberingFactory	include/sieve/Numbering.hh	/^    NumberingFactory(MPI_Comm comm, const int debug = 0) : ALE::ParallelObject(comm, debug), _unknownNumber(-1), _unknownOrder(-1, 0) {};$/;"	f	class:ALE::NumberingFactory
NumberingFactory	include/sieve/Numbering.hh	/^  class NumberingFactory : public ALE::ParallelObject {$/;"	c	namespace:ALE
NumberingTest	src/dm/impls/mesh/examples/tests/overlap2.cxx	/^PetscErrorCode NumberingTest(const Obj<topology_type>& topology, Options *options)$/;"	f
OMPI_SKIP_MPICXX	include/petscsys.h	91;"	d
OPENMP	include/petscthreadcomm.h	30;"	d
OPTION_ELIST	include/petscoptions.h	/^typedef enum {OPTION_INT,OPTION_LOGICAL,OPTION_REAL,OPTION_LIST,OPTION_STRING,OPTION_REAL_ARRAY,OPTION_HEAD,OPTION_INT_ARRAY,OPTION_ELIST,OPTION_LOGICAL_ARRAY,OPTION_STRING_ARRAY} PetscOptionType;$/;"	e	enum:__anon34
OPTION_HEAD	include/petscoptions.h	/^typedef enum {OPTION_INT,OPTION_LOGICAL,OPTION_REAL,OPTION_LIST,OPTION_STRING,OPTION_REAL_ARRAY,OPTION_HEAD,OPTION_INT_ARRAY,OPTION_ELIST,OPTION_LOGICAL_ARRAY,OPTION_STRING_ARRAY} PetscOptionType;$/;"	e	enum:__anon34
OPTION_INT	include/petscoptions.h	/^typedef enum {OPTION_INT,OPTION_LOGICAL,OPTION_REAL,OPTION_LIST,OPTION_STRING,OPTION_REAL_ARRAY,OPTION_HEAD,OPTION_INT_ARRAY,OPTION_ELIST,OPTION_LOGICAL_ARRAY,OPTION_STRING_ARRAY} PetscOptionType;$/;"	e	enum:__anon34
OPTION_INT_ARRAY	include/petscoptions.h	/^typedef enum {OPTION_INT,OPTION_LOGICAL,OPTION_REAL,OPTION_LIST,OPTION_STRING,OPTION_REAL_ARRAY,OPTION_HEAD,OPTION_INT_ARRAY,OPTION_ELIST,OPTION_LOGICAL_ARRAY,OPTION_STRING_ARRAY} PetscOptionType;$/;"	e	enum:__anon34
OPTION_LIST	include/petscoptions.h	/^typedef enum {OPTION_INT,OPTION_LOGICAL,OPTION_REAL,OPTION_LIST,OPTION_STRING,OPTION_REAL_ARRAY,OPTION_HEAD,OPTION_INT_ARRAY,OPTION_ELIST,OPTION_LOGICAL_ARRAY,OPTION_STRING_ARRAY} PetscOptionType;$/;"	e	enum:__anon34
OPTION_LOGICAL	include/petscoptions.h	/^typedef enum {OPTION_INT,OPTION_LOGICAL,OPTION_REAL,OPTION_LIST,OPTION_STRING,OPTION_REAL_ARRAY,OPTION_HEAD,OPTION_INT_ARRAY,OPTION_ELIST,OPTION_LOGICAL_ARRAY,OPTION_STRING_ARRAY} PetscOptionType;$/;"	e	enum:__anon34
OPTION_LOGICAL_ARRAY	include/petscoptions.h	/^typedef enum {OPTION_INT,OPTION_LOGICAL,OPTION_REAL,OPTION_LIST,OPTION_STRING,OPTION_REAL_ARRAY,OPTION_HEAD,OPTION_INT_ARRAY,OPTION_ELIST,OPTION_LOGICAL_ARRAY,OPTION_STRING_ARRAY} PetscOptionType;$/;"	e	enum:__anon34
OPTION_REAL	include/petscoptions.h	/^typedef enum {OPTION_INT,OPTION_LOGICAL,OPTION_REAL,OPTION_LIST,OPTION_STRING,OPTION_REAL_ARRAY,OPTION_HEAD,OPTION_INT_ARRAY,OPTION_ELIST,OPTION_LOGICAL_ARRAY,OPTION_STRING_ARRAY} PetscOptionType;$/;"	e	enum:__anon34
OPTION_REAL_ARRAY	include/petscoptions.h	/^typedef enum {OPTION_INT,OPTION_LOGICAL,OPTION_REAL,OPTION_LIST,OPTION_STRING,OPTION_REAL_ARRAY,OPTION_HEAD,OPTION_INT_ARRAY,OPTION_ELIST,OPTION_LOGICAL_ARRAY,OPTION_STRING_ARRAY} PetscOptionType;$/;"	e	enum:__anon34
OPTION_STRING	include/petscoptions.h	/^typedef enum {OPTION_INT,OPTION_LOGICAL,OPTION_REAL,OPTION_LIST,OPTION_STRING,OPTION_REAL_ARRAY,OPTION_HEAD,OPTION_INT_ARRAY,OPTION_ELIST,OPTION_LOGICAL_ARRAY,OPTION_STRING_ARRAY} PetscOptionType;$/;"	e	enum:__anon34
OPTION_STRING_ARRAY	include/petscoptions.h	/^typedef enum {OPTION_INT,OPTION_LOGICAL,OPTION_REAL,OPTION_LIST,OPTION_STRING,OPTION_REAL_ARRAY,OPTION_HEAD,OPTION_INT_ARRAY,OPTION_ELIST,OPTION_LOGICAL_ARRAY,OPTION_STRING_ARRAY} PetscOptionType;$/;"	e	enum:__anon34
ORDER	src/dm/impls/mesh/examples/tutorials/makefile	/^ORDER           = 2$/;"	m
OUTSIDE	include/petscdmmesh_formats.hh	/^      enum ParserState {OUTSIDE, INSIDE_MESH, INSIDE_VERTICES, INSIDE_CELLS, DONE};$/;"	e	enum:ALE::Dolfin::XMLMesh::ParserState
Obj	include/sieve/ALE_mem.hh	/^    Obj() : objPtr((X *)NULL), refCnt((int*)NULL), sz(0) {};$/;"	f	class:ALE::Obj
Obj	include/sieve/ALE_mem.hh	/^  Obj<X,A>::Obj(X *_xx, int *_refCnt, size_type _sz) {  \/\/ This is intended to be private.$/;"	f	class:ALE::Obj
Obj	include/sieve/ALE_mem.hh	/^  Obj<X,A>::Obj(X *xx){\/\/ such an object will be destroyed by calling 'delete' on its pointer$/;"	f	class:ALE::Obj
Obj	include/sieve/ALE_mem.hh	/^  Obj<X,A>::Obj(X *xx, size_type sz){\/\/ such an object will be destroyed by the allocator$/;"	f	class:ALE::Obj
Obj	include/sieve/ALE_mem.hh	/^  Obj<X,A>::Obj(const Obj& obj) {$/;"	f	class:ALE::Obj
Obj	include/sieve/ALE_mem.hh	/^  Obj<X,A>::Obj(const X& x) {$/;"	f	class:ALE::Obj
Obj	include/sieve/ALE_mem.hh	/^  class Obj {$/;"	c	namespace:ALE
Obj	src/dm/impls/mesh/examples/tutorials/ex_coarsen.c	/^using ALE::Obj;$/;"	m	class:ALE	file:
Obj	src/dm/impls/mesh/examples/tutorials/ex_coarsen_2.c	/^using ALE::Obj;$/;"	m	class:ALE	file:
Obj	src/dm/impls/mesh/examples/tutorials/ex_coarsen_3.c	/^using ALE::Obj;$/;"	m	class:ALE	file:
Object	include/petsc-private/logimpl.h	/^} Object;$/;"	t	typeref:struct:_Object
OffsetVisitor	include/sieve/Partitioner.hh	/^      OffsetVisitor(const Sieve& s, const Sieve& ovS, int off[]) : sieve(s), overlapSieve(ovS), offsets(off) {};$/;"	f	class:ALE::Partitioner::OffsetVisitor
OffsetVisitor	include/sieve/Partitioner.hh	/^    class OffsetVisitor {$/;"	c	class:ALE::Partitioner
Open	config/BuildSystem/build/bk.py	/^class Open (build.transform.Transform):$/;"	c
OptionParser	config/BuildSystem/patch.py	/^  from optparse import OptionParser$/;"	i
Options	src/dm/impls/mesh/examples/tests/closure1.cxx	/^} Options;$/;"	t	typeref:struct:__anon7	file:
Options	src/dm/impls/mesh/examples/tests/discretization1.cxx	/^} Options;$/;"	t	typeref:struct:__anon3	file:
Options	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^} Options;$/;"	t	typeref:struct:__anon14	file:
Options	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^} Options;$/;"	t	typeref:struct:__anon5	file:
Options	src/dm/impls/mesh/examples/tests/mesh1.cxx	/^} Options;$/;"	t	typeref:struct:__anon4	file:
Options	src/dm/impls/mesh/examples/tests/mesh2.cxx	/^} Options;$/;"	t	typeref:struct:__anon1	file:
Options	src/dm/impls/mesh/examples/tests/meshing.cxx	/^} Options;$/;"	t	typeref:struct:__anon6	file:
Options	src/dm/impls/mesh/examples/tests/operator1.cxx	/^} Options;$/;"	t	typeref:struct:__anon19	file:
Options	src/dm/impls/mesh/examples/tests/overlap1.cxx	/^} Options;$/;"	t	typeref:struct:__anon9	file:
Options	src/dm/impls/mesh/examples/tests/overlap2.cxx	/^} Options;$/;"	t	typeref:struct:__anon13	file:
Options	src/dm/impls/mesh/examples/tests/refinementTest.cxx	/^} Options;$/;"	t	typeref:struct:__anon10	file:
Options	src/dm/impls/mesh/examples/tests/section1-old.cxx	/^} Options;$/;"	t	typeref:struct:__anon22	file:
Options	src/dm/impls/mesh/examples/tests/section2.cxx	/^} Options;$/;"	t	typeref:struct:__anon20	file:
Options	src/dm/impls/mesh/examples/tests/sieve2-old.cxx	/^} Options;$/;"	t	typeref:struct:__anon18	file:
Options	src/dm/impls/mesh/examples/tests/sieveTests.cxx	/^} Options;$/;"	t	typeref:struct:__anon11	file:
Options	src/dm/impls/mesh/examples/tests/sifter1.cxx	/^} Options;$/;"	t	typeref:struct:__anon8	file:
Options	src/dm/impls/mesh/examples/tests/stl1.cxx	/^} Options;$/;"	t	typeref:struct:__anon2	file:
Options	src/dm/impls/mesh/examples/tests/topology1.cxx	/^} Options;$/;"	t	typeref:struct:__anon21	file:
Options	src/dm/impls/mesh/examples/tests/unitTests.cxx	/^} Options;$/;"	t	typeref:struct:__anon23	file:
Options	src/dm/impls/mesh/examples/tutorials/ex1.c	/^} Options;$/;"	t	typeref:struct:__anon6	file:
Options	src/dm/impls/mesh/examples/tutorials/ex_coarsen.c	/^} Options;$/;"	t	typeref:struct:__anon7	file:
Options	src/dm/impls/mesh/examples/tutorials/ex_coarsen_2.c	/^} Options;$/;"	t	typeref:struct:__anon8	file:
Options	src/dm/impls/mesh/examples/tutorials/ex_coarsen_3.c	/^} Options;$/;"	t	typeref:struct:__anon1	file:
Options	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^} Options;$/;"	t	typeref:struct:__anon3	file:
Options	src/dm/impls/mesh/examples/tutorials/mesh_surgery.cxx	/^} Options;$/;"	t	typeref:struct:__anon2	file:
Ordering	include/sieve/Ordering.hh	/^  class Ordering {$/;"	c	namespace:ALE
OrientedConeSectionV	include/sieve/Sections.hh	/^    OrientedConeSectionV(const Obj<sieve_type>& sieve) : ParallelObject(sieve->comm(), sieve->debug()), _sieve(sieve) {$/;"	f	class:ALE::OrientedConeSectionV
OrientedConeSectionV	include/sieve/Sections.hh	/^  class OrientedConeSectionV : public ALE::ParallelObject {$/;"	c	namespace:ALE
OrientedConeVisitor	include/sieve/ISieve.hh	/^      OrientedConeVisitor(const Sieve& s, Visitor& v, bool useSource = false) : sieve(s), visitor(v), useSource(useSource) {};$/;"	f	class:ALE::ISieveVisitor::OrientedConeVisitor
OrientedConeVisitor	include/sieve/ISieve.hh	/^    class OrientedConeVisitor {$/;"	c	namespace:ALE::ISieveVisitor
OrientedPoint	include/sieve/ISieve.hh	/^    OrientedPoint(const int o) : std::pair<Point, int>(o, o) {};$/;"	f	class:ALE::OrientedPoint
OrientedPoint	include/sieve/ISieve.hh	/^  class OrientedPoint : public std::pair<Point, int> {$/;"	c	namespace:ALE
OutputMesh	src/dm/impls/mesh/examples/tutorials/ex1.c	/^PetscErrorCode OutputMesh(DM mesh, Options *options)$/;"	f
OutputMesh	src/dm/impls/mesh/examples/tutorials/ex_coarsen.h	/^PetscErrorCode OutputMesh(const Obj<ALE::Mesh>& mesh)$/;"	f
OutputOverlap	src/dm/impls/mesh/examples/tests/sieveTests.cxx	/^PetscErrorCode OutputOverlap(Obj<MeshT>& mesh, const Options *options)$/;"	f
OutputVTK	src/dm/impls/mesh/examples/tutorials/ex1.c	/^PetscErrorCode OutputVTK(DM mesh, Options *options)$/;"	f
OutputVTK	src/dm/impls/mesh/examples/tutorials/ex_coarsen.h	/^PetscErrorCode OutputVTK(const Obj<ALE::Mesh>& mesh, std::string filename, std::string field, bool cell)$/;"	f
Overlap	include/sieve/Overlap.hh	/^  Overlap(MPI_Comm comm, const int debug = 0) : ALE::ParallelObject(comm, debug) {$/;"	f	class:PETSc::Overlap
Overlap	include/sieve/Overlap.hh	/^class Overlap : public ALE::ParallelObject {$/;"	c	namespace:PETSc
OverlapBuilder	include/sieve/ParallelMapping.hh	/^  class OverlapBuilder {$/;"	c	namespace:ALE
OverlapSerializer	include/sieve/Overlap.hh	/^class OverlapSerializer {$/;"	c	namespace:PETSc
OverlapTest	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^    class OverlapTest {$/;"	c	namespace:ALE::Test
OverlapTests	src/dm/impls/mesh/examples/tests/sieveTests.cxx	/^PetscErrorCode OverlapTests(const Options *options)$/;"	f
P	include/petsc-private/dmdaimpl.h	/^  PetscInt              M,N,P;                 \/* array dimensions *\/$/;"	m	struct:__anon23
PARALLEL_BDDC	include/petscpc.h	/^typedef enum {SEQUENTIAL_BDDC,REPLICATED_BDDC,PARALLEL_BDDC,MULTILEVEL_BDDC} CoarseProblemType;$/;"	e	enum:__anon54
PC	bin/matlab/classes/matlabheader.h	/^typedef PetscPointer PC;$/;"	t
PC	include/finclude/petscpcdef.h	12;"	d
PC	include/petscpc.h	/^typedef struct _p_PC* PC;$/;"	t	typeref:struct:_p_PC
PCAINVCUSP	include/finclude/petscpcdef.h	75;"	d
PCAINVCUSP	include/petscpc.h	82;"	d
PCASA	include/finclude/petscpcdef.h	62;"	d
PCASA	include/petscpc.h	69;"	d
PCASM	include/finclude/petscpcdef.h	43;"	d
PCASM	include/petscpc.h	50;"	d
PCASMType	include/finclude/petscpcdef.h	15;"	d
PCASMType	include/petscpc.h	/^typedef enum {PC_ASM_BASIC = 3,PC_ASM_RESTRICT = 1,PC_ASM_INTERPOLATE = 2,PC_ASM_NONE = 0} PCASMType;$/;"	t	typeref:enum:__anon47
PCASMTypes	include/petscpc.h	/^PETSC_EXTERN const char *const PCASMTypes[];$/;"	v
PCBDDC	include/finclude/petscpcdef.h	76;"	d
PCBDDC	include/petscpc.h	83;"	d
PCBFBT	include/finclude/petscpcdef.h	64;"	d
PCBFBT	include/petscpc.h	71;"	d
PCBICGSTABCUSP	include/finclude/petscpcdef.h	74;"	d
PCBICGSTABCUSP	include/petscpc.h	81;"	d
PCBJACOBI	include/finclude/petscpcdef.h	38;"	d
PCBJACOBI	include/petscpc.h	45;"	d
PCCHOLESKY	include/finclude/petscpcdef.h	50;"	d
PCCHOLESKY	include/petscpc.h	57;"	d
PCCOMPOSITE	include/finclude/petscpcdef.h	46;"	d
PCCOMPOSITE	include/petscpc.h	53;"	d
PCCP	include/finclude/petscpcdef.h	63;"	d
PCCP	include/petscpc.h	70;"	d
PCCompositeType	include/finclude/petscpcdef.h	16;"	d
PCCompositeType	include/petscpc.h	/^typedef enum {PC_COMPOSITE_ADDITIVE,PC_COMPOSITE_MULTIPLICATIVE,PC_COMPOSITE_SYMMETRIC_MULTIPLICATIVE,PC_COMPOSITE_SPECIAL,PC_COMPOSITE_SCHUR} PCCompositeType;$/;"	t	typeref:enum:__anon49
PCCompositeTypes	include/petscpc.h	/^PETSC_EXTERN const char *const PCCompositeTypes[];$/;"	v
PCEISENSTAT	include/finclude/petscpcdef.h	40;"	d
PCEISENSTAT	include/petscpc.h	47;"	d
PCEXOTIC	include/finclude/petscpcdef.h	59;"	d
PCEXOTIC	include/petscpc.h	66;"	d
PCExoticType	include/finclude/petscpcdef.h	80;"	d
PCExoticType	include/petscpc.h	/^typedef enum { PC_EXOTIC_FACE,PC_EXOTIC_WIREBASKET } PCExoticType;$/;"	t	typeref:enum:__anon57
PCExoticTypes	include/petscpc.h	/^PETSC_EXTERN const char *const PCExoticTypes[];$/;"	v
PCFIELDSPLIT	include/finclude/petscpcdef.h	55;"	d
PCFIELDSPLIT	include/petscpc.h	62;"	d
PCFieldSplitSchurFactType	include/finclude/petscpcdef.h	22;"	d
PCFieldSplitSchurFactType	include/petscpc.h	/^} PCFieldSplitSchurFactType;$/;"	t	typeref:enum:__anon51
PCFieldSplitSchurFactTypes	include/petscpc.h	/^PETSC_EXTERN const char *const PCFieldSplitSchurFactTypes[];$/;"	v
PCFieldSplitSchurPreType	include/finclude/petscpcdef.h	19;"	d
PCFieldSplitSchurPreType	include/petscpc.h	/^typedef enum {PC_FIELDSPLIT_SCHUR_PRE_SELF,PC_FIELDSPLIT_SCHUR_PRE_A11,PC_FIELDSPLIT_SCHUR_PRE_USER} PCFieldSplitSchurPreType;$/;"	t	typeref:enum:__anon50
PCFieldSplitSchurPreTypes	include/petscpc.h	/^PETSC_EXTERN const char *const PCFieldSplitSchurPreTypes[];$/;"	v
PCGALERKIN	include/finclude/petscpcdef.h	58;"	d
PCGALERKIN	include/petscpc.h	65;"	d
PCGAMG	include/finclude/petscpcdef.h	71;"	d
PCGAMG	include/petscpc.h	78;"	d
PCGAMGAGG	include/finclude/petscpcdef.h	28;"	d
PCGAMGAGG	include/petscpc.h	431;"	d
PCGAMGGEO	include/finclude/petscpcdef.h	29;"	d
PCGAMGGEO	include/petscpc.h	432;"	d
PCGAMGType	include/finclude/petscpcdef.h	24;"	d
PCGAMGType	include/petscpc.h	/^typedef const char *PCGAMGType;$/;"	t
PCGASM	include/finclude/petscpcdef.h	44;"	d
PCGASM	include/petscpc.h	51;"	d
PCGASMType	include/petscpc.h	/^typedef enum {PC_GASM_BASIC = 3,PC_GASM_RESTRICT = 1,PC_GASM_INTERPOLATE = 2,PC_GASM_NONE = 0} PCGASMType;$/;"	t	typeref:enum:__anon48
PCGASMTypes	include/petscpc.h	/^PETSC_EXTERN const char *const PCGASMTypes[];$/;"	v
PCHMPI	include/finclude/petscpcdef.h	60;"	d
PCHMPI	include/petscpc.h	67;"	d
PCHYPRE	include/finclude/petscpcdef.h	53;"	d
PCHYPRE	include/petscpc.h	60;"	d
PCICC	include/finclude/petscpcdef.h	42;"	d
PCICC	include/petscpc.h	49;"	d
PCICE	include/petscdmmesh_formats.hh	/^  namespace PCICE {$/;"	n	namespace:ALE
PCICE	src/dm/impls/mesh/examples/tutorials/ex1.c	/^typedef enum {PCICE} FileType;$/;"	e	enum:__anon5	file:
PCICERenumberBoundary	src/dm/impls/mesh/meshpcice.c	/^PetscErrorCode  PCICERenumberBoundary(DM dm)$/;"	f
PCILU	include/finclude/petscpcdef.h	41;"	d
PCILU	include/petscpc.h	48;"	d
PCJACOBI	include/finclude/petscpcdef.h	34;"	d
PCJACOBI	include/petscpc.h	41;"	d
PCKSP	include/finclude/petscpcdef.h	45;"	d
PCKSP	include/petscpc.h	52;"	d
PCLSC	include/finclude/petscpcdef.h	65;"	d
PCLSC	include/petscpc.h	72;"	d
PCLU	include/finclude/petscpcdef.h	36;"	d
PCLU	include/petscpc.h	43;"	d
PCList	include/petscpc.h	/^PETSC_EXTERN PetscFunctionList PCList;$/;"	v
PCMAT	include/finclude/petscpcdef.h	52;"	d
PCMAT	include/petscpc.h	59;"	d
PCMG	include/finclude/petscpcdef.h	39;"	d
PCMG	include/petscpc.h	46;"	d
PCMGCycleType	include/finclude/petscpcdef.h	79;"	d
PCMGCycleType	include/petscpc.h	/^typedef enum { PC_MG_CYCLE_V = 1,PC_MG_CYCLE_W = 2 } PCMGCycleType;$/;"	t	typeref:enum:__anon56
PCMGCycleTypes	include/petscpc.h	/^PETSC_EXTERN const char *const PCMGCycleTypes[];$/;"	v
PCMGType	include/finclude/petscpcdef.h	78;"	d
PCMGType	include/petscpc.h	/^typedef enum { PC_MG_MULTIPLICATIVE,PC_MG_ADDITIVE,PC_MG_FULL,PC_MG_KASKADE } PCMGType;$/;"	t	typeref:enum:__anon55
PCMGTypes	include/petscpc.h	/^PETSC_EXTERN const char *const PCMGTypes[];$/;"	v
PCML	include/finclude/petscpcdef.h	57;"	d
PCML	include/petscpc.h	64;"	d
PCNN	include/finclude/petscpcdef.h	49;"	d
PCNN	include/petscpc.h	56;"	d
PCNONE	include/finclude/petscpcdef.h	33;"	d
PCNONE	include/petscpc.h	40;"	d
PCOps	include/petsc-private/pcimpl.h	/^typedef struct _PCOps *PCOps;$/;"	t	typeref:struct:_PCOps
PCPARMS	include/finclude/petscpcdef.h	54;"	d
PCPARMS	include/petscpc.h	61;"	d
PCPARMSGlobalType	include/finclude/petscpcdef.h	20;"	d
PCPARMSGlobalType	include/petscpc.h	/^typedef enum {PC_PARMS_GLOBAL_RAS,PC_PARMS_GLOBAL_SCHUR,PC_PARMS_GLOBAL_BJ} PCPARMSGlobalType;$/;"	t	typeref:enum:__anon52
PCPARMSGlobalTypes	include/petscpc.h	/^PETSC_EXTERN const char *const PCPARMSGlobalTypes[];$/;"	v
PCPARMSLocalType	include/finclude/petscpcdef.h	21;"	d
PCPARMSLocalType	include/petscpc.h	/^typedef enum {PC_PARMS_LOCAL_ILU0,PC_PARMS_LOCAL_ILUK,PC_PARMS_LOCAL_ILUT,PC_PARMS_LOCAL_ARMS} PCPARMSLocalType;$/;"	t	typeref:enum:__anon53
PCPARMSLocalTypes	include/petscpc.h	/^PETSC_EXTERN const char *const PCPARMSLocalTypes[];$/;"	v
PCPBJACOBI	include/finclude/petscpcdef.h	51;"	d
PCPBJACOBI	include/petscpc.h	58;"	d
PCPFMG	include/finclude/petscpcdef.h	67;"	d
PCPFMG	include/petscpc.h	74;"	d
PCPYTHON	include/finclude/petscpcdef.h	66;"	d
PCPYTHON	include/petscpc.h	73;"	d
PCREDISTRIBUTE	include/finclude/petscpcdef.h	69;"	d
PCREDISTRIBUTE	include/petscpc.h	76;"	d
PCREDUNDANT	include/finclude/petscpcdef.h	47;"	d
PCREDUNDANT	include/petscpc.h	54;"	d
PCRICHARDSON_CONVERGED_ATOL	include/petscpc.h	/^              PCRICHARDSON_CONVERGED_ATOL               =  3,$/;"	e	enum:__anon46
PCRICHARDSON_CONVERGED_ITS	include/petscpc.h	/^              PCRICHARDSON_CONVERGED_ITS                =  4,$/;"	e	enum:__anon46
PCRICHARDSON_CONVERGED_RTOL	include/petscpc.h	/^              PCRICHARDSON_CONVERGED_RTOL               =  2,$/;"	e	enum:__anon46
PCRICHARDSON_DIVERGED_DTOL	include/petscpc.h	/^              PCRICHARDSON_DIVERGED_DTOL                = -4} PCRichardsonConvergedReason;$/;"	e	enum:__anon46
PCRegisterAllCalled	include/petscpc.h	/^PETSC_EXTERN PetscBool PCRegisterAllCalled;$/;"	v
PCRichardsonConvergedReason	include/finclude/petscpcdef.h	17;"	d
PCRichardsonConvergedReason	include/petscpc.h	/^              PCRICHARDSON_DIVERGED_DTOL                = -4} PCRichardsonConvergedReason;$/;"	t	typeref:enum:__anon46
PCSACUSP	include/finclude/petscpcdef.h	72;"	d
PCSACUSP	include/petscpc.h	79;"	d
PCSACUSPPOLY	include/finclude/petscpcdef.h	73;"	d
PCSACUSPPOLY	include/petscpc.h	80;"	d
PCSHELL	include/finclude/petscpcdef.h	37;"	d
PCSHELL	include/petscpc.h	44;"	d
PCSOR	include/finclude/petscpcdef.h	35;"	d
PCSOR	include/petscpc.h	42;"	d
PCSPAI	include/finclude/petscpcdef.h	48;"	d
PCSPAI	include/petscpc.h	55;"	d
PCSUPPORTGRAPH	include/finclude/petscpcdef.h	61;"	d
PCSUPPORTGRAPH	include/petscpc.h	68;"	d
PCSVD	include/finclude/petscpcdef.h	70;"	d
PCSVD	include/petscpc.h	77;"	d
PCSYSPFMG	include/finclude/petscpcdef.h	68;"	d
PCSYSPFMG	include/petscpc.h	75;"	d
PCSide	include/finclude/petscpcdef.h	14;"	d
PCSide	include/petscpc.h	/^typedef enum { PC_SIDE_DEFAULT=-1,PC_LEFT,PC_RIGHT,PC_SYMMETRIC} PCSide;$/;"	t	typeref:enum:__anon45
PCSides	include/petscpc.h	/^PETSC_EXTERN const char *const *const PCSides;$/;"	v
PCTFS	include/finclude/petscpcdef.h	56;"	d
PCTFS	include/petscpc.h	63;"	d
PCType	include/finclude/petscpcdef.h	18;"	d
PCType	include/petscpc.h	/^typedef const char* PCType;$/;"	t
PC_ASM_BASIC	include/petscpc.h	/^typedef enum {PC_ASM_BASIC = 3,PC_ASM_RESTRICT = 1,PC_ASM_INTERPOLATE = 2,PC_ASM_NONE = 0} PCASMType;$/;"	e	enum:__anon47
PC_ASM_INTERPOLATE	include/petscpc.h	/^typedef enum {PC_ASM_BASIC = 3,PC_ASM_RESTRICT = 1,PC_ASM_INTERPOLATE = 2,PC_ASM_NONE = 0} PCASMType;$/;"	e	enum:__anon47
PC_ASM_NONE	include/petscpc.h	/^typedef enum {PC_ASM_BASIC = 3,PC_ASM_RESTRICT = 1,PC_ASM_INTERPOLATE = 2,PC_ASM_NONE = 0} PCASMType;$/;"	e	enum:__anon47
PC_ASM_RESTRICT	include/petscpc.h	/^typedef enum {PC_ASM_BASIC = 3,PC_ASM_RESTRICT = 1,PC_ASM_INTERPOLATE = 2,PC_ASM_NONE = 0} PCASMType;$/;"	e	enum:__anon47
PC_Apply	include/petsc-private/pcimpl.h	/^PETSC_EXTERN PetscLogEvent PC_SetUp, PC_SetUpOnBlocks, PC_Apply, PC_ApplyCoarse, PC_ApplyMultiple, PC_ApplySymmetricLeft;$/;"	v
PC_ApplyCoarse	include/petsc-private/pcimpl.h	/^PETSC_EXTERN PetscLogEvent PC_SetUp, PC_SetUpOnBlocks, PC_Apply, PC_ApplyCoarse, PC_ApplyMultiple, PC_ApplySymmetricLeft;$/;"	v
PC_ApplyMultiple	include/petsc-private/pcimpl.h	/^PETSC_EXTERN PetscLogEvent PC_SetUp, PC_SetUpOnBlocks, PC_Apply, PC_ApplyCoarse, PC_ApplyMultiple, PC_ApplySymmetricLeft;$/;"	v
PC_ApplyOnBlocks	include/petsc-private/pcimpl.h	/^PETSC_EXTERN PetscLogEvent PC_ApplySymmetricRight, PC_ModifySubMatrices, PC_ApplyOnBlocks, PC_ApplyTransposeOnBlocks, PC_ApplyOnMproc;$/;"	v
PC_ApplyOnMproc	include/petsc-private/pcimpl.h	/^PETSC_EXTERN PetscLogEvent PC_ApplySymmetricRight, PC_ModifySubMatrices, PC_ApplyOnBlocks, PC_ApplyTransposeOnBlocks, PC_ApplyOnMproc;$/;"	v
PC_ApplySymmetricLeft	include/petsc-private/pcimpl.h	/^PETSC_EXTERN PetscLogEvent PC_SetUp, PC_SetUpOnBlocks, PC_Apply, PC_ApplyCoarse, PC_ApplyMultiple, PC_ApplySymmetricLeft;$/;"	v
PC_ApplySymmetricRight	include/petsc-private/pcimpl.h	/^PETSC_EXTERN PetscLogEvent PC_ApplySymmetricRight, PC_ModifySubMatrices, PC_ApplyOnBlocks, PC_ApplyTransposeOnBlocks, PC_ApplyOnMproc;$/;"	v
PC_ApplyTransposeOnBlocks	include/petsc-private/pcimpl.h	/^PETSC_EXTERN PetscLogEvent PC_ApplySymmetricRight, PC_ModifySubMatrices, PC_ApplyOnBlocks, PC_ApplyTransposeOnBlocks, PC_ApplyOnMproc;$/;"	v
PC_CLASSID	include/petscpc.h	/^PETSC_EXTERN PetscClassId PC_CLASSID;$/;"	v
PC_COMPOSITE_ADDITIVE	include/petscpc.h	/^typedef enum {PC_COMPOSITE_ADDITIVE,PC_COMPOSITE_MULTIPLICATIVE,PC_COMPOSITE_SYMMETRIC_MULTIPLICATIVE,PC_COMPOSITE_SPECIAL,PC_COMPOSITE_SCHUR} PCCompositeType;$/;"	e	enum:__anon49
PC_COMPOSITE_MULTIPLICATIVE	include/petscpc.h	/^typedef enum {PC_COMPOSITE_ADDITIVE,PC_COMPOSITE_MULTIPLICATIVE,PC_COMPOSITE_SYMMETRIC_MULTIPLICATIVE,PC_COMPOSITE_SPECIAL,PC_COMPOSITE_SCHUR} PCCompositeType;$/;"	e	enum:__anon49
PC_COMPOSITE_SCHUR	include/petscpc.h	/^typedef enum {PC_COMPOSITE_ADDITIVE,PC_COMPOSITE_MULTIPLICATIVE,PC_COMPOSITE_SYMMETRIC_MULTIPLICATIVE,PC_COMPOSITE_SPECIAL,PC_COMPOSITE_SCHUR} PCCompositeType;$/;"	e	enum:__anon49
PC_COMPOSITE_SPECIAL	include/petscpc.h	/^typedef enum {PC_COMPOSITE_ADDITIVE,PC_COMPOSITE_MULTIPLICATIVE,PC_COMPOSITE_SYMMETRIC_MULTIPLICATIVE,PC_COMPOSITE_SPECIAL,PC_COMPOSITE_SCHUR} PCCompositeType;$/;"	e	enum:__anon49
PC_COMPOSITE_SYMMETRIC_MULTIPLICATIVE	include/petscpc.h	/^typedef enum {PC_COMPOSITE_ADDITIVE,PC_COMPOSITE_MULTIPLICATIVE,PC_COMPOSITE_SYMMETRIC_MULTIPLICATIVE,PC_COMPOSITE_SPECIAL,PC_COMPOSITE_SCHUR} PCCompositeType;$/;"	e	enum:__anon49
PC_EXOTIC_FACE	include/petscpc.h	/^typedef enum { PC_EXOTIC_FACE,PC_EXOTIC_WIREBASKET } PCExoticType;$/;"	e	enum:__anon57
PC_EXOTIC_WIREBASKET	include/petscpc.h	/^typedef enum { PC_EXOTIC_FACE,PC_EXOTIC_WIREBASKET } PCExoticType;$/;"	e	enum:__anon57
PC_FIELDSPLIT_SCHUR_FACT_DIAG	include/petscpc.h	/^  PC_FIELDSPLIT_SCHUR_FACT_DIAG,$/;"	e	enum:__anon51
PC_FIELDSPLIT_SCHUR_FACT_FULL	include/petscpc.h	/^  PC_FIELDSPLIT_SCHUR_FACT_FULL$/;"	e	enum:__anon51
PC_FIELDSPLIT_SCHUR_FACT_LOWER	include/petscpc.h	/^  PC_FIELDSPLIT_SCHUR_FACT_LOWER,$/;"	e	enum:__anon51
PC_FIELDSPLIT_SCHUR_FACT_UPPER	include/petscpc.h	/^  PC_FIELDSPLIT_SCHUR_FACT_UPPER,$/;"	e	enum:__anon51
PC_FIELDSPLIT_SCHUR_PRE_A11	include/petscpc.h	/^typedef enum {PC_FIELDSPLIT_SCHUR_PRE_SELF,PC_FIELDSPLIT_SCHUR_PRE_A11,PC_FIELDSPLIT_SCHUR_PRE_USER} PCFieldSplitSchurPreType;$/;"	e	enum:__anon50
PC_FIELDSPLIT_SCHUR_PRE_SELF	include/petscpc.h	/^typedef enum {PC_FIELDSPLIT_SCHUR_PRE_SELF,PC_FIELDSPLIT_SCHUR_PRE_A11,PC_FIELDSPLIT_SCHUR_PRE_USER} PCFieldSplitSchurPreType;$/;"	e	enum:__anon50
PC_FIELDSPLIT_SCHUR_PRE_USER	include/petscpc.h	/^typedef enum {PC_FIELDSPLIT_SCHUR_PRE_SELF,PC_FIELDSPLIT_SCHUR_PRE_A11,PC_FIELDSPLIT_SCHUR_PRE_USER} PCFieldSplitSchurPreType;$/;"	e	enum:__anon50
PC_FILE_CLASSID	include/petscpc.h	112;"	d
PC_GASM_BASIC	include/petscpc.h	/^typedef enum {PC_GASM_BASIC = 3,PC_GASM_RESTRICT = 1,PC_GASM_INTERPOLATE = 2,PC_GASM_NONE = 0} PCGASMType;$/;"	e	enum:__anon48
PC_GASM_INTERPOLATE	include/petscpc.h	/^typedef enum {PC_GASM_BASIC = 3,PC_GASM_RESTRICT = 1,PC_GASM_INTERPOLATE = 2,PC_GASM_NONE = 0} PCGASMType;$/;"	e	enum:__anon48
PC_GASM_NONE	include/petscpc.h	/^typedef enum {PC_GASM_BASIC = 3,PC_GASM_RESTRICT = 1,PC_GASM_INTERPOLATE = 2,PC_GASM_NONE = 0} PCGASMType;$/;"	e	enum:__anon48
PC_GASM_RESTRICT	include/petscpc.h	/^typedef enum {PC_GASM_BASIC = 3,PC_GASM_RESTRICT = 1,PC_GASM_INTERPOLATE = 2,PC_GASM_NONE = 0} PCGASMType;$/;"	e	enum:__anon48
PC_LEFT	include/petscpc.h	/^typedef enum { PC_SIDE_DEFAULT=-1,PC_LEFT,PC_RIGHT,PC_SYMMETRIC} PCSide;$/;"	e	enum:__anon45
PC_MG_ADDITIVE	include/petscpc.h	/^typedef enum { PC_MG_MULTIPLICATIVE,PC_MG_ADDITIVE,PC_MG_FULL,PC_MG_KASKADE } PCMGType;$/;"	e	enum:__anon55
PC_MG_CASCADE	include/petscpc.h	493;"	d
PC_MG_CYCLE_V	include/petscpc.h	/^typedef enum { PC_MG_CYCLE_V = 1,PC_MG_CYCLE_W = 2 } PCMGCycleType;$/;"	e	enum:__anon56
PC_MG_CYCLE_W	include/petscpc.h	/^typedef enum { PC_MG_CYCLE_V = 1,PC_MG_CYCLE_W = 2 } PCMGCycleType;$/;"	e	enum:__anon56
PC_MG_FULL	include/petscpc.h	/^typedef enum { PC_MG_MULTIPLICATIVE,PC_MG_ADDITIVE,PC_MG_FULL,PC_MG_KASKADE } PCMGType;$/;"	e	enum:__anon55
PC_MG_KASKADE	include/petscpc.h	/^typedef enum { PC_MG_MULTIPLICATIVE,PC_MG_ADDITIVE,PC_MG_FULL,PC_MG_KASKADE } PCMGType;$/;"	e	enum:__anon55
PC_MG_MULTIPLICATIVE	include/petscpc.h	/^typedef enum { PC_MG_MULTIPLICATIVE,PC_MG_ADDITIVE,PC_MG_FULL,PC_MG_KASKADE } PCMGType;$/;"	e	enum:__anon55
PC_ModifySubMatrices	include/petsc-private/pcimpl.h	/^PETSC_EXTERN PetscLogEvent PC_ApplySymmetricRight, PC_ModifySubMatrices, PC_ApplyOnBlocks, PC_ApplyTransposeOnBlocks, PC_ApplyOnMproc;$/;"	v
PC_PARMS_GLOBAL_BJ	include/petscpc.h	/^typedef enum {PC_PARMS_GLOBAL_RAS,PC_PARMS_GLOBAL_SCHUR,PC_PARMS_GLOBAL_BJ} PCPARMSGlobalType;$/;"	e	enum:__anon52
PC_PARMS_GLOBAL_RAS	include/petscpc.h	/^typedef enum {PC_PARMS_GLOBAL_RAS,PC_PARMS_GLOBAL_SCHUR,PC_PARMS_GLOBAL_BJ} PCPARMSGlobalType;$/;"	e	enum:__anon52
PC_PARMS_GLOBAL_SCHUR	include/petscpc.h	/^typedef enum {PC_PARMS_GLOBAL_RAS,PC_PARMS_GLOBAL_SCHUR,PC_PARMS_GLOBAL_BJ} PCPARMSGlobalType;$/;"	e	enum:__anon52
PC_PARMS_LOCAL_ARMS	include/petscpc.h	/^typedef enum {PC_PARMS_LOCAL_ILU0,PC_PARMS_LOCAL_ILUK,PC_PARMS_LOCAL_ILUT,PC_PARMS_LOCAL_ARMS} PCPARMSLocalType;$/;"	e	enum:__anon53
PC_PARMS_LOCAL_ILU0	include/petscpc.h	/^typedef enum {PC_PARMS_LOCAL_ILU0,PC_PARMS_LOCAL_ILUK,PC_PARMS_LOCAL_ILUT,PC_PARMS_LOCAL_ARMS} PCPARMSLocalType;$/;"	e	enum:__anon53
PC_PARMS_LOCAL_ILUK	include/petscpc.h	/^typedef enum {PC_PARMS_LOCAL_ILU0,PC_PARMS_LOCAL_ILUK,PC_PARMS_LOCAL_ILUT,PC_PARMS_LOCAL_ARMS} PCPARMSLocalType;$/;"	e	enum:__anon53
PC_PARMS_LOCAL_ILUT	include/petscpc.h	/^typedef enum {PC_PARMS_LOCAL_ILU0,PC_PARMS_LOCAL_ILUK,PC_PARMS_LOCAL_ILUT,PC_PARMS_LOCAL_ARMS} PCPARMSLocalType;$/;"	e	enum:__anon53
PC_RIGHT	include/petscpc.h	/^typedef enum { PC_SIDE_DEFAULT=-1,PC_LEFT,PC_RIGHT,PC_SYMMETRIC} PCSide;$/;"	e	enum:__anon45
PC_SIDE_DEFAULT	include/petscpc.h	/^typedef enum { PC_SIDE_DEFAULT=-1,PC_LEFT,PC_RIGHT,PC_SYMMETRIC} PCSide;$/;"	e	enum:__anon45
PC_SIDE_MAX	include/petscpc.h	97;"	d
PC_SYMMETRIC	include/petscpc.h	/^typedef enum { PC_SIDE_DEFAULT=-1,PC_LEFT,PC_RIGHT,PC_SYMMETRIC} PCSide;$/;"	e	enum:__anon45
PC_SetUp	include/petsc-private/pcimpl.h	/^PETSC_EXTERN PetscLogEvent PC_SetUp, PC_SetUpOnBlocks, PC_Apply, PC_ApplyCoarse, PC_ApplyMultiple, PC_ApplySymmetricLeft;$/;"	v
PC_SetUpOnBlocks	include/petsc-private/pcimpl.h	/^PETSC_EXTERN PetscLogEvent PC_SetUp, PC_SetUpOnBlocks, PC_Apply, PC_ApplyCoarse, PC_ApplyMultiple, PC_ApplySymmetricLeft;$/;"	v
PETSCDM_DLL	src/dm/impls/mesh/meshcreate.c	1;"	d	file:
PETSCFREEDHEADER	include/petsc-private/petscimpl.h	120;"	d
PETSCHEADER	include/petsc-private/petscimpl.h	116;"	d
PETSCNULLPOINTERADDRESS	include/petsc-private/fortranimpl.h	/^PETSC_EXTERN void  *PETSCNULLPOINTERADDRESS;$/;"	v
PETSCRAND	include/finclude/petscsys.h	234;"	d
PETSCRAND	include/petscsys.h	2106;"	d
PETSCRAND48	include/finclude/petscsys.h	235;"	d
PETSCRAND48	include/petscsys.h	2107;"	d
PETSCSFBASIC	include/petscsf.h	27;"	d
PETSCSFWINDOW	include/petscsf.h	28;"	d
PETSCSF_CLASSID	include/petscsf.h	/^PETSC_EXTERN PetscClassId PETSCSF_CLASSID;$/;"	v
PETSCSF_DUPLICATE_CONFONLY	include/petscsf.h	/^typedef enum {PETSCSF_DUPLICATE_CONFONLY,PETSCSF_DUPLICATE_RANKS,PETSCSF_DUPLICATE_GRAPH} PetscSFDuplicateOption;$/;"	e	enum:__anon8
PETSCSF_DUPLICATE_GRAPH	include/petscsf.h	/^typedef enum {PETSCSF_DUPLICATE_CONFONLY,PETSCSF_DUPLICATE_RANKS,PETSCSF_DUPLICATE_GRAPH} PetscSFDuplicateOption;$/;"	e	enum:__anon8
PETSCSF_DUPLICATE_RANKS	include/petscsf.h	/^typedef enum {PETSCSF_DUPLICATE_CONFONLY,PETSCSF_DUPLICATE_RANKS,PETSCSF_DUPLICATE_GRAPH} PetscSFDuplicateOption;$/;"	e	enum:__anon8
PETSCSF_WINDOW_SYNC_ACTIVE	include/petscsf.h	/^typedef enum {PETSCSF_WINDOW_SYNC_FENCE,PETSCSF_WINDOW_SYNC_LOCK,PETSCSF_WINDOW_SYNC_ACTIVE} PetscSFWindowSyncType;$/;"	e	enum:__anon7
PETSCSF_WINDOW_SYNC_FENCE	include/petscsf.h	/^typedef enum {PETSCSF_WINDOW_SYNC_FENCE,PETSCSF_WINDOW_SYNC_LOCK,PETSCSF_WINDOW_SYNC_ACTIVE} PetscSFWindowSyncType;$/;"	e	enum:__anon7
PETSCSF_WINDOW_SYNC_LOCK	include/petscsf.h	/^typedef enum {PETSCSF_WINDOW_SYNC_FENCE,PETSCSF_WINDOW_SYNC_LOCK,PETSCSF_WINDOW_SYNC_ACTIVE} PetscSFWindowSyncType;$/;"	e	enum:__anon7
PETSCSPRNG	include/finclude/petscsys.h	236;"	d
PETSCSPRNG	include/petscsys.h	2108;"	d
PETSCSTACKSIZE	include/petscerror.h	489;"	d
PETSCVIEWERAMS	include/finclude/petscviewerdef.h	27;"	d
PETSCVIEWERAMS	include/petscviewer.h	32;"	d
PETSCVIEWERASCII	include/finclude/petscviewerdef.h	17;"	d
PETSCVIEWERASCII	include/petscviewer.h	22;"	d
PETSCVIEWERBINARY	include/finclude/petscviewerdef.h	18;"	d
PETSCVIEWERBINARY	include/petscviewer.h	23;"	d
PETSCVIEWERDRAW	include/finclude/petscviewerdef.h	20;"	d
PETSCVIEWERDRAW	include/petscviewer.h	25;"	d
PETSCVIEWERHDF5	include/finclude/petscviewerdef.h	24;"	d
PETSCVIEWERHDF5	include/petscviewer.h	29;"	d
PETSCVIEWERMATHEMATICA	include/finclude/petscviewerdef.h	22;"	d
PETSCVIEWERMATHEMATICA	include/petscviewer.h	27;"	d
PETSCVIEWERMATLAB	include/finclude/petscviewerdef.h	26;"	d
PETSCVIEWERMATLAB	include/petscviewer.h	31;"	d
PETSCVIEWERNETCDF	include/finclude/petscviewerdef.h	23;"	d
PETSCVIEWERNETCDF	include/petscviewer.h	28;"	d
PETSCVIEWERSOCKET	include/finclude/petscviewerdef.h	16;"	d
PETSCVIEWERSOCKET	include/petscviewer.h	21;"	d
PETSCVIEWERSTRING	include/finclude/petscviewerdef.h	19;"	d
PETSCVIEWERSTRING	include/petscviewer.h	24;"	d
PETSCVIEWERVTK	include/finclude/petscviewerdef.h	25;"	d
PETSCVIEWERVTK	include/petscviewer.h	30;"	d
PETSCVIEWERVU	include/finclude/petscviewerdef.h	21;"	d
PETSCVIEWERVU	include/petscviewer.h	26;"	d
PETSC_ARCH	config/install.py	/^  PETSC_ARCH = a.split('=')[1][0:-1]$/;"	v
PETSC_ARCH	config/install.py	/^  PETSC_ARCH = os.environ['PETSC_ARCH']$/;"	v
PETSC_AUTHOR_INFO	include/petscsys.h	74;"	d
PETSC_BAG_FILE_CLASSID	include/petscbag.h	59;"	d
PETSC_BAG_HELP_LENGTH	include/petsc-private/bagimpl.h	6;"	d
PETSC_BAG_NAME_LENGTH	include/petsc-private/bagimpl.h	5;"	d
PETSC_BINARY_CHAR_SIZE	include/petscsys.h	2178;"	d
PETSC_BINARY_DOUBLE_SIZE	include/petscsys.h	2180;"	d
PETSC_BINARY_FLOAT_SIZE	include/petscsys.h	2177;"	d
PETSC_BINARY_INT_SIZE	include/petscsys.h	2176;"	d
PETSC_BINARY_SCALAR_SIZE	include/petscsys.h	2181;"	d
PETSC_BINARY_SEEK_CUR	include/petscsys.h	/^typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType;$/;"	e	enum:__anon29
PETSC_BINARY_SEEK_END	include/petscsys.h	/^typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType;$/;"	e	enum:__anon29
PETSC_BINARY_SEEK_SET	include/petscsys.h	/^typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType;$/;"	e	enum:__anon29
PETSC_BINARY_SHORT_SIZE	include/petscsys.h	2179;"	d
PETSC_BIT_LOGICAL	include/petscsys.h	/^              PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10,PETSC_OBJECT = 11, PETSC_FUNCTION = 12} PetscDataType;$/;"	e	enum:__anon26
PETSC_BLAS_INT_MAX	include/petscsys.h	1925;"	d
PETSC_BLAS_INT_MIN	include/petscsys.h	1926;"	d
PETSC_BOOL	include/petscsys.h	/^              PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10,PETSC_OBJECT = 11, PETSC_FUNCTION = 12} PetscDataType;$/;"	e	enum:__anon26
PETSC_BUILDTWOSIDED_ALLREDUCE	include/petscsys.h	/^  PETSC_BUILDTWOSIDED_ALLREDUCE = 0,$/;"	e	enum:__anon30
PETSC_BUILDTWOSIDED_IBARRIER	include/petscsys.h	/^  PETSC_BUILDTWOSIDED_IBARRIER = 1$/;"	e	enum:__anon30
PETSC_BUILDTWOSIDED_NOTSET	include/petscsys.h	/^  PETSC_BUILDTWOSIDED_NOTSET = -1,$/;"	e	enum:__anon30
PETSC_BUTTON_CENTER	include/petscdraw.h	/^typedef enum {PETSC_BUTTON_NONE,PETSC_BUTTON_LEFT,PETSC_BUTTON_CENTER,PETSC_BUTTON_RIGHT,PETSC_BUTTON_LEFT_SHIFT,PETSC_BUTTON_CENTER_SHIFT,PETSC_BUTTON_RIGHT_SHIFT} PetscDrawButton;$/;"	e	enum:__anon14
PETSC_BUTTON_CENTER_SHIFT	include/petscdraw.h	/^typedef enum {PETSC_BUTTON_NONE,PETSC_BUTTON_LEFT,PETSC_BUTTON_CENTER,PETSC_BUTTON_RIGHT,PETSC_BUTTON_LEFT_SHIFT,PETSC_BUTTON_CENTER_SHIFT,PETSC_BUTTON_RIGHT_SHIFT} PetscDrawButton;$/;"	e	enum:__anon14
PETSC_BUTTON_LEFT	include/petscdraw.h	/^typedef enum {PETSC_BUTTON_NONE,PETSC_BUTTON_LEFT,PETSC_BUTTON_CENTER,PETSC_BUTTON_RIGHT,PETSC_BUTTON_LEFT_SHIFT,PETSC_BUTTON_CENTER_SHIFT,PETSC_BUTTON_RIGHT_SHIFT} PetscDrawButton;$/;"	e	enum:__anon14
PETSC_BUTTON_LEFT_SHIFT	include/petscdraw.h	/^typedef enum {PETSC_BUTTON_NONE,PETSC_BUTTON_LEFT,PETSC_BUTTON_CENTER,PETSC_BUTTON_RIGHT,PETSC_BUTTON_LEFT_SHIFT,PETSC_BUTTON_CENTER_SHIFT,PETSC_BUTTON_RIGHT_SHIFT} PetscDrawButton;$/;"	e	enum:__anon14
PETSC_BUTTON_NONE	include/petscdraw.h	/^typedef enum {PETSC_BUTTON_NONE,PETSC_BUTTON_LEFT,PETSC_BUTTON_CENTER,PETSC_BUTTON_RIGHT,PETSC_BUTTON_LEFT_SHIFT,PETSC_BUTTON_CENTER_SHIFT,PETSC_BUTTON_RIGHT_SHIFT} PetscDrawButton;$/;"	e	enum:__anon14
PETSC_BUTTON_RIGHT	include/petscdraw.h	/^typedef enum {PETSC_BUTTON_NONE,PETSC_BUTTON_LEFT,PETSC_BUTTON_CENTER,PETSC_BUTTON_RIGHT,PETSC_BUTTON_LEFT_SHIFT,PETSC_BUTTON_CENTER_SHIFT,PETSC_BUTTON_RIGHT_SHIFT} PetscDrawButton;$/;"	e	enum:__anon14
PETSC_BUTTON_RIGHT_SHIFT	include/petscdraw.h	/^typedef enum {PETSC_BUTTON_NONE,PETSC_BUTTON_LEFT,PETSC_BUTTON_CENTER,PETSC_BUTTON_RIGHT,PETSC_BUTTON_LEFT_SHIFT,PETSC_BUTTON_CENTER_SHIFT,PETSC_BUTTON_RIGHT_SHIFT} PetscDrawButton;$/;"	e	enum:__anon14
PETSC_CHAR	include/petscsys.h	/^              PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10,PETSC_OBJECT = 11, PETSC_FUNCTION = 12} PetscDataType;$/;"	e	enum:__anon26
PETSC_COMM_LOCAL_WORLD	include/petscsys.h	/^PETSC_EXTERN MPI_Comm PETSC_COMM_LOCAL_WORLD;$/;"	v
PETSC_COMM_SELF	include/petscsys.h	468;"	d
PETSC_COMM_WORLD	include/petscsys.h	/^PETSC_EXTERN MPI_Comm PETSC_COMM_WORLD;$/;"	v
PETSC_COMPLEX	include/petscsys.h	/^typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,$/;"	e	enum:__anon26
PETSC_CONTAINER_CLASSID	include/petscsys.h	/^PETSC_EXTERN PetscClassId PETSC_CONTAINER_CLASSID;$/;"	v
PETSC_COPY_VALUES	include/petscsys.h	/^typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode;$/;"	e	enum:__anon25
PETSC_CUSP_BOTH	include/petsc-private/petscimpl.h	/^typedef enum {PETSC_CUSP_UNALLOCATED,PETSC_CUSP_GPU,PETSC_CUSP_CPU,PETSC_CUSP_BOTH} PetscCUSPFlag;$/;"	e	enum:__anon15
PETSC_CUSP_CPU	include/petsc-private/petscimpl.h	/^typedef enum {PETSC_CUSP_UNALLOCATED,PETSC_CUSP_GPU,PETSC_CUSP_CPU,PETSC_CUSP_BOTH} PetscCUSPFlag;$/;"	e	enum:__anon15
PETSC_CUSP_GPU	include/petsc-private/petscimpl.h	/^typedef enum {PETSC_CUSP_UNALLOCATED,PETSC_CUSP_GPU,PETSC_CUSP_CPU,PETSC_CUSP_BOTH} PetscCUSPFlag;$/;"	e	enum:__anon15
PETSC_CUSP_UNALLOCATED	include/petsc-private/petscimpl.h	/^typedef enum {PETSC_CUSP_UNALLOCATED,PETSC_CUSP_GPU,PETSC_CUSP_CPU,PETSC_CUSP_BOTH} PetscCUSPFlag;$/;"	e	enum:__anon15
PETSC_DECIDE	include/finclude/petscsys.h	/^      PetscInt   PETSC_DECIDE,PETSC_DETERMINE$/;"	v
PETSC_DECIDE	include/petscsys.h	414;"	d
PETSC_DEFAULT	include/petscsys.h	442;"	d
PETSC_DETERMINE	include/petscsys.h	429;"	d
PETSC_DIR	config/install.py	/^  PETSC_DIR = a.split('=')[1][0:-1]$/;"	v
PETSC_DIR	config/install.py	/^  PETSC_DIR = os.environ['PETSC_DIR']$/;"	v
PETSC_DLLEXPORT	include/petscsys.h	44;"	d
PETSC_DLLEXPORT	include/petscsys.h	48;"	d
PETSC_DLLEXPORT	include/petscsys.h	52;"	d
PETSC_DLLIMPORT	include/petscsys.h	45;"	d
PETSC_DLLIMPORT	include/petscsys.h	49;"	d
PETSC_DLLIMPORT	include/petscsys.h	53;"	d
PETSC_DL_DECIDE	include/petscsys.h	/^typedef enum {PETSC_DL_DECIDE=0,PETSC_DL_NOW=1,PETSC_DL_LOCAL=2} PetscDLMode;$/;"	e	enum:__anon28
PETSC_DL_LOCAL	include/petscsys.h	/^typedef enum {PETSC_DL_DECIDE=0,PETSC_DL_NOW=1,PETSC_DL_LOCAL=2} PetscDLMode;$/;"	e	enum:__anon28
PETSC_DL_NOW	include/petscsys.h	/^typedef enum {PETSC_DL_DECIDE=0,PETSC_DL_NOW=1,PETSC_DL_LOCAL=2} PetscDLMode;$/;"	e	enum:__anon28
PETSC_DOUBLE	include/petscsys.h	/^typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,$/;"	e	enum:__anon26
PETSC_DRAWAXIS_CLASSID	include/petscdraw.h	/^PETSC_EXTERN PetscClassId PETSC_DRAWAXIS_CLASSID;$/;"	v
PETSC_DRAWHG_CLASSID	include/petscdraw.h	/^PETSC_EXTERN PetscClassId PETSC_DRAWHG_CLASSID;$/;"	v
PETSC_DRAWLG_CLASSID	include/petscdraw.h	/^PETSC_EXTERN PetscClassId PETSC_DRAWLG_CLASSID;$/;"	v
PETSC_DRAWSP_CLASSID	include/petscdraw.h	/^PETSC_EXTERN PetscClassId PETSC_DRAWSP_CLASSID;$/;"	v
PETSC_DRAW_AQUAMARINE	include/petscdraw.h	51;"	d
PETSC_DRAW_BASIC_COLORS	include/petscdraw.h	41;"	d
PETSC_DRAW_BLACK	include/petscdraw.h	45;"	d
PETSC_DRAW_BLUE	include/petscdraw.h	49;"	d
PETSC_DRAW_BROWN	include/petscdraw.h	55;"	d
PETSC_DRAW_CADETBLUE	include/petscdraw.h	71;"	d
PETSC_DRAW_CLASSID	include/petscdraw.h	/^PETSC_EXTERN PetscClassId PETSC_DRAW_CLASSID;$/;"	v
PETSC_DRAW_CORAL	include/petscdraw.h	57;"	d
PETSC_DRAW_CYAN	include/petscdraw.h	48;"	d
PETSC_DRAW_DARKGREEN	include/petscdraw.h	68;"	d
PETSC_DRAW_DEEPPINK	include/petscdraw.h	73;"	d
PETSC_DRAW_DIMGRAY	include/petscdraw.h	65;"	d
PETSC_DRAW_FORESTGREEN	include/petscdraw.h	52;"	d
PETSC_DRAW_FULL_SIZE	include/petscdraw.h	82;"	d
PETSC_DRAW_GLUT	include/petscdraw.h	20;"	d
PETSC_DRAW_GOLD	include/petscdraw.h	61;"	d
PETSC_DRAW_GRAY	include/petscdraw.h	58;"	d
PETSC_DRAW_GREEN	include/petscdraw.h	47;"	d
PETSC_DRAW_HALF_SIZE	include/petscdraw.h	83;"	d
PETSC_DRAW_KHAKI	include/petscdraw.h	64;"	d
PETSC_DRAW_LAVENDERBLUSH	include/petscdraw.h	76;"	d
PETSC_DRAW_LIGHTPINK	include/petscdraw.h	62;"	d
PETSC_DRAW_LIMEGREEN	include/petscdraw.h	75;"	d
PETSC_DRAW_MAGENTA	include/petscdraw.h	50;"	d
PETSC_DRAW_MEDIUMTURQUOISE	include/petscdraw.h	63;"	d
PETSC_DRAW_NAVYBLUE	include/petscdraw.h	69;"	d
PETSC_DRAW_NULL	include/finclude/petscdrawdef.h	22;"	d
PETSC_DRAW_NULL	include/petscdraw.h	22;"	d
PETSC_DRAW_OPENGLES	include/petscdraw.h	21;"	d
PETSC_DRAW_ORANGE	include/petscdraw.h	53;"	d
PETSC_DRAW_PINK	include/petscdraw.h	56;"	d
PETSC_DRAW_PLUM	include/petscdraw.h	77;"	d
PETSC_DRAW_POWDERBLUE	include/petscdraw.h	72;"	d
PETSC_DRAW_PS	include/finclude/petscdrawdef.h	23;"	d
PETSC_DRAW_QUARTER_SIZE	include/petscdraw.h	85;"	d
PETSC_DRAW_RED	include/petscdraw.h	46;"	d
PETSC_DRAW_ROTATE	include/petscdraw.h	43;"	d
PETSC_DRAW_SANDYBROWN	include/petscdraw.h	70;"	d
PETSC_DRAW_SKYBLUE	include/petscdraw.h	67;"	d
PETSC_DRAW_THIRD_SIZE	include/petscdraw.h	84;"	d
PETSC_DRAW_THISTLE	include/petscdraw.h	74;"	d
PETSC_DRAW_TIKZ	include/petscdraw.h	24;"	d
PETSC_DRAW_VIOLET	include/petscdraw.h	54;"	d
PETSC_DRAW_WHITE	include/petscdraw.h	44;"	d
PETSC_DRAW_WIN32	include/finclude/petscdrawdef.h	24;"	d
PETSC_DRAW_WIN32	include/petscdraw.h	23;"	d
PETSC_DRAW_X	include/finclude/petscdrawdef.h	21;"	d
PETSC_DRAW_X	include/petscdraw.h	19;"	d
PETSC_DRAW_YELLOW	include/petscdraw.h	59;"	d
PETSC_DRAW_YELLOWGREEN	include/petscdraw.h	66;"	d
PETSC_END_LEN	include/petsc-private/fortranimpl.h	40;"	d
PETSC_END_LEN	include/petsc-private/fortranimpl.h	47;"	d
PETSC_END_LEN	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  alestagepush_(CHAR name PETSC_MIXED_LEN(lenN), PetscInt *debug, int *ierr PETSC_END_LEN(lenN))$/;"	f
PETSC_END_LEN_CALL	include/petsc-private/fortranimpl.h	42;"	d
PETSC_END_LEN_CALL	include/petsc-private/fortranimpl.h	49;"	d
PETSC_END_LEN_PROTO	include/petsc-private/fortranimpl.h	44;"	d
PETSC_END_LEN_PROTO	include/petsc-private/fortranimpl.h	51;"	d
PETSC_ENUM	include/petscsys.h	/^              PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10,PETSC_OBJECT = 11, PETSC_FUNCTION = 12} PetscDataType;$/;"	e	enum:__anon26
PETSC_ERROR_INITIAL	include/petscerror.h	/^typedef enum {PETSC_ERROR_INITIAL=0,PETSC_ERROR_REPEAT=1,PETSC_ERROR_IN_CXX = 2} PetscErrorType;$/;"	e	enum:__anon11
PETSC_ERROR_IN_CXX	include/petscerror.h	/^typedef enum {PETSC_ERROR_INITIAL=0,PETSC_ERROR_REPEAT=1,PETSC_ERROR_IN_CXX = 2} PetscErrorType;$/;"	e	enum:__anon11
PETSC_ERROR_REPEAT	include/petscerror.h	/^typedef enum {PETSC_ERROR_INITIAL=0,PETSC_ERROR_REPEAT=1,PETSC_ERROR_IN_CXX = 2} PetscErrorType;$/;"	e	enum:__anon11
PETSC_ERR_ARG_BADPTR	include/finclude/petscerrordef.h	27;"	d
PETSC_ERR_ARG_BADPTR	include/petscerror.h	58;"	d
PETSC_ERR_ARG_CORRUPT	include/finclude/petscerrordef.h	25;"	d
PETSC_ERR_ARG_CORRUPT	include/petscerror.h	56;"	d
PETSC_ERR_ARG_IDN	include/finclude/petscerrordef.h	23;"	d
PETSC_ERR_ARG_IDN	include/petscerror.h	54;"	d
PETSC_ERR_ARG_INCOMP	include/finclude/petscerrordef.h	31;"	d
PETSC_ERR_ARG_INCOMP	include/petscerror.h	63;"	d
PETSC_ERR_ARG_NOTSAMECOMM	include/finclude/petscerrordef.h	29;"	d
PETSC_ERR_ARG_NOTSAMECOMM	include/petscerror.h	60;"	d
PETSC_ERR_ARG_NOTSAMETYPE	include/finclude/petscerrordef.h	28;"	d
PETSC_ERR_ARG_NOTSAMETYPE	include/petscerror.h	59;"	d
PETSC_ERR_ARG_NULL	include/finclude/petscerrordef.h	32;"	d
PETSC_ERR_ARG_NULL	include/petscerror.h	64;"	d
PETSC_ERR_ARG_OUTOFRANGE	include/finclude/petscerrordef.h	26;"	d
PETSC_ERR_ARG_OUTOFRANGE	include/petscerror.h	57;"	d
PETSC_ERR_ARG_SIZ	include/finclude/petscerrordef.h	22;"	d
PETSC_ERR_ARG_SIZ	include/petscerror.h	53;"	d
PETSC_ERR_ARG_TYPENOTSET	include/petscerror.h	62;"	d
PETSC_ERR_ARG_UNKNOWN_TYPE	include/finclude/petscerrordef.h	33;"	d
PETSC_ERR_ARG_UNKNOWN_TYPE	include/petscerror.h	65;"	d
PETSC_ERR_ARG_WRONG	include/finclude/petscerrordef.h	24;"	d
PETSC_ERR_ARG_WRONG	include/petscerror.h	55;"	d
PETSC_ERR_ARG_WRONGSTATE	include/finclude/petscerrordef.h	30;"	d
PETSC_ERR_ARG_WRONGSTATE	include/petscerror.h	61;"	d
PETSC_ERR_CONV_FAILED	include/finclude/petscerrordef.h	19;"	d
PETSC_ERR_CONV_FAILED	include/petscerror.h	48;"	d
PETSC_ERR_COR	include/finclude/petscerrordef.h	15;"	d
PETSC_ERR_COR	include/petscerror.h	44;"	d
PETSC_ERR_FILE_OPEN	include/finclude/petscerrordef.h	35;"	d
PETSC_ERR_FILE_OPEN	include/petscerror.h	67;"	d
PETSC_ERR_FILE_READ	include/finclude/petscerrordef.h	36;"	d
PETSC_ERR_FILE_READ	include/petscerror.h	68;"	d
PETSC_ERR_FILE_UNEXPECTED	include/finclude/petscerrordef.h	38;"	d
PETSC_ERR_FILE_UNEXPECTED	include/petscerror.h	70;"	d
PETSC_ERR_FILE_WRITE	include/finclude/petscerrordef.h	37;"	d
PETSC_ERR_FILE_WRITE	include/petscerror.h	69;"	d
PETSC_ERR_FLOP_COUNT	include/petscerror.h	77;"	d
PETSC_ERR_FP	include/finclude/petscerrordef.h	14;"	d
PETSC_ERR_FP	include/petscerror.h	43;"	d
PETSC_ERR_INT_OVERFLOW	include/petscerror.h	75;"	d
PETSC_ERR_LIB	include/finclude/petscerrordef.h	16;"	d
PETSC_ERR_LIB	include/petscerror.h	45;"	d
PETSC_ERR_MAT_CH_ZRPVT	include/finclude/petscerrordef.h	41;"	d
PETSC_ERR_MAT_CH_ZRPVT	include/petscerror.h	73;"	d
PETSC_ERR_MAT_LU_ZRPVT	include/finclude/petscerrordef.h	40;"	d
PETSC_ERR_MAT_LU_ZRPVT	include/petscerror.h	72;"	d
PETSC_ERR_MAX_VALUE	include/petscerror.h	79;"	d
PETSC_ERR_MEM	include/finclude/petscerrordef.h	9;"	d
PETSC_ERR_MEM	include/petscerror.h	38;"	d
PETSC_ERR_MEMC	include/finclude/petscerrordef.h	18;"	d
PETSC_ERR_MEMC	include/petscerror.h	47;"	d
PETSC_ERR_MIN_VALUE	include/petscerror.h	36;"	d
PETSC_ERR_NOT_CONVERGED	include/petscerror.h	78;"	d
PETSC_ERR_ORDER	include/finclude/petscerrordef.h	12;"	d
PETSC_ERR_ORDER	include/petscerror.h	41;"	d
PETSC_ERR_PLIB	include/finclude/petscerrordef.h	17;"	d
PETSC_ERR_PLIB	include/petscerror.h	46;"	d
PETSC_ERR_POINTER	include/petscerror.h	51;"	d
PETSC_ERR_SIG	include/finclude/petscerrordef.h	13;"	d
PETSC_ERR_SIG	include/petscerror.h	42;"	d
PETSC_ERR_SUP	include/finclude/petscerrordef.h	10;"	d
PETSC_ERR_SUP	include/petscerror.h	39;"	d
PETSC_ERR_SUP_SYS	include/finclude/petscerrordef.h	11;"	d
PETSC_ERR_SUP_SYS	include/petscerror.h	40;"	d
PETSC_ERR_SYS	include/petscerror.h	50;"	d
PETSC_ERR_USER	include/finclude/petscerrordef.h	20;"	d
PETSC_ERR_USER	include/petscerror.h	49;"	d
PETSC_EVENT	include/petsclog.h	28;"	d
PETSC_EXTERN	include/petscsys.h	64;"	d
PETSC_EXTERN	include/petscsys.h	68;"	d
PETSC_EXTERN_TYPEDEF	include/petscsys.h	65;"	d
PETSC_EXTERN_TYPEDEF	include/petscsys.h	69;"	d
PETSC_FALSE	include/petscsys.h	/^typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool;$/;"	e	enum:__anon24
PETSC_FLOAT	include/petscsys.h	/^typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,$/;"	e	enum:__anon26
PETSC_FLOPS_PER_OP	include/petsclog.h	193;"	d
PETSC_FLOPS_PER_OP	include/petsclog.h	195;"	d
PETSC_FORTRANADDR	include/finclude/petscsys.h	94;"	d
PETSC_FORTRANADDR	include/petscsys.h	1119;"	d
PETSC_FORTRAN_CALLBACK_CLASS	include/petsc-private/petscimpl.h	/^typedef enum {PETSC_FORTRAN_CALLBACK_CLASS,PETSC_FORTRAN_CALLBACK_SUBTYPE,PETSC_FORTRAN_CALLBACK_MAXTYPE} PetscFortranCallbackType;$/;"	e	enum:__anon12
PETSC_FORTRAN_CALLBACK_MAXTYPE	include/petsc-private/petscimpl.h	/^typedef enum {PETSC_FORTRAN_CALLBACK_CLASS,PETSC_FORTRAN_CALLBACK_SUBTYPE,PETSC_FORTRAN_CALLBACK_MAXTYPE} PetscFortranCallbackType;$/;"	e	enum:__anon12
PETSC_FORTRAN_CALLBACK_SUBTYPE	include/petsc-private/petscimpl.h	/^typedef enum {PETSC_FORTRAN_CALLBACK_CLASS,PETSC_FORTRAN_CALLBACK_SUBTYPE,PETSC_FORTRAN_CALLBACK_MAXTYPE} PetscFortranCallbackType;$/;"	e	enum:__anon12
PETSC_FPT_HASH_FACT	include/petsc-private/petscfptimpl.h	79;"	d
PETSC_FP_TRAP_OFF	include/petscerror.h	/^typedef enum {PETSC_FP_TRAP_OFF=0,PETSC_FP_TRAP_ON=1} PetscFPTrap;$/;"	e	enum:__anon12
PETSC_FP_TRAP_ON	include/petscerror.h	/^typedef enum {PETSC_FP_TRAP_OFF=0,PETSC_FP_TRAP_ON=1} PetscFPTrap;$/;"	e	enum:__anon12
PETSC_FUNCTION	include/petscsys.h	/^              PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10,PETSC_OBJECT = 11, PETSC_FUNCTION = 12} PetscDataType;$/;"	e	enum:__anon26
PETSC_FUNCTION_NAME	include/petscsys.h	38;"	d
PETSC_FUNCTION_NAME	include/petscsys.h	40;"	d
PETSC_HASH_FACT	include/petscctable.h	21;"	d
PETSC_HAVE_COMPLEX	include/petscmath.h	101;"	d
PETSC_HAVE_COMPLEX	include/petscmath.h	67;"	d
PETSC_HDF5_INT_MAX	include/petscviewerhdf5.h	14;"	d
PETSC_HDF5_INT_MIN	include/petscviewerhdf5.h	15;"	d
PETSC_IGNORE	include/petscsys.h	403;"	d
PETSC_INT	include/petscsys.h	/^typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,$/;"	e	enum:__anon26
PETSC_INTERN	include/petscsys.h	66;"	d
PETSC_INTERN	include/petscsys.h	70;"	d
PETSC_KERNEL_NARGS_MAX	include/petsc-private/threadcommimpl.h	24;"	d
PETSC_LARGEST_CLASSID	include/petscsys.h	/^PETSC_EXTERN PetscClassId PETSC_LARGEST_CLASSID;$/;"	v
PETSC_LARGEST_EVENT	include/petsclog.h	/^PETSC_EXTERN PetscLogEvent PETSC_LARGEST_EVENT;$/;"	v
PETSC_LONG	include/petscsys.h	/^typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,$/;"	e	enum:__anon26
PETSC_MACHINE_EPSILON	include/petscmath.h	394;"	d
PETSC_MACHINE_EPSILON	include/petscmath.h	400;"	d
PETSC_MACHINE_EPSILON	include/petscmath.h	406;"	d
PETSC_MATLAB_ENGINE_SELF	include/petscmatlab.h	46;"	d
PETSC_MATLAB_ENGINE_WORLD	include/petscmatlab.h	39;"	d
PETSC_MAX_INT	include/petscmath.h	384;"	d
PETSC_MAX_INT	include/petscmath.h	387;"	d
PETSC_MAX_OPTIONS_HANDLER	include/petsc-private/petscimpl.h	64;"	d
PETSC_MAX_PATH_LEN	include/petscsys.h	1973;"	d
PETSC_MAX_PATH_LEN	include/petscsys.h	1975;"	d
PETSC_MAX_PATH_LEN	include/petscsys.h	1977;"	d
PETSC_MAX_PATH_LEN	include/petscsys.h	1979;"	d
PETSC_MAX_REAL	include/petscmath.h	392;"	d
PETSC_MAX_REAL	include/petscmath.h	398;"	d
PETSC_MAX_REAL	include/petscmath.h	404;"	d
PETSC_MIN_INT	include/petscmath.h	385;"	d
PETSC_MIN_INT	include/petscmath.h	388;"	d
PETSC_MIN_REAL	include/petscmath.h	393;"	d
PETSC_MIN_REAL	include/petscmath.h	399;"	d
PETSC_MIN_REAL	include/petscmath.h	405;"	d
PETSC_MIXED_LEN	include/petsc-private/fortranimpl.h	39;"	d
PETSC_MIXED_LEN	include/petsc-private/fortranimpl.h	46;"	d
PETSC_MIXED_LEN_CALL	include/petsc-private/fortranimpl.h	41;"	d
PETSC_MIXED_LEN_CALL	include/petsc-private/fortranimpl.h	48;"	d
PETSC_MIXED_LEN_PROTO	include/petsc-private/fortranimpl.h	43;"	d
PETSC_MIXED_LEN_PROTO	include/petsc-private/fortranimpl.h	50;"	d
PETSC_MPI_INT_MAX	include/petscsys.h	1922;"	d
PETSC_MPI_INT_MIN	include/petscsys.h	1923;"	d
PETSC_NULL	include/petscsys.h	387;"	d
PETSC_NULL_BOOL_Fortran	include/petsc-private/fortranimpl.h	/^PETSC_EXTERN void    *PETSC_NULL_BOOL_Fortran;$/;"	v
PETSC_NULL_CHARACTER_Fortran	include/petsc-private/fortranimpl.h	/^PETSC_EXTERN char   *PETSC_NULL_CHARACTER_Fortran;$/;"	v
PETSC_NULL_DOUBLE_Fortran	include/petsc-private/fortranimpl.h	/^PETSC_EXTERN void    *PETSC_NULL_DOUBLE_Fortran;$/;"	v
PETSC_NULL_FUNCTION_Fortran	include/petsc-private/fortranimpl.h	/^PETSC_EXTERN void (*PETSC_NULL_FUNCTION_Fortran)(void);$/;"	v
PETSC_NULL_INTEGER_Fortran	include/petsc-private/fortranimpl.h	/^PETSC_EXTERN void    *PETSC_NULL_INTEGER_Fortran;$/;"	v
PETSC_NULL_OBJECT_Fortran	include/petsc-private/fortranimpl.h	/^PETSC_EXTERN void    *PETSC_NULL_OBJECT_Fortran;$/;"	v
PETSC_NULL_REAL_Fortran	include/petsc-private/fortranimpl.h	/^PETSC_EXTERN void    *PETSC_NULL_REAL_Fortran;$/;"	v
PETSC_NULL_SCALAR_Fortran	include/petsc-private/fortranimpl.h	/^PETSC_EXTERN void    *PETSC_NULL_SCALAR_Fortran;$/;"	v
PETSC_OBJECT	include/petscsys.h	/^              PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10,PETSC_OBJECT = 11, PETSC_FUNCTION = 12} PetscDataType;$/;"	e	enum:__anon26
PETSC_OBJECT_CLASSID	include/petscsys.h	/^PETSC_EXTERN PetscClassId PETSC_OBJECT_CLASSID;$/;"	v
PETSC_OWN_POINTER	include/petscsys.h	/^typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode;$/;"	e	enum:__anon25
PETSC_PI	include/petscmath.h	376;"	d
PETSC_PI	include/petscmath.h	378;"	d
PETSC_PI	include/petscmath.h	380;"	d
PETSC_PRECISION_DOUBLE	include/petscsys.h	/^typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision;$/;"	e	enum:__anon23
PETSC_PRECISION_SINGLE	include/petscsys.h	/^typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision;$/;"	e	enum:__anon23
PETSC_RANDOM_CLASSID	include/petscsys.h	/^PETSC_EXTERN PetscClassId PETSC_RANDOM_CLASSID;$/;"	v
PETSC_REAL	include/finclude/petscsys.h	88;"	d
PETSC_REAL	include/finclude/petscsysdef.h	121;"	d
PETSC_REAL	include/petscsys.h	1113;"	d
PETSC_REAL	include/petscsys.h	1115;"	d
PETSC_REAL	include/petscsys.h	1117;"	d
PETSC_REDUCTIONS_MAX	include/petscthreadcomm.h	38;"	d
PETSC_RELEASE_DATE	include/petscversion.h	9;"	d
PETSC_RUNNING_ON_VALGRIND	include/petscsys.h	1460;"	d
PETSC_RUNNING_ON_VALGRIND	include/petscsys.h	1462;"	d
PETSC_SCALAR	include/finclude/petscsysdef.h	110;"	d
PETSC_SCALAR	include/petscsys.h	1102;"	d
PETSC_SCALAR	include/petscsys.h	1105;"	d
PETSC_SCALAR	include/petscsys.h	1107;"	d
PETSC_SCALAR	include/petscsys.h	1109;"	d
PETSC_SCALAR_DOUBLE	include/petscmath.h	/^typedef enum { PETSC_SCALAR_DOUBLE,PETSC_SCALAR_SINGLE, PETSC_SCALAR_LONG_DOUBLE } PetscScalarPrecision;$/;"	e	enum:__anon60
PETSC_SCALAR_LONG_DOUBLE	include/petscmath.h	/^typedef enum { PETSC_SCALAR_DOUBLE,PETSC_SCALAR_SINGLE, PETSC_SCALAR_LONG_DOUBLE } PetscScalarPrecision;$/;"	e	enum:__anon60
PETSC_SCALAR_SINGLE	include/petscmath.h	/^typedef enum { PETSC_SCALAR_DOUBLE,PETSC_SCALAR_SINGLE, PETSC_SCALAR_LONG_DOUBLE } PetscScalarPrecision;$/;"	e	enum:__anon60
PETSC_SECTION_CLASSID	include/petscis.h	/^PETSC_EXTERN PetscClassId PETSC_SECTION_CLASSID;$/;"	v
PETSC_SHORT	include/petscsys.h	/^typedef enum {PETSC_INT = 0,PETSC_DOUBLE = 1,PETSC_COMPLEX = 2, PETSC_LONG = 3 ,PETSC_SHORT = 4,PETSC_FLOAT = 5,$/;"	e	enum:__anon26
PETSC_SMALL	include/petscmath.h	396;"	d
PETSC_SMALL	include/petscmath.h	402;"	d
PETSC_SMALL	include/petscmath.h	408;"	d
PETSC_SMALLEST_CLASSID	include/petscsys.h	1243;"	d
PETSC_SMALLEST_FORTRAN_CALLBACK	include/petsc-private/petscimpl.h	49;"	d
PETSC_SQRT_MACHINE_EPSILON	include/petscmath.h	395;"	d
PETSC_SQRT_MACHINE_EPSILON	include/petscmath.h	401;"	d
PETSC_SQRT_MACHINE_EPSILON	include/petscmath.h	407;"	d
PETSC_STDCALL	include/petsc-private/fortranimpl.h	10;"	d
PETSC_STDCALL	include/petscblaslapack_stdcall.h	14;"	d
PETSC_STDERR	include/petscsys.h	/^PETSC_EXTERN FILE* PETSC_STDERR;$/;"	v
PETSC_STDOUT	include/petscsys.h	/^PETSC_EXTERN FILE* PETSC_STDOUT;$/;"	v
PETSC_SUBCOMM_CONTIGUOUS	include/petscsys.h	/^typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType;$/;"	e	enum:__anon32
PETSC_SUBCOMM_GENERAL	include/petscsys.h	/^typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType;$/;"	e	enum:__anon32
PETSC_SUBCOMM_INTERLACED	include/petscsys.h	/^typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType;$/;"	e	enum:__anon32
PETSC_TRUE	include/petscsys.h	/^typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool;$/;"	e	enum:__anon24
PETSC_UNIT_AMOUNT	include/petscdm.h	/^typedef enum {PETSC_UNIT_LENGTH, PETSC_UNIT_MASS, PETSC_UNIT_TIME, PETSC_UNIT_CURRENT, PETSC_UNIT_TEMPERATURE, PETSC_UNIT_AMOUNT, PETSC_UNIT_LUMINOSITY, NUM_PETSC_UNITS} PetscUnit;$/;"	e	enum:__anon21
PETSC_UNIT_CURRENT	include/petscdm.h	/^typedef enum {PETSC_UNIT_LENGTH, PETSC_UNIT_MASS, PETSC_UNIT_TIME, PETSC_UNIT_CURRENT, PETSC_UNIT_TEMPERATURE, PETSC_UNIT_AMOUNT, PETSC_UNIT_LUMINOSITY, NUM_PETSC_UNITS} PetscUnit;$/;"	e	enum:__anon21
PETSC_UNIT_LENGTH	include/petscdm.h	/^typedef enum {PETSC_UNIT_LENGTH, PETSC_UNIT_MASS, PETSC_UNIT_TIME, PETSC_UNIT_CURRENT, PETSC_UNIT_TEMPERATURE, PETSC_UNIT_AMOUNT, PETSC_UNIT_LUMINOSITY, NUM_PETSC_UNITS} PetscUnit;$/;"	e	enum:__anon21
PETSC_UNIT_LUMINOSITY	include/petscdm.h	/^typedef enum {PETSC_UNIT_LENGTH, PETSC_UNIT_MASS, PETSC_UNIT_TIME, PETSC_UNIT_CURRENT, PETSC_UNIT_TEMPERATURE, PETSC_UNIT_AMOUNT, PETSC_UNIT_LUMINOSITY, NUM_PETSC_UNITS} PetscUnit;$/;"	e	enum:__anon21
PETSC_UNIT_MASS	include/petscdm.h	/^typedef enum {PETSC_UNIT_LENGTH, PETSC_UNIT_MASS, PETSC_UNIT_TIME, PETSC_UNIT_CURRENT, PETSC_UNIT_TEMPERATURE, PETSC_UNIT_AMOUNT, PETSC_UNIT_LUMINOSITY, NUM_PETSC_UNITS} PetscUnit;$/;"	e	enum:__anon21
PETSC_UNIT_TEMPERATURE	include/petscdm.h	/^typedef enum {PETSC_UNIT_LENGTH, PETSC_UNIT_MASS, PETSC_UNIT_TIME, PETSC_UNIT_CURRENT, PETSC_UNIT_TEMPERATURE, PETSC_UNIT_AMOUNT, PETSC_UNIT_LUMINOSITY, NUM_PETSC_UNITS} PetscUnit;$/;"	e	enum:__anon21
PETSC_UNIT_TIME	include/petscdm.h	/^typedef enum {PETSC_UNIT_LENGTH, PETSC_UNIT_MASS, PETSC_UNIT_TIME, PETSC_UNIT_CURRENT, PETSC_UNIT_TEMPERATURE, PETSC_UNIT_AMOUNT, PETSC_UNIT_LUMINOSITY, NUM_PETSC_UNITS} PetscUnit;$/;"	e	enum:__anon21
PETSC_USE_FORTRAN_KERNEL_AYPX	include/petscsys.h	1802;"	d
PETSC_USE_FORTRAN_KERNEL_MAXPY	include/petscsys.h	1774;"	d
PETSC_USE_FORTRAN_KERNEL_MDOT	include/petscsys.h	1794;"	d
PETSC_USE_FORTRAN_KERNEL_MULTADDAIJ	include/petscsys.h	1790;"	d
PETSC_USE_FORTRAN_KERNEL_MULTAIJ	include/petscsys.h	1762;"	d
PETSC_USE_FORTRAN_KERNEL_MULTAIJPERM	include/petscsys.h	1758;"	d
PETSC_USE_FORTRAN_KERNEL_MULTCRL	include/petscsys.h	1754;"	d
PETSC_USE_FORTRAN_KERNEL_MULTTRANSPOSEAIJ	include/petscsys.h	1766;"	d
PETSC_USE_FORTRAN_KERNEL_NORM	include/petscsys.h	1770;"	d
PETSC_USE_FORTRAN_KERNEL_RELAXAIJ	include/petscsys.h	1782;"	d
PETSC_USE_FORTRAN_KERNEL_SOLVEAIJ	include/petscsys.h	1778;"	d
PETSC_USE_FORTRAN_KERNEL_SOLVEBAIJ	include/petscsys.h	1786;"	d
PETSC_USE_FORTRAN_KERNEL_WAXPY	include/petscsys.h	1806;"	d
PETSC_USE_FORTRAN_KERNEL_XTIMESY	include/petscsys.h	1798;"	d
PETSC_USE_POINTER	include/petscsys.h	/^typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode;$/;"	e	enum:__anon25
PETSC_VERSION_	include/petscversion.h	20;"	d
PETSC_VERSION_DATE	include/petscversion.h	10;"	d
PETSC_VERSION_DATE_GIT	include/petscversion.h	17;"	d
PETSC_VERSION_GE	include/petscversion.h	41;"	d
PETSC_VERSION_GIT	include/petscversion.h	13;"	d
PETSC_VERSION_GT	include/petscversion.h	38;"	d
PETSC_VERSION_LE	include/petscversion.h	34;"	d
PETSC_VERSION_LT	include/petscversion.h	26;"	d
PETSC_VERSION_MAJOR	include/petscversion.h	5;"	d
PETSC_VERSION_MINOR	include/petscversion.h	6;"	d
PETSC_VERSION_PATCH	include/petscversion.h	8;"	d
PETSC_VERSION_RELEASE	include/petscversion.h	4;"	d
PETSC_VERSION_SUBMINOR	include/petscversion.h	7;"	d
PETSC_VIEWER_AMS_SELF	include/petscviewerams.h	13;"	d
PETSC_VIEWER_AMS_WORLD	include/petscviewerams.h	12;"	d
PETSC_VIEWER_ASCII_COMMON	include/petscviewer.h	/^  PETSC_VIEWER_ASCII_COMMON,$/;"	e	enum:__anon80
PETSC_VIEWER_ASCII_DENSE	include/petscviewer.h	/^  PETSC_VIEWER_ASCII_DENSE,$/;"	e	enum:__anon80
PETSC_VIEWER_ASCII_FACTOR_INFO	include/petscviewer.h	/^  PETSC_VIEWER_ASCII_FACTOR_INFO,$/;"	e	enum:__anon80
PETSC_VIEWER_ASCII_IMPL	include/petscviewer.h	/^  PETSC_VIEWER_ASCII_IMPL,$/;"	e	enum:__anon80
PETSC_VIEWER_ASCII_INDEX	include/petscviewer.h	/^  PETSC_VIEWER_ASCII_INDEX,$/;"	e	enum:__anon80
PETSC_VIEWER_ASCII_INFO	include/petscviewer.h	/^  PETSC_VIEWER_ASCII_INFO,$/;"	e	enum:__anon80
PETSC_VIEWER_ASCII_INFO_DETAIL	include/petscviewer.h	/^  PETSC_VIEWER_ASCII_INFO_DETAIL,$/;"	e	enum:__anon80
PETSC_VIEWER_ASCII_LATEX	include/petscviewer.h	/^  PETSC_VIEWER_ASCII_LATEX,$/;"	e	enum:__anon80
PETSC_VIEWER_ASCII_MATHEMATICA	include/petscviewer.h	/^  PETSC_VIEWER_ASCII_MATHEMATICA,$/;"	e	enum:__anon80
PETSC_VIEWER_ASCII_MATLAB	include/petscviewer.h	/^  PETSC_VIEWER_ASCII_MATLAB,$/;"	e	enum:__anon80
PETSC_VIEWER_ASCII_MATRIXMARKET	include/petscviewer.h	/^  PETSC_VIEWER_ASCII_MATRIXMARKET,$/;"	e	enum:__anon80
PETSC_VIEWER_ASCII_PCICE	include/petscviewer.h	/^  PETSC_VIEWER_ASCII_PCICE,$/;"	e	enum:__anon80
PETSC_VIEWER_ASCII_PYTHON	include/petscviewer.h	/^  PETSC_VIEWER_ASCII_PYTHON,$/;"	e	enum:__anon80
PETSC_VIEWER_ASCII_SYMMODU	include/petscviewer.h	/^  PETSC_VIEWER_ASCII_SYMMODU,$/;"	e	enum:__anon80
PETSC_VIEWER_ASCII_VTK	include/petscviewer.h	/^  PETSC_VIEWER_ASCII_VTK,$/;"	e	enum:__anon80
PETSC_VIEWER_ASCII_VTK_CELL	include/petscviewer.h	/^  PETSC_VIEWER_ASCII_VTK_CELL,$/;"	e	enum:__anon80
PETSC_VIEWER_ASCII_VTK_COORDS	include/petscviewer.h	/^  PETSC_VIEWER_ASCII_VTK_COORDS,$/;"	e	enum:__anon80
PETSC_VIEWER_BINARY_MATLAB	include/petscviewer.h	/^  PETSC_VIEWER_BINARY_MATLAB,$/;"	e	enum:__anon80
PETSC_VIEWER_BINARY_SELF	include/petscviewer.h	270;"	d
PETSC_VIEWER_BINARY_SELF_FORTRAN	include/petsc-private/fortranimpl.h	154;"	d
PETSC_VIEWER_BINARY_WORLD	include/petscviewer.h	263;"	d
PETSC_VIEWER_BINARY_WORLD_FORTRAN	include/petsc-private/fortranimpl.h	153;"	d
PETSC_VIEWER_CLASSID	include/petscviewer.h	/^PETSC_EXTERN PetscClassId PETSC_VIEWER_CLASSID;$/;"	v
PETSC_VIEWER_DEFAULT	include/petscviewer.h	/^  PETSC_VIEWER_DEFAULT,$/;"	e	enum:__anon80
PETSC_VIEWER_DRAW_BASIC	include/petscviewer.h	/^  PETSC_VIEWER_DRAW_BASIC,$/;"	e	enum:__anon80
PETSC_VIEWER_DRAW_CONTOUR	include/petscviewer.h	/^  PETSC_VIEWER_DRAW_CONTOUR,$/;"	e	enum:__anon80
PETSC_VIEWER_DRAW_LG	include/petscviewer.h	/^  PETSC_VIEWER_DRAW_LG,$/;"	e	enum:__anon80
PETSC_VIEWER_DRAW_PORTS	include/petscviewer.h	/^  PETSC_VIEWER_DRAW_PORTS,$/;"	e	enum:__anon80
PETSC_VIEWER_DRAW_SELF	include/petscviewer.h	242;"	d
PETSC_VIEWER_DRAW_SELF_FORTRAN	include/petsc-private/fortranimpl.h	146;"	d
PETSC_VIEWER_DRAW_WORLD	include/petscviewer.h	235;"	d
PETSC_VIEWER_DRAW_WORLD_FORTRAN	include/petsc-private/fortranimpl.h	145;"	d
PETSC_VIEWER_MATHEMATICA_WORLD	include/petscviewer.h	286;"	d
PETSC_VIEWER_MATHEMATICA_WORLD_PRIVATE	include/petscviewer.h	/^PETSC_EXTERN PetscViewer   PETSC_VIEWER_MATHEMATICA_WORLD_PRIVATE;$/;"	v
PETSC_VIEWER_MATLAB_SELF	include/petscviewer.h	284;"	d
PETSC_VIEWER_MATLAB_SELF_FORTRAN	include/petsc-private/fortranimpl.h	156;"	d
PETSC_VIEWER_MATLAB_WORLD	include/petscviewer.h	277;"	d
PETSC_VIEWER_MATLAB_WORLD_FORTRAN	include/petsc-private/fortranimpl.h	155;"	d
PETSC_VIEWER_NATIVE	include/petscviewer.h	/^  PETSC_VIEWER_NATIVE,$/;"	e	enum:__anon80
PETSC_VIEWER_NOFORMAT	include/petscviewer.h	/^  PETSC_VIEWER_NOFORMAT$/;"	e	enum:__anon80
PETSC_VIEWER_SOCKET_SELF	include/petscviewer.h	256;"	d
PETSC_VIEWER_SOCKET_SELF_FORTRAN	include/petsc-private/fortranimpl.h	148;"	d
PETSC_VIEWER_SOCKET_WORLD	include/petscviewer.h	249;"	d
PETSC_VIEWER_SOCKET_WORLD_FORTRAN	include/petsc-private/fortranimpl.h	147;"	d
PETSC_VIEWER_STDERR_SELF	include/petscviewer.h	213;"	d
PETSC_VIEWER_STDERR_SELF_FORTRAN	include/petsc-private/fortranimpl.h	152;"	d
PETSC_VIEWER_STDERR_WORLD	include/petscviewer.h	214;"	d
PETSC_VIEWER_STDERR_WORLD_FORTRAN	include/petsc-private/fortranimpl.h	151;"	d
PETSC_VIEWER_STDOUT_SELF	include/petscviewer.h	228;"	d
PETSC_VIEWER_STDOUT_SELF_FORTRAN	include/petsc-private/fortranimpl.h	150;"	d
PETSC_VIEWER_STDOUT_WORLD	include/petscviewer.h	221;"	d
PETSC_VIEWER_STDOUT_WORLD_FORTRAN	include/petsc-private/fortranimpl.h	149;"	d
PETSC_VIEWER_VTK_VTS	include/petscviewer.h	/^  PETSC_VIEWER_VTK_VTS,$/;"	e	enum:__anon80
PETSC_VIEWER_VTK_VTU	include/petscviewer.h	/^  PETSC_VIEWER_VTK_VTU,$/;"	e	enum:__anon80
PETSC_VISIBILITY_INTERNAL	include/petscsys.h	46;"	d
PETSC_VISIBILITY_INTERNAL	include/petscsys.h	50;"	d
PETSC_VISIBILITY_INTERNAL	include/petscsys.h	54;"	d
PETSC_VISIBILITY_PUBLIC	include/petscsys.h	58;"	d
PETSC_VISIBILITY_PUBLIC	include/petscsys.h	60;"	d
PETSC_VTK_CELL_FIELD	include/petscviewer.h	/^typedef enum {PETSC_VTK_POINT_FIELD, PETSC_VTK_POINT_VECTOR_FIELD, PETSC_VTK_CELL_FIELD, PETSC_VTK_CELL_VECTOR_FIELD} PetscViewerVTKFieldType;$/;"	e	enum:__anon81
PETSC_VTK_CELL_VECTOR_FIELD	include/petscviewer.h	/^typedef enum {PETSC_VTK_POINT_FIELD, PETSC_VTK_POINT_VECTOR_FIELD, PETSC_VTK_CELL_FIELD, PETSC_VTK_CELL_VECTOR_FIELD} PetscViewerVTKFieldType;$/;"	e	enum:__anon81
PETSC_VTK_POINT_FIELD	include/petscviewer.h	/^typedef enum {PETSC_VTK_POINT_FIELD, PETSC_VTK_POINT_VECTOR_FIELD, PETSC_VTK_CELL_FIELD, PETSC_VTK_CELL_VECTOR_FIELD} PetscViewerVTKFieldType;$/;"	e	enum:__anon81
PETSC_VTK_POINT_VECTOR_FIELD	include/petscviewer.h	/^typedef enum {PETSC_VTK_POINT_FIELD, PETSC_VTK_POINT_VECTOR_FIELD, PETSC_VTK_CELL_FIELD, PETSC_VTK_CELL_VECTOR_FIELD} PetscViewerVTKFieldType;$/;"	e	enum:__anon81
PETSC___FLOAT128	include/petscsys.h	/^              PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10,PETSC_OBJECT = 11, PETSC_FUNCTION = 12} PetscDataType;$/;"	e	enum:__anon26
PETSC_i	include/petscmath.h	/^PETSC_EXTERN PetscComplex PETSC_i;$/;"	v
PETSc	bin/pythonscripts/PetscBinaryIO_tests.py	/^from petsc4py import PETSc$/;"	i
PETSc	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^import PETSc.FEM$/;"	i
PETSc	bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py	/^import PETSc.FEM$/;"	i
PETSc	config/BuildSystem/regression/testCase.py	/^      import PETSc.Base$/;"	i
PETSc	config/PETSc/packages/Chaco.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/FFC.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/Generator.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/MUMPS.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/Mathematica.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/Matlab.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/MatlabEngine.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/Numpy.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/P3Dlib.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/PARTY.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/PTScotch.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/PVODE.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/PaStiX.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/Sieve.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/Suggar.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/SuperLU.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/SuperLU_DIST.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/Triangle.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/X.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/Zoltan.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/afterimage.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/ams.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/babel.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/c2html.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/ccafe.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/clique.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/cmake.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/cproto.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/ctetgen.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/cuda.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/elemental.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/expat.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/fftw.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/glut.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/hwloc.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/hypre.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/java.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/lgrind.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/metis.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/ml.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/mpe.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/mpi4py.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/opengl.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/openmp.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/oski.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/pARMS.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/pami.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/papi.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/parmetis.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/pcbddc.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/petsc4py.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/pthread.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/pthreadclasses.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/scalapack.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/server.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/sowing.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/spai.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/sprng.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/sundials.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/tetgen.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/threadcomm.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/valgrind.py	/^import PETSc.package$/;"	i
PETSc	config/PETSc/packages/yaml.py	/^import PETSc.package$/;"	i
PETSc	include/petsclog.hh	/^namespace PETSc {$/;"	n
PETSc	include/petscsys.hh	/^namespace PETSc {$/;"	n
PETSc	include/sieve/Overlap.hh	/^namespace PETSc {$/;"	n
PETScConfigureInfo	config/builder.py	/^class PETScConfigureInfo(object):$/;"	c
PETScMaker	config/builder.py	/^class PETScMaker(script.Script):$/;"	c
PETScMaker	config/cmakeboot.py	/^class PETScMaker(script.Script):$/;"	c
PETScTest	config/BuildSystem/regression/testCase.py	/^class PETScTest (MPITest):$/;"	c
PF	include/petscpf.h	/^typedef struct _p_PF* PF;$/;"	t	typeref:struct:_p_PF
PFCONSTANT	include/petscpf.h	22;"	d
PFIDENTITY	include/petscpf.h	26;"	d
PFLOTRAN	include/petscdmmesh_formats.hh	/^  namespace PFLOTRAN {$/;"	n	namespace:ALE
PFLOTRANMesh	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^} PFLOTRANMesh;$/;"	t	typeref:struct:__anon4	file:
PFList	include/petscpf.h	/^PETSC_EXTERN PetscFunctionList PFList;$/;"	v
PFMAT	include/petscpf.h	23;"	d
PFMATLAB	include/petscpf.h	27;"	d
PFQUICK	include/petscpf.h	25;"	d
PFRegisterAllCalled	include/petscpf.h	/^PETSC_EXTERN PetscBool PFRegisterAllCalled;$/;"	v
PFSTRING	include/petscpf.h	24;"	d
PFSetOptionsPrefix	include/petscpf.h	60;"	d
PFType	include/petscpf.h	/^typedef const char* PFType;$/;"	t
PF_CLASSID	include/petscpf.h	/^PETSC_EXTERN PetscClassId PF_CLASSID;$/;"	v
PTHREAD	include/petscthreadcomm.h	28;"	d
Package	config/BuildSystem/config/package.py	/^class Package(config.base.Configure):$/;"	c
Pair	include/sieve/ALE_containers.hh	/^    Pair() : first(0), second(0) {};$/;"	f	class:ALE::Pair
Pair	include/sieve/ALE_containers.hh	/^    Pair(FirstType f) : first(f), second(0) {};$/;"	f	class:ALE::Pair
Pair	include/sieve/ALE_containers.hh	/^    Pair(FirstType f, SecondType s) : first(f), second(s) {};$/;"	f	class:ALE::Pair
Pair	include/sieve/ALE_containers.hh	/^    Pair(const Pair& p) : first(p.first), second(p.second) {};$/;"	f	class:ALE::Pair
Pair	include/sieve/ALE_containers.hh	/^  class Pair {$/;"	c	namespace:ALE
ParMetis	include/sieve/Partitioner.hh	/^    namespace ParMetis {$/;"	n	namespace:ALE::New
ParMetis	include/sieve/Partitioner.hh	/^  namespace ParMetis {$/;"	n	namespace:ALE
ParallelFactory	include/sieve/Completion.hh	/^      ParallelFactory(const int debug) : _debug(debug) {$/;"	f	class:ALE::New::ParallelFactory
ParallelFactory	include/sieve/Completion.hh	/^    class ParallelFactory {$/;"	c	namespace:ALE::New
ParallelObject	include/sieve/ALE_containers.hh	/^    ParallelObject(MPI_Comm comm = PETSC_COMM_SELF, const int debug = 0) : _debug(debug) {__init(comm);}$/;"	f	class:ALE::ParallelObject
ParallelObject	include/sieve/ALE_containers.hh	/^  class ParallelObject {$/;"	c	namespace:ALE
ParallelTetrahedronTest	src/dm/impls/mesh/examples/tests/refinementTest.cxx	/^PetscErrorCode ParallelTetrahedronTest(const Options *options)$/;"	f
Parser	config/BuildSystem/build/templates/usingSIDL.py	/^      import SIDLLanguage.Parser$/;"	i
ParserState	include/petscdmmesh_formats.hh	/^      enum ParserState {OUTSIDE, INSIDE_MESH, INSIDE_VERTICES, INSIDE_CELLS, DONE};$/;"	g	class:ALE::Dolfin::XMLMesh
PartialAssemblyTest	src/dm/impls/mesh/examples/tests/operator1.cxx	/^PetscErrorCode PartialAssemblyTest(const Obj<ALE::Mesh>& m, Options *options)$/;"	f
PartitionDomain	include/sieve/Sections.hh	/^      PartitionDomain() {};$/;"	f	class:ALE::New::PartitionDomain
PartitionDomain	include/sieve/Sections.hh	/^    class PartitionDomain {$/;"	c	namespace:ALE::New
PartitionSection	include/sieve/Sections.hh	/^      PartitionSection(const Obj<bundle_type>& bundle, const int elementHeight, const int numElements, const marker_type *partition) : ParallelObject(MPI_COMM_SELF, bundle->debug()), _height(elementHeight) {$/;"	f	class:ALE::New::PartitionSection
PartitionSection	include/sieve/Sections.hh	/^    class PartitionSection : public ALE::ParallelObject {$/;"	c	namespace:ALE::New
PartitionSizeSection	include/sieve/Sections.hh	/^      PartitionSizeSection(const Obj<bundle_type>& bundle, const int elementHeight, const int numElements, const marker_type *partition) : ParallelObject(MPI_COMM_SELF, bundle->debug()), _height(elementHeight) {$/;"	f	class:ALE::New::PartitionSizeSection
PartitionSizeSection	include/sieve/Sections.hh	/^    class PartitionSizeSection : public ALE::ParallelObject {$/;"	c	namespace:ALE::New
PartitionTests	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^PetscErrorCode PartitionTests(const Options *options)$/;"	f
Partitioner	include/sieve/Partitioner.hh	/^      Partitioner() {};$/;"	f	class:ALE::Simple::Partitioner
Partitioner	include/sieve/Partitioner.hh	/^      Partitioner(): logSize(10000) {};$/;"	f	class:ALE::Chaco::Partitioner
Partitioner	include/sieve/Partitioner.hh	/^      class Partitioner {$/;"	c	namespace:ALE::New::Chaco
Partitioner	include/sieve/Partitioner.hh	/^      class Partitioner {$/;"	c	namespace:ALE::New::ParMetis
Partitioner	include/sieve/Partitioner.hh	/^      class Partitioner {$/;"	c	namespace:ALE::New::Zoltan
Partitioner	include/sieve/Partitioner.hh	/^    class Partitioner {$/;"	c	namespace:ALE::Chaco
Partitioner	include/sieve/Partitioner.hh	/^    class Partitioner {$/;"	c	namespace:ALE::New
Partitioner	include/sieve/Partitioner.hh	/^    class Partitioner {$/;"	c	namespace:ALE::ParMetis
Partitioner	include/sieve/Partitioner.hh	/^    class Partitioner {$/;"	c	namespace:ALE::Simple
Partitioner	include/sieve/Partitioner.hh	/^  class Partitioner {$/;"	c	namespace:ALE
PassiveReal	include/petscmath.h	415;"	d
PassiveScalar	include/petscmath.h	416;"	d
Patch	config/BuildSystem/patch.py	/^class Patch(object):$/;"	c
PatchSet	config/BuildSystem/patch.py	/^class PatchSet(object):$/;"	c
Petsc64bitInt	include/petscsys.h	/^typedef __int64 Petsc64bitInt;$/;"	t
Petsc64bitInt	include/petscsys.h	/^typedef long long Petsc64bitInt;$/;"	t
PetscAbs	include/petscmath.h	227;"	d
PetscAbsComplex	include/petscmath.h	109;"	d
PetscAbsComplex	include/petscmath.h	123;"	d
PetscAbsComplex	include/petscmath.h	138;"	d
PetscAbsComplex	include/petscmath.h	79;"	d
PetscAbsInt	include/petscmath.h	328;"	d
PetscAbsReal	include/petscmath.h	348;"	d
PetscAbsScalar	include/petscmath.h	/^PETSC_STATIC_INLINE PetscReal PetscAbsScalar(PetscScalar a) {return a < 0.0 ? -a : a;}$/;"	f
PetscAbsScalar	include/petscmath.h	186;"	d
PetscAddrAlign	include/petscsys.h	526;"	d
PetscAttrMPIPointerWithType	include/petscsys.h	109;"	d
PetscAttrMPIPointerWithType	include/petscsys.h	115;"	d
PetscAttrMPITypeTag	include/petscsys.h	110;"	d
PetscAttrMPITypeTag	include/petscsys.h	116;"	d
PetscAttrMPITypeTagLayoutCompatible	include/petscsys.h	111;"	d
PetscAttrMPITypeTagLayoutCompatible	include/petscsys.h	117;"	d
PetscBLASInt	include/petscsys.h	/^typedef Petsc64bitInt PetscBLASInt;$/;"	t
PetscBLASInt	include/petscsys.h	/^typedef int PetscBLASInt;$/;"	t
PetscBLASIntCast	include/petscsys.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscBLASIntCast(PetscInt a,PetscBLASInt *b)$/;"	f
PetscBT	include/petscbt.h	/^typedef char* PetscBT;$/;"	t
PetscBTClear	include/petscbt.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscBTClear(PetscBT array,PetscInt index)$/;"	f
PetscBTCreate	include/petscbt.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscBTCreate(PetscInt m,PetscBT *array)$/;"	f
PetscBTDestroy	include/petscbt.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscBTDestroy(PetscBT *array)$/;"	f
PetscBTLength	include/petscbt.h	/^PETSC_STATIC_INLINE PetscInt  PetscBTLength(PetscInt m)$/;"	f
PetscBTLookup	include/petscbt.h	/^PETSC_STATIC_INLINE char PetscBTLookup(PetscBT array,PetscInt index)$/;"	f
PetscBTLookupClear	include/petscbt.h	/^PETSC_STATIC_INLINE char PetscBTLookupClear(PetscBT array,PetscInt index)$/;"	f
PetscBTLookupSet	include/petscbt.h	/^PETSC_STATIC_INLINE char PetscBTLookupSet(PetscBT array,PetscInt index)$/;"	f
PetscBTMemzero	include/petscbt.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscBTMemzero(PetscInt m,PetscBT array)$/;"	f
PetscBTSet	include/petscbt.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscBTSet(PetscBT array,PetscInt index)$/;"	f
PetscBTView	include/petscbt.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscBTView(PetscInt m,const PetscBT bt,PetscViewer viewer)$/;"	f
PetscBag	include/finclude/petscbagdef.h	10;"	d
PetscBag	include/petscbag.h	/^typedef struct _n_PetscBag*     PetscBag;$/;"	t	typeref:struct:_n_PetscBag
PetscBagItem	include/petscbag.h	/^typedef struct _n_PetscBagItem* PetscBagItem;$/;"	t	typeref:struct:_n_PetscBagItem
PetscBeganMPI	include/petscsys.h	/^PETSC_EXTERN PetscBool PetscBeganMPI;$/;"	v
PetscBinaryIO	bin/pythonscripts/PetscBinaryIO.py	/^class PetscBinaryIO(object):$/;"	c
PetscBinarySeekType	include/finclude/petscsysdef.h	204;"	d
PetscBinarySeekType	include/petscsys.h	/^typedef enum {PETSC_BINARY_SEEK_SET = 0,PETSC_BINARY_SEEK_CUR = 1,PETSC_BINARY_SEEK_END = 2} PetscBinarySeekType;$/;"	t	typeref:enum:__anon29
PetscBinaryWrite	bin/matlab/PetscBinaryWrite.m.html	/^function PetscBinaryWrite(inarg,varargin)$/;"	f
PetscBool	bin/matlab/classes/matlabheader.h	/^typedef int PetscBool;$/;"	t
PetscBool	include/finclude/petscsysdef.h	27;"	d
PetscBool	include/finclude/petscsysdef.h	78;"	d
PetscBool	include/finclude/petscsysdef.h	79;"	d
PetscBool	include/petscsys.h	/^typedef enum { PETSC_FALSE,PETSC_TRUE } PetscBool;$/;"	t	typeref:enum:__anon24
PetscBools	include/petscsys.h	/^PETSC_EXTERN const char *const PetscBools[];$/;"	v
PetscBuildTwoSidedType	include/finclude/petscsysdef.h	206;"	d
PetscBuildTwoSidedType	include/petscsys.h	/^} PetscBuildTwoSidedType;$/;"	t	typeref:enum:__anon30
PetscBuildTwoSidedTypes	include/petscsys.h	/^PETSC_EXTERN const char *const PetscBuildTwoSidedTypes[];$/;"	v
PetscCDArrNd	include/petscmat.h	/^}PetscCDArrNd;$/;"	t	typeref:struct:_PetscCDArrNd
PetscCDIntNd	include/petscmat.h	/^}PetscCDIntNd;$/;"	t	typeref:struct:_PetscCDIntNd
PetscCDPos	include/petsc-private/matimpl.h	/^typedef PetscCDIntNd *PetscCDPos;$/;"	t
PetscCUSPFlag	include/petsc-private/petscimpl.h	/^typedef enum {PETSC_CUSP_UNALLOCATED,PETSC_CUSP_GPU,PETSC_CUSP_CPU,PETSC_CUSP_BOTH} PetscCUSPFlag;$/;"	t	typeref:enum:__anon15
PetscCUSPIndices	include/petscvec.h	/^typedef struct _p_PetscCUSPIndices* PetscCUSPIndices;$/;"	t	typeref:struct:_p_PetscCUSPIndices
PetscCUSPSynchronize	include/petscsys.h	/^PETSC_EXTERN PetscBool PetscCUSPSynchronize;$/;"	v
PetscChar	include/finclude/petscsysdef.h	96;"	d
PetscCheckSameComm	include/petsc-private/petscimpl.h	253;"	d
PetscCheckSameComm	include/petsc-private/petscimpl.h	277;"	d
PetscCheckSameType	include/petsc-private/petscimpl.h	251;"	d
PetscCheckSameType	include/petsc-private/petscimpl.h	267;"	d
PetscCheckSameTypeAndComm	include/petsc-private/petscimpl.h	254;"	d
PetscCheckSameTypeAndComm	include/petsc-private/petscimpl.h	284;"	d
PetscCheck__FUNCT__	include/petscerror.h	639;"	d
PetscClassId	include/finclude/petscsysdef.h	72;"	d
PetscClassId	include/petscsys.h	/^typedef int PetscClassId;$/;"	t
PetscClassPerfInfo	include/petsclog.h	/^} PetscClassPerfInfo;$/;"	t	typeref:struct:__anon63
PetscClassPerfLog	include/petsclog.h	/^typedef struct _n_PetscClassPerfLog *PetscClassPerfLog;$/;"	t	typeref:struct:_n_PetscClassPerfLog
PetscClassRegInfo	include/petsclog.h	/^} PetscClassRegInfo;$/;"	t	typeref:struct:__anon62
PetscClassRegLog	include/petsclog.h	/^typedef struct _n_PetscClassRegLog *PetscClassRegLog;$/;"	t	typeref:struct:_n_PetscClassRegLog
PetscClipInterval	include/petscmath.h	309;"	d
PetscCoarsenData	include/petscmat.h	/^}PetscCoarsenData;$/;"	t	typeref:struct:_PetscCoarsenData
PetscCommCounter	include/petsc-private/petscimpl.h	/^} PetscCommCounter;$/;"	t	typeref:struct:__anon14
PetscComplex	include/petscmath.h	/^typedef __complex128 PetscComplex;$/;"	t
PetscComplex	include/petscmath.h	/^typedef complexlib::complex<__float128> PetscComplex; \/* Notstandard and not expected to work, use __complex128 *\/$/;"	t
PetscComplex	include/petscmath.h	/^typedef complexlib::complex<double> PetscComplex;$/;"	t
PetscComplex	include/petscmath.h	/^typedef complexlib::complex<float> PetscComplex;$/;"	t
PetscComplex	include/petscmath.h	/^typedef double _Complex PetscComplex;$/;"	t
PetscComplex	include/petscmath.h	/^typedef float _Complex PetscComplex;$/;"	t
PetscConj	include/finclude/petscsysdef.h	137;"	d
PetscConj	include/petscmath.h	187;"	d
PetscConj	include/petscmath.h	207;"	d
PetscConjComplex	include/petscmath.h	110;"	d
PetscConjComplex	include/petscmath.h	124;"	d
PetscConjComplex	include/petscmath.h	139;"	d
PetscConjComplex	include/petscmath.h	80;"	d
PetscContainer	include/petscsys.h	/^typedef struct _p_PetscContainer*  PetscContainer;$/;"	t	typeref:struct:_p_PetscContainer
PetscCopyMode	include/finclude/petscsysdef.h	82;"	d
PetscCopyMode	include/petscsys.h	/^typedef enum { PETSC_COPY_VALUES, PETSC_OWN_POINTER, PETSC_USE_POINTER} PetscCopyMode;$/;"	t	typeref:enum:__anon25
PetscCopyModes	include/petscsys.h	/^PETSC_EXTERN const char *const PetscCopyModes[];$/;"	v
PetscCosComplex	include/petscmath.h	116;"	d
PetscCosComplex	include/petscmath.h	130;"	d
PetscCosComplex	include/petscmath.h	145;"	d
PetscCosComplex	include/petscmath.h	86;"	d
PetscCosReal	include/petscmath.h	32;"	d
PetscCosReal	include/petscmath.h	41;"	d
PetscCosReal	include/petscmath.h	58;"	d
PetscCosScalar	include/petscmath.h	193;"	d
PetscCosScalar	include/petscmath.h	214;"	d
PetscCosScalar	include/petscmath.h	221;"	d
PetscDLHandle	include/petscsys.h	/^typedef void* PetscDLHandle;$/;"	t
PetscDLLibrariesLoaded	include/petscsys.h	/^PETSC_EXTERN PetscDLLibrary  PetscDLLibrariesLoaded;$/;"	v
PetscDLLibrary	include/petscsys.h	/^typedef struct _n_PetscDLLibrary *PetscDLLibrary;$/;"	t	typeref:struct:_n_PetscDLLibrary
PetscDLMode	include/petscsys.h	/^typedef enum {PETSC_DL_DECIDE=0,PETSC_DL_NOW=1,PETSC_DL_LOCAL=2} PetscDLMode;$/;"	t	typeref:enum:__anon28
PetscDTComputeJacobi	src/dm/dt/interface/dt.c	/^PETSC_STATIC_INLINE PetscErrorCode PetscDTComputeJacobi(PetscReal a, PetscReal b, PetscInt n, PetscReal x, PetscReal *P)$/;"	f
PetscDTComputeJacobiDerivative	src/dm/dt/interface/dt.c	/^PETSC_STATIC_INLINE PetscErrorCode PetscDTComputeJacobiDerivative(PetscReal a, PetscReal b, PetscInt n, PetscReal x, PetscReal *P)$/;"	f
PetscDTFactorial_Internal	src/dm/dt/interface/dt.c	/^PETSC_STATIC_INLINE PetscErrorCode PetscDTFactorial_Internal(PetscInt n, PetscReal *factorial)$/;"	f
PetscDTGaussJacobiQuadrature	src/dm/dt/interface/dt.c	/^PetscErrorCode PetscDTGaussJacobiQuadrature(PetscInt dim, PetscInt npoints, PetscReal a, PetscReal b, PetscReal *points[], PetscReal *weights[])$/;"	f
PetscDTGaussJacobiQuadrature1D_Internal	src/dm/dt/interface/dt.c	/^static PetscErrorCode PetscDTGaussJacobiQuadrature1D_Internal(PetscInt npoints, PetscReal a, PetscReal b, PetscReal *x, PetscReal *w)$/;"	f	file:
PetscDTGaussQuadrature	src/dm/dt/interface/dt.c	/^PetscErrorCode PetscDTGaussQuadrature(PetscInt npoints,PetscReal a,PetscReal b,PetscReal *x,PetscReal *w)$/;"	f
PetscDTLegendreEval	src/dm/dt/interface/dt.c	/^PetscErrorCode PetscDTLegendreEval(PetscInt npoints,const PetscReal *points,PetscInt ndegree,const PetscInt *degrees,PetscReal *B,PetscReal *D,PetscReal *D2)$/;"	f
PetscDTLegendreIntegrate	src/dm/dt/interface/dt.c	/^static PetscErrorCode PetscDTLegendreIntegrate(PetscInt ninterval,const PetscReal *x,PetscInt ndegree,const PetscInt *degrees,PetscBool Transpose,PetscReal *B)$/;"	f	file:
PetscDTMapCubeToTetrahedron_Internal	src/dm/dt/interface/dt.c	/^PETSC_STATIC_INLINE PetscErrorCode PetscDTMapCubeToTetrahedron_Internal(PetscReal x, PetscReal y, PetscReal z, PetscReal *xi, PetscReal *eta, PetscReal *zeta)$/;"	f
PetscDTMapSquareToTriangle_Internal	src/dm/dt/interface/dt.c	/^PETSC_STATIC_INLINE PetscErrorCode PetscDTMapSquareToTriangle_Internal(PetscReal x, PetscReal y, PetscReal *xi, PetscReal *eta)$/;"	f
PetscDTPseudoInverseQR	src/dm/dt/interface/dt.c	/^static PetscErrorCode PetscDTPseudoInverseQR(PetscInt m,PetscInt mstride,PetscInt n,PetscReal *A_in,PetscReal *Ainv_out,PetscScalar *tau,PetscInt worksize,PetscScalar *work)$/;"	f	file:
PetscDTReconstructPoly	src/dm/dt/interface/dt.c	/^PetscErrorCode PetscDTReconstructPoly(PetscInt degree,PetscInt nsource,const PetscReal *sourcex,PetscInt ntarget,const PetscReal *targetx,PetscReal *R)$/;"	f
PetscDataType	include/finclude/petscsysdef.h	84;"	d
PetscDataType	include/petscsys.h	/^              PETSC_CHAR = 6,PETSC_BIT_LOGICAL = 7,PETSC_ENUM = 8,PETSC_BOOL=9, PETSC___FLOAT128 = 10,PETSC_OBJECT = 11, PETSC_FUNCTION = 12} PetscDataType;$/;"	t	typeref:enum:__anon26
PetscDataTypes	include/petscsys.h	/^PETSC_EXTERN const char *const PetscDataTypes[];$/;"	v
PetscDraw	include/finclude/petscdrawdef.h	9;"	d
PetscDraw	include/petscdrawtypes.h	/^typedef struct _p_PetscDraw* PetscDraw;$/;"	t	typeref:struct:_p_PetscDraw
PetscDrawAxis	include/finclude/petscdrawdef.h	11;"	d
PetscDrawAxis	include/petscdrawtypes.h	/^typedef struct _p_PetscDrawAxis* PetscDrawAxis;$/;"	t	typeref:struct:_p_PetscDrawAxis
PetscDrawButton	include/finclude/petscdrawdef.h	15;"	d
PetscDrawButton	include/petscdraw.h	/^typedef enum {PETSC_BUTTON_NONE,PETSC_BUTTON_LEFT,PETSC_BUTTON_CENTER,PETSC_BUTTON_RIGHT,PETSC_BUTTON_LEFT_SHIFT,PETSC_BUTTON_CENTER_SHIFT,PETSC_BUTTON_RIGHT_SHIFT} PetscDrawButton;$/;"	t	typeref:enum:__anon14
PetscDrawHG	include/finclude/petscdrawdef.h	13;"	d
PetscDrawHG	include/petscdrawtypes.h	/^typedef struct _p_PetscDrawHG*   PetscDrawHG;$/;"	t	typeref:struct:_p_PetscDrawHG
PetscDrawLG	include/finclude/petscdrawdef.h	10;"	d
PetscDrawLG	include/petscdrawtypes.h	/^typedef struct _p_PetscDrawLG*   PetscDrawLG;$/;"	t	typeref:struct:_p_PetscDrawLG
PetscDrawList	include/petscdraw.h	/^PETSC_EXTERN PetscFunctionList PetscDrawList;$/;"	v
PetscDrawMesh	include/finclude/petscdrawdef.h	14;"	d
PetscDrawSP	include/finclude/petscdrawdef.h	12;"	d
PetscDrawSP	include/petscdrawtypes.h	/^typedef struct _p_PetscDrawSP*   PetscDrawSP;$/;"	t	typeref:struct:_p_PetscDrawSP
PetscDrawType	include/finclude/petscdrawdef.h	16;"	d
PetscDrawType	include/petscdraw.h	/^typedef const char* PetscDrawType;$/;"	t
PetscDrawViewPorts	include/petscdraw.h	/^} PetscDrawViewPorts;$/;"	t	typeref:struct:__anon15
PetscEnum	include/finclude/petscsysdef.h	70;"	d
PetscEnum	include/petscsys.h	/^typedef enum { ENUM_DUMMY } PetscEnum;$/;"	t	typeref:enum:__anon22
PetscErrorCode	include/finclude/petscsysdef.h	71;"	d
PetscErrorCode	include/petscsys.h	/^typedef int PetscErrorCode;$/;"	t
PetscErrorCodeFunction	include/petscsys.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscErrorCodeFunction)(void);$/;"	t
PetscErrorPrintf	include/petscerror.h	/^PETSC_EXTERN PetscErrorCode (*PetscErrorPrintf)(const char[],...);$/;"	v
PetscErrorType	include/petscerror.h	/^typedef enum {PETSC_ERROR_INITIAL=0,PETSC_ERROR_REPEAT=1,PETSC_ERROR_IN_CXX = 2} PetscErrorType;$/;"	t	typeref:enum:__anon11
PetscEventPerfInfo	include/petsclog.h	/^} PetscEventPerfInfo;$/;"	t	typeref:struct:__anon65
PetscEventPerfLog	include/petsclog.h	/^typedef struct _n_PetscEventPerfLog *PetscEventPerfLog;$/;"	t	typeref:struct:_n_PetscEventPerfLog
PetscEventRegInfo	include/petsclog.h	/^} PetscEventRegInfo;$/;"	t	typeref:struct:__anon64
PetscEventRegLog	include/petsclog.h	/^typedef struct _n_PetscEventRegLog *PetscEventRegLog;$/;"	t	typeref:struct:_n_PetscEventRegLog
PetscExpComplex	include/petscmath.h	113;"	d
PetscExpComplex	include/petscmath.h	127;"	d
PetscExpComplex	include/petscmath.h	142;"	d
PetscExpComplex	include/petscmath.h	83;"	d
PetscExpPassiveScalar	include/petscmath.h	24;"	d
PetscExpReal	include/petscmath.h	29;"	d
PetscExpReal	include/petscmath.h	38;"	d
PetscExpReal	include/petscmath.h	55;"	d
PetscExpScalar	include/petscmath.h	190;"	d
PetscExpScalar	include/petscmath.h	211;"	d
PetscExpScalar	include/petscmath.h	218;"	d
PetscFEM	include/petscdm.h	/^} PetscFEM;$/;"	t	typeref:struct:__anon20
PetscFPT	include/petsc-private/petscfptimpl.h	/^typedef struct _n_PetscFPT* PetscFPT;$/;"	t	typeref:struct:_n_PetscFPT
PetscFPTAdd	include/petsc-private/petscfptimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscFPTAdd(void* key,const char* data)$/;"	f
PetscFPTCreate	include/petsc-private/petscfptimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode  PetscFPTCreate(PetscInt n)$/;"	f
PetscFPTDestroy	include/petsc-private/petscfptimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode  PetscFPTDestroy(void)$/;"	f
PetscFPTFind	include/petsc-private/petscfptimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode  PetscFPTFind(void* key,char const **data)$/;"	f
PetscFPTView	include/petsc-private/petscfptimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode  PetscFPTView(PetscViewer viewer)$/;"	f
PetscFPTrap	include/finclude/petscsysdef.h	85;"	d
PetscFPTrap	include/petscerror.h	/^typedef enum {PETSC_FP_TRAP_OFF=0,PETSC_FP_TRAP_ON=1} PetscFPTrap;$/;"	t	typeref:enum:__anon12
PetscFileMode	bin/matlab/classes/matlabheader.h	/^typedef int PetscFileMode;$/;"	t
PetscFileMode	include/finclude/petscviewerdef.h	12;"	d
PetscFileMode	include/petscsys.h	/^typedef enum {FILE_MODE_READ, FILE_MODE_WRITE, FILE_MODE_APPEND, FILE_MODE_UPDATE, FILE_MODE_APPEND_UPDATE} PetscFileMode;$/;"	t	typeref:enum:__anon27
PetscFinalizeCalled	include/petscsys.h	/^PETSC_EXTERN PetscBool PetscFinalizeCalled;$/;"	v
PetscFlush	include/finclude/petscsysdef.h	194;"	d
PetscFortranAddr	include/finclude/petscsysdef.h	35;"	d
PetscFortranAddr	include/petsc-private/fortranimpl.h	/^typedef size_t PetscFortranAddr;$/;"	t
PetscFortranCallback	include/petsc-private/petscimpl.h	/^} PetscFortranCallback;$/;"	t	typeref:struct:__anon13
PetscFortranCallbackId	include/petsc-private/petscimpl.h	/^typedef int PetscFortranCallbackId;$/;"	t
PetscFortranCallbackType	include/petsc-private/petscimpl.h	/^typedef enum {PETSC_FORTRAN_CALLBACK_CLASS,PETSC_FORTRAN_CALLBACK_SUBTYPE,PETSC_FORTRAN_CALLBACK_MAXTYPE} PetscFortranCallbackType;$/;"	t	typeref:enum:__anon12
PetscFortranComplex	include/finclude/petscsysdef.h	92;"	d
PetscFortranDouble	include/finclude/petscsysdef.h	89;"	d
PetscFortranFloat	include/finclude/petscsysdef.h	88;"	d
PetscFortranInt	include/finclude/petscsysdef.h	49;"	d
PetscFortranLongDouble	include/finclude/petscsysdef.h	90;"	d
PetscFree	include/petscsys.h	846;"	d
PetscFree2	include/petscsys.h	895;"	d
PetscFree2	include/petscsys.h	897;"	d
PetscFree3	include/petscsys.h	924;"	d
PetscFree3	include/petscsys.h	926;"	d
PetscFree4	include/petscsys.h	954;"	d
PetscFree4	include/petscsys.h	956;"	d
PetscFree5	include/petscsys.h	985;"	d
PetscFree5	include/petscsys.h	987;"	d
PetscFree6	include/petscsys.h	1019;"	d
PetscFree6	include/petscsys.h	1021;"	d
PetscFree7	include/petscsys.h	1054;"	d
PetscFree7	include/petscsys.h	1056;"	d
PetscFreeVoid	include/petscsys.h	869;"	d
PetscFunctionBegin	include/petscerror.h	583;"	d
PetscFunctionBegin	include/petscerror.h	698;"	d
PetscFunctionBeginUser	include/petscerror.h	614;"	d
PetscFunctionBeginUser	include/petscerror.h	699;"	d
PetscFunctionList	include/petscsys.h	/^typedef struct _n_PetscFunctionList *PetscFunctionList;$/;"	t	typeref:struct:_n_PetscFunctionList
PetscFunctionListAdd	include/petscsys.h	1409;"	d
PetscFunctionListFind	include/petscsys.h	1412;"	d
PetscFunctionReturn	include/petscerror.h	685;"	d
PetscFunctionReturn	include/petscerror.h	700;"	d
PetscFunctionReturnVoid	include/petscerror.h	690;"	d
PetscFunctionReturnVoid	include/petscerror.h	701;"	d
PetscGetFlops	include/petsclog.h	418;"	d
PetscGlobalRank	include/petscsys.h	/^PETSC_EXTERN PetscMPIInt PetscGlobalRank;$/;"	v
PetscGlobalSize	include/petscsys.h	/^PETSC_EXTERN PetscMPIInt PetscGlobalSize;$/;"	v
PetscHDF5IntCast	include/petscviewerhdf5.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscHDF5IntCast(PetscInt a,hsize_t *b)$/;"	f
PetscHash	include/petscctable.h	/^PETSC_STATIC_INLINE unsigned long PetscHash(PetscTable ta,unsigned long x)$/;"	f
PetscHashPointer	include/petsc-private/petscfptimpl.h	/^PETSC_STATIC_INLINE unsigned long PetscHashPointer(void *ptr)$/;"	f
PetscHeaderCreate	include/petsc-private/petscimpl.h	147;"	d
PetscHeaderDestroy	include/petsc-private/petscimpl.h	170;"	d
PetscHelpPrintf	include/petscsys.h	/^PETSC_EXTERN PetscErrorCode (*PetscHelpPrintf)(MPI_Comm,const char[],...);$/;"	v
PetscICCLLAddSorted	include/petsc-private/matimpl.h	1071;"	d
PetscILULLAddSorted	include/petsc-private/matimpl.h	935;"	d
PetscImaginaryPart	include/finclude/petscsysdef.h	138;"	d
PetscImaginaryPart	include/petscmath.h	185;"	d
PetscImaginaryPart	include/petscmath.h	205;"	d
PetscImaginaryPartComplex	include/petscmath.h	108;"	d
PetscImaginaryPartComplex	include/petscmath.h	122;"	d
PetscImaginaryPartComplex	include/petscmath.h	137;"	d
PetscImaginaryPartComplex	include/petscmath.h	78;"	d
PetscIncompleteLLAdd	include/petsc-private/matimpl.h	979;"	d
PetscIncompleteLLAddSorted	include/petsc-private/matimpl.h	1024;"	d
PetscIncompleteLLClean	include/petsc-private/matimpl.h	1113;"	d
PetscIncompleteLLCreate	include/petsc-private/matimpl.h	871;"	d
PetscIncompleteLLDestroy	include/petsc-private/matimpl.h	1128;"	d
PetscIncompleteLLInit	include/petsc-private/matimpl.h	890;"	d
PetscInfo	include/petsclog.h	38;"	d
PetscInfo	include/petsclog.h	47;"	d
PetscInfo1	include/petsclog.h	39;"	d
PetscInfo1	include/petsclog.h	48;"	d
PetscInfo2	include/petsclog.h	40;"	d
PetscInfo2	include/petsclog.h	49;"	d
PetscInfo3	include/petsclog.h	41;"	d
PetscInfo3	include/petsclog.h	50;"	d
PetscInfo4	include/petsclog.h	42;"	d
PetscInfo4	include/petsclog.h	51;"	d
PetscInfo5	include/petsclog.h	43;"	d
PetscInfo5	include/petsclog.h	52;"	d
PetscInfo6	include/petsclog.h	44;"	d
PetscInfo6	include/petsclog.h	53;"	d
PetscInfo7	include/petsclog.h	45;"	d
PetscInfo7	include/petsclog.h	54;"	d
PetscInitializeCalled	include/petscsys.h	/^PETSC_EXTERN PetscBool PetscInitializeCalled;$/;"	v
PetscInt	include/finclude/petscsysdef.h	43;"	d
PetscInt	include/petscsys.h	/^typedef Petsc64bitInt PetscInt;$/;"	t
PetscIntStack	include/petsclog.h	/^typedef struct _n_PetscIntStack *PetscIntStack;$/;"	t	typeref:struct:_n_PetscIntStack
PetscKernelAXPY	include/petsc-private/kernels/petscaxpy.h	33;"	d
PetscKernelAXPY	include/petsc-private/kernels/petscaxpy.h	40;"	d
PetscKernelAXPY2	include/petsc-private/kernels/petscaxpy.h	34;"	d
PetscKernelAXPY2	include/petsc-private/kernels/petscaxpy.h	46;"	d
PetscKernelAXPY3	include/petsc-private/kernels/petscaxpy.h	35;"	d
PetscKernelAXPY3	include/petsc-private/kernels/petscaxpy.h	53;"	d
PetscKernelAXPY4	include/petsc-private/kernels/petscaxpy.h	36;"	d
PetscKernelAXPY4	include/petsc-private/kernels/petscaxpy.h	60;"	d
PetscKernel_A_gets_A_minus_B_times_C	include/petsc-private/kernels/blockinvert.h	149;"	d
PetscKernel_A_gets_A_minus_B_times_C	include/petsc-private/kernels/blockinvert.h	385;"	d
PetscKernel_A_gets_A_plus_Btranspose_times_C	include/petsc-private/kernels/blockinvert.h	164;"	d
PetscKernel_A_gets_A_plus_Btranspose_times_C	include/petsc-private/kernels/blockinvert.h	455;"	d
PetscKernel_A_gets_A_times_B	include/petsc-private/kernels/blockinvert.h	133;"	d
PetscKernel_A_gets_A_times_B	include/petsc-private/kernels/blockinvert.h	373;"	d
PetscKernel_A_gets_inverse_A	include/petsc-private/kernels/blockinvert.h	118;"	d
PetscKernel_A_gets_inverse_A_4_nopivot	include/petsc-private/kernels/blockinvert.h	27;"	d
PetscKernel_A_gets_transpose_A_BODY	include/petsc-private/kernels/blocktranspose.h	7;"	d
PetscKernel_A_gets_transpose_A_DECLARE	include/petsc-private/kernels/blocktranspose.h	22;"	d
PetscKernel_A_gets_transpose_A_N	include/petsc-private/kernels/blocktranspose.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscKernel_A_gets_transpose_A_N(MatScalar *a,PetscInt N)$/;"	f
PetscKernel_v_gets_A_times_w_1	include/petsc-private/kernels/blockmatmult.h	70;"	d
PetscKernel_v_gets_A_times_w_1_exp	include/petsc-private/kernels/blockmatmult.h	6;"	d
PetscKernel_v_gets_A_times_w_2	include/petsc-private/kernels/blockmatmult.h	71;"	d
PetscKernel_v_gets_A_times_w_2_exp	include/petsc-private/kernels/blockmatmult.h	11;"	d
PetscKernel_v_gets_A_times_w_3	include/petsc-private/kernels/blockmatmult.h	72;"	d
PetscKernel_v_gets_A_times_w_3_exp	include/petsc-private/kernels/blockmatmult.h	17;"	d
PetscKernel_v_gets_A_times_w_4	include/petsc-private/kernels/blockmatmult.h	73;"	d
PetscKernel_v_gets_A_times_w_4_exp	include/petsc-private/kernels/blockmatmult.h	24;"	d
PetscKernel_v_gets_A_times_w_4_exp	include/petsc-private/kernels/blockmatmult.h	32;"	d
PetscKernel_v_gets_A_times_w_5	include/petsc-private/kernels/blockmatmult.h	74;"	d
PetscKernel_v_gets_A_times_w_5_exp	include/petsc-private/kernels/blockmatmult.h	40;"	d
PetscKernel_v_gets_A_times_w_6	include/petsc-private/kernels/blockmatmult.h	75;"	d
PetscKernel_v_gets_A_times_w_6_exp	include/petsc-private/kernels/blockmatmult.h	49;"	d
PetscKernel_v_gets_A_times_w_7	include/petsc-private/kernels/blockmatmult.h	76;"	d
PetscKernel_v_gets_A_times_w_7_exp	include/petsc-private/kernels/blockmatmult.h	59;"	d
PetscKernel_v_gets_v_minus_A_times_w	include/petsc-private/kernels/blockinvert.h	196;"	d
PetscKernel_v_gets_v_minus_A_times_w	include/petsc-private/kernels/blockinvert.h	397;"	d
PetscKernel_v_gets_v_minus_A_times_w_1	include/petsc-private/kernels/blockmatmult.h	84;"	d
PetscKernel_v_gets_v_minus_A_times_w_2	include/petsc-private/kernels/blockmatmult.h	85;"	d
PetscKernel_v_gets_v_minus_A_times_w_3	include/petsc-private/kernels/blockmatmult.h	86;"	d
PetscKernel_v_gets_v_minus_A_times_w_4	include/petsc-private/kernels/blockmatmult.h	87;"	d
PetscKernel_v_gets_v_minus_A_times_w_5	include/petsc-private/kernels/blockmatmult.h	88;"	d
PetscKernel_v_gets_v_minus_A_times_w_6	include/petsc-private/kernels/blockmatmult.h	89;"	d
PetscKernel_v_gets_v_minus_A_times_w_7	include/petsc-private/kernels/blockmatmult.h	90;"	d
PetscKernel_v_gets_v_minus_transA_times_w	include/petsc-private/kernels/blockinvert.h	212;"	d
PetscKernel_v_gets_v_plus_A_times_w	include/petsc-private/kernels/blockinvert.h	228;"	d
PetscKernel_v_gets_v_plus_A_times_w	include/petsc-private/kernels/blockinvert.h	409;"	d
PetscKernel_v_gets_v_plus_A_times_w_1	include/petsc-private/kernels/blockmatmult.h	77;"	d
PetscKernel_v_gets_v_plus_A_times_w_2	include/petsc-private/kernels/blockmatmult.h	78;"	d
PetscKernel_v_gets_v_plus_A_times_w_3	include/petsc-private/kernels/blockmatmult.h	79;"	d
PetscKernel_v_gets_v_plus_A_times_w_4	include/petsc-private/kernels/blockmatmult.h	80;"	d
PetscKernel_v_gets_v_plus_A_times_w_5	include/petsc-private/kernels/blockmatmult.h	81;"	d
PetscKernel_v_gets_v_plus_A_times_w_6	include/petsc-private/kernels/blockmatmult.h	82;"	d
PetscKernel_v_gets_v_plus_A_times_w_7	include/petsc-private/kernels/blockmatmult.h	83;"	d
PetscKernel_v_gets_v_plus_Atranspose_times_w	include/petsc-private/kernels/blockinvert.h	180;"	d
PetscKernel_v_gets_v_plus_Atranspose_times_w	include/petsc-private/kernels/blockinvert.h	456;"	d
PetscKernel_w_gets_A_times_v	include/petsc-private/kernels/blockinvert.h	278;"	d
PetscKernel_w_gets_A_times_v	include/petsc-private/kernels/blockinvert.h	433;"	d
PetscKernel_w_gets_Ar_times_v	include/petsc-private/kernels/blockinvert.h	306;"	d
PetscKernel_w_gets_Ar_times_v	include/petsc-private/kernels/blockinvert.h	441;"	d
PetscKernel_w_gets_transA_times_v	include/petsc-private/kernels/blockinvert.h	294;"	d
PetscKernel_w_gets_w_minus_Ar_times_v	include/petsc-private/kernels/blockinvert.h	261;"	d
PetscKernel_w_gets_w_plus_Ar_times_v	include/petsc-private/kernels/blockinvert.h	244;"	d
PetscKernel_w_gets_w_plus_Ar_times_v	include/petsc-private/kernels/blockinvert.h	421;"	d
PetscKernel_w_gets_w_plus_trans_Ar_times_v	include/petsc-private/kernels/blockinvert.h	319;"	d
PetscKernel_w_gets_w_plus_trans_Ar_times_v	include/petsc-private/kernels/blockinvert.h	449;"	d
PetscLLAdd	include/petsc-private/matimpl.h	643;"	d
PetscLLAddPerm	include/petsc-private/matimpl.h	681;"	d
PetscLLAddSorted	include/petsc-private/matimpl.h	718;"	d
PetscLLAddSortedLU	include/petsc-private/matimpl.h	806;"	d
PetscLLAddSorted_new	include/petsc-private/matimpl.h	740;"	d
PetscLLClean	include/petsc-private/matimpl.h	844;"	d
PetscLLCondensedAddSorted	include/petsc-private/matimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscLLCondensedAddSorted(PetscInt nidx,const PetscInt indices[],PetscInt lnk[],PetscBT bt)$/;"	f
PetscLLCondensedAddSorted_Scalable	include/petsc-private/matimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscLLCondensedAddSorted_Scalable(PetscInt nidx,const PetscInt indices[],PetscInt lnk[])$/;"	f
PetscLLCondensedAddSorted_fast	include/petsc-private/matimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscLLCondensedAddSorted_fast(PetscInt nidx,const PetscInt indices[],PetscInt lnk[])$/;"	f
PetscLLCondensedClean	include/petsc-private/matimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscLLCondensedClean(PetscInt lnk_max,PetscInt nidx,PetscInt *indices,PetscInt lnk[],PetscBT bt)$/;"	f
PetscLLCondensedClean_Scalable	include/petsc-private/matimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscLLCondensedClean_Scalable(PetscInt nidx,PetscInt *indices,PetscInt *lnk)$/;"	f
PetscLLCondensedClean_fast	include/petsc-private/matimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscLLCondensedClean_fast(PetscInt nidx,PetscInt *indices,PetscInt *lnk)$/;"	f
PetscLLCondensedCreate	include/petsc-private/matimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscLLCondensedCreate(PetscInt nlnk_max,PetscInt lnk_max,PetscInt **lnk,PetscBT *bt)$/;"	f
PetscLLCondensedCreate_Scalable	include/petsc-private/matimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscLLCondensedCreate_Scalable(PetscInt nlnk_max,PetscInt **lnk)$/;"	f
PetscLLCondensedCreate_fast	include/petsc-private/matimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscLLCondensedCreate_fast(PetscInt nlnk_max,PetscInt **lnk)$/;"	f
PetscLLCondensedDestroy	include/petsc-private/matimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscLLCondensedDestroy(PetscInt *lnk,PetscBT bt)$/;"	f
PetscLLCondensedDestroy_Scalable	include/petsc-private/matimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscLLCondensedDestroy_Scalable(PetscInt *lnk)$/;"	f
PetscLLCondensedDestroy_fast	include/petsc-private/matimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscLLCondensedDestroy_fast(PetscInt *lnk)$/;"	f
PetscLLCondensedView	include/petsc-private/matimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscLLCondensedView(PetscInt *lnk)$/;"	f
PetscLLCondensedView_fast	include/petsc-private/matimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscLLCondensedView_fast(PetscInt *lnk)$/;"	f
PetscLLCreate	include/petsc-private/matimpl.h	624;"	d
PetscLLCreate_new	include/petsc-private/matimpl.h	627;"	d
PetscLLDestroy	include/petsc-private/matimpl.h	857;"	d
PetscLayout	include/finclude/petscisdef.h	17;"	d
PetscLayout	include/petscis.h	/^typedef struct _n_PetscLayout* PetscLayout;$/;"	t	typeref:struct:_n_PetscLayout
PetscLayoutFindOwner	include/petscis.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscLayoutFindOwner(PetscLayout map,PetscInt idx,PetscInt *owner)$/;"	f
PetscLayoutFindOwnerIndex	include/petscis.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscLayoutFindOwnerIndex(PetscLayout map,PetscInt idx,PetscInt *owner, PetscInt *lidx)$/;"	f
PetscLikely	include/petscsys.h	305;"	d
PetscLikely	include/petscsys.h	308;"	d
PetscLogActions	include/petsclog.h	443;"	d
PetscLogAllBegin	include/petsclog.h	439;"	d
PetscLogBegin	include/petsclog.h	436;"	d
PetscLogComplex	include/petscmath.h	114;"	d
PetscLogComplex	include/petscmath.h	128;"	d
PetscLogComplex	include/petscmath.h	143;"	d
PetscLogComplex	include/petscmath.h	84;"	d
PetscLogDestroy	include/petsclog.h	428;"	d
PetscLogDouble	include/finclude/petscsysdef.h	176;"	d
PetscLogDouble	include/petscsys.h	/^typedef double PetscLogDouble;$/;"	t
PetscLogDump	include/petsclog.h	440;"	d
PetscLogEvent	include/finclude/petscsysdef.h	73;"	d
PetscLogEvent	include/petsclog.h	/^typedef int PetscLogEvent;$/;"	t
PetscLogEventActivate	include/petsclog.h	407;"	d
PetscLogEventActivateClass	include/petsclog.h	410;"	d
PetscLogEventBarrierBegin	include/petsclog.h	280;"	d
PetscLogEventBarrierBegin	include/petsclog.h	421;"	d
PetscLogEventBarrierEnd	include/petsclog.h	289;"	d
PetscLogEventBarrierEnd	include/petsclog.h	422;"	d
PetscLogEventBegin	include/petsclog.h	285;"	d
PetscLogEventBegin	include/petsclog.h	419;"	d
PetscLogEventDeactivate	include/petsclog.h	408;"	d
PetscLogEventDeactivateClass	include/petsclog.h	411;"	d
PetscLogEventEnd	include/petsclog.h	291;"	d
PetscLogEventEnd	include/petsclog.h	420;"	d
PetscLogEventRegister	include/petsclog.h	441;"	d
PetscLogEventSetActiveAll	include/petsclog.h	412;"	d
PetscLogFlops	include/petsclog.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscLogFlops(PetscLogDouble n)$/;"	f
PetscLogFlops	include/petsclog.h	405;"	d
PetscLogObjectCreate	include/petsclog.h	224;"	d
PetscLogObjectCreate	include/petsclog.h	425;"	d
PetscLogObjectDestroy	include/petsclog.h	225;"	d
PetscLogObjectDestroy	include/petsclog.h	426;"	d
PetscLogObjectMemory	include/petsclog.h	226;"	d
PetscLogObjectMemory	include/petsclog.h	427;"	d
PetscLogObjectParent	include/petsclog.h	220;"	d
PetscLogObjectParent	include/petsclog.h	423;"	d
PetscLogObjectParents	include/petsclog.h	223;"	d
PetscLogObjectParents	include/petsclog.h	424;"	d
PetscLogObjects	include/petsclog.h	442;"	d
PetscLogPHC	include/petsclog.h	/^PETSC_EXTERN PetscErrorCode (*PetscLogPHC)(PetscObject);$/;"	v
PetscLogPHC	include/petsclog.h	416;"	d
PetscLogPHD	include/petsclog.h	/^PETSC_EXTERN PetscErrorCode (*PetscLogPHD)(PetscObject);$/;"	v
PetscLogPHD	include/petsclog.h	417;"	d
PetscLogPLB	include/petsclog.h	/^PETSC_EXTERN PetscErrorCode (*PetscLogPLB)(PetscLogEvent,int,PetscObject,PetscObject,PetscObject,PetscObject);$/;"	v
PetscLogPLB	include/petsclog.h	414;"	d
PetscLogPLE	include/petsclog.h	/^PETSC_EXTERN PetscErrorCode (*PetscLogPLE)(PetscLogEvent,int,PetscObject,PetscObject,PetscObject,PetscObject);$/;"	v
PetscLogPLE	include/petsclog.h	415;"	d
PetscLogPrintDetailed	include/petsclog.h	435;"	d
PetscLogPrintInfo	include/petsclog.h	/^PETSC_EXTERN PetscBool PetscLogPrintInfo;  \/* if true, indicates PetscInfo() is turned on *\/$/;"	v
PetscLogReal	include/petscmath.h	30;"	d
PetscLogReal	include/petscmath.h	39;"	d
PetscLogReal	include/petscmath.h	56;"	d
PetscLogScalar	include/petscmath.h	191;"	d
PetscLogScalar	include/petscmath.h	212;"	d
PetscLogScalar	include/petscmath.h	219;"	d
PetscLogSet	include/petsclog.h	438;"	d
PetscLogStage	bin/matlab/classes/matlabheader.h	/^typedef int PetscLogStage;$/;"	t
PetscLogStage	include/finclude/petscsysdef.h	74;"	d
PetscLogStage	include/petsclog.h	/^typedef int PetscLogStage;$/;"	t
PetscLogStageGetActive	include/petsclog.h	452;"	d
PetscLogStageGetId	include/petsclog.h	450;"	d
PetscLogStageGetVisible	include/petsclog.h	453;"	d
PetscLogStagePop	include/petsclog.h	430;"	d
PetscLogStagePrint	include/petsclog.h	432;"	d
PetscLogStagePush	include/petsclog.h	429;"	d
PetscLogStageRegister	include/petsclog.h	431;"	d
PetscLogStageSetActive	include/petsclog.h	451;"	d
PetscLogStageSetVisible	include/petsclog.h	454;"	d
PetscLogTraceBegin	include/petsclog.h	437;"	d
PetscLogView	include/petsclog.h	433;"	d
PetscLogViewPython	include/petsclog.h	434;"	d
PetscMPIInt	include/finclude/petscsysdef.h	63;"	d
PetscMPIInt	include/petscsys.h	/^typedef int PetscMPIInt;$/;"	t
PetscMPIIntCast	include/petscsys.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscMPIIntCast(PetscInt a,PetscMPIInt *b)$/;"	f
PetscMPITypeSize	include/petsclog.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscMPITypeSize(PetscLogDouble *buff,PetscMPIInt count,MPI_Datatype type)$/;"	f
PetscMPITypeSizeComm	include/petsclog.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscMPITypeSizeComm(MPI_Comm comm, PetscLogDouble *buff,PetscMPIInt *counts,MPI_Datatype type)$/;"	f
PetscMalloc	include/petscsys.h	506;"	d
PetscMalloc2	include/petscsys.h	555;"	d
PetscMalloc2	include/petscsys.h	557;"	d
PetscMalloc3	include/petscsys.h	590;"	d
PetscMalloc3	include/petscsys.h	592;"	d
PetscMalloc4	include/petscsys.h	629;"	d
PetscMalloc4	include/petscsys.h	631;"	d
PetscMalloc5	include/petscsys.h	672;"	d
PetscMalloc5	include/petscsys.h	674;"	d
PetscMalloc6	include/petscsys.h	719;"	d
PetscMalloc6	include/petscsys.h	721;"	d
PetscMalloc7	include/petscsys.h	768;"	d
PetscMalloc7	include/petscsys.h	770;"	d
PetscMatStashSpace	include/petsc-private/matimpl.h	/^typedef struct _MatStashSpace *PetscMatStashSpace;$/;"	t	typeref:struct:_MatStashSpace
PetscMatlabEngine	include/finclude/petscsysdef.h	190;"	d
PetscMatlabEngine	include/petscmatlab.h	/^typedef struct _p_PetscMatlabEngine* PetscMatlabEngine;$/;"	t	typeref:struct:_p_PetscMatlabEngine
PetscMax	include/petscmath.h	286;"	d
PetscMaxSum_Op	include/petscsys.h	/^PETSC_EXTERN MPI_Op PetscMaxSum_Op;$/;"	v
PetscMemcpy	include/petscsys.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscMemcpy(void *a,const void *b,size_t n)$/;"	f
PetscMemoryBarrier	include/petsc-private/threadcommimpl.h	43;"	d
PetscMemoryBarrier	include/petsc-private/threadcommimpl.h	45;"	d
PetscMemzero	include/petscsys.h	/^PETSC_STATIC_INLINE PetscErrorCode  PetscMemzero(void *a,size_t n)$/;"	f
PetscMin	include/petscmath.h	264;"	d
PetscNew	include/petscsys.h	797;"	d
PetscNewLog	include/petscsys.h	823;"	d
PetscNot	include/petscsys.h	1456;"	d
PetscObject	bin/matlab/classes/matlabheader.h	/^typedef PetscPointer PetscObject;$/;"	t
PetscObject	include/finclude/petscsysdef.h	175;"	d
PetscObject	include/petscsys.h	/^typedef struct _p_PetscObject* PetscObject;$/;"	t	typeref:struct:_p_PetscObject
PetscObjectAMSBlock	include/petscsys.h	1364;"	d
PetscObjectAMSGrantAccess	include/petscsys.h	1365;"	d
PetscObjectAMSSetBlock	include/petscsys.h	1363;"	d
PetscObjectAMSTakeAccess	include/petscsys.h	1366;"	d
PetscObjectAMSViewOff	include/petscsys.h	1362;"	d
PetscObjectAllocateFortranPointers	include/petsc-private/fortranimpl.h	200;"	d
PetscObjectComposeFunction	include/petscsys.h	1320;"	d
PetscObjectComposedDataGetInt	include/petsc-private/petscimpl.h	484;"	d
PetscObjectComposedDataGetIntstar	include/petsc-private/petscimpl.h	534;"	d
PetscObjectComposedDataGetReal	include/petsc-private/petscimpl.h	583;"	d
PetscObjectComposedDataGetRealstar	include/petsc-private/petscimpl.h	633;"	d
PetscObjectComposedDataGetScalar	include/petsc-private/petscimpl.h	687;"	d
PetscObjectComposedDataGetScalar	include/petsc-private/petscimpl.h	691;"	d
PetscObjectComposedDataGetScalarstar	include/petsc-private/petscimpl.h	746;"	d
PetscObjectComposedDataGetScalarstar	include/petsc-private/petscimpl.h	750;"	d
PetscObjectComposedDataMax	include/petsc-private/petscimpl.h	/^PETSC_EXTERN PetscInt         PetscObjectComposedDataMax;$/;"	v
PetscObjectComposedDataSetInt	include/petsc-private/petscimpl.h	459;"	d
PetscObjectComposedDataSetIntstar	include/petsc-private/petscimpl.h	508;"	d
PetscObjectComposedDataSetReal	include/petsc-private/petscimpl.h	558;"	d
PetscObjectComposedDataSetRealstar	include/petsc-private/petscimpl.h	607;"	d
PetscObjectComposedDataSetScalar	include/petsc-private/petscimpl.h	658;"	d
PetscObjectComposedDataSetScalar	include/petsc-private/petscimpl.h	662;"	d
PetscObjectComposedDataSetScalarstar	include/petsc-private/petscimpl.h	716;"	d
PetscObjectComposedDataSetScalarstar	include/petsc-private/petscimpl.h	720;"	d
PetscObjectFunction	include/petsc-private/petscimpl.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscObjectFunction)(PetscObject*); \/* force cast in next macro to NEVER use extern "C" style *\/$/;"	t
PetscObjectList	include/petscsys.h	/^typedef struct _n_PetscObjectList *PetscObjectList;$/;"	t	typeref:struct:_n_PetscObjectList
PetscObjectOptionsBegin	include/petscoptions.h	134;"	d
PetscObjectQueryFunction	include/petscsys.h	1335;"	d
PetscObjectStateDecrease	include/petsc-private/petscimpl.h	427;"	d
PetscObjectStateIncrease	include/petsc-private/petscimpl.h	398;"	d
PetscObjectUseFortranCallback	include/petsc-private/fortranimpl.h	217;"	d
PetscObjectUseFortranCallbackSubType	include/petsc-private/fortranimpl.h	218;"	d
PetscObjectUseFortranCallback_Private	include/petsc-private/fortranimpl.h	209;"	d
PetscObjectViewerFunction	include/petsc-private/petscimpl.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscObjectViewerFunction)(PetscObject,PetscViewer);$/;"	t
PetscOffset	include/finclude/petscsysdef.h	36;"	d
PetscOps	include/petsc-private/petscimpl.h	/^} PetscOps;$/;"	t	typeref:struct:__anon11
PetscOptionType	include/petscoptions.h	/^typedef enum {OPTION_INT,OPTION_LOGICAL,OPTION_REAL,OPTION_LIST,OPTION_STRING,OPTION_REAL_ARRAY,OPTION_HEAD,OPTION_INT_ARRAY,OPTION_ELIST,OPTION_LOGICAL_ARRAY,OPTION_STRING_ARRAY} PetscOptionType;$/;"	t	typeref:enum:__anon34
PetscOptions	include/petscoptions.h	/^typedef struct _n_PetscOptions* PetscOptions;$/;"	t	typeref:struct:_n_PetscOptions
PetscOptionsBegin	include/petscoptions.h	103;"	d
PetscOptionsEnd	include/petscoptions.h	161;"	d
PetscOptionsObjectType	include/petscoptions.h	/^} PetscOptionsObjectType;$/;"	t	typeref:struct:__anon35
PetscOptionsPublish	include/petscoptions.h	/^PETSC_EXTERN PetscBool PetscOptionsPublish;$/;"	v
PetscOptionsPublishCount	include/petscoptions.h	/^PETSC_EXTERN PetscInt PetscOptionsPublishCount;$/;"	v
PetscOptionsTail	include/petscoptions.h	199;"	d
PetscPatchDefaultViewers_Fortran	include/petsc-private/fortranimpl.h	168;"	d
PetscPatchDefaultViewers_Fortran_Socket	include/petsc-private/fortranimpl.h	159;"	d
PetscPatchDefaultViewers_Fortran_Socket	include/petsc-private/fortranimpl.h	165;"	d
PetscPointer	bin/matlab/classes/matlabheader.h	/^typedef long int PetscPointer;$/;"	t
PetscPowComplex	include/petscmath.h	112;"	d
PetscPowComplex	include/petscmath.h	126;"	d
PetscPowComplex	include/petscmath.h	141;"	d
PetscPowComplex	include/petscmath.h	82;"	d
PetscPowInt	include/petscmath.h	/^PETSC_STATIC_INLINE PetscInt PetscPowInt(PetscInt base,PetscInt power) {$/;"	f
PetscPowReal	include/petscmath.h	33;"	d
PetscPowReal	include/petscmath.h	42;"	d
PetscPowReal	include/petscmath.h	59;"	d
PetscPowRealInt	include/petscmath.h	/^PETSC_STATIC_INLINE PetscReal PetscPowRealInt(PetscReal base,PetscInt power) {$/;"	f
PetscPowScalar	include/petscmath.h	189;"	d
PetscPowScalar	include/petscmath.h	210;"	d
PetscPowScalar	include/petscmath.h	217;"	d
PetscPreLoadBegin	include/petsclog.h	470;"	d
PetscPreLoadEnd	include/petsclog.h	490;"	d
PetscPreLoadStage	include/petsclog.h	496;"	d
PetscPreLoadingOn	include/petsclog.h	/^PETSC_EXTERN PetscBool PetscPreLoadingOn;         \/* true if we are currently in a preloading calculation *\/$/;"	v
PetscPreLoadingUsed	include/petsclog.h	/^PETSC_EXTERN PetscBool PetscPreLoadingUsed;       \/* true if we are or have done preloading *\/$/;"	v
PetscPrecision	include/petscsys.h	/^typedef enum { PETSC_PRECISION_SINGLE=4,PETSC_PRECISION_DOUBLE=8 } PetscPrecision;$/;"	t	typeref:enum:__anon23
PetscPrecisions	include/petscsys.h	/^PETSC_EXTERN const char *PetscPrecisions[];$/;"	v
PetscPrefetchBlock	include/petscsys.h	1739;"	d
PetscQuadrature	include/petscdm.h	/^} PetscQuadrature;$/;"	t	typeref:struct:__anon19
PetscRandom	include/finclude/petscsysdef.h	202;"	d
PetscRandom	include/petscsys.h	/^typedef struct _p_PetscRandom*   PetscRandom;$/;"	t	typeref:struct:_p_PetscRandom
PetscRandomList	include/petscsys.h	/^PETSC_EXTERN PetscFunctionList PetscRandomList;$/;"	v
PetscRandomRegisterAllCalled	include/petscsys.h	/^PETSC_EXTERN PetscBool         PetscRandomRegisterAllCalled;$/;"	v
PetscRandomType	include/finclude/petscsysdef.h	203;"	d
PetscRandomType	include/petscsys.h	/^typedef const char* PetscRandomType;$/;"	t
PetscReadExodusII	src/dm/impls/mesh/meshexodus.c	/^PetscErrorCode PetscReadExodusII(MPI_Comm comm, const char filename[], ALE::Obj<PETSC_MESH_TYPE>& mesh)$/;"	f
PetscReadMemoryBarrier	include/petsc-private/threadcommimpl.h	48;"	d
PetscReadMemoryBarrier	include/petsc-private/threadcommimpl.h	50;"	d
PetscReadOnce	include/petsc-private/threadcommimpl.h	40;"	d
PetscReal	include/finclude/petscsysdef.h	158;"	d
PetscReal	include/petscmath.h	/^typedef __float128 PetscReal;$/;"	t
PetscReal	include/petscmath.h	/^typedef double PetscReal;$/;"	t
PetscReal	include/petscmath.h	/^typedef float PetscReal;$/;"	t
PetscRealPart	include/finclude/petscsysdef.h	136;"	d
PetscRealPart	include/petscmath.h	184;"	d
PetscRealPart	include/petscmath.h	204;"	d
PetscRealPartComplex	include/petscmath.h	107;"	d
PetscRealPartComplex	include/petscmath.h	121;"	d
PetscRealPartComplex	include/petscmath.h	136;"	d
PetscRealPartComplex	include/petscmath.h	77;"	d
PetscRegister__FUNCT__	include/petscerror.h	629;"	d
PetscRegister__FUNCT__	include/petscerror.h	636;"	d
PetscRunKernel	include/petsc-private/threadcommimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscRunKernel(PetscInt trank,PetscInt nargs,PetscThreadCommJobCtx job)$/;"	f
PetscSF	include/finclude/petscisdef.h	16;"	d
PetscSF	include/petscsftypes.h	/^typedef struct _p_PetscSF* PetscSF;$/;"	t	typeref:struct:_p_PetscSF
PetscSFCreateSectionSF	src/dm/impls/mesh/examples/tests/ex2.c	/^PetscErrorCode PetscSFCreateSectionSF(PetscSF sf, PetscSection section, PetscSF *sectionSF)$/;"	f
PetscSFDuplicateOption	include/petscsf.h	/^typedef enum {PETSCSF_DUPLICATE_CONFONLY,PETSCSF_DUPLICATE_RANKS,PETSCSF_DUPLICATE_GRAPH} PetscSFDuplicateOption;$/;"	t	typeref:enum:__anon8
PetscSFDuplicateOptions	include/petscsf.h	/^PETSC_EXTERN const char *const PetscSFDuplicateOptions[];$/;"	v
PetscSFList	include/petscsf.h	/^PETSC_EXTERN PetscFunctionList PetscSFList;$/;"	v
PetscSFNode	include/petscsf.h	/^} PetscSFNode;$/;"	t	typeref:struct:__anon6
PetscSFRegisterAllCalled	include/petsc-private/sfimpl.h	/^PETSC_EXTERN PetscBool PetscSFRegisterAllCalled;$/;"	v
PetscSFType	include/petscsf.h	/^typedef const char *PetscSFType;$/;"	t
PetscSFWindowSyncType	include/petscsf.h	/^typedef enum {PETSCSF_WINDOW_SYNC_FENCE,PETSCSF_WINDOW_SYNC_LOCK,PETSCSF_WINDOW_SYNC_ACTIVE} PetscSFWindowSyncType;$/;"	t	typeref:enum:__anon7
PetscSFWindowSyncTypes	include/petscsf.h	/^PETSC_EXTERN const char *const PetscSFWindowSyncTypes[];$/;"	v
PetscScalar	include/finclude/petscsysdef.h	131;"	d
PetscScalar	include/petscmath.h	/^typedef PetscComplex PetscScalar;$/;"	t
PetscScalar	include/petscmath.h	/^typedef PetscReal PetscScalar;$/;"	t
PetscScalarPrecision	include/petscmath.h	/^typedef enum { PETSC_SCALAR_DOUBLE,PETSC_SCALAR_SINGLE, PETSC_SCALAR_LONG_DOUBLE } PetscScalarPrecision;$/;"	t	typeref:enum:__anon60
PetscSection	include/finclude/petscisdef.h	13;"	d
PetscSection	include/petscis.h	/^typedef struct _p_PetscSection *PetscSection;$/;"	t	typeref:struct:_p_PetscSection
PetscSegBuffer	include/petscsys.h	/^typedef struct _n_PetscSegBuffer *PetscSegBuffer;$/;"	t	typeref:struct:_n_PetscSegBuffer
PetscSegBufferGetInts	include/petscsys.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscSegBufferGetInts(PetscSegBuffer seg,PetscInt count,PetscInt *PETSC_RESTRICT *slot) {return PetscSegBufferGet(seg,count,(void**)slot);}$/;"	f
PetscSign	include/petscmath.h	226;"	d
PetscSinComplex	include/petscmath.h	115;"	d
PetscSinComplex	include/petscmath.h	129;"	d
PetscSinComplex	include/petscmath.h	144;"	d
PetscSinComplex	include/petscmath.h	85;"	d
PetscSinReal	include/petscmath.h	31;"	d
PetscSinReal	include/petscmath.h	40;"	d
PetscSinReal	include/petscmath.h	57;"	d
PetscSinScalar	include/petscmath.h	192;"	d
PetscSinScalar	include/petscmath.h	213;"	d
PetscSinScalar	include/petscmath.h	220;"	d
PetscSizeT	include/finclude/petscsysdef.h	55;"	d
PetscSqr	include/petscmath.h	369;"	d
PetscSqrtComplex	include/petscmath.h	111;"	d
PetscSqrtComplex	include/petscmath.h	125;"	d
PetscSqrtComplex	include/petscmath.h	140;"	d
PetscSqrtComplex	include/petscmath.h	81;"	d
PetscSqrtReal	include/petscmath.h	28;"	d
PetscSqrtReal	include/petscmath.h	37;"	d
PetscSqrtReal	include/petscmath.h	54;"	d
PetscSqrtScalar	include/petscmath.h	188;"	d
PetscSqrtScalar	include/petscmath.h	209;"	d
PetscSqrtScalar	include/petscmath.h	216;"	d
PetscStack	include/petscerror.h	/^} PetscStack;$/;"	t	typeref:struct:__anon13
PetscStackAMSGrantAccess	include/petscsys.h	1370;"	d
PetscStackAMSTakeAccess	include/petscsys.h	1369;"	d
PetscStackAMSViewOff	include/petscsys.h	1368;"	d
PetscStackActive	include/petscerror.h	/^PETSC_STATIC_INLINE PetscBool PetscStackActive(void)$/;"	f
PetscStackActive	include/petscerror.h	704;"	d
PetscStackCall	include/petscerror.h	722;"	d
PetscStackCallAMS	include/petscviewerams.h	15;"	d
PetscStackCallBLAS	include/petscblaslapack.h	13;"	d
PetscStackCallStandard	include/petscerror.h	736;"	d
PetscStackPop	include/petscerror.h	653;"	d
PetscStackPop	include/petscerror.h	702;"	d
PetscStackPopNoCheck	include/petscerror.h	542;"	d
PetscStackPopNoCheck	include/petscerror.h	697;"	d
PetscStackPush	include/petscerror.h	647;"	d
PetscStackPush	include/petscerror.h	703;"	d
PetscStackPushNoCheck	include/petscerror.h	526;"	d
PetscStackPushNoCheck	include/petscerror.h	696;"	d
PetscStackViewAMS	include/petscsys.h	1367;"	d
PetscStageInfo	include/petsclog.h	/^} PetscStageInfo;$/;"	t	typeref:struct:_PetscStageInfo
PetscStageLog	include/petsclog.h	/^typedef struct _n_PetscStageLog *PetscStageLog;$/;"	t	typeref:struct:_n_PetscStageLog
PetscStringize	include/petscerror.h	82;"	d
PetscStringizeArg	include/petscerror.h	81;"	d
PetscSubcomm	include/petscsys.h	/^typedef struct _n_PetscSubcomm* PetscSubcomm;$/;"	t	typeref:struct:_n_PetscSubcomm
PetscSubcommType	include/petscsys.h	/^typedef enum {PETSC_SUBCOMM_GENERAL=0,PETSC_SUBCOMM_CONTIGUOUS=1,PETSC_SUBCOMM_INTERLACED=2} PetscSubcommType;$/;"	t	typeref:enum:__anon32
PetscSubcommTypes	include/petscsys.h	/^PETSC_EXTERN const char *const PetscSubcommTypes[];$/;"	v
PetscTable	include/petscctable.h	/^typedef struct _n_PetscTable* PetscTable;$/;"	t	typeref:struct:_n_PetscTable
PetscTableAdd	include/petscctable.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscTableAdd(PetscTable ta,PetscInt key,PetscInt data,InsertMode imode)$/;"	f
PetscTableAddCount	include/petscctable.h	/^PETSC_STATIC_INLINE PetscErrorCode  PetscTableAddCount(PetscTable ta,PetscInt key)$/;"	f
PetscTableFind	include/petscctable.h	/^PETSC_STATIC_INLINE PetscErrorCode  PetscTableFind(PetscTable ta,PetscInt key,PetscInt *data)$/;"	f
PetscTablePosition	include/petscctable.h	/^typedef PetscInt* PetscTablePosition;$/;"	t
PetscThreadComm	include/petscthreadcomm.h	/^typedef struct _p_PetscThreadComm *PetscThreadComm;$/;"	t	typeref:struct:_p_PetscThreadComm
PetscThreadCommJobCtx	include/petsc-private/threadcommimpl.h	/^typedef struct _p_PetscThreadCommJobCtx* PetscThreadCommJobCtx;$/;"	t	typeref:struct:_p_PetscThreadCommJobCtx
PetscThreadCommJobQueue	include/petsc-private/threadcommimpl.h	/^typedef struct _p_PetscThreadCommJobQueue* PetscThreadCommJobQueue;$/;"	t	typeref:struct:_p_PetscThreadCommJobQueue
PetscThreadCommList	include/petscthreadcomm.h	/^PETSC_EXTERN PetscFunctionList PetscThreadCommList;$/;"	v
PetscThreadCommOps	include/petsc-private/threadcommimpl.h	/^typedef struct _PetscThreadCommOps* PetscThreadCommOps;$/;"	t	typeref:struct:_PetscThreadCommOps
PetscThreadCommRedCtx	include/petsc-private/threadcommimpl.h	/^typedef struct _p_PetscThreadCommRedCtx *PetscThreadCommRedCtx;$/;"	t	typeref:struct:_p_PetscThreadCommRedCtx
PetscThreadCommReduction	include/petscthreadcomm.h	/^typedef struct _p_PetscThreadCommReduction *PetscThreadCommReduction;$/;"	t	typeref:struct:_p_PetscThreadCommReduction
PetscThreadCommReductionOp	include/petscthreadcomm.h	/^typedef enum {THREADCOMM_SUM,THREADCOMM_PROD,THREADCOMM_MAX,THREADCOMM_MIN,THREADCOMM_MAXLOC,THREADCOMM_MINLOC} PetscThreadCommReductionOp;$/;"	t	typeref:enum:__anon33
PetscThreadCommReductionOps	include/petscthreadcomm.h	/^PETSC_EXTERN const char* const PetscThreadCommReductionOps[];$/;"	v
PetscThreadCommType	include/petscthreadcomm.h	/^typedef const char* PetscThreadCommType;$/;"	t
PetscThreadKernel	include/petscthreadcomm.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*PetscThreadKernel)(PetscInt,...);$/;"	t
PetscThreadKey	include/petscerror.h	/^typedef pthread_key_t PetscThreadKey;$/;"	t
PetscThreadKey	include/petscerror.h	/^typedef void* PetscThreadKey;$/;"	t
PetscThreadLocalDestroy	include/petscerror.h	/^PETSC_STATIC_INLINE void PetscThreadLocalDestroy(PETSC_UNUSED PetscThreadKey key)$/;"	f
PetscThreadLocalDestroy	include/petscerror.h	/^PETSC_STATIC_INLINE void PetscThreadLocalDestroy(PetscThreadKey key)$/;"	f
PetscThreadLocalGetValue	include/petscerror.h	/^PETSC_STATIC_INLINE void* PetscThreadLocalGetValue(PetscThreadKey key)$/;"	f
PetscThreadLocalRegister	include/petscerror.h	/^PETSC_STATIC_INLINE void PetscThreadLocalRegister(PETSC_UNUSED PetscThreadKey *key)$/;"	f
PetscThreadLocalRegister	include/petscerror.h	/^PETSC_STATIC_INLINE void PetscThreadLocalRegister(PetscThreadKey *key)$/;"	f
PetscThreadLocalSetValue	include/petscerror.h	/^PETSC_STATIC_INLINE void PetscThreadLocalSetValue(PetscThreadKey *key,void* value)$/;"	f
PetscTime	include/petsctime.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscTime(PetscLogDouble *v)$/;"	f
PetscTimeAdd	include/petsctime.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscTimeAdd(PetscLogDouble *v)$/;"	f
PetscTimeSubtract	include/petsctime.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscTimeSubtract(PetscLogDouble *v)$/;"	f
PetscToken	include/petscsys.h	/^typedef struct _p_PetscToken* PetscToken;$/;"	t	typeref:struct:_p_PetscToken
PetscTrFree	include/petscsys.h	/^PETSC_EXTERN PetscErrorCode (*PetscTrFree)(void*,int,const char[],const char[],const char[]);$/;"	v
PetscTrMalloc	include/petscsys.h	/^PETSC_EXTERN PetscErrorCode (*PetscTrMalloc)(size_t,int,const char[],const char[],const char[],void**);$/;"	v
PetscTryMethod	include/petsc-private/petscimpl.h	345;"	d
PetscUniformSection	include/petsc-private/isimpl.h	/^typedef struct _n_PetscUniformSection *PetscUniformSection;$/;"	t	typeref:struct:_n_PetscUniformSection
PetscUnit	include/petscdm.h	/^typedef enum {PETSC_UNIT_LENGTH, PETSC_UNIT_MASS, PETSC_UNIT_TIME, PETSC_UNIT_CURRENT, PETSC_UNIT_TEMPERATURE, PETSC_UNIT_AMOUNT, PETSC_UNIT_LUMINOSITY, NUM_PETSC_UNITS} PetscUnit;$/;"	t	typeref:enum:__anon21
PetscUnlikely	include/petscsys.h	304;"	d
PetscUnlikely	include/petscsys.h	307;"	d
PetscUseMethod	include/petsc-private/petscimpl.h	359;"	d
PetscVFPrintf	include/petscsys.h	/^PETSC_EXTERN PetscErrorCode (*PetscVFPrintf)(FILE*,const char[],va_list);$/;"	v
PetscValidCharPointer	include/petsc-private/petscimpl.h	192;"	d
PetscValidCharPointer	include/petsc-private/petscimpl.h	223;"	d
PetscValidHeader	include/petsc-private/petscimpl.h	190;"	d
PetscValidHeader	include/petsc-private/petscimpl.h	209;"	d
PetscValidHeaderSpecific	include/petsc-private/petscimpl.h	189;"	d
PetscValidHeaderSpecific	include/petsc-private/petscimpl.h	199;"	d
PetscValidIntPointer	include/petsc-private/petscimpl.h	193;"	d
PetscValidIntPointer	include/petsc-private/petscimpl.h	229;"	d
PetscValidLogicalCollectiveBool	include/petsc-private/petscimpl.h	258;"	d
PetscValidLogicalCollectiveBool	include/petsc-private/petscimpl.h	317;"	d
PetscValidLogicalCollectiveEnum	include/petsc-private/petscimpl.h	259;"	d
PetscValidLogicalCollectiveEnum	include/petsc-private/petscimpl.h	326;"	d
PetscValidLogicalCollectiveInt	include/petsc-private/petscimpl.h	257;"	d
PetscValidLogicalCollectiveInt	include/petsc-private/petscimpl.h	308;"	d
PetscValidLogicalCollectiveReal	include/petsc-private/petscimpl.h	256;"	d
PetscValidLogicalCollectiveReal	include/petsc-private/petscimpl.h	299;"	d
PetscValidLogicalCollectiveScalar	include/petsc-private/petscimpl.h	255;"	d
PetscValidLogicalCollectiveScalar	include/petsc-private/petscimpl.h	290;"	d
PetscValidPointer	include/petsc-private/petscimpl.h	191;"	d
PetscValidPointer	include/petsc-private/petscimpl.h	217;"	d
PetscValidRealPointer	include/petsc-private/petscimpl.h	195;"	d
PetscValidRealPointer	include/petsc-private/petscimpl.h	241;"	d
PetscValidScalarPointer	include/petsc-private/petscimpl.h	194;"	d
PetscValidScalarPointer	include/petsc-private/petscimpl.h	235;"	d
PetscValidType	include/petsc-private/petscimpl.h	252;"	d
PetscValidType	include/petsc-private/petscimpl.h	272;"	d
PetscViewer	bin/matlab/classes/matlabheader.h	/^typedef PetscPointer PetscViewer;$/;"	t
PetscViewer	include/finclude/petscviewerdef.h	8;"	d
PetscViewer	include/petscviewertypes.h	/^typedef struct _p_PetscViewer* PetscViewer;$/;"	t	typeref:struct:_p_PetscViewer
PetscViewerFlowControlEndMaster	include/petscviewer.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscViewerFlowControlEndMaster(PetscViewer viewer,PetscInt *mcnt)$/;"	f
PetscViewerFlowControlEndWorker	include/petscviewer.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscViewerFlowControlEndWorker(PetscViewer viewer,PetscInt *mcnt)$/;"	f
PetscViewerFlowControlStart	include/petscviewer.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscViewerFlowControlStart(PetscViewer viewer,PetscInt *mcnt,PetscInt *cnt)$/;"	f
PetscViewerFlowControlStepMaster	include/petscviewer.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscViewerFlowControlStepMaster(PetscViewer viewer,PetscInt i,PetscInt *mcnt,PetscInt cnt)$/;"	f
PetscViewerFlowControlStepWorker	include/petscviewer.h	/^PETSC_STATIC_INLINE PetscErrorCode PetscViewerFlowControlStepWorker(PetscViewer viewer,PetscMPIInt rank,PetscInt *mcnt)$/;"	f
PetscViewerFormat	include/finclude/petscviewerdef.h	14;"	d
PetscViewerFormat	include/petscviewer.h	/^  } PetscViewerFormat;$/;"	t	typeref:enum:__anon80
PetscViewerFormats	include/petscviewer.h	/^PETSC_EXTERN const char *const PetscViewerFormats[];$/;"	v
PetscViewerList	include/petscviewer.h	/^PETSC_EXTERN PetscFunctionList PetscViewerList;$/;"	v
PetscViewerType	include/finclude/petscviewerdef.h	13;"	d
PetscViewerType	include/petscviewer.h	/^typedef const char* PetscViewerType;$/;"	t
PetscViewerVTKFieldType	include/petscviewer.h	/^typedef enum {PETSC_VTK_POINT_FIELD, PETSC_VTK_POINT_VECTOR_FIELD, PETSC_VTK_CELL_FIELD, PETSC_VTK_CELL_VECTOR_FIELD} PetscViewerVTKFieldType;$/;"	t	typeref:enum:__anon81
PetscViewers	include/finclude/petscviewerdef.h	11;"	d
PetscViewers	include/petscviewer.h	/^typedef struct _n_PetscViewers* PetscViewers;$/;"	t	typeref:struct:_n_PetscViewers
PetscVoid	include/finclude/petscsysdef.h	75;"	d
PetscVoidFunction	include/petscsys.h	/^PETSC_EXTERN_TYPEDEF typedef void (*PetscVoidFunction)(void);$/;"	t
PetscVoidStarFunction	include/petscsys.h	/^PETSC_EXTERN_TYPEDEF typedef void (**PetscVoidStarFunction)(void);$/;"	t
PetscWriteMemoryBarrier	include/petsc-private/threadcommimpl.h	53;"	d
PetscWriteMemoryBarrier	include/petsc-private/threadcommimpl.h	55;"	d
Petsc_Counter_keyval	include/petsc-private/petscimpl.h	/^PETSC_EXTERN PetscMPIInt Petsc_Counter_keyval;$/;"	v
Petsc_InnerComm_keyval	include/petsc-private/petscimpl.h	/^PETSC_EXTERN PetscMPIInt Petsc_InnerComm_keyval;$/;"	v
Petsc_MemoryLogger	src/dm/impls/mesh/mesh.c	/^ALE::MemoryLogger Petsc_MemoryLogger;$/;"	v
Petsc_OuterComm_keyval	include/petsc-private/petscimpl.h	/^PETSC_EXTERN PetscMPIInt Petsc_OuterComm_keyval;$/;"	v
Petsc_ThreadComm_keyval	include/petsc-private/threadcommimpl.h	/^PETSC_EXTERN PetscMPIInt Petsc_ThreadComm_keyval;$/;"	v
Po	include/petsc-private/dmdaimpl.h	/^  PetscInt              Mo,No,Po;              \/* the size of the problem the offset is in to *\/$/;"	m	struct:__anon23
Point	include/petscsys.hh	/^    Point() {for(int d = 0; d < dim; ++d) {x[d] = 0.0;}}$/;"	f	struct:PETSc::Point
Point	include/petscsys.hh	/^    Point(const Point<dim,Value2_>& p) {for(int d = 0; d < dim; ++d) {x[d] = (Value2_) p.x[d];}}$/;"	f	struct:PETSc::Point
Point	include/petscsys.hh	/^    Point(const value_type p) {for(int d = 0; d < dim; ++d) {x[d] = p;}}$/;"	f	struct:PETSc::Point
Point	include/petscsys.hh	/^    Point(const value_type p[]) {for(int d = 0; d < dim; ++d) {x[d] = p[d];}}$/;"	f	struct:PETSc::Point
Point	include/petscsys.hh	/^  struct Point {$/;"	s	namespace:PETSc
Point	include/sieve/ALE_containers.hh	/^    Point() : prefix(0), index(0){};$/;"	f	class:ALE::Point
Point	include/sieve/ALE_containers.hh	/^    Point(const Point& p) : prefix(p.prefix), index(p.index){};$/;"	f	class:ALE::Point
Point	include/sieve/ALE_containers.hh	/^    Point(int p) : prefix(p), index(0){};$/;"	f	class:ALE::Point
Point	include/sieve/ALE_containers.hh	/^    Point(int p, int i) : prefix(p), index(i){};$/;"	f	class:ALE::Point
Point	include/sieve/ALE_containers.hh	/^  class Point {$/;"	c	namespace:ALE
Point	src/dm/impls/mesh/examples/tests/ex01.c	/^typedef ALE::Three::Sieve<ALE::def::Point,int,int> sieve_type;$/;"	t	class:ALE::def	file:
Point	src/dm/impls/mesh/examples/tests/ex04.cxx	/^typedef ALE::def::Point                                   Point;$/;"	t	file:
PointArray	include/sieve/Selection.hh	/^    typedef std::vector<point_type>              PointArray;$/;"	t	class:ALE::Selection
PointArray	include/sieve/SieveBuilder.hh	/^    typedef std::vector<typename sieve_type::point_type> PointArray;$/;"	t	class:ALE::SieveBuilder
PointArrow	src/dm/impls/mesh/examples/tests/ex04.cxx	/^typedef ALE::Two::Arrow<Point, Point, Point>              PointArrow;$/;"	t	file:
PointBiGraph	src/dm/impls/mesh/examples/tests/ex05.cxx	/^typedef ALE::Two::BiGraph<int,ALE::def::Point,int>     PointBiGraph;$/;"	t	file:
PointBiGraph	src/dm/impls/mesh/examples/tests/ex06.cxx	/^typedef ALE::Two::BiGraph<int,ALE::def::Point,int>    PointBiGraph;$/;"	t	file:
PointBiGraphFlip	src/dm/impls/mesh/examples/tests/ex05.cxx	/^typedef ALE::Two::BiGraph<ALE::def::Point,int,int>     PointBiGraphFlip;$/;"	t	file:
PointConeArraySequence	src/dm/impls/mesh/examples/tests/ex04.cxx	/^typedef ALE::Two::ConeArraySequence<PointArrow>           PointConeArraySequence;$/;"	t	file:
PointConeArrow	src/dm/impls/mesh/examples/tests/ex04.cxx	/^typedef PointConeArraySequence::cone_arrow_type           PointConeArrow;$/;"	t	file:
PointFactory	include/sieve/ParallelMapping.hh	/^    PointFactory(MPI_Comm comm, const int debug = 0) : ALE::ParallelObject(comm, debug), originalMax(-1) {};$/;"	f	class:ALE::PointFactory
PointFactory	include/sieve/ParallelMapping.hh	/^  class PointFactory : ALE::ParallelObject {$/;"	c	namespace:ALE
PointFlip	src/dm/impls/mesh/examples/tests/ex06.cxx	/^typedef ALE::Two::Flip<PointBiGraph>                  PointFlip;$/;"	t	file:
PointInEdgeRegion	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^bool HierarchyBuilder::PointInEdgeRegion(double * e_coords, double * p_coords, double region)$/;"	f	class:ALE::Hierarchy::HierarchyBuilder
PointInEdgeRegionSub	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^bool HierarchyBuilder::PointInEdgeRegionSub(double * e_coords, double * p_coords, double dif)   \/\/version for triangle crossover calculation, diff being the added spacing functions of the endpoints$/;"	f	class:ALE::Hierarchy::HierarchyBuilder
PointIsInTriangle	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^bool HierarchyBuilder::PointIsInTriangle(double * p_coords, double * v_coords)$/;"	f	class:ALE::Hierarchy::HierarchyBuilder
PointListToMesh	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^PetscErrorCode HierarchyBuilder::PointListToMesh(std::list<point_type> * points, patch_type newPatch)$/;"	f	class:ALE::Hierarchy::HierarchyBuilder
PointMidpointCollide	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^bool HierarchyBuilder::PointMidpointCollide(double * e_coords, double * p_coords, double p_space)$/;"	f	class:ALE::Hierarchy::HierarchyBuilder
PointParConeDelta	src/dm/impls/mesh/examples/tests/ex05.cxx	/^typedef ALE::Two::ParConeDelta<PointBiGraph>           PointParConeDelta;$/;"	t	file:
PointParDelta	src/dm/impls/mesh/examples/tests/ex06.cxx	/^typedef ALE::Two::ParSupportDelta<PointBiGraph>       PointParDelta;$/;"	t	file:
PointParSupportDelta	src/dm/impls/mesh/examples/tests/ex05.cxx	/^typedef ALE::Two::ParSupportDelta<PointBiGraphFlip>    PointParSupportDelta;$/;"	t	file:
PointRetriever	include/sieve/ISieve.hh	/^      PointRetriever() : unique(false), i(0), o(0), skip(0), limit(0) {$/;"	f	class:ALE::ISieveVisitor::PointRetriever
PointRetriever	include/sieve/ISieve.hh	/^      PointRetriever(const size_t size, Visitor& v, const bool unique = false) : unique(unique), i(0), o(0), skip(0), limit(0), visitor(&v) {$/;"	f	class:ALE::ISieveVisitor::PointRetriever
PointRetriever	include/sieve/ISieve.hh	/^      PointRetriever(const size_t size, const bool unique = false) : unique(unique), i(0), o(0), skip(0), limit(0) {$/;"	f	class:ALE::ISieveVisitor::PointRetriever
PointRetriever	include/sieve/ISieve.hh	/^    class PointRetriever {$/;"	c	namespace:ALE::ISieveVisitor
PointSequence	include/sieve/CartesianSieve.hh	/^      PointSequence(const point_type& start, const point_type& end) : _start(start), _end(end) {};$/;"	f	class:ALE::CartesianSieveDef::PointSequence
PointSequence	include/sieve/CartesianSieve.hh	/^    class PointSequence {$/;"	c	namespace:ALE::CartesianSieveDef
PointSequence	include/sieve/Sieve.hh	/^       PointSequence(const PointSequence& seq)            : _index(seq._index) {};$/;"	f	class:ALE::SieveDef::RecContainerTraits::PointSequence
PointSequence	include/sieve/Sieve.hh	/^       PointSequence(typename traits::index_type& index) : _index(index)     {};$/;"	f	class:ALE::SieveDef::RecContainerTraits::PointSequence
PointSequence	include/sieve/Sieve.hh	/^     class PointSequence {$/;"	c	struct:ALE::SieveDef::RecContainerTraits
PointSequence	include/sieve/Sifter.hh	/^       PointSequence(const PointSequence& seq)            : _index(seq._index) {};$/;"	f	class:ALE::SifterDef::RecContainerTraits::PointSequence
PointSequence	include/sieve/Sifter.hh	/^       PointSequence(typename traits::index_type& index) : _index(index)     {};$/;"	f	class:ALE::SifterDef::RecContainerTraits::PointSequence
PointSequence	include/sieve/Sifter.hh	/^     class PointSequence {$/;"	c	struct:ALE::SifterDef::RecContainerTraits
PointSet	include/sieve/Selection.hh	/^    typedef std::set<point_type>                 PointSet;$/;"	t	class:ALE::Selection
Pointer	config/PETSc/FEM.py	/^    from Cxx import Break, CompoundStatement, Function, Pointer, Switch$/;"	i
Pointer	config/PETSc/FEM.py	/^    from Cxx import Pointer$/;"	i
PointerSequence	include/sieve/Overlap.hh	/^  PointerSequence(const Value *begin, const Value *end) : beginP(begin), endP(end) {};$/;"	f	class:PETSc::PointerSequence
PointerSequence	include/sieve/Overlap.hh	/^class PointerSequence {$/;"	c	namespace:PETSc
PointsCollide	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^bool HierarchyBuilder::PointsCollide(double * a, double * b, double a_space, double b_space)$/;"	f	class:ALE::Hierarchy::HierarchyBuilder
PreallocationTests	src/dm/impls/mesh/examples/tests/sieveTests.cxx	/^PetscErrorCode PreallocationTests(const Options *options)$/;"	f
Preprocessor	config/BuildSystem/config/compile/C.py	/^class Preprocessor(config.compile.processor.Processor):$/;"	c
Preprocessor	config/BuildSystem/config/compile/CUDA.py	/^class Preprocessor(config.compile.processor.Processor):$/;"	c
Preprocessor	config/BuildSystem/config/compile/Cxx.py	/^class Preprocessor(config.compile.processor.Processor):$/;"	c
Preprocessor	config/BuildSystem/config/compile/FC.py	/^class Preprocessor(config.compile.C.Preprocessor):$/;"	c
PrintMatrix	src/dm/impls/mesh/examples/tests/mesh1.cxx	/^PetscErrorCode PrintMatrix(MPI_Comm comm, int rank, const std::string& name, const int rows, const int cols, const section_type::value_type matrix[])$/;"	f
PrintVisitor	include/sieve/ISieve.hh	/^      PrintVisitor(ostringstream& s, const int rank = 0) : os(s), rank(rank) {};$/;"	f	class:ALE::ISieveVisitor::PrintVisitor
PrintVisitor	include/sieve/ISieve.hh	/^    class PrintVisitor {$/;"	c	namespace:ALE::ISieveVisitor
Problem	include/sieve/FEMProblem.hh	/^  namespace Problem {$/;"	n	namespace:ALE
Problem	include/sieve/UFCProblem.hh	/^  namespace Problem {$/;"	n	namespace:ALE
ProcessHandler	config/BuildSystem/RDict.py	/^    class ProcessHandler(SocketServer.StreamRequestHandler):$/;"	c	function:RDict.serve
ProcessOptions	src/dm/impls/mesh/examples/tests/closure1.cxx	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tests/discretization1.cxx	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tests/ex1.c	/^PetscErrorCode ProcessOptions(MPI_Comm comm, AppCtx *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tests/ex2.c	/^PetscErrorCode ProcessOptions(MPI_Comm comm, AppCtx *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tests/ex3.c	/^PetscErrorCode ProcessOptions(MPI_Comm comm, AppCtx *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tests/mesh1.cxx	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tests/mesh2.cxx	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tests/meshing.cxx	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options * options) {$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tests/operator1.cxx	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tests/overlap1.cxx	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tests/overlap2.cxx	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tests/refinementTest.cxx	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tests/section1-old.cxx	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tests/section2.cxx	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tests/sieve2-old.cxx	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tests/sieveTests.cxx	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tests/sifter1.cxx	/^static PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f	file:
ProcessOptions	src/dm/impls/mesh/examples/tests/stl1.cxx	/^static PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f	file:
ProcessOptions	src/dm/impls/mesh/examples/tests/topology1.cxx	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tests/unitTests.cxx	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tutorials/ex1.c	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tutorials/ex_coarsen.c	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tutorials/ex_coarsen.h	/^PetscErrorCode ProcessOptions(MPI_Comm comm)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tutorials/ex_coarsen_2.c	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tutorials/ex_coarsen_3.c	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options *options)$/;"	f
ProcessOptions	src/dm/impls/mesh/examples/tutorials/mesh_surgery.cxx	/^PetscErrorCode ProcessOptions(MPI_Comm comm, Options * options) {$/;"	f
ProcessOptions	src/dm/impls/moab/examples/tests/ex1.cxx	/^PetscErrorCode ProcessOptions(MPI_Comm comm, AppCtx *options)$/;"	f
ProcessOptions	src/dm/impls/plex/examples/tests/ex1.c	/^PetscErrorCode ProcessOptions(MPI_Comm comm, AppCtx *options)$/;"	f
ProcessOptions	src/dm/impls/plex/examples/tests/ex3.c	/^PetscErrorCode ProcessOptions(MPI_Comm comm, AppCtx *options)$/;"	f
ProcessOptions	src/dm/impls/plex/examples/tests/ex4.c	/^PetscErrorCode ProcessOptions(MPI_Comm comm, AppCtx *options)$/;"	f
ProcessOptions	src/dm/impls/plex/examples/tests/ex5.c	/^PetscErrorCode ProcessOptions(MPI_Comm comm, AppCtx *options)$/;"	f
ProcessOptions	src/dm/impls/plex/examples/tests/ex6.c	/^PetscErrorCode ProcessOptions(MPI_Comm comm, AppCtx *options)$/;"	f
ProcessOptions	src/dm/impls/plex/examples/tests/ex7.c	/^PetscErrorCode ProcessOptions(MPI_Comm comm, AppCtx *options)$/;"	f
Processor	config/BuildSystem/build/processor.py	/^class Processor(build.transform.Transform):$/;"	c
Processor	config/BuildSystem/config/compile/processor.py	/^class Processor(logger.Logger):$/;"	c
Processor	src/dm/impls/mesh/examples/tests/subset.cxx	/^class Processor {$/;"	c	file:
Project	config/BuildSystem/RDict.py	/^  import project          # This is necessary for us to create Project objects on load$/;"	i
Project	config/BuildSystem/project.py	/^class Project(object):$/;"	c
Pullback	include/sieve/ParallelMapping.hh	/^  namespace Pullback {$/;"	n	namespace:ALE
PyLith	include/petscdmmesh_formats.hh	/^  namespace PyLith {$/;"	n	namespace:ALE
Python	config/BuildSystem/config/packages/scientificpython.py	/^        self.framework.logPrint('ERROR: Could not import Scientific Python: '+str(e))$/;"	i
QuadratureGenerator	config/PETSc/FEM.py	/^class QuadratureGenerator(script.Script):$/;"	c
Queue	include/petsc-private/characteristicimpl.h	/^typedef CharacteristicPointDA2D *Queue;$/;"	t
RDict	bin/configVars.py	/^    import RDict$/;"	i
RDict	config/BuildSystem/RDict.py	/^    import RDict # Need this to locate server script$/;"	i
RDict	config/BuildSystem/RDict.py	/^class RDict(dict):$/;"	c
RDict	config/BuildSystem/args.py	/^        import RDict$/;"	i
RDict	config/BuildSystem/config/framework.py	/^      import RDict$/;"	i
RDict	config/BuildSystem/config/framework.py	/^    import RDict$/;"	i
RDict	config/BuildSystem/getsplicers.py	/^import RDict$/;"	i
RDict	config/BuildSystem/maker.py	/^    import RDict$/;"	i
RDict	config/BuildSystem/pythonpath.py	/^import RDict$/;"	i
RDict	config/BuildSystem/sidldllpath.py	/^import RDict$/;"	i
RDict	config/PETSc/FEM.py	/^    import RDict$/;"	i
RDict	config/builder.py	/^   import RDict$/;"	i
RDict	config/cmakeboot.py	/^   import RDict$/;"	i
RDict	config/install.py	/^    import RDict$/;"	i
RDict	src/dm/impls/mesh/examples/tests/memoryTests.py	/^import RDict$/;"	i
RDict	src/dm/impls/mesh/examples/tests/sieveTests.py	/^import RDict$/;"	i
RECEIVE	include/sieve/Field.hh	/^    typedef enum {SEND, RECEIVE}                     request_type;$/;"	e	enum:ALE::Field::__anon5
REPLICATED_BDDC	include/petscpc.h	/^typedef enum {SEQUENTIAL_BDDC,REPLICATED_BDDC,PARALLEL_BDDC,MULTILEVEL_BDDC} CoarseProblemType;$/;"	e	enum:__anon54
RHS_FEMProblem	include/sieve/FEMProblem.hh	/^    PetscErrorCode RHS_FEMProblem(::Mesh mesh, SectionReal X, SectionReal section,  void * ctx) {$/;"	f	namespace:ALE::Problem
ReadFEAPMesh	src/dm/impls/mesh/examples/tests/ex1.c	/^PetscErrorCode ReadFEAPMesh(MPI_Comm comm, const char *filename, AppCtx *user, Vec *coordinates, Vec *elements)$/;"	f
ReadMesh	src/dm/impls/mesh/examples/tests/ex1.c	/^PetscErrorCode ReadMesh(MPI_Comm comm, const char *filename, AppCtx *user, DM *dm)$/;"	f
ReadMesh	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^PetscErrorCode ReadMesh(MPI_Comm comm, PFLOTRANMesh *data, Options *options)$/;"	f
Rec	include/sieve/Sieve.hh	/^      Rec() : point(point_type()), degree(0), depth(0), height(0), marker(marker_type()) {};$/;"	f	struct:ALE::SieveDef::Rec
Rec	include/sieve/Sieve.hh	/^      Rec(const Rec& r) : point(r.point), degree(r.degree), depth(r.depth), height(r.height), marker(r.marker) {}$/;"	f	struct:ALE::SieveDef::Rec
Rec	include/sieve/Sieve.hh	/^      Rec(const point_type& p) : point(p), degree(0), depth(0), height(0), marker(marker_type()) {};$/;"	f	struct:ALE::SieveDef::Rec
Rec	include/sieve/Sieve.hh	/^      Rec(const point_type& p, const int degree) : point(p), degree(degree), depth(0), height(0), marker(marker_type()) {};$/;"	f	struct:ALE::SieveDef::Rec
Rec	include/sieve/Sieve.hh	/^      Rec(const point_type& p, const int degree, const int depth, const int height, const marker_type marker) : point(p), degree(degree), depth(depth), height(height), marker(marker) {};$/;"	f	struct:ALE::SieveDef::Rec
Rec	include/sieve/Sieve.hh	/^    struct Rec {$/;"	s	namespace:ALE::SieveDef
Rec	include/sieve/Sifter.hh	/^      Rec() : degree(0){};$/;"	f	struct:ALE::SifterDef::Rec
Rec	include/sieve/Sifter.hh	/^      Rec(const Rec& r) : point(r.point), degree(r.degree) {}$/;"	f	struct:ALE::SifterDef::Rec
Rec	include/sieve/Sifter.hh	/^      Rec(const point_type& p, const int d) : point(p), degree(d) {};$/;"	f	struct:ALE::SifterDef::Rec
Rec	include/sieve/Sifter.hh	/^    struct Rec {$/;"	s	namespace:ALE::SifterDef
RecContainer	include/sieve/Sieve.hh	/^    struct RecContainer {$/;"	s	namespace:ALE::SieveDef
RecContainer	include/sieve/Sifter.hh	/^    struct RecContainer {$/;"	s	namespace:ALE::SifterDef
RecContainerTraits	include/sieve/Sieve.hh	/^    struct RecContainerTraits {$/;"	s	namespace:ALE::SieveDef
RecContainerTraits	include/sieve/Sifter.hh	/^    struct RecContainerTraits {$/;"	s	namespace:ALE::SifterDef
ReceiveDistribution	src/dm/impls/mesh/examples/tests/sieve2-old.cxx	/^PetscErrorCode ReceiveDistribution(const Obj<ALE::Mesh>& mesh, const Obj<ALE::Mesh>& meshNew)$/;"	f
RecvOverlap	include/sieve/Overlap.hh	/^  RecvOverlap(MPI_Comm comm, const int debug = 0) : Overlap<Point,Rank>(comm, debug) {};$/;"	f	class:PETSc::RecvOverlap
RecvOverlap	include/sieve/Overlap.hh	/^class RecvOverlap : public Overlap<Point,Rank> {$/;"	c	namespace:PETSc
ReduceBegin	include/petsc-private/sfimpl.h	/^  PetscErrorCode (*ReduceBegin)(PetscSF,MPI_Datatype,const void*,void*,MPI_Op);$/;"	m	struct:_PetscSFOps
ReduceEnd	include/petsc-private/sfimpl.h	/^  PetscErrorCode (*ReduceEnd)(PetscSF,MPI_Datatype,const void*,void*,MPI_Op);$/;"	m	struct:_PetscSFOps
Refiner	include/sieve/Generator.hh	/^    class Refiner {$/;"	c	namespace:ALE::TetGen
Refiner	include/sieve/Generator.hh	/^    class Refiner {$/;"	c	namespace:ALE::Triangle
RegisterDistributionFunctionSuite	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^PetscErrorCode RegisterDistributionFunctionSuite() {$/;"	f
RegisterIDistributionFunctionSuite	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^PetscErrorCode RegisterIDistributionFunctionSuite() {$/;"	f
RegisterIMeshFunctionSuite	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^PetscErrorCode RegisterIMeshFunctionSuite() {$/;"	f
RegisterIMeshMemorySuite	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^PetscErrorCode RegisterIMeshMemorySuite() {$/;"	f
RegisterIMeshStressSuite	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^PetscErrorCode RegisterIMeshStressSuite() {$/;"	f
RegisterISectionStressSuite	src/dm/impls/mesh/examples/tests/isection1.cxx	/^PetscErrorCode RegisterISectionStressSuite() {$/;"	f
RegisterISieveFunctionSuite	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^PetscErrorCode RegisterISieveFunctionSuite() {$/;"	f
RegisterISieveMemorySuite	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^PetscErrorCode RegisterISieveMemorySuite() {$/;"	f
RegisterSTLMemorySuite	src/dm/impls/mesh/examples/tests/stl1.cxx	/^PetscErrorCode RegisterSTLMemorySuite() {$/;"	f
RegisterSectionStressSuite	src/dm/impls/mesh/examples/tests/section1.cxx	/^PetscErrorCode RegisterSectionStressSuite() {$/;"	f
RegisterSieveFunctionSuite	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^PetscErrorCode RegisterSieveFunctionSuite() {$/;"	f
RegisterSieveStressSuite	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^PetscErrorCode RegisterSieveStressSuite() {$/;"	f
RegisterSifterStressSuite	src/dm/impls/mesh/examples/tests/sifter1.cxx	/^PetscErrorCode RegisterSifterStressSuite() {$/;"	f
RegisterSuites	src/dm/impls/mesh/examples/tests/unitTests.cxx	/^PetscErrorCode RegisterSuites(Options *options) {$/;"	f
RemoteBuild	config/BuildSystem/regression/buildtest.py	/^class RemoteBuild(script.Script):$/;"	c
RemoveDirectory	config/BuildSystem/logger.py	/^RemoveDirectory = os.path.join(os.getcwd(),'')$/;"	v
Remover	config/BuildSystem/build/transform.py	/^class Remover (Transform):$/;"	c
ReplacementBinaryFusion	include/sieve/ParallelMapping.hh	/^    class ReplacementBinaryFusion {$/;"	c	namespace:ALE::Pullback
Reset	include/petsc-private/sfimpl.h	/^  PetscErrorCode (*Reset)(PetscSF);$/;"	m	struct:_PetscSFOps
RestartType	include/petscdmmesh_formats.hh	/^    } RestartType;$/;"	t	namespace:ALE::PCICE	typeref:struct:ALE::PCICE::__anon9
RestartType	include/petscdmmesh_formats.hh	/^    } RestartType;$/;"	t	namespace:ALE::PFLOTRAN	typeref:struct:ALE::PFLOTRAN::__anon10
RestrictVecVisitor	include/sieve/ISieve.hh	/^      RestrictVecVisitor(const Vec v, const PetscSection s, const int size) : v(v), section(s), size(size), i(0), nF(0), processed(true) {$/;"	f	class:ALE::ISieveVisitor::RestrictVecVisitor
RestrictVecVisitor	include/sieve/ISieve.hh	/^      RestrictVecVisitor(const Vec v, const PetscSection s, const int size, value_type *values) : v(v), section(s), size(size), i(0), nF(0), processed(true) {$/;"	f	class:ALE::ISieveVisitor::RestrictVecVisitor
RestrictVecVisitor	include/sieve/ISieve.hh	/^      RestrictVecVisitor(const Vec v, const PetscSection s, const int size, value_type *values, int *offsets, int *indices) : v(v), section(s), size(size), i(0), nF(0), offsets(offsets), indices(indices), processed(false) {$/;"	f	class:ALE::ISieveVisitor::RestrictVecVisitor
RestrictVecVisitor	include/sieve/ISieve.hh	/^    class RestrictVecVisitor {$/;"	c	namespace:ALE::ISieveVisitor
RestrictVisitor	include/sieve/ISieve.hh	/^      RestrictVisitor(const Section& s, const int size) : section(s), size(size), i(0) {$/;"	f	class:ALE::ISieveVisitor::RestrictVisitor
RestrictVisitor	include/sieve/ISieve.hh	/^      RestrictVisitor(const Section& s, const int size, value_type *values) : section(s), size(size), i(0) {$/;"	f	class:ALE::ISieveVisitor::RestrictVisitor
RestrictVisitor	include/sieve/ISieve.hh	/^    class RestrictVisitor {$/;"	c	namespace:ALE::ISieveVisitor
Retriever	config/BuildSystem/retrieval.py	/^class Retriever(logger.Logger):$/;"	c
ReversePrintVisitor	include/sieve/ISieve.hh	/^      ReversePrintVisitor(ostringstream& s, const int rank) : PrintVisitor(s, rank) {};$/;"	f	class:ALE::ISieveVisitor::ReversePrintVisitor
ReversePrintVisitor	include/sieve/ISieve.hh	/^    class ReversePrintVisitor : public PrintVisitor {$/;"	c	namespace:ALE::ISieveVisitor
ReversibleIndexSequenceTraits	include/sieve/LabelSifter.hh	/^    struct ReversibleIndexSequenceTraits {$/;"	s	namespace:ALE::NewSifterDef
ReversibleIndexSequenceTraits	include/sieve/Sifter.hh	/^    struct ReversibleIndexSequenceTraits {$/;"	s	namespace:ALE::SifterDef
RootPanel	include/web/AMSOptions.py	/^from pyjamas.ui.RootPanel import RootPanel$/;"	i
RootPanel	include/web/AMSSnoopObjects.py	/^from pyjamas.ui.RootPanel import RootPanel$/;"	i
RootPanel	include/web/AMSSnoopStack.py	/^from pyjamas.ui.RootPanel import RootPanel$/;"	i
RootedExtensionFileSet	config/BuildSystem/build/fileset.py	/^class RootedExtensionFileSet (RootedFileSet, ExtensionFileSet):$/;"	c
RootedFileSet	config/BuildSystem/build/fileset.py	/^class RootedFileSet(FileSet, base.Base):$/;"	c
RunUnitTests	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^PetscErrorCode RunUnitTests(const Options *options)$/;"	f
RunUnitTests	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^PetscErrorCode RunUnitTests(const Options *options)$/;"	f
RunUnitTests	src/dm/impls/mesh/examples/tests/refinementTest.cxx	/^PetscErrorCode RunUnitTests(const Options *options)$/;"	f
RunUnitTests	src/dm/impls/mesh/examples/tests/sieveTests.cxx	/^PetscErrorCode RunUnitTests(const Options *options)$/;"	f
RunUnitTests	src/dm/impls/mesh/examples/tests/unitTests.cxx	/^PetscErrorCode RunUnitTests()$/;"	f
SAME_NONZERO_PATTERN	include/petscmat.h	/^typedef enum {DIFFERENT_NONZERO_PATTERN,SUBSET_NONZERO_PATTERN,SAME_NONZERO_PATTERN,SAME_PRECONDITIONER} MatStructure;$/;"	e	enum:__anon87
SAME_PRECONDITIONER	include/petscmat.h	/^typedef enum {DIFFERENT_NONZERO_PATTERN,SUBSET_NONZERO_PATTERN,SAME_NONZERO_PATTERN,SAME_PRECONDITIONER} MatStructure;$/;"	e	enum:__anon87
SCATTER_FORWARD	include/petscvec.h	/^typedef enum {SCATTER_FORWARD=0, SCATTER_REVERSE=1, SCATTER_FORWARD_LOCAL=2, SCATTER_REVERSE_LOCAL=3, SCATTER_LOCAL=2} ScatterMode;$/;"	e	enum:__anon37
SCATTER_FORWARD_LOCAL	include/petscvec.h	/^typedef enum {SCATTER_FORWARD=0, SCATTER_REVERSE=1, SCATTER_FORWARD_LOCAL=2, SCATTER_REVERSE_LOCAL=3, SCATTER_LOCAL=2} ScatterMode;$/;"	e	enum:__anon37
SCATTER_LOCAL	include/petscvec.h	/^typedef enum {SCATTER_FORWARD=0, SCATTER_REVERSE=1, SCATTER_FORWARD_LOCAL=2, SCATTER_REVERSE_LOCAL=3, SCATTER_LOCAL=2} ScatterMode;$/;"	e	enum:__anon37
SCATTER_REVERSE	include/petscvec.h	/^typedef enum {SCATTER_FORWARD=0, SCATTER_REVERSE=1, SCATTER_FORWARD_LOCAL=2, SCATTER_REVERSE_LOCAL=3, SCATTER_LOCAL=2} ScatterMode;$/;"	e	enum:__anon37
SCATTER_REVERSE_LOCAL	include/petscvec.h	/^typedef enum {SCATTER_FORWARD=0, SCATTER_REVERSE=1, SCATTER_FORWARD_LOCAL=2, SCATTER_REVERSE_LOCAL=3, SCATTER_LOCAL=2} ScatterMode;$/;"	e	enum:__anon37
SECTIONINT_CLASSID	include/petsc-private/meshimpl.h	/^PETSC_EXTERN PetscClassId SECTIONINT_CLASSID;$/;"	v
SECTIONINT_CLASSID	include/petscdmmesh.h	/^PETSC_EXTERN PetscClassId SECTIONINT_CLASSID;$/;"	v
SECTIONINT_CLASSID	src/dm/impls/mesh/section.c	/^PetscClassId  SECTIONINT_CLASSID;$/;"	v
SECTIONPAIR_CLASSID	src/dm/impls/mesh/section.c	/^PetscClassId  SECTIONPAIR_CLASSID;$/;"	v
SECTIONREAL_CLASSID	include/petsc-private/meshimpl.h	/^PETSC_EXTERN PetscClassId SECTIONREAL_CLASSID;$/;"	v
SECTIONREAL_CLASSID	include/petscdmmesh.h	/^PETSC_EXTERN PetscClassId SECTIONREAL_CLASSID;$/;"	v
SECTIONREAL_CLASSID	src/dm/impls/mesh/section.c	/^PetscClassId  SECTIONREAL_CLASSID;$/;"	v
SEND	include/sieve/Field.hh	/^    typedef enum {SEND, RECEIVE}                     request_type;$/;"	e	enum:ALE::Field::__anon5
SEQUENTIAL_BDDC	include/petscpc.h	/^typedef enum {SEQUENTIAL_BDDC,REPLICATED_BDDC,PARALLEL_BDDC,MULTILEVEL_BDDC} CoarseProblemType;$/;"	e	enum:__anon54
SETERRABORT	include/petscerror.h	208;"	d
SETERRABORT	include/petscerror.h	326;"	d
SETERRQ	include/finclude/petscsysdef.h	181;"	d
SETERRQ	include/petscerror.h	115;"	d
SETERRQ	include/petscerror.h	317;"	d
SETERRQ1	include/petscerror.h	142;"	d
SETERRQ1	include/petscerror.h	318;"	d
SETERRQ2	include/petscerror.h	170;"	d
SETERRQ2	include/petscerror.h	319;"	d
SETERRQ3	include/petscerror.h	201;"	d
SETERRQ3	include/petscerror.h	320;"	d
SETERRQ4	include/petscerror.h	203;"	d
SETERRQ4	include/petscerror.h	321;"	d
SETERRQ5	include/petscerror.h	204;"	d
SETERRQ5	include/petscerror.h	322;"	d
SETERRQ6	include/petscerror.h	205;"	d
SETERRQ6	include/petscerror.h	323;"	d
SETERRQ7	include/petscerror.h	206;"	d
SETERRQ7	include/petscerror.h	324;"	d
SETERRQ8	include/petscerror.h	207;"	d
SETERRQ8	include/petscerror.h	325;"	d
SGIMPICheck	config/BuildSystem/config/packages/MPI.py	/^  def SGIMPICheck(self):$/;"	m	class:Configure
SIDL	config/BuildSystem/build/framework.py	/^      import build.templates.SIDL$/;"	i
SIDL	config/BuildSystem/build/framework.py	/^    import build.compile.SIDL$/;"	i
SIDL	config/BuildSystem/build/templates/Compile.py	/^    import build.compile.SIDL$/;"	i
SIDL	config/BuildSystem/build/templates/SIDL.py	/^import build.compile.SIDL$/;"	i
SIDL	config/BuildSystem/build/templates/usingSIDL.py	/^      import ANL.SIDL.ClassFinder$/;"	i
SIDL	config/BuildSystem/build/templates/usingSIDL.py	/^      import SIDL.Loader$/;"	i
SIDL	config/BuildSystem/build/templates/usingSIDL.py	/^    import build.compile.SIDL$/;"	i
SIDL	config/BuildSystem/checkdlllibs.py	/^import SIDL.Loader$/;"	i
SIDL	config/BuildSystem/nargs.py	/^        import SIDL.Loader$/;"	i
SIDLConstants	config/BuildSystem/build/compile/SIDL.py	/^class SIDLConstants:$/;"	c
SIDLLanguage	config/BuildSystem/build/templates/usingSIDL.py	/^      import SIDLLanguage.Parser$/;"	i
SIDLLanguageList	config/BuildSystem/build/compile/SIDL.py	/^class SIDLLanguageList (list):$/;"	c
SIDLMake	config/BuildSystem/maker.py	/^class SIDLMake(Make):$/;"	c
SMALL_FONT_SIZE	bin/TOPSInstaller.py	/^SMALL_FONT_SIZE       =  9$/;"	v
SNES	bin/matlab/classes/matlabheader.h	/^typedef PetscPointer SNES;$/;"	t
SNES	include/finclude/petscsnesdef.h	10;"	d
SNES	include/petscsnes.h	/^typedef struct _p_SNES* SNES;$/;"	t	typeref:struct:_p_SNES
SNESANDERSON	include/petscsnes.h	45;"	d
SNESASPIN	include/petscsnes.h	46;"	d
SNESConvergedReason	include/finclude/petscsnesdef.h	14;"	d
SNESConvergedReason	include/petscsnes.h	/^              SNES_CONVERGED_ITERATING          =  0} SNESConvergedReason;$/;"	t	typeref:enum:__anon73
SNESConvergedReasons	include/petscsnes.h	/^PETSC_EXTERN const char *const*SNESConvergedReasons;$/;"	v
SNESFAS	include/finclude/petscsnesdef.h	43;"	d
SNESFAS	include/petscsnes.h	42;"	d
SNESFASType	include/finclude/petscsnesfasdef.h	9;"	d
SNESFASType	include/petscsnesfas.h	/^typedef enum { SNES_FAS_MULTIPLICATIVE, SNES_FAS_ADDITIVE } SNESFASType;$/;"	t	typeref:enum:__anon61
SNESFASTypes	include/petscsnesfas.h	/^PETSC_EXTERN const char *const  SNESFASTypes[];$/;"	v
SNESGS	include/petscsnes.h	40;"	d
SNESGetSNESLineSearch	include/petscsnes.h	/^PETSC_DEPRECATED("Use SNESGetLineSearch()") PETSC_STATIC_INLINE PetscErrorCode SNESGetSNESLineSearch(SNES snes,SNESLineSearch *ls) {return SNESGetLineSearch(snes,ls);}$/;"	f
SNESKSPEW	include/petsc-private/snesimpl.h	/^} SNESKSPEW;$/;"	t	typeref:struct:__anon5
SNESKSPONLY	include/finclude/petscsnesdef.h	36;"	d
SNESKSPONLY	include/petscsnes.h	34;"	d
SNESLINESEARCHBASIC	include/finclude/petscsnesdef.h	50;"	d
SNESLINESEARCHBASIC	include/petscsnes.h	464;"	d
SNESLINESEARCHBT	include/finclude/petscsnesdef.h	51;"	d
SNESLINESEARCHBT	include/petscsnes.h	463;"	d
SNESLINESEARCHCP	include/finclude/petscsnesdef.h	53;"	d
SNESLINESEARCHCP	include/petscsnes.h	466;"	d
SNESLINESEARCHL2	include/finclude/petscsnesdef.h	52;"	d
SNESLINESEARCHL2	include/petscsnes.h	465;"	d
SNESLINESEARCHSHELL	include/finclude/petscsnesdef.h	54;"	d
SNESLINESEARCHSHELL	include/petscsnes.h	467;"	d
SNESLINESEARCH_CLASSID	include/petscsnes.h	/^PETSC_EXTERN PetscClassId      SNESLINESEARCH_CLASSID;$/;"	v
SNESLineSearch	include/finclude/petscsnesdef.h	18;"	d
SNESLineSearch	include/petscsnes.h	/^typedef struct _p_LineSearch* SNESLineSearch;$/;"	t	typeref:struct:_p_LineSearch
SNESLineSearchApplyFunc	include/petscsnes.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*SNESLineSearchApplyFunc)(SNESLineSearch);$/;"	t
SNESLineSearchList	include/petscsnes.h	/^PETSC_EXTERN PetscFunctionList SNESLineSearchList;$/;"	v
SNESLineSearchOrder	include/finclude/petscsnesdef.h	19;"	d
SNESLineSearchRegisterAllCalled	include/petscsnes.h	/^PETSC_EXTERN PetscBool         SNESLineSearchRegisterAllCalled;$/;"	v
SNESLineSearchType	include/finclude/petscsnesdef.h	15;"	d
SNESLineSearchType	include/petscsnes.h	/^typedef const char* SNESLineSearchType;$/;"	t
SNESLineSearchUserFunc	include/petscsnes.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*SNESLineSearchUserFunc)(SNESLineSearch, void *);$/;"	t
SNESLineSearchVINormFunc	include/petscsnes.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*SNESLineSearchVINormFunc)(SNES,Vec,Vec,PetscReal *);$/;"	t
SNESLineSearchVIProjectFunc	include/petscsnes.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*SNESLineSearchVIProjectFunc)(SNES,Vec);$/;"	t
SNESLineSearch_Apply	include/petscsnes.h	/^PETSC_EXTERN PetscLogEvent     SNESLineSearch_Apply;$/;"	v
SNESList	include/petscsnes.h	/^PETSC_EXTERN PetscFunctionList SNESList;$/;"	v
SNESLogConvergenceHistory	include/petsc-private/snesimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode SNESLogConvergenceHistory(SNES snes,PetscReal res,PetscInt its)$/;"	f
SNESMS	include/finclude/petscsnesdef.h	44;"	d
SNESMS	include/petscsnes.h	43;"	d
SNESMSEULER	include/finclude/petscsnesdef.h	68;"	d
SNESMSEULER	include/petscsnes.h	627;"	d
SNESMSJAMESON83	include/finclude/petscsnesdef.h	70;"	d
SNESMSJAMESON83	include/petscsnes.h	628;"	d
SNESMSM62	include/finclude/petscsnesdef.h	69;"	d
SNESMSM62	include/petscsnes.h	626;"	d
SNESMSType	include/finclude/petscsnesdef.h	13;"	d
SNESMSType	include/petscsnes.h	/^typedef const char* SNESMSType;$/;"	t
SNESMSVLTP21	include/finclude/petscsnesdef.h	71;"	d
SNESMSVLTP21	include/petscsnes.h	629;"	d
SNESMSVLTP31	include/finclude/petscsnesdef.h	72;"	d
SNESMSVLTP31	include/petscsnes.h	630;"	d
SNESMSVLTP41	include/finclude/petscsnesdef.h	73;"	d
SNESMSVLTP41	include/petscsnes.h	631;"	d
SNESMSVLTP51	include/finclude/petscsnesdef.h	74;"	d
SNESMSVLTP51	include/petscsnes.h	632;"	d
SNESMSVLTP61	include/finclude/petscsnesdef.h	75;"	d
SNESMSVLTP61	include/petscsnes.h	633;"	d
SNESNASM	include/petscsnes.h	44;"	d
SNESNCG	include/finclude/petscsnesdef.h	42;"	d
SNESNCG	include/petscsnes.h	41;"	d
SNESNCGType	include/finclude/petscsnesdef.h	24;"	d
SNESNCGType	include/petscsnes.h	/^  SNES_NCG_CD    = 4} SNESNCGType;$/;"	t	typeref:enum:__anon77
SNESNCGTypes	include/petscsnes.h	/^PETSC_EXTERN const char *const SNESNCGTypes[];$/;"	v
SNESNEWTONLS	include/finclude/petscsnesdef.h	31;"	d
SNESNEWTONLS	include/petscsnes.h	29;"	d
SNESNEWTONTR	include/finclude/petscsnesdef.h	32;"	d
SNESNEWTONTR	include/petscsnes.h	30;"	d
SNESNGMRES	include/finclude/petscsnesdef.h	39;"	d
SNESNGMRES	include/petscsnes.h	37;"	d
SNESNGMRESRestartType	include/finclude/petscsnesdef.h	25;"	d
SNESNGMRESRestartType	include/petscsnes.h	/^  SNES_NGMRES_RESTART_DIFFERENCE = 2} SNESNGMRESRestartType;$/;"	t	typeref:enum:__anon75
SNESNGMRESRestartTypes	include/petscsnes.h	/^PETSC_EXTERN const char *const SNESNGMRESRestartTypes[];$/;"	v
SNESNGMRESSelectType	include/finclude/petscsnesdef.h	26;"	d
SNESNGMRESSelectType	include/petscsnes.h	/^  SNES_NGMRES_SELECT_LINESEARCH = 2} SNESNGMRESSelectType;$/;"	t	typeref:enum:__anon76
SNESNGMRESSelectTypes	include/petscsnes.h	/^PETSC_EXTERN const char *const SNESNGMRESSelectTypes[];$/;"	v
SNESNRICHARDSON	include/finclude/petscsnesdef.h	35;"	d
SNESNRICHARDSON	include/petscsnes.h	33;"	d
SNESNormType	include/finclude/petscsnesdef.h	20;"	d
SNESNormType	include/petscsnes.h	/^              SNES_NORM_INITIAL_FINAL_ONLY =  4} SNESNormType;$/;"	t	typeref:enum:__anon74
SNESNormTypes	include/petscsnes.h	/^PETSC_EXTERN const char *const*const SNESNormTypes;$/;"	v
SNESOps	include/petsc-private/snesimpl.h	/^typedef struct _SNESOps *SNESOps;$/;"	t	typeref:struct:_SNESOps
SNESPYTHON	include/finclude/petscsnesdef.h	33;"	d
SNESPYTHON	include/petscsnes.h	31;"	d
SNESQN	include/finclude/petscsnesdef.h	40;"	d
SNESQN	include/petscsnes.h	38;"	d
SNESQNCompositionType	include/finclude/petscsnesdef.h	22;"	d
SNESQNRestartType	include/finclude/petscsnesdef.h	21;"	d
SNESQNRestartType	include/petscsnes.h	/^              SNES_QN_RESTART_PERIODIC = 2} SNESQNRestartType;$/;"	t	typeref:enum:__anon79
SNESQNRestartTypes	include/petscsnes.h	/^PETSC_EXTERN const char *const SNESQNRestartTypes[];$/;"	v
SNESQNScaleType	include/finclude/petscsnesdef.h	23;"	d
SNESQNScaleType	include/petscsnes.h	/^              SNES_QN_SCALE_JACOBIAN   = 3} SNESQNScaleType;$/;"	t	typeref:enum:__anon78
SNESQNScaleTypes	include/petscsnes.h	/^PETSC_EXTERN const char *const SNESQNScaleTypes[];$/;"	v
SNESRegisterAllCalled	include/petscsnes.h	/^PETSC_EXTERN PetscBool         SNESRegisterAllCalled;$/;"	v
SNESSHELL	include/finclude/petscsnesdef.h	41;"	d
SNESSHELL	include/petscsnes.h	39;"	d
SNESSetSNESLineSearch	include/petscsnes.h	/^PETSC_DEPRECATED("Use SNESSetLineSearch()") PETSC_STATIC_INLINE PetscErrorCode SNESSetSNESLineSearch(SNES snes,SNESLineSearch ls) {return SNESSetLineSearch(snes,ls);}$/;"	f
SNESTEST	include/finclude/petscsnesdef.h	34;"	d
SNESTEST	include/petscsnes.h	32;"	d
SNESType	include/finclude/petscsnesdef.h	12;"	d
SNESType	include/petscsnes.h	/^typedef const char* SNESType;$/;"	t
SNESVIComputeVariableBoundsFunction	include/petsc-private/snesimpl.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*SNESVIComputeVariableBoundsFunction)(SNES,Vec,Vec);$/;"	t
SNESVINEWTONRSLS	include/finclude/petscsnesdef.h	37;"	d
SNESVINEWTONRSLS	include/petscsnes.h	35;"	d
SNESVINEWTONSSLS	include/finclude/petscsnesdef.h	38;"	d
SNESVINEWTONSSLS	include/petscsnes.h	36;"	d
SNES_CLASSID	include/petscsnes.h	/^PETSC_EXTERN PetscClassId SNES_CLASSID;$/;"	v
SNES_CONVERGED_FNORM_ABS	include/petscsnes.h	/^              SNES_CONVERGED_FNORM_ABS         =  2, \/* ||F|| < atol *\/$/;"	e	enum:__anon73
SNES_CONVERGED_FNORM_RELATIVE	include/petscsnes.h	/^              SNES_CONVERGED_FNORM_RELATIVE    =  3, \/* ||F|| < rtol*||F_initial|| *\/$/;"	e	enum:__anon73
SNES_CONVERGED_ITERATING	include/petscsnes.h	/^              SNES_CONVERGED_ITERATING          =  0} SNESConvergedReason;$/;"	e	enum:__anon73
SNES_CONVERGED_ITS	include/petscsnes.h	/^              SNES_CONVERGED_ITS               =  5, \/* maximum iterations reached *\/$/;"	e	enum:__anon73
SNES_CONVERGED_SNORM_RELATIVE	include/petscsnes.h	/^              SNES_CONVERGED_SNORM_RELATIVE    =  4, \/* Newton computed step size small; || delta x || < stol || x ||*\/$/;"	e	enum:__anon73
SNES_CONVERGED_TR_DELTA	include/petscsnes.h	/^              SNES_CONVERGED_TR_DELTA          =  7,$/;"	e	enum:__anon73
SNES_DIVERGED_FNORM_NAN	include/petscsnes.h	/^              SNES_DIVERGED_FNORM_NAN           = -4,$/;"	e	enum:__anon73
SNES_DIVERGED_FUNCTION_COUNT	include/petscsnes.h	/^              SNES_DIVERGED_FUNCTION_COUNT      = -2,$/;"	e	enum:__anon73
SNES_DIVERGED_FUNCTION_DOMAIN	include/petscsnes.h	/^              SNES_DIVERGED_FUNCTION_DOMAIN     = -1, \/* the new x location passed the function is not in the domain of F *\/$/;"	e	enum:__anon73
SNES_DIVERGED_INNER	include/petscsnes.h	/^              SNES_DIVERGED_INNER               = -7, \/* inner solve failed *\/$/;"	e	enum:__anon73
SNES_DIVERGED_LINEAR_SOLVE	include/petscsnes.h	/^              SNES_DIVERGED_LINEAR_SOLVE        = -3, \/* the linear solve failed *\/$/;"	e	enum:__anon73
SNES_DIVERGED_LINE_SEARCH	include/petscsnes.h	/^              SNES_DIVERGED_LINE_SEARCH         = -6, \/* the line search failed *\/$/;"	e	enum:__anon73
SNES_DIVERGED_LOCAL_MIN	include/petscsnes.h	/^              SNES_DIVERGED_LOCAL_MIN           = -8, \/* || J^T b || is small, implies converged to local minimum of F() *\/$/;"	e	enum:__anon73
SNES_DIVERGED_MAX_IT	include/petscsnes.h	/^              SNES_DIVERGED_MAX_IT              = -5,$/;"	e	enum:__anon73
SNES_FAS_ADDITIVE	include/petscsnesfas.h	/^typedef enum { SNES_FAS_MULTIPLICATIVE, SNES_FAS_ADDITIVE } SNESFASType;$/;"	e	enum:__anon61
SNES_FAS_MULTIPLICATIVE	include/petscsnesfas.h	/^typedef enum { SNES_FAS_MULTIPLICATIVE, SNES_FAS_ADDITIVE } SNESFASType;$/;"	e	enum:__anon61
SNES_FILE_CLASSID	include/petscsnes.h	86;"	d
SNES_FunctionEval	include/petsc-private/snesimpl.h	/^PETSC_EXTERN PetscLogEvent SNES_Solve, SNES_LineSearch, SNES_FunctionEval, SNES_JacobianEval, SNES_GSEval, SNES_NPCSolve;$/;"	v
SNES_GSEval	include/petsc-private/snesimpl.h	/^PETSC_EXTERN PetscLogEvent SNES_Solve, SNES_LineSearch, SNES_FunctionEval, SNES_JacobianEval, SNES_GSEval, SNES_NPCSolve;$/;"	v
SNES_JacobianEval	include/petsc-private/snesimpl.h	/^PETSC_EXTERN PetscLogEvent SNES_Solve, SNES_LineSearch, SNES_FunctionEval, SNES_JacobianEval, SNES_GSEval, SNES_NPCSolve;$/;"	v
SNES_LINESEARCH_ORDER_CUBIC	include/finclude/petscsnesdef.h	62;"	d
SNES_LINESEARCH_ORDER_CUBIC	include/petscsnes.h	478;"	d
SNES_LINESEARCH_ORDER_LINEAR	include/finclude/petscsnesdef.h	60;"	d
SNES_LINESEARCH_ORDER_LINEAR	include/petscsnes.h	476;"	d
SNES_LINESEARCH_ORDER_QUADRATIC	include/finclude/petscsnesdef.h	61;"	d
SNES_LINESEARCH_ORDER_QUADRATIC	include/petscsnes.h	477;"	d
SNES_LineSearch	include/petsc-private/snesimpl.h	/^PETSC_EXTERN PetscLogEvent SNES_Solve, SNES_LineSearch, SNES_FunctionEval, SNES_JacobianEval, SNES_GSEval, SNES_NPCSolve;$/;"	v
SNES_NCG_CD	include/petscsnes.h	/^  SNES_NCG_CD    = 4} SNESNCGType;$/;"	e	enum:__anon77
SNES_NCG_DY	include/petscsnes.h	/^  SNES_NCG_DY    = 3,$/;"	e	enum:__anon77
SNES_NCG_FR	include/petscsnes.h	/^  SNES_NCG_FR    = 0,$/;"	e	enum:__anon77
SNES_NCG_HS	include/petscsnes.h	/^  SNES_NCG_HS    = 2,$/;"	e	enum:__anon77
SNES_NCG_PRP	include/petscsnes.h	/^  SNES_NCG_PRP   = 1,$/;"	e	enum:__anon77
SNES_NGMRES_RESTART_DIFFERENCE	include/petscsnes.h	/^  SNES_NGMRES_RESTART_DIFFERENCE = 2} SNESNGMRESRestartType;$/;"	e	enum:__anon75
SNES_NGMRES_RESTART_NONE	include/petscsnes.h	/^  SNES_NGMRES_RESTART_NONE       = 0,$/;"	e	enum:__anon75
SNES_NGMRES_RESTART_PERIODIC	include/petscsnes.h	/^  SNES_NGMRES_RESTART_PERIODIC   = 1,$/;"	e	enum:__anon75
SNES_NGMRES_SELECT_DIFFERENCE	include/petscsnes.h	/^  SNES_NGMRES_SELECT_DIFFERENCE = 1,$/;"	e	enum:__anon76
SNES_NGMRES_SELECT_LINESEARCH	include/petscsnes.h	/^  SNES_NGMRES_SELECT_LINESEARCH = 2} SNESNGMRESSelectType;$/;"	e	enum:__anon76
SNES_NGMRES_SELECT_NONE	include/petscsnes.h	/^  SNES_NGMRES_SELECT_NONE       = 0,$/;"	e	enum:__anon76
SNES_NORM_DEFAULT	include/petscsnes.h	/^typedef enum {SNES_NORM_DEFAULT            = -1,$/;"	e	enum:__anon74
SNES_NORM_FINAL_ONLY	include/petscsnes.h	/^              SNES_NORM_FINAL_ONLY         =  3,$/;"	e	enum:__anon74
SNES_NORM_FUNCTION	include/petscsnes.h	/^              SNES_NORM_FUNCTION           =  1,$/;"	e	enum:__anon74
SNES_NORM_INITIAL_FINAL_ONLY	include/petscsnes.h	/^              SNES_NORM_INITIAL_FINAL_ONLY =  4} SNESNormType;$/;"	e	enum:__anon74
SNES_NORM_INITIAL_ONLY	include/petscsnes.h	/^              SNES_NORM_INITIAL_ONLY       =  2,$/;"	e	enum:__anon74
SNES_NORM_NONE	include/petscsnes.h	/^              SNES_NORM_NONE               =  0,$/;"	e	enum:__anon74
SNES_NPCSolve	include/petsc-private/snesimpl.h	/^PETSC_EXTERN PetscLogEvent SNES_Solve, SNES_LineSearch, SNES_FunctionEval, SNES_JacobianEval, SNES_GSEval, SNES_NPCSolve;$/;"	v
SNES_QN_RESTART_NONE	include/petscsnes.h	/^typedef enum {SNES_QN_RESTART_NONE     = 0,$/;"	e	enum:__anon79
SNES_QN_RESTART_PERIODIC	include/petscsnes.h	/^              SNES_QN_RESTART_PERIODIC = 2} SNESQNRestartType;$/;"	e	enum:__anon79
SNES_QN_RESTART_POWELL	include/petscsnes.h	/^              SNES_QN_RESTART_POWELL   = 1,$/;"	e	enum:__anon79
SNES_QN_SCALE_JACOBIAN	include/petscsnes.h	/^              SNES_QN_SCALE_JACOBIAN   = 3} SNESQNScaleType;$/;"	e	enum:__anon78
SNES_QN_SCALE_LINESEARCH	include/petscsnes.h	/^              SNES_QN_SCALE_LINESEARCH = 2,$/;"	e	enum:__anon78
SNES_QN_SCALE_NONE	include/petscsnes.h	/^typedef enum {SNES_QN_SCALE_NONE       = 0,$/;"	e	enum:__anon78
SNES_QN_SCALE_SHANNO	include/petscsnes.h	/^              SNES_QN_SCALE_SHANNO     = 1,$/;"	e	enum:__anon78
SNES_Solve	include/petsc-private/snesimpl.h	/^PETSC_EXTERN PetscLogEvent SNES_Solve, SNES_LineSearch, SNES_FunctionEval, SNES_JacobianEval, SNES_GSEval, SNES_NPCSolve;$/;"	v
SNES_VI_INF	include/petscsnes.h	566;"	d
SNES_VI_NINF	include/petscsnes.h	567;"	d
SOR_APPLY_LOWER	include/petscmat.h	/^              SOR_EISENSTAT=32,SOR_APPLY_UPPER=64,SOR_APPLY_LOWER=128} MatSORType;$/;"	e	enum:__anon97
SOR_APPLY_UPPER	include/petscmat.h	/^              SOR_EISENSTAT=32,SOR_APPLY_UPPER=64,SOR_APPLY_LOWER=128} MatSORType;$/;"	e	enum:__anon97
SOR_BACKWARD_SWEEP	include/petscmat.h	/^typedef enum {SOR_FORWARD_SWEEP=1,SOR_BACKWARD_SWEEP=2,SOR_SYMMETRIC_SWEEP=3,$/;"	e	enum:__anon97
SOR_EISENSTAT	include/petscmat.h	/^              SOR_EISENSTAT=32,SOR_APPLY_UPPER=64,SOR_APPLY_LOWER=128} MatSORType;$/;"	e	enum:__anon97
SOR_FORWARD_SWEEP	include/petscmat.h	/^typedef enum {SOR_FORWARD_SWEEP=1,SOR_BACKWARD_SWEEP=2,SOR_SYMMETRIC_SWEEP=3,$/;"	e	enum:__anon97
SOR_LOCAL_BACKWARD_SWEEP	include/petscmat.h	/^              SOR_LOCAL_FORWARD_SWEEP=4,SOR_LOCAL_BACKWARD_SWEEP=8,$/;"	e	enum:__anon97
SOR_LOCAL_FORWARD_SWEEP	include/petscmat.h	/^              SOR_LOCAL_FORWARD_SWEEP=4,SOR_LOCAL_BACKWARD_SWEEP=8,$/;"	e	enum:__anon97
SOR_LOCAL_SYMMETRIC_SWEEP	include/petscmat.h	/^              SOR_LOCAL_SYMMETRIC_SWEEP=12,SOR_ZERO_INITIAL_GUESS=16,$/;"	e	enum:__anon97
SOR_SYMMETRIC_SWEEP	include/petscmat.h	/^typedef enum {SOR_FORWARD_SWEEP=1,SOR_BACKWARD_SWEEP=2,SOR_SYMMETRIC_SWEEP=3,$/;"	e	enum:__anon97
SOR_ZERO_INITIAL_GUESS	include/petscmat.h	/^              SOR_LOCAL_SYMMETRIC_SWEEP=12,SOR_ZERO_INITIAL_GUESS=16,$/;"	e	enum:__anon97
SOURCEC	include/finclude/makefile	/^SOURCEC   =$/;"	m
SOURCEC	include/makefile	/^SOURCEC  =$/;"	m
SOURCEC	include/petsc-private/makefile	/^SOURCEC  =$/;"	m
SOURCEC	include/sieve/makefile	/^SOURCEC  =$/;"	m
SOURCEC	interfaces/lua/makefile	/^SOURCEC	  =$/;"	m
SOURCEC	interfaces/lua/src/makefile	/^SOURCEC	  = luasrc.c$/;"	m
SOURCEC	interfaces/makefile	/^SOURCEC	  =$/;"	m
SOURCEC	src/dm/dt/interface/makefile	/^SOURCEC  = dt.c$/;"	m
SOURCEC	src/dm/impls/mesh/f90-custom/makefile	/^SOURCEC  = zmeshf90.c zsectionf90.c$/;"	m
SOURCEC	src/dm/impls/mesh/ftn-custom/makefile	/^SOURCEC  = zmesh.c zsection.c$/;"	m
SOURCEC	src/dm/impls/mesh/makefile	/^SOURCEC  = ALE.cxx meshcreate.c mesh.c section.c meshbardhan.c meshdolfin.c meshexodus.c meshlagrit.c meshpcice.c meshzoltan.c$/;"	m
SOURCEC	src/dm/impls/moab/makefile	/^SOURCEC  = dmmoab.cxx$/;"	m
SOURCEC	src/dm/impls/plex/f90-custom/makefile	/^SOURCEC  = zplexf90.c$/;"	m
SOURCEC	src/dm/impls/plex/ftn-custom/makefile	/^SOURCEC  = zplex.c zplexsubmesh.c$/;"	m
SOURCEF	include/finclude/makefile	/^SOURCEF   =$/;"	m
SOURCEF	include/makefile	/^SOURCEF  =$/;"	m
SOURCEF	include/petsc-private/makefile	/^SOURCEF  =$/;"	m
SOURCEF	include/sieve/makefile	/^SOURCEF  =$/;"	m
SOURCEF	interfaces/lua/makefile	/^SOURCEF	  =$/;"	m
SOURCEF	interfaces/lua/src/makefile	/^SOURCEF	  =$/;"	m
SOURCEF	interfaces/makefile	/^SOURCEF	  =$/;"	m
SOURCEF	src/dm/dt/interface/makefile	/^SOURCEF  =$/;"	m
SOURCEF	src/dm/impls/mesh/f90-custom/makefile	/^SOURCEF  =$/;"	m
SOURCEF	src/dm/impls/mesh/ftn-custom/makefile	/^SOURCEF  =$/;"	m
SOURCEF	src/dm/impls/mesh/makefile	/^SOURCEF  =$/;"	m
SOURCEF	src/dm/impls/moab/makefile	/^SOURCEF  =$/;"	m
SOURCEF	src/dm/impls/plex/f90-custom/makefile	/^SOURCEF  =$/;"	m
SOURCEF	src/dm/impls/plex/ftn-custom/makefile	/^SOURCEF  =$/;"	m
SOURCEH	include/finclude/makefile	/^SOURCEH   = petsc.h petscsys.h petsclog.h petscvec.h petscsnes.h petscdm.h petscdmda.h petscdmmesh.h petscdraw.h petscmat.h \\$/;"	m
SOURCEH	include/makefile	/^SOURCEH  = petscsys.h$/;"	m
SOURCEH	include/petsc-private/makefile	/^SOURCEH  = petscimpl.h$/;"	m
SOURCEH	include/sieve/makefile	/^SOURCEH  = ALE_args.hh ALE_mem.hh FEMProblem.hh ISieve.hh Partitioner.hh SieveBuilder.hh UFCProblem.hh \\$/;"	m
SOURCEH	interfaces/lua/makefile	/^SOURCEH	  =$/;"	m
SOURCEH	interfaces/lua/src/makefile	/^SOURCEH	  =$/;"	m
SOURCEH	interfaces/makefile	/^SOURCEH	  =$/;"	m
SOURCEH	src/dm/dt/interface/makefile	/^SOURCEH  =$/;"	m
SOURCEH	src/dm/dt/makefile	/^SOURCEH	 = ..\/..\/..\/include\/petscdt.h$/;"	m
SOURCEH	src/dm/impls/mesh/f90-custom/makefile	/^SOURCEH  =$/;"	m
SOURCEH	src/dm/impls/mesh/ftn-custom/makefile	/^SOURCEH  =$/;"	m
SOURCEH	src/dm/impls/mesh/makefile	/^SOURCEH  =$/;"	m
SOURCEH	src/dm/impls/moab/makefile	/^SOURCEH  =$/;"	m
SOURCEH	src/dm/impls/plex/f90-custom/makefile	/^SOURCEH  =$/;"	m
SOURCEH	src/dm/impls/plex/ftn-custom/makefile	/^SOURCEH  =$/;"	m
SUBMANSEC	src/dm/impls/mesh/makefile	/^SUBMANSEC= DMMESH$/;"	m
SUBSET_NONZERO_PATTERN	include/petscmat.h	/^typedef enum {DIFFERENT_NONZERO_PATTERN,SUBSET_NONZERO_PATTERN,SAME_NONZERO_PATTERN,SAME_PRECONDITIONER} MatStructure;$/;"	e	enum:__anon87
SUNDIALS_ADAMS	include/petscts.h	/^typedef enum { SUNDIALS_ADAMS=1,SUNDIALS_BDF=2} TSSundialsLmmType;$/;"	e	enum:__anon71
SUNDIALS_BDF	include/petscts.h	/^typedef enum { SUNDIALS_ADAMS=1,SUNDIALS_BDF=2} TSSundialsLmmType;$/;"	e	enum:__anon71
SUNDIALS_CLASSICAL_GS	include/petscts.h	/^typedef enum { SUNDIALS_MODIFIED_GS = 1,SUNDIALS_CLASSICAL_GS = 2 } TSSundialsGramSchmidtType;$/;"	e	enum:__anon72
SUNDIALS_MODIFIED_GS	include/petscts.h	/^typedef enum { SUNDIALS_MODIFIED_GS = 1,SUNDIALS_CLASSICAL_GS = 2 } TSSundialsGramSchmidtType;$/;"	e	enum:__anon72
SUNDIALS_UNMODIFIED_GS	include/finclude/petscts.h	81;"	d
ScatterMode	include/finclude/petscvecdef.h	17;"	d
ScatterMode	include/petscvec.h	/^typedef enum {SCATTER_FORWARD=0, SCATTER_REVERSE=1, SCATTER_FORWARD_LOCAL=2, SCATTER_REVERSE_LOCAL=3, SCATTER_LOCAL=2} ScatterMode;$/;"	t	typeref:enum:__anon37
Scientific	config/BuildSystem/config/packages/scientificpython.py	/^        import Scientific.Functions.Derivatives$/;"	i
Scientific	config/BuildSystem/config/packages/scientificpython.py	/^        self.framework.logPrint('ERROR: Could not import Scientific Python: '+str(e))$/;"	i
Script	config/BuildSystem/script.py	/^class Script(logger.Logger):$/;"	c
Section	include/sieve/Field.hh	/^    Section(MPI_Comm comm, const int debug = 0) : ParallelObject(comm, debug) {$/;"	f	class:ALE::Section
Section	include/sieve/Field.hh	/^    Section(const Obj<atlas_type>& atlas) : ParallelObject(atlas->comm(), atlas->debug()), _atlas(atlas), _atlasNew(NULL), _array(NULL) {};$/;"	f	class:ALE::Section
Section	include/sieve/Field.hh	/^  class Section : public ALE::ParallelObject {$/;"	c	namespace:ALE
SectionCompletion	include/sieve/SectionCompletion.hh	/^    class SectionCompletion {$/;"	c	namespace:ALE::New
SectionDistributionTest	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^PetscErrorCode SectionDistributionTest(const Options *options)$/;"	f
SectionGetArray	src/dm/impls/mesh/mesh.c	/^PetscErrorCode SectionGetArray(DM dm, const char name[], PetscInt *numElements, PetscInt *fiberDim, PetscScalar *array[])$/;"	f
SectionInt	include/finclude/petscdmmeshdef.h	12;"	d
SectionInt	include/petscdmmesh.h	/^typedef struct _p_SectionInt* SectionInt;$/;"	t	typeref:struct:_p_SectionInt
SectionIntAddSpace	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionIntAddSpace(SectionInt section)$/;"	f
SectionIntAllocate	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionIntAllocate(SectionInt section)$/;"	f
SectionIntClear	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionIntClear(SectionInt section)$/;"	f
SectionIntComplete	src/dm/impls/mesh/section.c	/^PetscErrorCode SectionIntComplete(SectionInt section)$/;"	f
SectionIntCreate	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionIntCreate(MPI_Comm comm, SectionInt *section)$/;"	f
SectionIntDestroy	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionIntDestroy(SectionInt *section)$/;"	f
SectionIntDistribute	src/dm/impls/mesh/section.c	/^PetscErrorCode SectionIntDistribute(SectionInt serialSection, DM parallelMesh, SectionInt *parallelSection)$/;"	f
SectionIntGetBundle	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionIntGetBundle(SectionInt section, ALE::Obj<PETSC_MESH_TYPE>& b)$/;"	f
SectionIntGetFiberDimension	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionIntGetFiberDimension(SectionInt section, PetscInt point, PetscInt *size)$/;"	f
SectionIntGetFibration	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionIntGetFibration(SectionInt section, const PetscInt field, SectionInt *subsection)$/;"	f
SectionIntGetSection	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionIntGetSection(SectionInt section, ALE::Obj<PETSC_MESH_TYPE::int_section_type>& s)$/;"	f
SectionIntGetSize	src/dm/impls/mesh/section.c	/^PetscErrorCode SectionIntGetSize(SectionInt section, PetscInt *size)$/;"	f
SectionIntOps	include/petsc-private/meshimpl.h	/^typedef struct _SectionIntOps *SectionIntOps;$/;"	t	typeref:struct:_SectionIntOps
SectionIntRestrict	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionIntRestrict(SectionInt section, PetscInt point, PetscInt *values[])$/;"	f
SectionIntRestrictClosureWithArray	src/dm/impls/mesh/section.c	/^PetscErrorCode SectionIntRestrictClosureWithArray(SectionInt section, DM dm, PetscInt point, PetscInt n, PetscInt values[])$/;"	f
SectionIntSet	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionIntSet(SectionInt section, PetscInt val)$/;"	f
SectionIntSetBundle	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionIntSetBundle(SectionInt section, const ALE::Obj<PETSC_MESH_TYPE>& b)$/;"	f
SectionIntSetFiberDimension	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionIntSetFiberDimension(SectionInt section, PetscInt point, const PetscInt size)$/;"	f
SectionIntSetFiberDimensionField	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionIntSetFiberDimensionField(SectionInt section, PetscInt point, const PetscInt size, const PetscInt field)$/;"	f
SectionIntSetSection	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionIntSetSection(SectionInt section, const ALE::Obj<PETSC_MESH_TYPE::int_section_type>& s)$/;"	f
SectionIntUpdate	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionIntUpdate(SectionInt section, PetscInt point, const PetscInt values[], InsertMode mode)$/;"	f
SectionIntUpdateClosure	src/dm/impls/mesh/section.c	/^PetscErrorCode SectionIntUpdateClosure(SectionInt section, DM dm, PetscInt point, PetscInt values[], InsertMode mode)$/;"	f
SectionIntView	src/dm/impls/mesh/section.c	/^PetscErrorCode SectionIntView(SectionInt section, PetscViewer viewer)$/;"	f
SectionIntView_Sieve	src/dm/impls/mesh/section.c	/^PetscErrorCode SectionIntView_Sieve(SectionInt section, PetscViewer viewer)$/;"	f
SectionIntZero	src/dm/impls/mesh/section.c	/^PetscErrorCode SectionIntZero(SectionInt section)$/;"	f
SectionInt_View	include/petsc-private/meshimpl.h	/^PETSC_EXTERN PetscLogEvent SectionInt_View;$/;"	v
SectionInt_View	src/dm/impls/mesh/section.c	/^PetscLogEvent SectionInt_View;$/;"	v
SectionPair_View	src/dm/impls/mesh/section.c	/^PetscLogEvent SectionPair_View;$/;"	v
SectionReal	include/finclude/petscdmmeshdef.h	11;"	d
SectionReal	include/petscdmmesh.h	/^typedef struct _p_SectionReal* SectionReal;$/;"	t	typeref:struct:_p_SectionReal
SectionRealAXPY	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealAXPY(SectionReal section, DM dm, PetscScalar alpha, SectionReal X)$/;"	f
SectionRealAddSpace	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealAddSpace(SectionReal section)$/;"	f
SectionRealAllocate	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealAllocate(SectionReal section)$/;"	f
SectionRealClear	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealClear(SectionReal section)$/;"	f
SectionRealComplete	src/dm/impls/mesh/section.c	/^PetscErrorCode SectionRealComplete(SectionReal section)$/;"	f
SectionRealCreate	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealCreate(MPI_Comm comm, SectionReal *section)$/;"	f
SectionRealCreateLocalVector	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealCreateLocalVector(SectionReal section, Vec *localVec)$/;"	f
SectionRealDestroy	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealDestroy(SectionReal *section)$/;"	f
SectionRealDistribute	src/dm/impls/mesh/section.c	/^PetscErrorCode SectionRealDistribute(SectionReal serialSection, DM parallelMesh, SectionReal *parallelSection)$/;"	f
SectionRealDuplicate	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealDuplicate(SectionReal section, SectionReal *newSection)$/;"	f
SectionRealGetBundle	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealGetBundle(SectionReal section, ALE::Obj<PETSC_MESH_TYPE>& b)$/;"	f
SectionRealGetFiberDimension	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealGetFiberDimension(SectionReal section, PetscInt point, PetscInt *size)$/;"	f
SectionRealGetFibration	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealGetFibration(SectionReal section, const PetscInt field, SectionReal *subsection)$/;"	f
SectionRealGetSection	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealGetSection(SectionReal section, ALE::Obj<PETSC_MESH_TYPE::real_section_type>& s)$/;"	f
SectionRealGetSize	src/dm/impls/mesh/section.c	/^PetscErrorCode SectionRealGetSize(SectionReal section, PetscInt *size)$/;"	f
SectionRealNorm	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealNorm(SectionReal section, DM dm, NormType type, PetscReal *val)$/;"	f
SectionRealOps	include/petsc-private/meshimpl.h	/^typedef struct _SectionRealOps *SectionRealOps;$/;"	t	typeref:struct:_SectionRealOps
SectionRealRestrict	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealRestrict(SectionReal section, PetscInt point, PetscScalar *values[])$/;"	f
SectionRealRestrictClosure	src/dm/impls/mesh/section.c	/^PetscErrorCode SectionRealRestrictClosure(SectionReal section, DM dm, PetscInt point, const PetscScalar *values[])$/;"	f
SectionRealRestrictClosureWithArray	src/dm/impls/mesh/section.c	/^PetscErrorCode SectionRealRestrictClosureWithArray(SectionReal section, DM dm, PetscInt point, PetscInt n, PetscScalar values[])$/;"	f
SectionRealSet	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealSet(SectionReal section, PetscReal val)$/;"	f
SectionRealSetBundle	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealSetBundle(SectionReal section, const ALE::Obj<PETSC_MESH_TYPE>& b)$/;"	f
SectionRealSetFiberDimension	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealSetFiberDimension(SectionReal section, PetscInt point, const PetscInt size)$/;"	f
SectionRealSetFiberDimensionField	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealSetFiberDimensionField(SectionReal section, PetscInt point, const PetscInt size, const PetscInt field)$/;"	f
SectionRealSetSection	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealSetSection(SectionReal section, const ALE::Obj<PETSC_MESH_TYPE::real_section_type>& s)$/;"	f
SectionRealToVec	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealToVec(SectionReal section, VecScatter scatter, ScatterMode mode, Vec vec)$/;"	f
SectionRealToVecDM	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealToVecDM(SectionReal section, DM dm, ScatterMode mode, Vec vec)$/;"	f
SectionRealUpdate	src/dm/impls/mesh/section.c	/^PetscErrorCode  SectionRealUpdate(SectionReal section, PetscInt point, const PetscScalar values[], InsertMode mode)$/;"	f
SectionRealUpdateClosure	src/dm/impls/mesh/section.c	/^PetscErrorCode SectionRealUpdateClosure(SectionReal section, DM dm, PetscInt point, PetscScalar values[], InsertMode mode)$/;"	f
SectionRealView	src/dm/impls/mesh/section.c	/^PetscErrorCode SectionRealView(SectionReal section, PetscViewer viewer)$/;"	f
SectionRealView_Sieve	src/dm/impls/mesh/section.c	/^PetscErrorCode SectionRealView_Sieve(SectionReal section, PetscViewer viewer)$/;"	f
SectionRealZero	src/dm/impls/mesh/section.c	/^PetscErrorCode SectionRealZero(SectionReal section)$/;"	f
SectionReal_View	include/petsc-private/meshimpl.h	/^PETSC_EXTERN PetscLogEvent SectionReal_View;$/;"	v
SectionReal_View	src/dm/impls/mesh/section.c	/^PetscLogEvent SectionReal_View;$/;"	v
SectionSerializer	include/sieve/IField.hh	/^  class SectionSerializer {$/;"	c	namespace:ALE
SectionTest	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^PetscErrorCode SectionTest(const Options *options)$/;"	f
SectionTest	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^PetscErrorCode SectionTest(const Options *options)$/;"	f
SectionTest	src/dm/impls/mesh/examples/tests/sectionTest.hh	/^    class SectionTest {$/;"	c	namespace:ALE::Test
SectionTests	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^PetscErrorCode SectionTests(const Options *options)$/;"	f
SectionToISectionTest	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^PetscErrorCode SectionToISectionTest(const Options *options)$/;"	f
SectionView_Sieve_Ascii	include/petscdmmesh_viewers.hh	/^  PetscErrorCode SectionView_Sieve_Ascii(const Obj<Bundle>& bundle, const Obj<Section>& s, const char name[], PetscViewer viewer, int enforceDim = -1)$/;"	f
SegmentVisitor	include/sieve/Generator.hh	/^        SegmentVisitor(const int dim, int segmentlist[], typename Mesh::numbering_type& vNumbering) : dim(dim), segmentlist(segmentlist), vNumbering(vNumbering), idx(0), v(0) {};$/;"	f	class:ALE::Triangle::Generator::SegmentVisitor
SegmentVisitor	include/sieve/Generator.hh	/^      class SegmentVisitor {$/;"	c	class:ALE::Triangle::Generator
Select1st	include/petscdmmesh.hh	/^struct Select1st : public std::unary_function<Pair, typename Pair::first_type>$/;"	s
SelectSource	include/petscdmmesh.hh	/^struct SelectSource : public std::unary_function<Arrow, typename Arrow::source_type>$/;"	s
Selection	include/sieve/Selection.hh	/^  class Selection {$/;"	c	namespace:ALE
SendDistribution	src/dm/impls/mesh/examples/tests/sieve2-old.cxx	/^PetscErrorCode SendDistribution(const Obj<ALE::Mesh>& mesh, const Obj<ALE::Mesh>& meshNew)$/;"	f
SendOverlap	include/sieve/Overlap.hh	/^  SendOverlap(MPI_Comm comm, const int debug = 0) : Overlap<Point,Rank>(comm, debug) {};$/;"	f	class:PETSc::SendOverlap
SendOverlap	include/sieve/Overlap.hh	/^class SendOverlap : public Overlap<Point,Rank> {$/;"	c	namespace:PETSc
Sequence	include/sieve/ISieve.hh	/^      Sequence(const point_type data[], const int begin, const int end) : _data(data), _begin(begin), _end(end) {};$/;"	f	class:ALE::IFSieveDef::Sequence
Sequence	include/sieve/ISieve.hh	/^    class Sequence {$/;"	c	namespace:ALE::IFSieveDef
Sequence	include/sieve/Overlap.hh	/^class Sequence {$/;"	c	namespace:PETSc
SerialSplitDoubletTetrahedronTest	src/dm/impls/mesh/examples/tests/refinementTest.cxx	/^PetscErrorCode SerialSplitDoubletTetrahedronTest(const Options *options)$/;"	f
SerialTetrahedronTest	src/dm/impls/mesh/examples/tests/refinementTest.cxx	/^PetscErrorCode SerialTetrahedronTest(const Options *options)$/;"	f
ServerRootMap	config/BuildSystem/build/templates/SIDL.py	/^class ServerRootMap (project.ProjectPath):$/;"	c
ServicePython	include/web/AMS.py	/^class ServicePython(JSONProxy):$/;"	c
Set	config/BuildSystem/config/compile/SIDL.py	/^    from sets import Set$/;"	i
Set	config/BuildSystem/config/setsBackport.py	/^class Set(BaseSet):$/;"	c
Set	config/BuildSystem/config/setsOrdered.py	/^class Set(BaseSet):$/;"	c
SetFromMap	include/sieve/Field.hh	/^    SetFromMap(const Map& map): _map(map) {};$/;"	f	class:ALE::SetFromMap
SetFromMap	include/sieve/Field.hh	/^  class SetFromMap {$/;"	c	namespace:ALE
SetFromOptions	include/petsc-private/sfimpl.h	/^  PetscErrorCode (*SetFromOptions)(PetscSF);$/;"	m	struct:_PetscSFOps
SetType	bin/matlab/classes/PetscViewer.m.html	/^    function SetType(obj,name)$/;"	f
SetUp	include/petsc-private/sfimpl.h	/^  PetscErrorCode (*SetUp)(PetscSF);$/;"	m	struct:_PetscSFOps
SetsTest	config/BuildSystem/config/setsOrdered.py	/^    class SetsTest(unittest.TestCase):$/;"	c
SetupDiscretization_UFC	include/sieve/UFC.hh	/^void SetupDiscretization_UFC(ALE::Obj<PETSC_MESH_TYPE> m, ufc::form * form) {$/;"	f
SetupField_UFC	include/sieve/UFC.hh	/^void SetupField_UFC(ALE::Obj<PETSC_MESH_TYPE> m, const ALE::Obj<PETSC_MESH_TYPE::real_section_type>& s, ufc::form * form, const int cellMarker = 2, const bool noUpdate = false) {$/;"	f
SetupSection	src/dm/impls/plex/examples/tests/ex3.c	/^PetscErrorCode SetupSection(DM dm, AppCtx *user)$/;"	f
SharedLinker	config/BuildSystem/build/processor.py	/^class SharedLinker(Linker):$/;"	c
SharedLinker	config/BuildSystem/config/compile/C.py	/^class SharedLinker(config.compile.processor.Processor):$/;"	c
SharedLinker	config/BuildSystem/config/compile/CUDA.py	/^class SharedLinker(config.compile.C.SharedLinker):$/;"	c
SharedLinker	config/BuildSystem/config/compile/Cxx.py	/^class SharedLinker(config.compile.processor.Processor):$/;"	c
ShellTest	config/BuildSystem/config/regression/shellTest.py	/^class ShellTest (unittest.TestCase):$/;"	c
Sieve	include/sieve/ISieve.hh	/^      typedef typename Mesh::Sieve                    Sieve;$/;"	t	class:ALE::ISieveVisitor::MeshNConeRetriever
Sieve	include/sieve/Sieve.hh	/^      Sieve(MPI_Comm comm = PETSC_COMM_SELF, const int& debug = 0) : ALE::Sifter<Point_, Point_, Color_, ::boost::multi_index::composite_key_compare<std::less<Point_>, std::less<Color_>, std::less<Point_> >, SieveDef::RecContainer<Point_, SieveDef::Rec<Point_, Marker_> >, SieveDef::RecContainer<Point_, SieveDef::Rec<Point_, Marker_> > >(comm, debug), doStratify(false), maxDepth(-1), maxHeight(-1), graphDiameter(-1) {$/;"	f	class:ALE::Sieve
Sieve	include/sieve/Sieve.hh	/^    class Sieve : public ALE::Sifter<Point_, Point_, Color_, ::boost::multi_index::composite_key_compare<std::less<Point_>, std::less<Color_>, std::less<Point_> >, SieveDef::RecContainer<Point_, SieveDef::Rec<Point_, Marker_> >, SieveDef::RecContainer<Point_, SieveDef::Rec<Point_, Marker_> > > {$/;"	c	namespace:ALE
SieveAlg	include/sieve/SieveAlgorithms.hh	/^  class SieveAlg {$/;"	c	namespace:ALE
SieveBuilder	include/sieve/SieveBuilder.hh	/^  class SieveBuilder {$/;"	c	namespace:ALE
SieveDef	include/sieve/Sieve.hh	/^  namespace SieveDef {$/;"	n	namespace:ALE
SieveISectionPartitionTest	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^PetscErrorCode SieveISectionPartitionTest(const Options *options)$/;"	f
SieveLabel	include/petsc-private/meshimpl.h	/^typedef struct Sieve_Label *SieveLabel;$/;"	t	typeref:struct:Sieve_Label
SieveTests	src/dm/impls/mesh/examples/tests/sieveTests.py	/^class SieveTests(script.Script):$/;"	c
Sieve_Label	include/petsc-private/meshimpl.h	/^struct Sieve_Label {$/;"	s
Sifter	include/sieve/Sifter.hh	/^    Sifter(MPI_Comm comm = PETSC_COMM_SELF, const int& debug = 0) :$/;"	f	class:ALE::Sifter
Sifter	include/sieve/Sifter.hh	/^  class Sifter : public ASifter<Source_, Target_, Color_, SifterDef::uniColor, SupportCompare_, SourceCtnr_, TargetCtnr_> {$/;"	c	namespace:ALE
SifterBuilder	src/dm/impls/mesh/examples/tests/unitTests.hh	/^    class SifterBuilder {$/;"	c	namespace:ALE::Test
SifterDef	include/sieve/Sifter.hh	/^  namespace SifterDef {$/;"	n	namespace:ALE
SifterSerializer	include/sieve/Sifter.hh	/^  class SifterSerializer {$/;"	c	namespace:ALE
Simple	include/sieve/Partitioner.hh	/^  namespace Simple {$/;"	n	namespace:ALE
SimpleArrow	include/sieve/ISieve.hh	/^    SimpleArrow(const source_type& s, const target_type& t) : source(s), target(t) {};$/;"	f	struct:ALE::SimpleArrow
SimpleArrow	include/sieve/ISieve.hh	/^  struct SimpleArrow {$/;"	s	namespace:ALE
SimpleCopy	include/sieve/ParallelMapping.hh	/^    class SimpleCopy {$/;"	c	namespace:ALE::Pullback
SimpleFaceRecognizer	include/sieve/Partitioner.hh	/^      SimpleFaceRecognizer(Mesh& mesh, const int debug = 0) {$/;"	f	class:ALE::Partitioner::SimpleFaceRecognizer
SimpleFaceRecognizer	include/sieve/Partitioner.hh	/^    class SimpleFaceRecognizer {$/;"	c	class:ALE::Partitioner
SimpleTest	src/dm/impls/mesh/examples/tests/meshing.cxx	/^void SimpleTest(MPI_Comm comm, Options * options) {$/;"	f
SizeSection	include/sieve/Sections.hh	/^      SizeSection(const Obj<section_type>& section) : ParallelObject(MPI_COMM_SELF, section->debug()), _section(section) {};$/;"	f	class:ALE::New::SizeSection
SizeSection	include/sieve/Sections.hh	/^    class SizeSection : public ALE::ParallelObject {$/;"	c	namespace:ALE::New
SizeVisitor	include/sieve/ISieve.hh	/^      SizeVisitor(const Section& s) : section(s), size(0) {};$/;"	f	class:ALE::ISieveVisitor::SizeVisitor
SizeVisitor	include/sieve/ISieve.hh	/^    class SizeVisitor {$/;"	c	namespace:ALE::ISieveVisitor
SizeWithBCVisitor	include/sieve/ISieve.hh	/^      SizeWithBCVisitor(PetscSection s) : section(s), size(0), fieldSize(NULL), numFields(0) {};$/;"	f	class:ALE::ISieveVisitor::SizeWithBCVisitor
SizeWithBCVisitor	include/sieve/ISieve.hh	/^      SizeWithBCVisitor(PetscSection s, PetscInt *fieldSize) : section(s), size(0), fieldSize(fieldSize) {$/;"	f	class:ALE::ISieveVisitor::SizeWithBCVisitor
SizeWithBCVisitor	include/sieve/ISieve.hh	/^      SizeWithBCVisitor(const Section& s) : section(s), size(0) {};$/;"	f	class:ALE::ISieveVisitor::SizeWithBCVisitor
SizeWithBCVisitor	include/sieve/ISieve.hh	/^    class SizeWithBCVisitor {$/;"	c	namespace:ALE::ISieveVisitor
SizeWithBCVisitor	include/sieve/ISieve.hh	/^    class SizeWithBCVisitor<Sieve,PetscSection> {$/;"	c	namespace:ALE::ISieveVisitor
SliceBasicTest	src/dm/impls/mesh/examples/tests/xsieveTest.hh	/^      static PetscErrorCode SliceBasicTest(const ALE::Obj<XSieve_>& xsieve, const ALE::ArgDB& argDB, const char* xsieveName = NULL)$/;"	f	struct:ALE::Test::XSieveTester
SocketServer	config/BuildSystem/RDict.py	/^    import SocketServer$/;"	i
SourceDB	config/BuildSystem/config/packages/BlasLapack.py	/^from sourceDatabase import SourceDB$/;"	i
SourceDB	config/BuildSystem/sourceDatabase.py	/^class SourceDB (dict, logger.Logger):$/;"	c
SourceDatabase	config/builder.py	/^class SourceDatabase(logger.Logger):$/;"	c
SourceDatabaseDict	config/builder.py	/^class SourceDatabaseDict(object):$/;"	c
SourceFileManager	config/builder.py	/^class SourceFileManager(logger.Logger):$/;"	c
SourceNode	config/builder.py	/^class SourceNode:$/;"	c
Stage	include/petsclog.hh	/^    static LogStage& Stage(const std::string& name) {$/;"	f	class:PETSc::Log
StaticLinker	config/BuildSystem/config/compile/C.py	/^class StaticLinker(SharedLinker):$/;"	c
StaticLinker	config/BuildSystem/config/compile/CUDA.py	/^class StaticLinker(config.compile.C.StaticLinker):$/;"	c
StdoutLogger	config/cmakeboot.py	/^class StdoutLogger(object):$/;"	c
StdoutLogger	config/cmakegen.py	/^class StdoutLogger(object):$/;"	c
StoredAssemblyTest	src/dm/impls/mesh/examples/tests/operator1.cxx	/^PetscErrorCode StoredAssemblyTest(const Obj<ALE::Mesh>& m, Options *options)$/;"	f
StratificationTest	src/dm/impls/mesh/examples/tests/topology1.cxx	/^PetscErrorCode StratificationTest(const Obj<topology_type>& topology, Options *options)$/;"	f
StressTestBigCubeMeshSection	src/dm/impls/mesh/examples/tests/section1.cxx	/^class StressTestBigCubeMeshSection : public StressTestGeneralMeshSection$/;"	c	file:
StressTestBigSquareMeshSection	src/dm/impls/mesh/examples/tests/section1.cxx	/^class StressTestBigSquareMeshSection : public StressTestGeneralMeshSection$/;"	c	file:
StressTestCubeMeshSection	src/dm/impls/mesh/examples/tests/section1.cxx	/^class StressTestCubeMeshSection : public StressTestGeneralMeshSection$/;"	c	file:
StressTestCubeMeshSectionNonInterp	src/dm/impls/mesh/examples/tests/section1.cxx	/^class StressTestCubeMeshSectionNonInterp : public StressTestGeneralMeshSection$/;"	c	file:
StressTestCubeSieve	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^class StressTestCubeSieve : public StressTestGeneralSieve$/;"	c	file:
StressTestGeneralMeshSection	src/dm/impls/mesh/examples/tests/section1.cxx	/^class StressTestGeneralMeshSection : public CppUnit::TestFixture$/;"	c	file:
StressTestGeneralSieve	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^class StressTestGeneralSieve : public CppUnit::TestFixture$/;"	c	file:
StressTestHatSieve	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^class StressTestHatSieve : public CppUnit::TestFixture$/;"	c	file:
StressTestIConstantSection	src/dm/impls/mesh/examples/tests/isection1.cxx	/^class StressTestIConstantSection : public StressTestSection<ALE::IConstantSection<int, double> >$/;"	c	file:
StressTestIMesh	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^class StressTestIMesh : public CppUnit::TestFixture$/;"	c	file:
StressTestIUniformSection	src/dm/impls/mesh/examples/tests/isection1.cxx	/^class StressTestIUniformSection : public StressTestSection<ALE::IUniformSection<int, double> >$/;"	c	file:
StressTestSection	src/dm/impls/mesh/examples/tests/isection1.cxx	/^class StressTestSection : public CppUnit::TestFixture$/;"	c	file:
StressTestSifter	src/dm/impls/mesh/examples/tests/sifter1.cxx	/^class StressTestSifter : public CppUnit::TestFixture$/;"	c	file:
StressTestSquareMeshSection	src/dm/impls/mesh/examples/tests/section1.cxx	/^class StressTestSquareMeshSection : public StressTestGeneralMeshSection$/;"	c	file:
StressTestSquareSieve	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^class StressTestSquareSieve : public StressTestGeneralSieve$/;"	c	file:
StringIO	config/BuildSystem/patch.py	/^from StringIO import StringIO$/;"	i
SubProblem	include/sieve/FEMProblem.hh	/^      SubProblem(MPI_Comm comm, const int debug = 0) : ParallelObject(comm, debug) {};$/;"	f	class:ALE::Problem::SubProblem
SubProblem	include/sieve/FEMProblem.hh	/^    class SubProblem : public ParallelObject {$/;"	c	namespace:ALE::Problem
SubProblemView	include/sieve/FEMProblem.hh	/^    PetscErrorCode SubProblemView(SectionReal section, std::string name, PetscViewer viewer, int firstField = 0, int lastField = 0) {$/;"	f	namespace:ALE::Problem
SupportSection	include/sieve/Sections.hh	/^      SupportSection(const Obj<sieve_type>& sieve) : ParallelObject(MPI_COMM_SELF, sieve->debug()), _sieve(sieve), _supportSize(-1), _support(NULL) {};$/;"	f	class:ALE::New::SupportSection
SupportSection	include/sieve/Sections.hh	/^    class SupportSection : public ALE::ParallelObject {$/;"	c	namespace:ALE::New
SupportSequence	include/sieve/CartesianSieve.hh	/^      SupportSequence(const int dim, const int sizes[], const int numCells, const point_type& vertex) : _dim(dim), _sizes(sizes), _numCells(numCells), _vertex(vertex) {$/;"	f	class:ALE::CartesianSieveDef::SupportSequence
SupportSequence	include/sieve/CartesianSieve.hh	/^    class SupportSequence {$/;"	c	namespace:ALE::CartesianSieveDef
SupportSizeSection	include/sieve/Sections.hh	/^      SupportSizeSection(const Obj<bundle_type>& bundle, const Obj<sieve_type>& sieve, int minimumDepth = 0) : ParallelObject(MPI_COMM_SELF, bundle->debug()), _bundle(bundle), _sieve(sieve), _minDepth(minimumDepth) {};$/;"	f	class:ALE::New::SupportSizeSection
SupportSizeSection	include/sieve/Sections.hh	/^    class SupportSizeSection : public ALE::ParallelObject {$/;"	c	namespace:ALE::New
SupportSizer	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^      SupportSizer(const Obj<OverlapTest::sieve_type>& sieve) {this->_sieve = sieve;};$/;"	f	class:ALE::Test::SupportSizer
SupportSizer	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^    class SupportSizer {$/;"	c	namespace:ALE::Test
SupportTest	src/dm/impls/mesh/examples/tests/sifter1.cxx	/^PetscErrorCode SupportTest(const ALE::Obj<sifter_type>& sifter, Options *options)$/;"	f
SupportVisitor	include/sieve/ISieve.hh	/^      SupportVisitor(const Sieve& s, Visitor& v, bool useSource = true) : sieve(s), visitor(v), useSource(useSource) {};$/;"	f	class:ALE::ISieveVisitor::SupportVisitor
SupportVisitor	include/sieve/ISieve.hh	/^    class SupportVisitor {$/;"	c	namespace:ALE::ISieveVisitor
Switch	config/PETSc/FEM.py	/^    from Cxx import Break, CompoundStatement, Function, Pointer, Switch$/;"	i
TESTEXAMPLES_13	src/dm/dt/examples/tests/makefile	/^TESTEXAMPLES_13		  =$/;"	m
TESTEXAMPLES_13	src/dm/impls/mesh/examples/tests/makefile	/^TESTEXAMPLES_13           =$/;"	m
TESTEXAMPLES_C	src/dm/dt/examples/tests/makefile	/^TESTEXAMPLES_C		  = ex1.PETSc runex1 ex1.rm ex2.PETSc runex2 ex2.rm$/;"	m
TESTEXAMPLES_C	src/dm/impls/mesh/examples/tests/makefile	/^TESTEXAMPLES_C            =$/;"	m
TESTEXAMPLES_C	src/dm/impls/mesh/examples/tutorials/makefile	/^TESTEXAMPLES_C  		  =$/;"	m
TESTEXAMPLES_CTETGEN	src/dm/impls/plex/examples/tests/makefile	/^TESTEXAMPLES_CTETGEN = ex1.PETSc runex1 runex1_2 ex1.rm ex3.PETSc runex3 runex3_2 runex3_3 runex3_4 runex3_5 runex3_6 runex3_7 runex3_8 runex3_9 ex3.rm$/;"	m
TESTEXAMPLES_C_COMPLEX	src/dm/dt/examples/tests/makefile	/^TESTEXAMPLES_C_COMPLEX	  =$/;"	m
TESTEXAMPLES_C_COMPLEX	src/dm/impls/mesh/examples/tests/makefile	/^TESTEXAMPLES_C_COMPLEX    =$/;"	m
TESTEXAMPLES_C_COMPLEX	src/dm/impls/mesh/examples/tutorials/makefile	/^TESTEXAMPLES_C_COMPLEX	  =$/;"	m
TESTEXAMPLES_C_NOCOMPLEX	src/dm/dt/examples/tests/makefile	/^TESTEXAMPLES_C_NOCOMPLEX  =$/;"	m
TESTEXAMPLES_C_NOCOMPLEX	src/dm/impls/mesh/examples/tests/makefile	/^TESTEXAMPLES_C_NOCOMPLEX  =$/;"	m
TESTEXAMPLES_C_NOCOMPLEX	src/dm/impls/mesh/examples/tutorials/makefile	/^TESTEXAMPLES_C_NOCOMPLEX  =$/;"	m
TESTEXAMPLES_C_X	src/dm/dt/examples/tests/makefile	/^TESTEXAMPLES_C_X	  =$/;"	m
TESTEXAMPLES_C_X	src/dm/impls/mesh/examples/tests/makefile	/^TESTEXAMPLES_C_X        =$/;"	m
TESTEXAMPLES_C_X	src/dm/impls/mesh/examples/tutorials/makefile	/^TESTEXAMPLES_C_X  	  =$/;"	m
TESTEXAMPLES_C_X_MPIUNI	src/dm/dt/examples/tests/makefile	/^TESTEXAMPLES_C_X_MPIUNI =$/;"	m
TESTEXAMPLES_C_X_MPIUNI	src/dm/impls/mesh/examples/tests/makefile	/^TESTEXAMPLES_C_X_MPIUNI =$/;"	m
TESTEXAMPLES_C_X_MPIUNI	src/dm/impls/mesh/examples/tutorials/makefile	/^TESTEXAMPLES_C_X_MPIUNI =$/;"	m
TESTEXAMPLES_F90	src/dm/impls/mesh/examples/tests/makefile	/^TESTEXAMPLES_F90          =$/;"	m
TESTEXAMPLES_F90	src/dm/impls/mesh/examples/tutorials/makefile	/^TESTEXAMPLES_F90          =$/;"	m
TESTEXAMPLES_FORTRAN	src/dm/dt/examples/tests/makefile	/^TESTEXAMPLES_FORTRAN	  =$/;"	m
TESTEXAMPLES_FORTRAN	src/dm/impls/mesh/examples/tests/makefile	/^TESTEXAMPLES_FORTRAN      =$/;"	m
TESTEXAMPLES_FORTRAN	src/dm/impls/mesh/examples/tutorials/makefile	/^TESTEXAMPLES_FORTRAN	  =$/;"	m
TESTEXAMPLES_FORTRAN	src/dm/impls/plex/examples/tests/makefile	/^TESTEXAMPLES_FORTRAN = ex1f90.PETSc runex1f90 ex1f90.rm ex2f90.PETSc runex2f90 ex2f90.rm$/;"	m
TESTEXAMPLES_MOAB	src/dm/impls/moab/examples/tests/makefile	/^TESTEXAMPLES_MOAB = ex1.PETSc runex1 ex1.rm$/;"	m
TESTEXAMPLES_SIEVE	src/dm/impls/mesh/examples/tutorials/makefile	/^TESTEXAMPLES_SIEVE 		  = ex1.PETSc testex1_1 testex1_2 testex1_3 testex1_4 ex1.rm ex2.PETSc testex2_1 testex2_2 testex2_3 ex2.rm ex10.PETSc runex10 ex10.rm$/;"	m
TEXTBOX_FONT_SIZE	bin/TOPSInstaller.py	/^TEXTBOX_FONT_SIZE     = DEFAULT_FONT_SIZE$/;"	v
THREADCOMM_MAX	include/petscthreadcomm.h	/^typedef enum {THREADCOMM_SUM,THREADCOMM_PROD,THREADCOMM_MAX,THREADCOMM_MIN,THREADCOMM_MAXLOC,THREADCOMM_MINLOC} PetscThreadCommReductionOp;$/;"	e	enum:__anon33
THREADCOMM_MAXLOC	include/petscthreadcomm.h	/^typedef enum {THREADCOMM_SUM,THREADCOMM_PROD,THREADCOMM_MAX,THREADCOMM_MIN,THREADCOMM_MAXLOC,THREADCOMM_MINLOC} PetscThreadCommReductionOp;$/;"	e	enum:__anon33
THREADCOMM_MIN	include/petscthreadcomm.h	/^typedef enum {THREADCOMM_SUM,THREADCOMM_PROD,THREADCOMM_MAX,THREADCOMM_MIN,THREADCOMM_MAXLOC,THREADCOMM_MINLOC} PetscThreadCommReductionOp;$/;"	e	enum:__anon33
THREADCOMM_MINLOC	include/petscthreadcomm.h	/^typedef enum {THREADCOMM_SUM,THREADCOMM_PROD,THREADCOMM_MAX,THREADCOMM_MIN,THREADCOMM_MAXLOC,THREADCOMM_MINLOC} PetscThreadCommReductionOp;$/;"	e	enum:__anon33
THREADCOMM_PROD	include/petscthreadcomm.h	/^typedef enum {THREADCOMM_SUM,THREADCOMM_PROD,THREADCOMM_MAX,THREADCOMM_MIN,THREADCOMM_MAXLOC,THREADCOMM_MINLOC} PetscThreadCommReductionOp;$/;"	e	enum:__anon33
THREADCOMM_REDUCTION_COMPLETE	include/petsc-private/threadcommimpl.h	32;"	d
THREADCOMM_REDUCTION_NEW	include/petsc-private/threadcommimpl.h	31;"	d
THREADCOMM_REDUCTION_NONE	include/petsc-private/threadcommimpl.h	30;"	d
THREADCOMM_SUM	include/petscthreadcomm.h	/^typedef enum {THREADCOMM_SUM,THREADCOMM_PROD,THREADCOMM_MAX,THREADCOMM_MIN,THREADCOMM_MAXLOC,THREADCOMM_MINLOC} PetscThreadCommReductionOp;$/;"	e	enum:__anon33
THREADCOMM_THREAD_POSTED_LOCALRED	include/petsc-private/threadcommimpl.h	28;"	d
THREADCOMM_THREAD_WAITING_FOR_NEWRED	include/petsc-private/threadcommimpl.h	27;"	d
THREAD_JOB_COMPLETED	include/petsc-private/threadcommimpl.h	38;"	d
THREAD_JOB_NONE	include/petsc-private/threadcommimpl.h	35;"	d
THREAD_JOB_POSTED	include/petsc-private/threadcommimpl.h	36;"	d
THREAD_JOB_RECIEVED	include/petsc-private/threadcommimpl.h	37;"	d
TINY_MAX_SIZE	src/dm/impls/mesh/examples/tests/options0.cxx	4;"	d	file:
TINY_MAX_SIZE	src/dm/impls/mesh/examples/tests/options0.hh	4;"	d
TS	bin/matlab/classes/matlabheader.h	/^typedef PetscPointer TS;$/;"	t
TS	include/finclude/petsctsdef.h	10;"	d
TS	include/petscts.h	/^typedef struct _p_TS* TS;$/;"	t	typeref:struct:_p_TS
TSADAPTBASIC	include/finclude/petsctsdef.h	49;"	d
TSADAPTBASIC	include/petscts.h	396;"	d
TSADAPTCFL	include/finclude/petsctsdef.h	51;"	d
TSADAPTCFL	include/petscts.h	398;"	d
TSADAPTNONE	include/finclude/petsctsdef.h	50;"	d
TSADAPTNONE	include/petscts.h	397;"	d
TSALPHA	include/finclude/petsctsdef.h	31;"	d
TSALPHA	include/petscts.h	36;"	d
TSARKIMEX	include/finclude/petsctsdef.h	34;"	d
TSARKIMEX	include/petscts.h	39;"	d
TSARKIMEX1BEE	include/finclude/petsctsdef.h	54;"	d
TSARKIMEX1BEE	include/petscts.h	509;"	d
TSARKIMEX2C	include/finclude/petsctsdef.h	58;"	d
TSARKIMEX2C	include/petscts.h	513;"	d
TSARKIMEX2D	include/finclude/petsctsdef.h	59;"	d
TSARKIMEX2D	include/petscts.h	514;"	d
TSARKIMEX2E	include/finclude/petsctsdef.h	60;"	d
TSARKIMEX2E	include/petscts.h	515;"	d
TSARKIMEX3	include/finclude/petsctsdef.h	62;"	d
TSARKIMEX3	include/petscts.h	517;"	d
TSARKIMEX4	include/finclude/petsctsdef.h	65;"	d
TSARKIMEX4	include/petscts.h	520;"	d
TSARKIMEX5	include/finclude/petsctsdef.h	66;"	d
TSARKIMEX5	include/petscts.h	521;"	d
TSARKIMEXA2	include/finclude/petsctsdef.h	55;"	d
TSARKIMEXA2	include/petscts.h	510;"	d
TSARKIMEXARS122	include/finclude/petsctsdef.h	57;"	d
TSARKIMEXARS122	include/petscts.h	512;"	d
TSARKIMEXARS443	include/finclude/petsctsdef.h	64;"	d
TSARKIMEXARS443	include/petscts.h	519;"	d
TSARKIMEXBPR3	include/finclude/petsctsdef.h	63;"	d
TSARKIMEXBPR3	include/petscts.h	518;"	d
TSARKIMEXL2	include/finclude/petsctsdef.h	56;"	d
TSARKIMEXL2	include/petscts.h	511;"	d
TSARKIMEXPRSSP2	include/finclude/petsctsdef.h	61;"	d
TSARKIMEXPRSSP2	include/petscts.h	516;"	d
TSARKIMEXType	include/finclude/petsctsdef.h	53;"	d
TSARKIMEXType	include/petscts.h	/^typedef const char* TSARKIMEXType;$/;"	t
TSAdapt	include/finclude/petsctsdef.h	11;"	d
TSAdapt	include/petscts.h	/^typedef struct _p_TSAdapt *TSAdapt;$/;"	t	typeref:struct:_p_TSAdapt
TSAdaptType	include/finclude/petsctsdef.h	14;"	d
TSAdaptType	include/finclude/petsctsdef.h	48;"	d
TSAdaptType	include/petscts.h	/^typedef const char *TSAdaptType;$/;"	t
TSBEULER	include/finclude/petsctsdef.h	24;"	d
TSBEULER	include/petscts.h	29;"	d
TSCN	include/finclude/petsctsdef.h	26;"	d
TSCN	include/petscts.h	31;"	d
TSConvergedReason	include/finclude/petsctsdef.h	16;"	d
TSConvergedReason	include/petscts.h	/^} TSConvergedReason;$/;"	t	typeref:enum:__anon68
TSConvergedReasons	include/petscts.h	/^PETSC_EXTERN const char *const*TSConvergedReasons;$/;"	v
TSEIMEX	include/finclude/petsctsdef.h	36;"	d
TSEIMEX	include/petscts.h	41;"	d
TSEIMEXS2	include/finclude/petsctsdef.h	87;"	d
TSEIMEXS3	include/finclude/petsctsdef.h	88;"	d
TSEIMEXS4	include/finclude/petsctsdef.h	89;"	d
TSEIMEXType	include/finclude/petsctsdef.h	86;"	d
TSEIMEXType	include/petscts.h	495;"	d
TSEULER	include/finclude/petsctsdef.h	23;"	d
TSEULER	include/petscts.h	28;"	d
TSEquationType	include/finclude/petsctsdef.h	15;"	d
TSEquationType	include/petscts.h	/^} TSEquationType;$/;"	t	typeref:enum:__anon67
TSEquationTypes	include/petscts.h	/^PETSC_EXTERN const char *const*TSEquationTypes;$/;"	v
TSExactFinalTimeOption	include/finclude/petsctsdef.h	17;"	d
TSExactFinalTimeOption	include/petscts.h	/^typedef enum {TS_EXACTFINALTIME_STEPOVER=0,TS_EXACTFINALTIME_INTERPOLATE=1,TS_EXACTFINALTIME_MATCHSTEP=2} TSExactFinalTimeOption;$/;"	t	typeref:enum:__anon69
TSExactFinalTimeOptions	include/petscts.h	/^PETSC_EXTERN const char *const TSExactFinalTimeOptions[];$/;"	v
TSGL	include/finclude/petsctsdef.h	32;"	d
TSGL	include/petscts.h	37;"	d
TSGLACCEPT_ALWAYS	include/petscts.h	465;"	d
TSGLADAPT_BOTH	include/finclude/petsctsdef.h	46;"	d
TSGLADAPT_BOTH	include/petscts.h	443;"	d
TSGLADAPT_NONE	include/finclude/petsctsdef.h	44;"	d
TSGLADAPT_NONE	include/petscts.h	441;"	d
TSGLADAPT_SIZE	include/finclude/petsctsdef.h	45;"	d
TSGLADAPT_SIZE	include/petscts.h	442;"	d
TSGLAcceptFunction	include/petscts.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*TSGLAcceptFunction)(TS,PetscReal,PetscReal,const PetscReal[],PetscBool *);$/;"	t
TSGLAcceptType	include/petscts.h	/^typedef const char *TSGLAcceptType;$/;"	t
TSGLAdapt	include/petscts.h	/^typedef struct _p_TSGLAdapt *TSGLAdapt;$/;"	t	typeref:struct:_p_TSGLAdapt
TSGLAdaptType	include/finclude/petsctsdef.h	43;"	d
TSGLAdaptType	include/petscts.h	/^typedef const char *TSGLAdaptType;$/;"	t
TSGLType	include/petscts.h	/^typedef const char* TSGLType;$/;"	t
TSGL_IRKS	include/petscts.h	478;"	d
TSIFunction	include/petscts.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*TSIFunction)(TS,PetscReal,Vec,Vec,Vec,void*);$/;"	t
TSIJacobian	include/petscts.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*TSIJacobian)(TS,PetscReal,Vec,Vec,PetscReal,Mat*,Mat*,MatStructure*,void*);$/;"	t
TSList	include/petscts.h	/^PETSC_EXTERN PetscFunctionList TSList;$/;"	v
TSMonitorDMDARayCtx	include/petscts.h	/^} TSMonitorDMDARayCtx;$/;"	t	typeref:struct:__anon70
TSMonitorDrawCtx	include/petscts.h	/^typedef struct _n_TSMonitorDrawCtx*  TSMonitorDrawCtx;$/;"	t	typeref:struct:_n_TSMonitorDrawCtx
TSMonitorLGCtx	include/petscts.h	/^typedef struct _n_TSMonitorLGCtx*  TSMonitorLGCtx;$/;"	t	typeref:struct:_n_TSMonitorLGCtx
TSMonitorSPEigCtx	include/petscts.h	/^typedef struct _n_TSMonitorSPEigCtx*  TSMonitorSPEigCtx;$/;"	t	typeref:struct:_n_TSMonitorSPEigCtx
TSOps	include/petsc-private/tsimpl.h	/^typedef struct _TSOps *TSOps;$/;"	t	typeref:struct:_TSOps
TSPSEUDO	include/finclude/petsctsdef.h	25;"	d
TSPSEUDO	include/petscts.h	30;"	d
TSPYTHON	include/finclude/petsctsdef.h	29;"	d
TSPYTHON	include/petscts.h	34;"	d
TSProblemType	include/finclude/petsctsdef.h	19;"	d
TSProblemType	include/petscts.h	/^typedef enum {TS_LINEAR,TS_NONLINEAR} TSProblemType;$/;"	t	typeref:enum:__anon66
TSRHSFunction	include/petscts.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*TSRHSFunction)(TS,PetscReal,Vec,Vec,void*);$/;"	t
TSRHSJacobian	include/petscts.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*TSRHSJacobian)(TS,PetscReal,Vec,Mat*,Mat*,MatStructure*,void*);$/;"	t
TSRK	include/finclude/petsctsdef.h	28;"	d
TSRK	include/petscts.h	33;"	d
TSROSW	include/finclude/petsctsdef.h	35;"	d
TSROSW	include/petscts.h	40;"	d
TSROSW2M	include/finclude/petsctsdef.h	69;"	d
TSROSW2M	include/petscts.h	539;"	d
TSROSW2P	include/finclude/petsctsdef.h	70;"	d
TSROSW2P	include/petscts.h	540;"	d
TSROSW4L	include/finclude/petsctsdef.h	84;"	d
TSROSW4L	include/petscts.h	554;"	d
TSROSWARK3	include/finclude/petsctsdef.h	78;"	d
TSROSWARK3	include/petscts.h	548;"	d
TSROSWASSP3P3S1C	include/finclude/petsctsdef.h	75;"	d
TSROSWASSP3P3S1C	include/petscts.h	545;"	d
TSROSWGRK4T	include/finclude/petsctsdef.h	81;"	d
TSROSWGRK4T	include/petscts.h	551;"	d
TSROSWLASSP3P4S2C	include/finclude/petsctsdef.h	76;"	d
TSROSWLASSP3P4S2C	include/petscts.h	546;"	d
TSROSWLLSSP3P3S2C	include/finclude/petsctsdef.h	77;"	d
TSROSWLLSSP3P4S2C	include/petscts.h	547;"	d
TSROSWRA34PW2	include/finclude/petsctsdef.h	72;"	d
TSROSWRA34PW2	include/petscts.h	542;"	d
TSROSWRA3PW	include/finclude/petsctsdef.h	71;"	d
TSROSWRA3PW	include/petscts.h	541;"	d
TSROSWRODAS3	include/finclude/petsctsdef.h	73;"	d
TSROSWRODAS3	include/petscts.h	543;"	d
TSROSWSANDU3	include/finclude/petsctsdef.h	74;"	d
TSROSWSANDU3	include/petscts.h	544;"	d
TSROSWSHAMP4	include/finclude/petsctsdef.h	82;"	d
TSROSWSHAMP4	include/petscts.h	552;"	d
TSROSWTHETA1	include/finclude/petsctsdef.h	79;"	d
TSROSWTHETA1	include/petscts.h	549;"	d
TSROSWTHETA2	include/finclude/petsctsdef.h	80;"	d
TSROSWTHETA2	include/petscts.h	550;"	d
TSROSWType	include/finclude/petsctsdef.h	68;"	d
TSROSWVELDD4	include/finclude/petsctsdef.h	83;"	d
TSROSWVELDD4	include/petscts.h	553;"	d
TSRegisterAllCalled	include/petscts.h	/^PETSC_EXTERN PetscBool         TSRegisterAllCalled;$/;"	v
TSRosWType	include/petscts.h	/^typedef const char* TSRosWType;$/;"	t
TSSSP	include/finclude/petsctsdef.h	33;"	d
TSSSP	include/petscts.h	38;"	d
TSSSPRK104	include/finclude/petsctsdef.h	41;"	d
TSSSPRK104	include/petscts.h	370;"	d
TSSSPRKS2	include/finclude/petsctsdef.h	39;"	d
TSSSPRKS2	include/petscts.h	368;"	d
TSSSPRKS3	include/finclude/petsctsdef.h	40;"	d
TSSSPRKS3	include/petscts.h	369;"	d
TSSSPType	include/finclude/petsctsdef.h	38;"	d
TSSSPType	include/petscts.h	/^typedef const char* TSSSPType;$/;"	t
TSSUNDIALS	include/finclude/petsctsdef.h	27;"	d
TSSUNDIALS	include/petscts.h	32;"	d
TSSolutionFunction	include/petscts.h	/^PETSC_EXTERN_TYPEDEF typedef PetscErrorCode (*TSSolutionFunction)(TS,PetscReal,Vec,void*);$/;"	t
TSStepStatus	include/petsc-private/tsimpl.h	/^} TSStepStatus;$/;"	t	typeref:enum:__anon9
TSSundialsGramSchmidtType	include/finclude/petsctsdef.h	20;"	d
TSSundialsGramSchmidtType	include/petscts.h	/^typedef enum { SUNDIALS_MODIFIED_GS = 1,SUNDIALS_CLASSICAL_GS = 2 } TSSundialsGramSchmidtType;$/;"	t	typeref:enum:__anon72
TSSundialsGramSchmidtTypes	include/petscts.h	/^PETSC_EXTERN const char *const TSSundialsGramSchmidtTypes[];$/;"	v
TSSundialsLmmType	include/finclude/petsctsdef.h	21;"	d
TSSundialsLmmType	include/petscts.h	/^typedef enum { SUNDIALS_ADAMS=1,SUNDIALS_BDF=2} TSSundialsLmmType;$/;"	t	typeref:enum:__anon71
TSSundialsLmmTypes	include/petscts.h	/^PETSC_EXTERN const char *const TSSundialsLmmTypes[];$/;"	v
TSSundialsType	include/finclude/petsctsdef.h	18;"	d
TSTHETA	include/finclude/petsctsdef.h	30;"	d
TSTHETA	include/petscts.h	35;"	d
TSType	include/finclude/petsctsdef.h	13;"	d
TSType	include/petscts.h	/^typedef const char* TSType;$/;"	t
TS_CLASSID	include/petscts.h	/^PETSC_EXTERN PetscClassId TS_CLASSID;$/;"	v
TS_CONVERGED_ITERATING	include/petscts.h	/^  TS_CONVERGED_ITERATING      = 0,$/;"	e	enum:__anon68
TS_CONVERGED_ITS	include/petscts.h	/^  TS_CONVERGED_ITS            = 2,$/;"	e	enum:__anon68
TS_CONVERGED_TIME	include/petscts.h	/^  TS_CONVERGED_TIME           = 1,$/;"	e	enum:__anon68
TS_CONVERGED_USER	include/petscts.h	/^  TS_CONVERGED_USER           = 3,$/;"	e	enum:__anon68
TS_DIVERGED_NONLINEAR_SOLVE	include/petscts.h	/^  TS_DIVERGED_NONLINEAR_SOLVE = -1,$/;"	e	enum:__anon68
TS_DIVERGED_STEP_REJECTED	include/petscts.h	/^  TS_DIVERGED_STEP_REJECTED   = -2$/;"	e	enum:__anon68
TS_EQ_DAE_IMPLICIT_INDEX1	include/petscts.h	/^  TS_EQ_DAE_IMPLICIT_INDEX1       = 1100,$/;"	e	enum:__anon67
TS_EQ_DAE_IMPLICIT_INDEX2	include/petscts.h	/^  TS_EQ_DAE_IMPLICIT_INDEX2       = 1200,$/;"	e	enum:__anon67
TS_EQ_DAE_IMPLICIT_INDEX3	include/petscts.h	/^  TS_EQ_DAE_IMPLICIT_INDEX3       = 1300,$/;"	e	enum:__anon67
TS_EQ_DAE_IMPLICIT_INDEXHI	include/petscts.h	/^  TS_EQ_DAE_IMPLICIT_INDEXHI      = 1500$/;"	e	enum:__anon67
TS_EQ_DAE_SEMI_EXPLICIT_INDEX1	include/petscts.h	/^  TS_EQ_DAE_SEMI_EXPLICIT_INDEX1  = 100,$/;"	e	enum:__anon67
TS_EQ_DAE_SEMI_EXPLICIT_INDEX2	include/petscts.h	/^  TS_EQ_DAE_SEMI_EXPLICIT_INDEX2  = 200,$/;"	e	enum:__anon67
TS_EQ_DAE_SEMI_EXPLICIT_INDEX3	include/petscts.h	/^  TS_EQ_DAE_SEMI_EXPLICIT_INDEX3  = 300,$/;"	e	enum:__anon67
TS_EQ_DAE_SEMI_EXPLICIT_INDEXHI	include/petscts.h	/^  TS_EQ_DAE_SEMI_EXPLICIT_INDEXHI = 500,$/;"	e	enum:__anon67
TS_EQ_EXPLICIT	include/petscts.h	/^  TS_EQ_EXPLICIT                  = 0,$/;"	e	enum:__anon67
TS_EQ_IMPLICIT	include/petscts.h	/^  TS_EQ_IMPLICIT                  = 1000,$/;"	e	enum:__anon67
TS_EQ_ODE_EXPLICIT	include/petscts.h	/^  TS_EQ_ODE_EXPLICIT              = 1,$/;"	e	enum:__anon67
TS_EQ_ODE_IMPLICIT	include/petscts.h	/^  TS_EQ_ODE_IMPLICIT              = 1001,$/;"	e	enum:__anon67
TS_EQ_UNSPECIFIED	include/petscts.h	/^  TS_EQ_UNSPECIFIED               = -1,$/;"	e	enum:__anon67
TS_EXACTFINALTIME_INTERPOLATE	include/petscts.h	/^typedef enum {TS_EXACTFINALTIME_STEPOVER=0,TS_EXACTFINALTIME_INTERPOLATE=1,TS_EXACTFINALTIME_MATCHSTEP=2} TSExactFinalTimeOption;$/;"	e	enum:__anon69
TS_EXACTFINALTIME_MATCHSTEP	include/petscts.h	/^typedef enum {TS_EXACTFINALTIME_STEPOVER=0,TS_EXACTFINALTIME_INTERPOLATE=1,TS_EXACTFINALTIME_MATCHSTEP=2} TSExactFinalTimeOption;$/;"	e	enum:__anon69
TS_EXACTFINALTIME_STEPOVER	include/petscts.h	/^typedef enum {TS_EXACTFINALTIME_STEPOVER=0,TS_EXACTFINALTIME_INTERPOLATE=1,TS_EXACTFINALTIME_MATCHSTEP=2} TSExactFinalTimeOption;$/;"	e	enum:__anon69
TS_FILE_CLASSID	include/petscts.h	341;"	d
TS_FunctionEval	include/petsc-private/tsimpl.h	/^PETSC_EXTERN PetscLogEvent TS_Step, TS_PseudoComputeTimeStep, TS_FunctionEval, TS_JacobianEval;$/;"	v
TS_JacobianEval	include/petsc-private/tsimpl.h	/^PETSC_EXTERN PetscLogEvent TS_Step, TS_PseudoComputeTimeStep, TS_FunctionEval, TS_JacobianEval;$/;"	v
TS_LINEAR	include/petscts.h	/^typedef enum {TS_LINEAR,TS_NONLINEAR} TSProblemType;$/;"	e	enum:__anon66
TS_NONLINEAR	include/petscts.h	/^typedef enum {TS_LINEAR,TS_NONLINEAR} TSProblemType;$/;"	e	enum:__anon66
TS_PseudoComputeTimeStep	include/petsc-private/tsimpl.h	/^PETSC_EXTERN PetscLogEvent TS_Step, TS_PseudoComputeTimeStep, TS_FunctionEval, TS_JacobianEval;$/;"	v
TS_STEP_COMPLETE	include/petsc-private/tsimpl.h	/^              TS_STEP_COMPLETE    \/* step accepted and ptime, steps, etc have been advanced *\/$/;"	e	enum:__anon9
TS_STEP_INCOMPLETE	include/petsc-private/tsimpl.h	/^typedef enum {TS_STEP_INCOMPLETE, \/* vec_sol, ptime, etc point to beginning of step *\/$/;"	e	enum:__anon9
TS_STEP_PENDING	include/petsc-private/tsimpl.h	/^              TS_STEP_PENDING,    \/* vec_sol advanced, but step has not been accepted yet *\/$/;"	e	enum:__anon9
TS_Step	include/petsc-private/tsimpl.h	/^PETSC_EXTERN PetscLogEvent TS_Step, TS_PseudoComputeTimeStep, TS_FunctionEval, TS_JacobianEval;$/;"	v
Tag	config/BuildSystem/build/bk.py	/^class Tag (build.transform.Transform):$/;"	c
Template	config/BuildSystem/build/templates/Compile.py	/^class Template(base.Base):$/;"	c
Template	config/BuildSystem/build/templates/SIDL.py	/^class Template(base.Base):$/;"	c
Test	src/dm/impls/mesh/examples/tests/meshTest.hh	/^  namespace Test {$/;"	n	namespace:ALE
Test	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^  namespace Test {$/;"	n	namespace:ALE
Test	src/dm/impls/mesh/examples/tests/sectionTest.hh	/^  namespace Test {$/;"	n	namespace:ALE
Test	src/dm/impls/mesh/examples/tests/sieveTest.hh	/^  namespace Test {$/;"	n	namespace:ALE
Test	src/dm/impls/mesh/examples/tests/unitTests.hh	/^  namespace Test {$/;"	n	namespace:ALE
Test	src/dm/impls/mesh/examples/tests/xsieveTest.hh	/^  namespace Test {$/;"	n	namespace:ALE
TestHexahedron	src/dm/impls/plex/examples/tests/ex8.c	/^PetscErrorCode TestHexahedron(MPI_Comm comm, PetscBool interpolate, PetscBool transform)$/;"	f
TestInterpolatedConversion	src/dm/impls/mesh/examples/tests/conversion1.cxx	/^PetscErrorCode TestInterpolatedConversion() {$/;"	f
TestLookup	src/dm/impls/plex/examples/tests/ex6.c	/^PetscErrorCode TestLookup(DMLabel label, AppCtx *user)$/;"	f
TestPetscBinaryIO	bin/pythonscripts/PetscBinaryIO_tests.py	/^class TestPetscBinaryIO(unittest.TestCase):$/;"	c
TestQuadrilateral	src/dm/impls/plex/examples/tests/ex8.c	/^PetscErrorCode TestQuadrilateral(MPI_Comm comm, PetscBool interpolate, PetscBool transform)$/;"	f
TestSetup	src/dm/impls/plex/examples/tests/ex6.c	/^PetscErrorCode TestSetup(DMLabel label, AppCtx *user)$/;"	f
TestTetrahedron	src/dm/impls/plex/examples/tests/ex8.c	/^PetscErrorCode TestTetrahedron(MPI_Comm comm, PetscBool interpolate, PetscBool transform)$/;"	f
TestTriangle	src/dm/impls/plex/examples/tests/ex8.c	/^PetscErrorCode TestTriangle(MPI_Comm comm, PetscBool interpolate, PetscBool transform)$/;"	f
TetGen	include/sieve/Generator.hh	/^  namespace TetGen {$/;"	n	namespace:ALE
TextArea	include/web/AMSOptions.py	/^from pyjamas.ui.TextArea import TextArea$/;"	i
TextArea	include/web/AMSSnoopObjects.py	/^from pyjamas.ui.TextArea import TextArea$/;"	i
TextArea	include/web/AMSSnoopStack.py	/^from pyjamas.ui.TextArea import TextArea$/;"	i
TextBox	include/web/AMSSnoopObjects.py	/^from pyjamas.ui.TextBox import TextBox$/;"	i
TextBox	include/web/AMSSnoopStack.py	/^from pyjamas.ui.TextBox import TextBox$/;"	i
This	config/BuildSystem/RDict.py	/^  import build.buildGraph # This is necessary for us to create BuildGraph objects on load$/;"	i
This	config/BuildSystem/RDict.py	/^  import project          # This is necessary for us to create Project objects on load$/;"	i
ThreadComm_Barrier	include/petsc-private/threadcommimpl.h	/^PETSC_EXTERN PetscLogEvent ThreadComm_RunKernel, ThreadComm_Barrier;$/;"	v
ThreadComm_RunKernel	include/petsc-private/threadcommimpl.h	/^PETSC_EXTERN PetscLogEvent ThreadComm_RunKernel, ThreadComm_Barrier;$/;"	v
Topology	include/sieve/Topology.hh	/^    Topology(MPI_Comm comm, const int debug = 0) : ParallelObject(comm, debug), _maxHeight(-1), _maxDepth(-1), _calculatedOverlap(false) {$/;"	f	class:ALE::Topology
Topology	include/sieve/Topology.hh	/^  class Topology : public ALE::ParallelObject {$/;"	c	namespace:ALE
TopologyBuilder	src/dm/impls/mesh/examples/tests/sieveTest.hh	/^    class TopologyBuilder {$/;"	c	namespace:ALE::Test
Transform	config/BuildSystem/build/transform.py	/^class Transform(base.Base):$/;"	c
TransitiveClosureVisitor	include/sieve/ISieve.hh	/^      TransitiveClosureVisitor(const Sieve& s, Visitor& v) : sieve(s), visitor(v), isCone(true) {};$/;"	f	class:ALE::ISieveVisitor::TransitiveClosureVisitor
TransitiveClosureVisitor	include/sieve/ISieve.hh	/^    class TransitiveClosureVisitor {$/;"	c	namespace:ALE::ISieveVisitor
TraverseCells	src/dm/impls/mesh/examples/tests/closure1.cxx	/^PetscErrorCode TraverseCells(DM dm, Options *options)$/;"	f
Tree	include/web/AMSOptions.py	/^from pyjamas.ui.Tree import Tree$/;"	i
Tree	include/web/AMSSnoopObjects.py	/^from pyjamas.ui.Tree import Tree$/;"	i
Tree	include/web/AMSSnoopStack.py	/^from pyjamas.ui.Tree import Tree$/;"	i
TreeFileSet	config/BuildSystem/build/fileset.py	/^class TreeFileSet (FileSet):$/;"	c
TreeItem	include/web/AMSOptions.py	/^from pyjamas.ui.TreeItem import TreeItem$/;"	i
TreeItem	include/web/AMSSnoopObjects.py	/^from pyjamas.ui.TreeItem import TreeItem$/;"	i
TreeItem	include/web/AMSSnoopStack.py	/^from pyjamas.ui.TreeItem import TreeItem$/;"	i
Triangle	include/sieve/Generator.hh	/^  namespace Triangle {$/;"	n	namespace:ALE
TriangleFiniOutput	src/dm/impls/mesh/mesh.c	/^PetscErrorCode TriangleFiniOutput(struct triangulateio *outputCtx)$/;"	f
TriangleInitInput	src/dm/impls/mesh/mesh.c	/^PetscErrorCode TriangleInitInput(struct triangulateio *inputCtx)$/;"	f
TriangleInitOutput	src/dm/impls/mesh/mesh.c	/^PetscErrorCode TriangleInitOutput(struct triangulateio *outputCtx)$/;"	f
TriangleToMesh	src/dm/impls/mesh/examples/tutorials/Coarsener.h	/^PetscErrorCode TriangleToMesh(Obj<ALE::Mesh> mesh, triangulateio * src, ALE::Mesh::real_section_type::patch_type patch)$/;"	f	namespace:ALE::Coarsener
TriangleToMesh	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^PetscErrorCode HierarchyBuilder::TriangleToMesh(triangulateio * src, patch_type patch)$/;"	f	class:ALE::Hierarchy::HierarchyBuilder
TriangleToMesh	src/dm/impls/mesh/examples/tutorials/ex_coarsen.h	/^PetscErrorCode TriangleToMesh(Obj<ALE::Mesh> mesh, triangulateio * src, ALE::Mesh::section_type::patch_type patch)$/;"	f
TrianglesOverlap	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^bool HierarchyBuilder::TrianglesOverlap(patch_type patchA, point_type TriA, patch_type patchB, point_type TriB)$/;"	f	class:ALE::Hierarchy::HierarchyBuilder
TwoValueSequence	include/sieve/Sieve.hh	/^       TwoValueSequence(const TwoValueSequence& seq) : _index(seq._index), _valueA(seq._valueA), _valueB(seq._valueB), _useTwoValues(seq._useTwoValues) {};$/;"	f	class:ALE::SieveDef::RecContainerTraits::TwoValueSequence
TwoValueSequence	include/sieve/Sieve.hh	/^       TwoValueSequence(typename traits::index_type& index, const value_type& valueA) : _index(index), _valueA(valueA), _valueB(value_type()), _useTwoValues(false) {};$/;"	f	class:ALE::SieveDef::RecContainerTraits::TwoValueSequence
TwoValueSequence	include/sieve/Sieve.hh	/^       TwoValueSequence(typename traits::index_type& index, const value_type& valueA, const value_type& valueB) : _index(index), _valueA(valueA), _valueB(valueB), _useTwoValues(true) {};$/;"	f	class:ALE::SieveDef::RecContainerTraits::TwoValueSequence
TwoValueSequence	include/sieve/Sieve.hh	/^     class TwoValueSequence {$/;"	c	struct:ALE::SieveDef::RecContainerTraits
Type	config/PETSc/FEM.py	/^    from Cxx import Type$/;"	i
UFCBoundaryCondition	include/sieve/UFCProblem.hh	/^      UFCBoundaryCondition(MPI_Comm comm, int debug = 0) : GeneralBoundaryCondition(comm, debug) {$/;"	f	class:ALE::Problem::UFCBoundaryCondition
UFCBoundaryCondition	include/sieve/UFCProblem.hh	/^      UFCBoundaryCondition(MPI_Comm comm, ufc::function * function, ufc::function * exactsol, ufc::finite_element * element, ufc::cell * cell, const std::string& name, const int marker, int debug = 0) : GeneralBoundaryCondition(comm, debug){$/;"	f	class:ALE::Problem::UFCBoundaryCondition
UFCBoundaryCondition	include/sieve/UFCProblem.hh	/^    class UFCBoundaryCondition : public GeneralBoundaryCondition {$/;"	c	namespace:ALE::Problem
UFCCellIntegral	include/sieve/UFCProblem.hh	/^      UFCCellIntegral(MPI_Comm comm, int debug = 1) : GeneralIntegral(comm, debug) {$/;"	f	class:ALE::Problem::UFCCellIntegral
UFCCellIntegral	include/sieve/UFCProblem.hh	/^      UFCCellIntegral(MPI_Comm comm, ufc::cell_integral * integral, ufc::cell * cell, name_type name, int label, int rank, int dimension, int ncoefficients = 0, int debug = 0) : GeneralIntegral(comm, name, label, ncoefficients, debug){$/;"	f	class:ALE::Problem::UFCCellIntegral
UFCCellIntegral	include/sieve/UFCProblem.hh	/^    class UFCCellIntegral : public GeneralIntegral {$/;"	c	namespace:ALE::Problem
UFCDiscretization	include/sieve/UFCProblem.hh	/^      UFCDiscretization(MPI_Comm comm, int debug = 1) : GeneralDiscretization(comm, debug) {$/;"	f	class:ALE::Problem::UFCDiscretization
UFCDiscretization	include/sieve/UFCProblem.hh	/^      UFCDiscretization(MPI_Comm comm, ufc::finite_element * element, ufc::cell * cell, int debug = 1) : GeneralDiscretization(comm, debug){$/;"	f	class:ALE::Problem::UFCDiscretization
UFCDiscretization	include/sieve/UFCProblem.hh	/^    class UFCDiscretization : public GeneralDiscretization {$/;"	c	namespace:ALE::Problem
UFCFormSubProblem	include/sieve/UFCProblem.hh	/^      UFCFormSubProblem(MPI_Comm comm, int debug = 0) : GenericFormSubProblem(comm, debug) {$/;"	f	class:ALE::Problem::UFCFormSubProblem
UFCFormSubProblem	include/sieve/UFCProblem.hh	/^      UFCFormSubProblem(MPI_Comm comm, ufc::cell * cell, ufc::finite_element * finite_element, int debug = 0) : GenericFormSubProblem(comm, debug) {$/;"	f	class:ALE::Problem::UFCFormSubProblem
UFCFormSubProblem	include/sieve/UFCProblem.hh	/^      UFCFormSubProblem(MPI_Comm comm, ufc::form * b_form, ufc::form * l_form, int debug = 0) : GenericFormSubProblem(comm, debug){$/;"	f	class:ALE::Problem::UFCFormSubProblem
UFCFormSubProblem	include/sieve/UFCProblem.hh	/^    class UFCFormSubProblem : public GenericFormSubProblem {$/;"	c	namespace:ALE::Problem
UFCHook	include/sieve/UFCProblem.hh	/^      UFCHook(ufc::form * bform, ufc::form * lform) {$/;"	f	class:ALE::Problem::UFCHook
UFCHook	include/sieve/UFCProblem.hh	/^    class UFCHook { \/\/initialize all the data from the UFC forms so we don't need to keep redoing it$/;"	c	namespace:ALE::Problem
USE_NEW_OVERLAP	include/sieve/Mesh.hh	1211;"	d
USE_SUBPROCESS	config/BuildSystem/script.py	/^  USE_SUBPROCESS = 0$/;"	v
USE_SUBPROCESS	config/BuildSystem/script.py	/^  USE_SUBPROCESS = 1$/;"	v
USE_SUBPROCESS	config/BuildSystem/script.py	/^USE_SUBPROCESS = 0$/;"	v
UniformSection	include/sieve/Field.hh	/^    UniformSection(MPI_Comm comm, const int debug = 0) : ParallelObject(comm, debug), _contiguous_array_size(0), _contiguous_array(NULL) {$/;"	f	class:ALE::UniformSection
UniformSection	include/sieve/Field.hh	/^    UniformSection(const Obj<atlas_type>& atlas) : ParallelObject(atlas->comm(), atlas->debug()), _contiguous_array_size(0), _contiguous_array(NULL), _atlas(atlas) {$/;"	f	class:ALE::UniformSection
UniformSection	include/sieve/Field.hh	/^  class UniformSection : public ALE::ParallelObject {$/;"	c	namespace:ALE
UniformSectionTest	src/dm/impls/mesh/examples/tests/section1-old.cxx	/^PetscErrorCode UniformSectionTest(const Obj<topology_type>& topology, Options *options)$/;"	f
Update	config/BuildSystem/build/fileState.py	/^class Update (build.transform.Transform):$/;"	c
UpdateAddVisitor	include/sieve/ISieve.hh	/^      UpdateAddVisitor(Section& s, const value_type *v) : section(s), values(v), i(0) {};$/;"	f	class:ALE::ISieveVisitor::UpdateAddVisitor
UpdateAddVisitor	include/sieve/ISieve.hh	/^    class UpdateAddVisitor {$/;"	c	namespace:ALE::ISieveVisitor
UpdateAllVisitor	include/sieve/ISieve.hh	/^      UpdateAllVisitor(Section& s, const value_type *v) : section(s), values(v), i(0) {};$/;"	f	class:ALE::ISieveVisitor::UpdateAllVisitor
UpdateAllVisitor	include/sieve/ISieve.hh	/^    class UpdateAllVisitor {$/;"	c	namespace:ALE::ISieveVisitor
UpdateVecVisitor	include/sieve/ISieve.hh	/^      UpdateVecVisitor(const Vec v, const PetscSection s, const value_type *values, InsertMode mode) : v(v), section(s), values(values), mode(mode), nF(0), i(0) {};$/;"	f	class:ALE::ISieveVisitor::UpdateVecVisitor
UpdateVecVisitor	include/sieve/ISieve.hh	/^      UpdateVecVisitor(const Vec v, const PetscSection s, const value_type *values, InsertMode mode, PetscInt numFields, PetscInt fieldSize[]) : v(v), section(s), values(values), mode(mode), nF(numFields), i(0) {$/;"	f	class:ALE::ISieveVisitor::UpdateVecVisitor
UpdateVecVisitor	include/sieve/ISieve.hh	/^    class UpdateVecVisitor {$/;"	c	namespace:ALE::ISieveVisitor
UpdateVisitor	include/sieve/ISieve.hh	/^      UpdateVisitor(Section& s, const value_type *v) : section(s), values(v), i(0) {};$/;"	f	class:ALE::ISieveVisitor::UpdateVisitor
UpdateVisitor	include/sieve/ISieve.hh	/^    class UpdateVisitor {$/;"	c	namespace:ALE::ISieveVisitor
UserDict	config/BuildSystem/RDict.py	/^    import UserDict$/;"	i
UsingC	config/BuildSystem/build/templates/usingC.py	/^class UsingC (base.Base):$/;"	c
UsingCxx	config/BuildSystem/build/templates/usingCxx.py	/^class UsingCxx (base.Base):$/;"	c
UsingPython	config/BuildSystem/build/templates/usingPython.py	/^class UsingPython (base.Base):$/;"	c
UsingSIDL	config/BuildSystem/build/templates/usingSIDL.py	/^class UsingSIDL (base.Base):$/;"	c
VECCUSP	include/finclude/petscvecdef.h	27;"	d
VECCUSP	include/petscvec.h	103;"	d
VECESI	include/finclude/petscvecdef.h	29;"	d
VECHEADER	include/petsc-private/vecimpl.h	156;"	d
VECMPI	include/finclude/petscvecdef.h	23;"	d
VECMPI	include/petscvec.h	97;"	d
VECMPICUSP	include/finclude/petscvecdef.h	26;"	d
VECMPICUSP	include/petscvec.h	102;"	d
VECMPIPTHREAD	include/petscvec.h	106;"	d
VECNEST	include/petscvec.h	104;"	d
VECOP_DUPLICATE	include/petscvec.h	/^typedef enum { VECOP_VIEW = 33, VECOP_LOAD = 41, VECOP_DUPLICATE = 0} VecOperation;$/;"	e	enum:__anon40
VECOP_LOAD	include/petscvec.h	/^typedef enum { VECOP_VIEW = 33, VECOP_LOAD = 41, VECOP_DUPLICATE = 0} VecOperation;$/;"	e	enum:__anon40
VECOP_VIEW	include/petscvec.h	/^typedef enum { VECOP_VIEW = 33, VECOP_LOAD = 41, VECOP_DUPLICATE = 0} VecOperation;$/;"	e	enum:__anon40
VECPETSCESI	include/finclude/petscvecdef.h	30;"	d
VECPTHREAD	include/petscvec.h	107;"	d
VECSEQ	include/finclude/petscvecdef.h	22;"	d
VECSEQ	include/petscvec.h	96;"	d
VECSEQCUSP	include/finclude/petscvecdef.h	25;"	d
VECSEQCUSP	include/petscvec.h	101;"	d
VECSEQPTHREAD	include/petscvec.h	105;"	d
VECSHARED	include/finclude/petscvecdef.h	28;"	d
VECSHARED	include/petscvec.h	99;"	d
VECSIEVE	include/petscvec.h	100;"	d
VECSTANDARD	include/finclude/petscvecdef.h	24;"	d
VECSTANDARD	include/petscvec.h	98;"	d
VEC_AXPBYPCZ	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_Swap, VEC_AssemblyBegin, VEC_NormBarrier, VEC_DotNormBarrier, VEC_DotNorm, VEC_AXPBYPCZ, VEC_Ops;$/;"	v
VEC_AXPY	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_Norm, VEC_Normalize, VEC_Scale, VEC_Copy, VEC_Set, VEC_AXPY, VEC_AYPX, VEC_WAXPY, VEC_MAXPY;$/;"	v
VEC_AYPX	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_Norm, VEC_Normalize, VEC_Scale, VEC_Copy, VEC_Set, VEC_AXPY, VEC_AYPX, VEC_WAXPY, VEC_MAXPY;$/;"	v
VEC_AssemblyBegin	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_Swap, VEC_AssemblyBegin, VEC_NormBarrier, VEC_DotNormBarrier, VEC_DotNorm, VEC_AXPBYPCZ, VEC_Ops;$/;"	v
VEC_AssemblyEnd	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_AssemblyEnd, VEC_PointwiseMult, VEC_SetValues, VEC_Load, VEC_ScatterBarrier, VEC_ScatterBegin, VEC_ScatterEnd;$/;"	v
VEC_CLASSID	include/petscvec.h	/^PETSC_EXTERN PetscClassId VEC_CLASSID;$/;"	v
VEC_CUSPCopyFromGPU	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_CUSPCopyToGPU, VEC_CUSPCopyFromGPU;$/;"	v
VEC_CUSPCopyFromGPUSome	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_CUSPCopyToGPUSome, VEC_CUSPCopyFromGPUSome;$/;"	v
VEC_CUSPCopyToGPU	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_CUSPCopyToGPU, VEC_CUSPCopyFromGPU;$/;"	v
VEC_CUSPCopyToGPUSome	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_CUSPCopyToGPUSome, VEC_CUSPCopyFromGPUSome;$/;"	v
VEC_Copy	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_Norm, VEC_Normalize, VEC_Scale, VEC_Copy, VEC_Set, VEC_AXPY, VEC_AYPX, VEC_WAXPY, VEC_MAXPY;$/;"	v
VEC_Dot	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_View, VEC_Max, VEC_Min, VEC_DotBarrier, VEC_Dot, VEC_MDotBarrier, VEC_MDot, VEC_TDot, VEC_MTDot;$/;"	v
VEC_DotBarrier	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_View, VEC_Max, VEC_Min, VEC_DotBarrier, VEC_Dot, VEC_MDotBarrier, VEC_MDot, VEC_TDot, VEC_MTDot;$/;"	v
VEC_DotNorm	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_Swap, VEC_AssemblyBegin, VEC_NormBarrier, VEC_DotNormBarrier, VEC_DotNorm, VEC_AXPBYPCZ, VEC_Ops;$/;"	v
VEC_DotNormBarrier	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_Swap, VEC_AssemblyBegin, VEC_NormBarrier, VEC_DotNormBarrier, VEC_DotNorm, VEC_AXPBYPCZ, VEC_Ops;$/;"	v
VEC_FILE_CLASSID	include/petscvec.h	111;"	d
VEC_IGNORE_NEGATIVE_INDICES	include/petscvec.h	/^typedef enum {VEC_IGNORE_OFF_PROC_ENTRIES,VEC_IGNORE_NEGATIVE_INDICES} VecOption;$/;"	e	enum:__anon39
VEC_IGNORE_OFF_PROC_ENTRIES	include/petscvec.h	/^typedef enum {VEC_IGNORE_OFF_PROC_ENTRIES,VEC_IGNORE_NEGATIVE_INDICES} VecOption;$/;"	e	enum:__anon39
VEC_Load	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_AssemblyEnd, VEC_PointwiseMult, VEC_SetValues, VEC_Load, VEC_ScatterBarrier, VEC_ScatterBegin, VEC_ScatterEnd;$/;"	v
VEC_MAXPY	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_Norm, VEC_Normalize, VEC_Scale, VEC_Copy, VEC_Set, VEC_AXPY, VEC_AYPX, VEC_WAXPY, VEC_MAXPY;$/;"	v
VEC_MDot	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_View, VEC_Max, VEC_Min, VEC_DotBarrier, VEC_Dot, VEC_MDotBarrier, VEC_MDot, VEC_TDot, VEC_MTDot;$/;"	v
VEC_MDotBarrier	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_View, VEC_Max, VEC_Min, VEC_DotBarrier, VEC_Dot, VEC_MDotBarrier, VEC_MDot, VEC_TDot, VEC_MTDot;$/;"	v
VEC_MTDot	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_View, VEC_Max, VEC_Min, VEC_DotBarrier, VEC_Dot, VEC_MDotBarrier, VEC_MDot, VEC_TDot, VEC_MTDot;$/;"	v
VEC_Max	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_View, VEC_Max, VEC_Min, VEC_DotBarrier, VEC_Dot, VEC_MDotBarrier, VEC_MDot, VEC_TDot, VEC_MTDot;$/;"	v
VEC_Min	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_View, VEC_Max, VEC_Min, VEC_DotBarrier, VEC_Dot, VEC_MDotBarrier, VEC_MDot, VEC_TDot, VEC_MTDot;$/;"	v
VEC_Norm	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_Norm, VEC_Normalize, VEC_Scale, VEC_Copy, VEC_Set, VEC_AXPY, VEC_AYPX, VEC_WAXPY, VEC_MAXPY;$/;"	v
VEC_NormBarrier	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_Swap, VEC_AssemblyBegin, VEC_NormBarrier, VEC_DotNormBarrier, VEC_DotNorm, VEC_AXPBYPCZ, VEC_Ops;$/;"	v
VEC_Normalize	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_Norm, VEC_Normalize, VEC_Scale, VEC_Copy, VEC_Set, VEC_AXPY, VEC_AYPX, VEC_WAXPY, VEC_MAXPY;$/;"	v
VEC_Ops	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_Swap, VEC_AssemblyBegin, VEC_NormBarrier, VEC_DotNormBarrier, VEC_DotNorm, VEC_AXPBYPCZ, VEC_Ops;$/;"	v
VEC_PointwiseMult	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_AssemblyEnd, VEC_PointwiseMult, VEC_SetValues, VEC_Load, VEC_ScatterBarrier, VEC_ScatterBegin, VEC_ScatterEnd;$/;"	v
VEC_ReduceArithmetic	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_SetRandom, VEC_ReduceArithmetic, VEC_ReduceBarrier, VEC_ReduceCommunication;$/;"	v
VEC_ReduceBarrier	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_SetRandom, VEC_ReduceArithmetic, VEC_ReduceBarrier, VEC_ReduceCommunication;$/;"	v
VEC_ReduceBegin	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_ReduceBegin,VEC_ReduceEnd;$/;"	v
VEC_ReduceCommunication	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_SetRandom, VEC_ReduceArithmetic, VEC_ReduceBarrier, VEC_ReduceCommunication;$/;"	v
VEC_ReduceEnd	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_ReduceBegin,VEC_ReduceEnd;$/;"	v
VEC_SCATTER_CLASSID	include/petscvec.h	/^PETSC_EXTERN PetscClassId VEC_SCATTER_CLASSID;$/;"	v
VEC_SCATTER_MPI_GENERAL	include/petsc-private/vecimpl.h	/^               VEC_SCATTER_MPI_GENERAL,VEC_SCATTER_MPI_TOALL,$/;"	e	enum:__anon25
VEC_SCATTER_MPI_TOALL	include/petsc-private/vecimpl.h	/^               VEC_SCATTER_MPI_GENERAL,VEC_SCATTER_MPI_TOALL,$/;"	e	enum:__anon25
VEC_SCATTER_MPI_TOONE	include/petsc-private/vecimpl.h	/^               VEC_SCATTER_MPI_TOONE} VecScatterType;$/;"	e	enum:__anon25
VEC_SCATTER_SEQ_GENERAL	include/petsc-private/vecimpl.h	/^typedef enum { VEC_SCATTER_SEQ_GENERAL,VEC_SCATTER_SEQ_STRIDE,$/;"	e	enum:__anon25
VEC_SCATTER_SEQ_STRIDE	include/petsc-private/vecimpl.h	/^typedef enum { VEC_SCATTER_SEQ_GENERAL,VEC_SCATTER_SEQ_STRIDE,$/;"	e	enum:__anon25
VEC_Scale	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_Norm, VEC_Normalize, VEC_Scale, VEC_Copy, VEC_Set, VEC_AXPY, VEC_AYPX, VEC_WAXPY, VEC_MAXPY;$/;"	v
VEC_ScatterBarrier	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_AssemblyEnd, VEC_PointwiseMult, VEC_SetValues, VEC_Load, VEC_ScatterBarrier, VEC_ScatterBegin, VEC_ScatterEnd;$/;"	v
VEC_ScatterBegin	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_AssemblyEnd, VEC_PointwiseMult, VEC_SetValues, VEC_Load, VEC_ScatterBarrier, VEC_ScatterBegin, VEC_ScatterEnd;$/;"	v
VEC_ScatterEnd	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_AssemblyEnd, VEC_PointwiseMult, VEC_SetValues, VEC_Load, VEC_ScatterBarrier, VEC_ScatterBegin, VEC_ScatterEnd;$/;"	v
VEC_Set	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_Norm, VEC_Normalize, VEC_Scale, VEC_Copy, VEC_Set, VEC_AXPY, VEC_AYPX, VEC_WAXPY, VEC_MAXPY;$/;"	v
VEC_SetRandom	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_SetRandom, VEC_ReduceArithmetic, VEC_ReduceBarrier, VEC_ReduceCommunication;$/;"	v
VEC_SetValues	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_AssemblyEnd, VEC_PointwiseMult, VEC_SetValues, VEC_Load, VEC_ScatterBarrier, VEC_ScatterBegin, VEC_ScatterEnd;$/;"	v
VEC_Swap	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_Swap, VEC_AssemblyBegin, VEC_NormBarrier, VEC_DotNormBarrier, VEC_DotNorm, VEC_AXPBYPCZ, VEC_Ops;$/;"	v
VEC_TDot	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_View, VEC_Max, VEC_Min, VEC_DotBarrier, VEC_Dot, VEC_MDotBarrier, VEC_MDot, VEC_TDot, VEC_MTDot;$/;"	v
VEC_View	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_View, VEC_Max, VEC_Min, VEC_DotBarrier, VEC_Dot, VEC_MDotBarrier, VEC_MDot, VEC_TDot, VEC_MTDot;$/;"	v
VEC_WAXPY	include/petsc-private/vecimpl.h	/^PETSC_EXTERN PetscLogEvent VEC_Norm, VEC_Normalize, VEC_Scale, VEC_Copy, VEC_Set, VEC_AXPY, VEC_AYPX, VEC_WAXPY, VEC_MAXPY;$/;"	v
VERBOSE	config/cmakegen.py	/^    VERBOSE = True$/;"	v
VERBOSE	config/cmakegen.py	/^VERBOSE = False$/;"	v
VTKViewer	include/petscdmmesh_viewers.hh	/^  VTKViewer() {};$/;"	f	class:VTKViewer
VTKViewer	include/petscdmmesh_viewers.hh	/^class VTKViewer {$/;"	c
VTKXMLViewer	include/petscdmmesh_viewers.hh	/^  VTKXMLViewer() {};$/;"	f	class:VTKXMLViewer
VTKXMLViewer	include/petscdmmesh_viewers.hh	/^class VTKXMLViewer {$/;"	c
ValueSequence	include/sieve/Sieve.hh	/^       ValueSequence(const ValueSequence& seq) : _index(seq._index), _value(seq._value) {};$/;"	f	class:ALE::SieveDef::RecContainerTraits::ValueSequence
ValueSequence	include/sieve/Sieve.hh	/^       ValueSequence(typename traits::index_type& index, const value_type& value) : _index(index), _value(value) {};$/;"	f	class:ALE::SieveDef::RecContainerTraits::ValueSequence
ValueSequence	include/sieve/Sieve.hh	/^     class ValueSequence {$/;"	c	struct:ALE::SieveDef::RecContainerTraits
Vec	bin/matlab/classes/matlabheader.h	/^typedef PetscPointer Vec;$/;"	t
Vec	bin/pythonscripts/PetscBinaryIO.py	/^class Vec(np.ndarray):$/;"	c
Vec	include/finclude/petscvecdef.h	11;"	d
Vec	include/petscvec.h	/^typedef struct _p_Vec*         Vec;$/;"	t	typeref:struct:_p_Vec
VecList	include/petscvec.h	/^PETSC_EXTERN PetscFunctionList VecList;$/;"	v
VecLoadExodusCell	src/dm/impls/mesh/meshexodus.c	/^PetscErrorCode VecLoadExodusCell(DM dm,Vec v,MPI_Comm comm,PetscInt exoid,PetscInt step,PetscInt exofield)$/;"	f
VecLoadExodusCellSet	src/dm/impls/mesh/meshexodus.c	/^PetscErrorCode VecLoadExodusCellSet(DM dm,Vec v,PetscInt csID,MPI_Comm comm,PetscInt exoid,PetscInt step,PetscInt exofield)$/;"	f
VecLoadExodusVertex	src/dm/impls/mesh/meshexodus.c	/^PetscErrorCode VecLoadExodusVertex(DM dm,Vec v,MPI_Comm comm,PetscInt exoid,PetscInt step,PetscInt exofield)$/;"	f
VecLoadExodusVertexSet	src/dm/impls/mesh/meshexodus.c	/^PetscErrorCode VecLoadExodusVertexSet(DM dm,Vec v,PetscInt vsID,MPI_Comm comm,PetscInt exoid,PetscInt step,PetscInt exofield)$/;"	f
VecOperation	include/finclude/petscvecdef.h	20;"	d
VecOperation	include/petscvec.h	/^typedef enum { VECOP_VIEW = 33, VECOP_LOAD = 41, VECOP_DUPLICATE = 0} VecOperation;$/;"	t	typeref:enum:__anon40
VecOps	include/petsc-private/vecimpl.h	/^typedef struct _VecOps *VecOps;$/;"	t	typeref:struct:_VecOps
VecOption	include/finclude/petscvecdef.h	18;"	d
VecOption	include/petscvec.h	/^typedef enum {VEC_IGNORE_OFF_PROC_ENTRIES,VEC_IGNORE_NEGATIVE_INDICES} VecOption;$/;"	t	typeref:enum:__anon39
VecRegisterAllCalled	include/petscvec.h	/^PETSC_EXTERN PetscBool         VecRegisterAllCalled;$/;"	v
VecScatter	include/finclude/petscvecdef.h	12;"	d
VecScatter	include/petscvec.h	/^typedef struct _p_VecScatter*  VecScatter;$/;"	t	typeref:struct:_p_VecScatter
VecScatterType	include/petsc-private/vecimpl.h	/^               VEC_SCATTER_MPI_TOONE} VecScatterType;$/;"	t	typeref:enum:__anon25
VecScatter_MPI_General	include/petsc-private/vecimpl.h	/^} VecScatter_MPI_General;$/;"	t	typeref:struct:__anon29
VecScatter_MPI_ToAll	include/petsc-private/vecimpl.h	/^} VecScatter_MPI_ToAll;$/;"	t	typeref:struct:__anon28
VecScatter_Seq_General	include/petsc-private/vecimpl.h	/^} VecScatter_Seq_General;$/;"	t	typeref:struct:__anon26
VecScatter_Seq_Stride	include/petsc-private/vecimpl.h	/^} VecScatter_Seq_Stride;$/;"	t	typeref:struct:__anon27
VecSetValue	include/petscvec.h	/^PETSC_STATIC_INLINE PetscErrorCode VecSetValue(Vec v,PetscInt i,PetscScalar va,InsertMode mode) {return VecSetValues(v,1,&i,&va,mode);}$/;"	f
VecSetValueLocal	include/petscvec.h	/^PETSC_STATIC_INLINE PetscErrorCode VecSetValueLocal(Vec v,PetscInt i,PetscScalar va,InsertMode mode) {return VecSetValuesLocal(v,1,&i,&va,mode);}$/;"	f
VecStash	include/petsc-private/vecimpl.h	/^} VecStash;$/;"	t	typeref:struct:__anon24
VecStashValue_Private	include/petsc-private/vecimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode VecStashValue_Private(VecStash *stash,PetscInt row,PetscScalar value)$/;"	f
VecStashValuesBlocked_Private	include/petsc-private/vecimpl.h	/^PETSC_STATIC_INLINE PetscErrorCode VecStashValuesBlocked_Private(VecStash *stash,PetscInt row,PetscScalar *values)$/;"	f
VecType	include/finclude/petscvecdef.h	19;"	d
VecType	include/petscvec.h	/^typedef const char* VecType;$/;"	t
VecViewExodusCell	src/dm/impls/mesh/meshexodus.c	/^PetscErrorCode VecViewExodusCell(DM dm,Vec v,MPI_Comm comm,PetscInt exoid,PetscInt step,PetscInt exofield)$/;"	f
VecViewExodusCellSet	src/dm/impls/mesh/meshexodus.c	/^PetscErrorCode VecViewExodusCellSet(DM dm,Vec v,PetscInt csID,MPI_Comm comm,PetscInt exoid,PetscInt step,PetscInt exofield)$/;"	f
VecViewExodusVertex	src/dm/impls/mesh/meshexodus.c	/^PetscErrorCode VecViewExodusVertex(DM dm,Vec v,MPI_Comm comm,PetscInt exoid,PetscInt step,PetscInt exofield)$/;"	f
VecViewExodusVertexSet	src/dm/impls/mesh/meshexodus.c	/^PetscErrorCode VecViewExodusVertexSet(DM dm,Vec v,PetscInt vsID,MPI_Comm comm,PetscInt exoid,PetscInt step,PetscInt exofield)$/;"	f
Vec_MOAB	src/dm/impls/moab/dmmoab.cxx	/^} Vec_MOAB;$/;"	t	typeref:struct:__anon2	file:
Vecs	include/petscvec.h	/^typedef struct _n_Vecs* Vecs;$/;"	t	typeref:struct:_n_Vecs
Version	bin/petscnagupgrade.py	/^from distutils.version import LooseVersion as Version$/;"	i
VersionControl	config/BuildSystem/sourceControl.py	/^class VersionControl(logger.Logger):$/;"	c
VerticalPanel	include/web/AMSOptions.py	/^from pyjamas.ui.VerticalPanel import VerticalPanel$/;"	i
VerticalPanel	include/web/AMSSnoopObjects.py	/^from pyjamas.ui.VerticalPanel import VerticalPanel$/;"	i
VerticalPanel	include/web/AMSSnoopStack.py	/^from pyjamas.ui.VerticalPanel import VerticalPanel$/;"	i
View	bin/matlab/classes/PetscViewer.m.html	/^    function View(obj,viewer)$/;"	f
View	include/petsc-private/sfimpl.h	/^  PetscErrorCode (*View)(PetscSF,PetscViewer);$/;"	m	struct:_PetscSFOps
ViewMesh	src/dm/impls/mesh/examples/tests/mesh2.cxx	/^PetscErrorCode ViewMesh(const Obj<ALE::Mesh>& m, const char filename[])$/;"	f
ViewMesh	src/dm/impls/mesh/examples/tests/operator1.cxx	/^PetscErrorCode ViewMesh(const Obj<ALE::Mesh>& m, const char filename[])$/;"	f
Viewer	include/petscdmmesh_formats.hh	/^      Viewer() {};$/;"	f	class:ALE::PCICE::Viewer
Viewer	include/petscdmmesh_formats.hh	/^      Viewer() {};$/;"	f	class:ALE::PFLOTRAN::Viewer
Viewer	include/petscdmmesh_formats.hh	/^      Viewer() {};$/;"	f	class:ALE::PyLith::Viewer
Viewer	include/petscdmmesh_formats.hh	/^    class Viewer {$/;"	c	namespace:ALE::PCICE
Viewer	include/petscdmmesh_formats.hh	/^    class Viewer {$/;"	c	namespace:ALE::PFLOTRAN
Viewer	include/petscdmmesh_formats.hh	/^    class Viewer {$/;"	c	namespace:ALE::PyLith
WindowedArrowContainer	src/dm/impls/mesh/examples/tests/ex07.cxx	/^typedef ALE::X::SifterDef::ArrowContainer<ALE::X::UnicolorArrowSet> WindowedArrowContainer;$/;"	t	file:
WindowsError	config/install.py	/^  WindowsError = None$/;"	v
WritePCICEElements	src/dm/impls/mesh/meshpcice.c	/^PetscErrorCode WritePCICEElements(DM dm, PetscViewer viewer)$/;"	f
WritePCICERestart	src/dm/impls/mesh/meshpcice.c	/^PetscErrorCode WritePCICERestart(DM dm, PetscViewer viewer)$/;"	f
WritePCICEVertices	src/dm/impls/mesh/meshpcice.c	/^PetscErrorCode WritePCICEVertices(DM dm, PetscViewer viewer)$/;"	f
WriteVTKElements	src/dm/impls/mesh/mesh.c	/^PetscErrorCode WriteVTKElements(DM dm, PetscViewer viewer)$/;"	f
WriteVTKHeader	src/dm/impls/mesh/mesh.c	/^PetscErrorCode WriteVTKHeader(DM dm, PetscViewer viewer)$/;"	f
WriteVTKVertices	src/dm/impls/mesh/mesh.c	/^PetscErrorCode WriteVTKVertices(DM dm, PetscViewer viewer)$/;"	f
X	include/petsc-private/dmimpl.h	/^  Vec X;$/;"	m	struct:_DMNamedVecLink
X	include/petsc-private/tsimpl.h	/^    Vec X;                      \/* Solution vector at which the Jacobian was last evaluated *\/$/;"	m	struct:_p_TS::__anon6
X	include/petsc-private/tsimpl.h	/^    Vec X;                      \/* Solution vector at which the Jacobian was last evaluated *\/$/;"	m	struct:_p_TS::__anon7
XException	include/sieve/ALE_exception.hh	/^    XException(){};$/;"	f	class:ALE::XException
XException	include/sieve/ALE_exception.hh	/^    XException(const XException& e) {this->_txt << e._txt.str();};$/;"	f	class:ALE::XException
XException	include/sieve/ALE_exception.hh	/^    XException(const ostrstr& txt)  {this->_txt << txt.str();};$/;"	f	class:ALE::XException
XException	include/sieve/ALE_exception.hh	/^    XException(const string& msg)   {this->_txt << msg;};$/;"	f	class:ALE::XException
XException	include/sieve/ALE_exception.hh	/^  class XException {$/;"	c	namespace:ALE
XG_RANGE	include/finclude/petscdmdadef.h	41;"	d
XMLMesh	include/petscdmmesh_formats.hh	/^      XMLMesh(const Obj<PETSC_MESH_TYPE>& mesh) : XMLObject(), mesh(mesh), state(OUTSIDE), coords(NULL), embedDim(0), numCells(0) {};$/;"	f	class:ALE::Dolfin::XMLMesh
XMLMesh	include/petscdmmesh_formats.hh	/^    class XMLMesh : public XMLObject {$/;"	c	namespace:ALE::Dolfin
XMLObject	include/petscdmmesh_formats.hh	/^      XMLObject() {};$/;"	f	class:ALE::Dolfin::XMLObject
XMLObject	include/petscdmmesh_formats.hh	/^    class XMLObject {$/;"	c	namespace:ALE::Dolfin
XSieveTester	src/dm/impls/mesh/examples/tests/xsieveTest.hh	/^      XSieveTester() : argDB("XSieve basic test options"){$/;"	f	struct:ALE::Test::XSieveTester
XSieveTester	src/dm/impls/mesh/examples/tests/xsieveTest.hh	/^    struct XSieveTester {$/;"	s	namespace:ALE::Test
X_RANGE	include/finclude/petscdmdadef.h	44;"	d
Xdot	include/petsc-private/tsimpl.h	/^    Vec Xdot;                   \/* Time derivative of the state vector at which the Jacobian was last evaluated *\/$/;"	m	struct:_p_TS::__anon7
Xdotstate	include/petsc-private/tsimpl.h	/^    PetscInt Xdotstate;         \/* State of the solution vector *\/$/;"	m	struct:_p_TS::__anon7
Xe	include/petsc-private/dmdaimpl.h	/^  PetscInt              Xs,Xe,Ys,Ye,Zs,Ze;     \/* range including ghost values$/;"	m	struct:__anon23
Xs	include/petsc-private/dmdaimpl.h	/^  PetscInt              Xs,Xe,Ys,Ye,Zs,Ze;     \/* range including ghost values$/;"	m	struct:__anon23
Xstate	include/petsc-private/tsimpl.h	/^    PetscInt Xstate;            \/* State of the solution vector *\/$/;"	m	struct:_p_TS::__anon6
Xstate	include/petsc-private/tsimpl.h	/^    PetscInt Xstate;            \/* State of the solution vector *\/$/;"	m	struct:_p_TS::__anon7
YG_RANGE	include/finclude/petscdmdadef.h	42;"	d
Y_RANGE	include/finclude/petscdmdadef.h	45;"	d
Ye	include/petsc-private/dmdaimpl.h	/^  PetscInt              Xs,Xe,Ys,Ye,Zs,Ze;     \/* range including ghost values$/;"	m	struct:__anon23
Ys	include/petsc-private/dmdaimpl.h	/^  PetscInt              Xs,Xe,Ys,Ye,Zs,Ze;     \/* range including ghost values$/;"	m	struct:__anon23
ZG_RANGE	include/finclude/petscdmdadef.h	43;"	d
Z_RANGE	include/finclude/petscdmdadef.h	46;"	d
Ze	include/petsc-private/dmdaimpl.h	/^  PetscInt              Xs,Xe,Ys,Ye,Zs,Ze;     \/* range including ghost values$/;"	m	struct:__anon23
Zoltan	include/sieve/Partitioner.hh	/^    namespace Zoltan {$/;"	n	namespace:ALE::New
Zs	include/petsc-private/dmdaimpl.h	/^  PetscInt              Xs,Xe,Ys,Ye,Zs,Ze;     \/* range including ghost values$/;"	m	struct:__anon23
_ADDAIdx_s	include/petscdmadda.h	/^struct _ADDAIdx_s {$/;"	s
_Action	include/petsc-private/logimpl.h	/^typedef struct _Action {$/;"	s
_BLASLAPACK_CAPS_H	include/petscblaslapack_caps.h	5;"	d
_BLASLAPACK_C_H	include/petscblaslapack_c.h	6;"	d
_BLASLAPACK_H	include/petscblaslapack.h	10;"	d
_BLASLAPACK_QD_H	include/petscblaslapack_qd.h	5;"	d
_BLASLAPACK_STDCALL_H	include/petscblaslapack_stdcall.h	10;"	d
_BLASLAPACK_USCORE_H	include/petscblaslapack_uscore.h	5;"	d
_BLOCKTRANSPOSE_H	include/petsc-private/kernels/blocktranspose.h	2;"	d
_BSD_SOURCE	include/petscsys.h	26;"	d
_CharacteristicOps	include/petsc-private/characteristicimpl.h	/^struct _CharacteristicOps {$/;"	s
_DAIMPL_H	include/petsc-private/dmdaimpl.h	6;"	d
_DMCoarsenHookLink	include/petsc-private/dmimpl.h	/^struct _DMCoarsenHookLink {$/;"	s
_DMGlobalToLocalHookLink	include/petsc-private/dmimpl.h	/^struct _DMGlobalToLocalHookLink {$/;"	s
_DMIMPL_H	include/petsc-private/dmimpl.h	4;"	d
_DMInterpolationInfo	include/petscdm.h	/^struct _DMInterpolationInfo {$/;"	s
_DMKSPOps	include/petsc-private/kspimpl.h	/^struct _DMKSPOps {$/;"	s
_DMMeshInterpolationInfo	include/petscdmmesh.h	/^struct _DMMeshInterpolationInfo {$/;"	s
_DMNamedVecLink	include/petsc-private/dmimpl.h	/^struct _DMNamedVecLink {$/;"	s
_DMOps	include/petsc-private/dmimpl.h	/^struct _DMOps {$/;"	s
_DMRefineHookLink	include/petsc-private/dmimpl.h	/^struct _DMRefineHookLink {$/;"	s
_DMSNESOps	include/petsc-private/snesimpl.h	/^struct _DMSNESOps {$/;"	s
_DMSubDomainHookLink	include/petsc-private/dmimpl.h	/^struct _DMSubDomainHookLink {$/;"	s
_DMTSOps	include/petsc-private/tsimpl.h	/^struct _DMTSOps {$/;"	s
_DMWorkLink	include/petsc-private/dmimpl.h	/^struct _DMWorkLink {$/;"	s
_DRAWIMPL_H	include/petsc-private/drawimpl.h	6;"	d
_FORTRANIMPL_H	include/petsc-private/fortranimpl.h	4;"	d
_GNU_SOURCE	include/petscerror.h	424;"	d
_GNU_SOURCE	include/petscsys.h	29;"	d
_ISOps	include/petsc-private/isimpl.h	/^struct _ISOps {$/;"	s
_IS_H	include/petsc-private/isimpl.h	8;"	d
_KSPIMPL_H	include/petsc-private/kspimpl.h	3;"	d
_KSPOps	include/petsc-private/kspimpl.h	/^struct _KSPOps {$/;"	s
_LineSearchOps	include/petsc-private/linesearchimpl.h	/^struct _LineSearchOps {$/;"	s
_MESHIMPL_H	include/petsc-private/meshimpl.h	2;"	d
_MatCoarsenOps	include/petsc-private/matimpl.h	/^struct _MatCoarsenOps {$/;"	s
_MatOps	include/petsc-private/matimpl.h	/^struct _MatOps {$/;"	s
_MatPartitioningOps	include/petsc-private/matimpl.h	/^struct _MatPartitioningOps {$/;"	s
_MatStashSpace	include/petsc-private/matimpl.h	/^struct _MatStashSpace {$/;"	s
_Object	include/petsc-private/logimpl.h	/^typedef struct _Object {$/;"	s
_PATCHIMPL_H	include/petsc-private/dmpatchimpl.h	2;"	d
_PCIMPL_H	include/petsc-private/pcimpl.h	3;"	d
_PCOps	include/petsc-private/pcimpl.h	/^struct _PCOps {$/;"	s
_PETSCDMDATYPES_H	include/petscdmdatypes.h	2;"	d
_PETSCDMTYPES_H	include/petscdmtypes.h	2;"	d
_PETSCDRAWTYPES_H	include/petscdrawtypes.h	2;"	d
_PETSCHEAD_H	include/petsc-private/petscimpl.h	7;"	d
_PETSCSFIMPL_H	include/petsc-private/sfimpl.h	2;"	d
_PETSCSFTYPES_H	include/petscsftypes.h	2;"	d
_PETSCVIEWERTYPES_H	include/petscviewertypes.h	6;"	d
_PLEXIMPL_H	include/petsc-private/dmpleximpl.h	2;"	d
_POSIX_C_SOURCE	include/petscsys.h	23;"	d
_PetscCDArrNd	include/petscmat.h	/^typedef struct _PetscCDArrNd{$/;"	s
_PetscCDIntNd	include/petscmat.h	/^typedef struct _PetscCDIntNd{$/;"	s
_PetscCoarsenData	include/petscmat.h	/^typedef struct _PetscCoarsenData{$/;"	s
_PetscDrawOps	include/petsc-private/drawimpl.h	/^struct _PetscDrawOps {$/;"	s
_PetscSFOps	include/petsc-private/sfimpl.h	/^struct _PetscSFOps {$/;"	s
_PetscStageInfo	include/petsclog.h	/^typedef struct _PetscStageInfo {$/;"	s
_PetscThreadCommOps	include/petsc-private/threadcommimpl.h	/^struct _PetscThreadCommOps {$/;"	s
_PetscViewerOps	include/petsc-private/viewerimpl.h	/^struct _PetscViewerOps {$/;"	s
_SNESOps	include/petsc-private/snesimpl.h	/^struct _SNESOps {$/;"	s
_SectionIntOps	include/petsc-private/meshimpl.h	/^struct _SectionIntOps {$/;"	s
_SectionRealOps	include/petsc-private/meshimpl.h	/^struct _SectionRealOps {$/;"	s
_TSAdaptOps	include/petsc-private/tsimpl.h	/^struct _TSAdaptOps {$/;"	s
_TSOps	include/petsc-private/tsimpl.h	/^struct _TSOps {$/;"	s
_TemporarilyImmutableSet	config/BuildSystem/config/setsBackport.py	/^class _TemporarilyImmutableSet(BaseSet):$/;"	c
_TemporarilyImmutableSet	config/BuildSystem/config/setsOrdered.py	/^class _TemporarilyImmutableSet(BaseSet):$/;"	c
_VIEWERIMPL	include/petsc-private/viewerimpl.h	3;"	d
_VecOps	include/petsc-private/vecimpl.h	/^struct _VecOps {$/;"	s
__BAGIMPL	include/petsc-private/bagimpl.h	2;"	d
__CHARACTERISTICIMPL_H	include/petsc-private/characteristicimpl.h	3;"	d
__FEMProblem	include/sieve/FEMProblem.hh	2;"	d
__FUNCT__	include/petsc-private/kspimpl.h	134;"	d
__FUNCT__	include/petsc-private/kspimpl.h	135;"	d
__FUNCT__	include/petsc-private/kspimpl.h	188;"	d
__FUNCT__	include/petsc-private/kspimpl.h	189;"	d
__FUNCT__	include/petsc-private/kspimpl.h	198;"	d
__FUNCT__	include/petsc-private/kspimpl.h	199;"	d
__FUNCT__	include/petsc-private/kspimpl.h	209;"	d
__FUNCT__	include/petsc-private/kspimpl.h	210;"	d
__FUNCT__	include/petsc-private/kspimpl.h	220;"	d
__FUNCT__	include/petsc-private/kspimpl.h	221;"	d
__FUNCT__	include/petsc-private/kspimpl.h	235;"	d
__FUNCT__	include/petsc-private/kspimpl.h	236;"	d
__FUNCT__	include/petsc-private/kspimpl.h	250;"	d
__FUNCT__	include/petsc-private/kspimpl.h	251;"	d
__FUNCT__	include/petsc-private/kspimpl.h	265;"	d
__FUNCT__	include/petsc-private/kspimpl.h	266;"	d
__FUNCT__	include/petsc-private/matimpl.h	1132;"	d
__FUNCT__	include/petsc-private/matimpl.h	1133;"	d
__FUNCT__	include/petsc-private/matimpl.h	1185;"	d
__FUNCT__	include/petsc-private/matimpl.h	1186;"	d
__FUNCT__	include/petsc-private/matimpl.h	1227;"	d
__FUNCT__	include/petsc-private/matimpl.h	1228;"	d
__FUNCT__	include/petsc-private/matimpl.h	1248;"	d
__FUNCT__	include/petsc-private/matimpl.h	1249;"	d
__FUNCT__	include/petsc-private/matimpl.h	1263;"	d
__FUNCT__	include/petsc-private/matimpl.h	1264;"	d
__FUNCT__	include/petsc-private/matimpl.h	1279;"	d
__FUNCT__	include/petsc-private/matimpl.h	1280;"	d
__FUNCT__	include/petsc-private/matimpl.h	1302;"	d
__FUNCT__	include/petsc-private/matimpl.h	1303;"	d
__FUNCT__	include/petsc-private/matimpl.h	1331;"	d
__FUNCT__	include/petsc-private/matimpl.h	1332;"	d
__FUNCT__	include/petsc-private/matimpl.h	1347;"	d
__FUNCT__	include/petsc-private/matimpl.h	1348;"	d
__FUNCT__	include/petsc-private/matimpl.h	1375;"	d
__FUNCT__	include/petsc-private/matimpl.h	1376;"	d
__FUNCT__	include/petsc-private/matimpl.h	512;"	d
__FUNCT__	include/petsc-private/matimpl.h	513;"	d
__FUNCT__	include/petsc-private/matimpl.h	532;"	d
__FUNCT__	include/petsc-private/matimpl.h	533;"	d
__FUNCT__	include/petsc-private/matimpl.h	557;"	d
__FUNCT__	include/petsc-private/matimpl.h	558;"	d
__FUNCT__	include/petsc-private/matimpl.h	573;"	d
__FUNCT__	include/petsc-private/matimpl.h	574;"	d
__FUNCT__	include/petsc-private/matimpl.h	594;"	d
__FUNCT__	include/petsc-private/matimpl.h	595;"	d
__FUNCT__	include/petsc-private/petscfptimpl.h	108;"	d
__FUNCT__	include/petsc-private/petscfptimpl.h	109;"	d
__FUNCT__	include/petsc-private/petscfptimpl.h	17;"	d
__FUNCT__	include/petsc-private/petscfptimpl.h	18;"	d
__FUNCT__	include/petsc-private/petscfptimpl.h	31;"	d
__FUNCT__	include/petsc-private/petscfptimpl.h	32;"	d
__FUNCT__	include/petsc-private/petscfptimpl.h	46;"	d
__FUNCT__	include/petsc-private/petscfptimpl.h	47;"	d
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__log_initialize	include/sieve/ALE_mem.hh	/^  void logged_allocator<T, O>::__log_initialize() {$/;"	f	class:ALE::logged_allocator
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__nCone	include/sieve/Sieve.hh	/^    void Sieve<Point_,Marker_,Color_>::__nCone(const Obj<pointSequence>& points, int n, const Color_& color, bool useColor, Obj<coneArray> cone, Obj<coneSet> seen) {$/;"	f	class:ALE::Sieve
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_classid	bin/pythonscripts/PetscBinaryIO.py	/^    _classid = {1211216:'Mat',$/;"	v	class:PetscBinaryIO
_closure2data	include/sieve/FEMProblem.hh	/^      const int * _closure2data; \/\/local index reordering$/;"	m	class:ALE::Problem::GeneralDiscretization
_closure2data	include/sieve/FEMProblem.hh	/^      int * _closure2data;                          \/\/a mapping from closure indices to data indices for the overall element$/;"	m	class:ALE::Problem::GenericFormSubProblem
_closure2data	include/sieve/FEMProblem.hh	/^      int * _closure2data;  \/\/if there is some API-level data storage, this maps the unknowns for the WHOLE CLOSURE onto the unknowns for the API$/;"	m	class:ALE::Problem::GeneralIntegral
_closure2data	include/sieve/UFCProblem.hh	/^      int * _closure2data;                    \/\/map of LOCAL DISCRETIZATION closure dof indices to data dof indices; used for evaluation$/;"	m	class:ALE::Problem::UFCBoundaryCondition
_code	include/sieve/CartesianSieve.hh	/^        int              *_code;$/;"	m	class:ALE::CartesianSieveDef::ConeSequence::iterator
_code	include/sieve/CartesianSieve.hh	/^        int              *_code;$/;"	m	class:ALE::CartesianSieveDef::SupportSequence::iterator
_coefficients	include/sieve/UFCProblem.hh	/^      const double ** _coefficients;$/;"	m	class:ALE::Problem::UFCCellIntegral
_color	include/sieve/Sifter.hh	/^      const typename traits::color_type& _color;$/;"	m	struct:ALE::Sifter::ColorSetter
_comm	include/sieve/ALE_containers.hh	/^    MPI_Comm    _comm;$/;"	m	class:ALE::ParallelObject
_comm	include/sieve/ALE_mem.hh	/^    MPI_Comm _comm;$/;"	m	class:ALE::MemoryLogger
_comm	include/sieve/LabelSifter.hh	/^    MPI_Comm    _comm;$/;"	m	class:ALE::LabelSifter
_comm	include/sieve/Sifter.hh	/^    MPI_Comm    _comm;$/;"	m	class:ALE::ASifter
_commRank	include/sieve/ALE_containers.hh	/^    int         _commRank;$/;"	m	class:ALE::ParallelObject
_commRank	include/sieve/LabelSifter.hh	/^    int         _commRank;$/;"	m	class:ALE::LabelSifter
_commRank	include/sieve/Sifter.hh	/^    int         _commRank;$/;"	m	class:ALE::ASifter
_commSize	include/sieve/ALE_containers.hh	/^    int         _commSize;$/;"	m	class:ALE::ParallelObject
_commSize	include/sieve/LabelSifter.hh	/^    int         _commSize;$/;"	m	class:ALE::LabelSifter
_commSize	include/sieve/Sifter.hh	/^    int         _commSize;$/;"	m	class:ALE::ASifter
_comps	include/sieve/Field.hh	/^    std::vector<int >             _comps;$/;"	m	class:ALE::GeneralSection
_compute_hash	config/BuildSystem/config/setsBackport.py	/^    def _compute_hash(self):$/;"	m	class:BaseSet
_compute_hash	config/BuildSystem/config/setsOrdered.py	/^    def _compute_hash(self):$/;"	m	class:BaseSet
_cone	include/sieve/Sections.hh	/^      value_type       *_cone;$/;"	m	class:ALE::New::ArrowSection
_cone	include/sieve/Sections.hh	/^      value_type     *_cone;$/;"	m	class:ALE::New::ConeSection
_coneSeq	include/sieve/LabelSifter.hh	/^    Obj<typename traits::coneSequence> _coneSeq;$/;"	m	class:ALE::LabelSifter
_coneSeq	include/sieve/Sifter.hh	/^    Obj<typename traits::coneSequence> _coneSeq;$/;"	m	class:ALE::ASifter
_coneSize	include/sieve/Sections.hh	/^      int               _coneSize;$/;"	m	class:ALE::New::ArrowSection
_coneSize	include/sieve/Sections.hh	/^      int             _coneSize;$/;"	m	class:ALE::New::ConeSection
_construct_event	include/sieve/ALE_mem.hh	/^    static int         _construct_event;$/;"	m	class:ALE::logged_allocator
_contiguous_array	include/sieve/Field.hh	/^    value_type     *_contiguous_array;$/;"	m	class:ALE::NewUniformSection
_contiguous_array	include/sieve/Field.hh	/^    value_type     *_contiguous_array;$/;"	m	class:ALE::UniformSection
_contiguous_array_size	include/sieve/Field.hh	/^    size_t          _contiguous_array_size;$/;"	m	class:ALE::NewUniformSection
_contiguous_array_size	include/sieve/Field.hh	/^    size_t          _contiguous_array_size;$/;"	m	class:ALE::UniformSection
_cookie	include/sieve/ALE_mem.hh	/^    static LogCookie   _cookie;$/;"	m	class:ALE::logged_allocator
_createSubtree	src/dm/impls/mesh/examples/tests/xsieveTest.hh	/^      static int _createSubtree(ALE::Obj<symmetric_xsieve_type> tree, int depth, int fanout, int& tail){$/;"	f	struct:ALE::Test::XSieveTester
_create_event	include/sieve/ALE_mem.hh	/^    static int         _create_event;$/;"	m	class:ALE::logged_allocator
_createdType	include/sieve/BasicCommunication.hh	/^    bool          _createdType;$/;"	m	class:ALE::MPIMover
_customRestrictAtlas	include/sieve/Field.hh	/^    std::vector<customAtlas_type> _customRestrictAtlas;$/;"	m	class:ALE::GeneralSection
_customUpdateAtlas	include/sieve/Field.hh	/^    std::vector<customAtlas_type> _customUpdateAtlas;$/;"	m	class:ALE::GeneralSection
_cygwinpath_methods	config/BuildSystem/client-python/cygwinpath.c	/^static PyMethodDef _cygwinpath_methods[] = {$/;"	v	file:
_data	include/sieve/ISieve.hh	/^        const point_type *_data;$/;"	m	class:ALE::IFSieveDef::Sequence::const_iterator
_data	include/sieve/ISieve.hh	/^      const point_type *_data;$/;"	m	class:ALE::IFSieveDef::Sequence
_datatype	include/sieve/BasicCommunication.hh	/^    MPI_Datatype  _datatype;$/;"	m	class:ALE::MPIMover
_datatype	include/sieve/Field.hh	/^    MPI_Datatype  _datatype;$/;"	m	class:ALE::Field
_deallocate_event	include/sieve/ALE_mem.hh	/^    static int         _deallocate_event;$/;"	m	class:ALE::logged_allocator
_debug	include/sieve/ALE_containers.hh	/^    int         _debug;$/;"	m	class:ALE::ParallelObject
_debug	include/sieve/ALE_mem.hh	/^    int      _debug;$/;"	m	class:ALE::MemoryLogger
_debug	include/sieve/Completion.hh	/^      int          _debug;$/;"	m	class:ALE::New::ParallelFactory
_debug	include/sieve/LabelSifter.hh	/^    int _debug;$/;"	m	class:ALE::LabelSifter
_debug	include/sieve/Sifter.hh	/^    int _debug;$/;"	m	class:ALE::ASifter
_debug	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^  int                 _debug; \/\/ The debugging level$/;"	m	class:FunctionTestDistribution	file:
_debug	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  int                 _debug; \/\/ The debugging level$/;"	m	class:FunctionTestIDistribution	file:
_debug	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  int                 _debug;        \/\/ The debugging level$/;"	m	class:FunctionTestIMesh	file:
_debug	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  int                 _debug; \/\/ The debugging level$/;"	m	class:MemoryTestIMesh	file:
_debug	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  int                 _debug; \/\/ The debugging level$/;"	m	class:StressTestIMesh	file:
_debug	src/dm/impls/mesh/examples/tests/isection1.cxx	/^  int                    _debug; \/\/ The debugging level$/;"	m	class:StressTestSection	file:
_debug	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  int                  _debug; \/\/ The debugging level$/;"	m	class:FunctionTestISieve	file:
_debug	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  int                  _debug; \/\/ The debugging level$/;"	m	class:MemoryTestISieve	file:
_debug	src/dm/impls/mesh/examples/tests/section1.cxx	/^  int                    _debug; \/\/ The debugging level$/;"	m	class:StressTestGeneralMeshSection	file:
_debug	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  int                   _debug; \/\/ The debugging level$/;"	m	class:FunctionTestHatSieve	file:
_debug	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  int                   _debug; \/\/ The debugging level$/;"	m	class:StressTestHatSieve	file:
_debug	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  int                  _debug; \/\/ The debugging level$/;"	m	class:StressTestGeneralSieve	file:
_del_event	include/sieve/ALE_mem.hh	/^    static int         _del_event;$/;"	m	class:ALE::logged_allocator
_descs	include/sieve/ALE_args.hh	/^    ALE::Obj< ::boost::program_options::options_description> _descs;$/;"	m	class:ALE::ArgDB
_destroy_event	include/sieve/ALE_mem.hh	/^    static int         _destroy_event;$/;"	m	class:ALE::logged_allocator
_detect_type	config/BuildSystem/patch.py	/^  def _detect_type(self, p):$/;"	m	class:PatchSet
_dim	include/sieve/CartesianSieve.hh	/^        int               _dim;$/;"	m	class:ALE::CartesianSieveDef::ConeSequence::iterator
_dim	include/sieve/CartesianSieve.hh	/^        int               _dim;$/;"	m	class:ALE::CartesianSieveDef::SupportSequence::iterator
_dim	include/sieve/CartesianSieve.hh	/^      int         _dim;$/;"	m	class:ALE::CartesianSieveDef::ConeSequence
_dim	include/sieve/CartesianSieve.hh	/^      int         _dim;$/;"	m	class:ALE::CartesianSieveDef::SupportSequence
_dim	include/sieve/CartesianSieve.hh	/^    int                    _dim;$/;"	m	class:ALE::CartesianMesh
_dim	include/sieve/CartesianSieve.hh	/^    int  _dim;$/;"	m	class:ALE::CartesianSieve
_dim	include/sieve/Mesh.hh	/^    int                  _dim;$/;"	m	class:ALE::Mesh
_dim	include/sieve/Mesh.hh	/^    int _dim;$/;"	m	class:ALE::IMesh
_dim	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  PetscInt            _dim;          \/\/ The mesh dimension$/;"	m	class:FunctionTestIMesh	file:
_dim2class	include/sieve/FEMProblem.hh	/^      std::map<int,int> _dim2class;$/;"	m	class:ALE::Problem::GeneralDiscretization
_dim2class	include/sieve/Mesh.hh	/^    std::map<int,int> _dim2class;$/;"	m	class:ALE::Discretization
_dim2dof	include/sieve/FEMProblem.hh	/^      std::map<int,int> _dim2dof; \/\/not good enough for tensor product assembly.... however we can generalize this into some sort of "getClosureItemDofs" or something per cell$/;"	m	class:ALE::Problem::GeneralDiscretization
_dim2dof	include/sieve/Mesh.hh	/^    std::map<int,int> _dim2dof;$/;"	m	class:ALE::Discretization
_discretization	include/sieve/CartesianSieve.hh	/^    Obj<Discretization>    _discretization;$/;"	m	class:ALE::CartesianMesh
_discretizations	include/sieve/FEMProblem.hh	/^      discretizations_type _discretizations;$/;"	m	class:ALE::Problem::GenericFormSubProblem
_discretizations	include/sieve/Mesh.hh	/^    discretizations_type   _discretizations;$/;"	m	class:ALE::IMesh
_discretizations	include/sieve/Mesh.hh	/^    discretizations_type _discretizations;$/;"	m	class:ALE::Mesh
_distRecvOverlap	include/sieve/CartesianSieve.hh	/^    Obj<recv_overlap_type> _distRecvOverlap;$/;"	m	class:ALE::CartesianBundle
_distRecvOverlap	include/sieve/Mesh.hh	/^    Obj<recv_overlap_type> _distRecvOverlap;$/;"	m	class:ALE::Bundle
_distRecvOverlap	include/sieve/Mesh.hh	/^    Obj<recv_overlap_type> _distRecvOverlap;$/;"	m	class:ALE::IBundle
_distRecvOverlap	include/sieve/Topology.hh	/^    Obj<recv_overlap_type> _distRecvOverlap;$/;"	m	class:ALE::Topology
_distSendOverlap	include/sieve/CartesianSieve.hh	/^    Obj<send_overlap_type> _distSendOverlap;$/;"	m	class:ALE::CartesianBundle
_distSendOverlap	include/sieve/Mesh.hh	/^    Obj<send_overlap_type> _distSendOverlap;$/;"	m	class:ALE::Bundle
_distSendOverlap	include/sieve/Mesh.hh	/^    Obj<send_overlap_type> _distSendOverlap;$/;"	m	class:ALE::IBundle
_distSendOverlap	include/sieve/Topology.hh	/^    Obj<send_overlap_type> _distSendOverlap;$/;"	m	class:ALE::Topology
_domain	include/sieve/Sections.hh	/^      chart_type      _domain;$/;"	m	class:ALE::New::ConeSection
_domain	include/sieve/Sections.hh	/^      chart_type      _domain;$/;"	m	class:ALE::New::SupportSection
_domain	include/sieve/Sections.hh	/^      chart_type  _domain;$/;"	m	class:ALE::New::PartitionSection
_dtor	include/sieve/ALE_args.hh	/^    ::boost::program_options::typed_value<T>* _dtor;$/;"	m	struct:ALE::Arg
_empty	include/sieve/Field.hh	/^    Obj<coneSequence> _empty;$/;"	m	class:ALE::DiscreteSieve
_emptyValue	include/sieve/Field.hh	/^    fiber_type      _emptyValue;$/;"	m	class:ALE::NewUniformSection
_emptyValue	include/sieve/Field.hh	/^    fiber_type      _emptyValue;$/;"	m	class:ALE::UniformSection
_emptyValue	include/sieve/IField.hh	/^    fiber_type      _emptyValue;$/;"	m	class:ALE::IUniformSection
_end	include/sieve/CartesianSieve.hh	/^      point_type _end;$/;"	m	class:ALE::CartesianSieveDef::PointSequence
_end	include/sieve/ISieve.hh	/^      int               _end;$/;"	m	class:ALE::IFSieveDef::Sequence
_ex	include/sieve/ALE_containers.hh	/^      extractor_type _ex;$/;"	m	class:ALE::IndexSequence::iterator
_ex	include/sieve/LabelSifter.hh	/^        extractor_type _ex;$/;"	m	class:ALE::NewSifterDef::IndexSequenceTraits::iterator_base
_ex	include/sieve/Sifter.hh	/^        extractor_type _ex;$/;"	m	class:ALE::SifterDef::IndexSequenceTraits::iterator_base
_exactSol	include/sieve/UFCProblem.hh	/^      ufc::function * _exactSol;     \/\/this will be evaluated in the case that there is an analytic solution to the associated problem.$/;"	m	class:ALE::Problem::UFCBoundaryCondition
_exactSolution	include/sieve/FEMProblem.hh	/^      Obj<GeneralBoundaryCondition> _exactSolution; \/\/evaluates a function over all unknowns on the form containing an exact solution.  Per discretization later.$/;"	m	class:ALE::Problem::GenericFormSubProblem
_exactSolution	include/sieve/FEMProblem.hh	/^      Obj<GeneralBoundaryCondition> _exactSolution;$/;"	m	class:ALE::Problem::GeneralDiscretization
_exactSolution	include/sieve/Mesh.hh	/^    Obj<BoundaryCondition> _exactSolution;$/;"	m	class:ALE::Discretization
_exclusionIndices	include/sieve/FEMProblem.hh	/^      std::map<int, const int *> _exclusionIndices;$/;"	m	class:ALE::Problem::GeneralDiscretization
_exclusionIndices	include/sieve/Mesh.hh	/^    std::map<int, const int *> _exclusionIndices;$/;"	m	class:ALE::Discretization
_factory	include/sieve/Mesh.hh	/^    Obj<MeshNumberingFactory> _factory;$/;"	m	class:ALE::Bundle
_factory	include/sieve/Mesh.hh	/^    Obj<MeshNumberingFactory> _factory;$/;"	m	class:ALE::IBundle
_finite_element	include/sieve/UFCProblem.hh	/^      ufc::finite_element * _finite_element;  \/\/this will typically be a subelement.$/;"	m	class:ALE::Problem::UFCDiscretization
_finite_element	include/sieve/UFCProblem.hh	/^      ufc::finite_element * _finite_element; \/\/we have to evaluate both the function and the exactsol at some point$/;"	m	class:ALE::Problem::UFCBoundaryCondition
_forcingSectionName	include/sieve/FEMProblem.hh	/^      name_type _forcingSectionName;$/;"	m	class:ALE::Problem::GenericFormSubProblem
_full_finite_element	include/sieve/UFCProblem.hh	/^      ufc::finite_element * _full_finite_element;  \/\/the big one with all unknowns (even mixed) described.  all integrals are assumed to be defined on it$/;"	m	class:ALE::Problem::UFCFormSubProblem
_func	include/sieve/Mesh.hh	/^    function_type   _func;$/;"	m	class:ALE::BoundaryCondition
_function	include/sieve/UFCProblem.hh	/^      ufc::function * _function;     \/\/this will be evaluated to set the conditions.$/;"	m	class:ALE::Problem::UFCBoundaryCondition
_getItems	config/BuildSystem/config/setsOrdered.py	/^    def _getItems(self):$/;"	m	class:BaseSet
_graph	include/sieve/LabelSifter.hh	/^        graph_type& _graph;$/;"	m	struct:ALE::LabelSifter::__anon7::coneSequence
_graph	include/sieve/LabelSifter.hh	/^        graph_type& _graph;$/;"	m	struct:ALE::LabelSifter::__anon7::supportSequence
_graph	include/sieve/Sifter.hh	/^        graph_type& _graph;$/;"	m	struct:ALE::ASifter::__anon2::coneSequence
_graph	include/sieve/Sifter.hh	/^        graph_type& _graph;$/;"	m	struct:ALE::ASifter::__anon2::supportSequence
_height	include/sieve/Sections.hh	/^      int         _height;$/;"	m	class:ALE::New::PartitionSection
_height	include/sieve/Sections.hh	/^      int        _height;$/;"	m	class:ALE::New::PartitionSizeSection
_holes	include/sieve/Mesh.hh	/^    holes_type             _holes;$/;"	m	class:ALE::IMesh
_holes	include/sieve/Mesh.hh	/^    holes_type           _holes;$/;"	m	class:ALE::Mesh
_index	include/sieve/ALE_containers.hh	/^    index_type& _index;$/;"	m	struct:ALE::IndexSequence
_index	include/sieve/LabelSifter.hh	/^        typename traits::index_type&                                    _index;$/;"	m	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
_index	include/sieve/Sieve.hh	/^        const typename traits::index_type& _index;$/;"	m	class:ALE::SieveDef::RecContainerTraits::PointSequence
_index	include/sieve/Sieve.hh	/^       const typename traits::index_type& _index;$/;"	m	class:ALE::SieveDef::RecContainerTraits::TwoValueSequence
_index	include/sieve/Sieve.hh	/^       const typename traits::index_type& _index;$/;"	m	class:ALE::SieveDef::RecContainerTraits::ValueSequence
_index	include/sieve/Sifter.hh	/^        const typename traits::index_type& _index;$/;"	m	class:ALE::SifterDef::RecContainerTraits::PointSequence
_index	include/sieve/Sifter.hh	/^        typename traits::index_type&                                    _index;$/;"	m	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
_indexArray	include/sieve/Mesh.hh	/^    Obj<oIndexArray>      _indexArray;$/;"	m	class:ALE::Bundle
_indexArray	include/sieve/Mesh.hh	/^    Obj<oIndexArray>      _indexArray;$/;"	m	class:ALE::IBundle
_indices	include/sieve/CartesianSieve.hh	/^        value_type *_indices;$/;"	m	class:ALE::CartesianSieveDef::ConeSequence::iterator
_indices	include/sieve/CartesianSieve.hh	/^        value_type *_indices;$/;"	m	class:ALE::CartesianSieveDef::SupportSequence::iterator
_indices	include/sieve/CartesianSieve.hh	/^      int        *_indices;$/;"	m	class:ALE::CartesianSieveDef::ConeSequence
_indices	include/sieve/CartesianSieve.hh	/^      int        *_indices;$/;"	m	class:ALE::CartesianSieveDef::SupportSequence
_indices	include/sieve/FEMProblem.hh	/^      const int *         _indices;$/;"	m	class:ALE::Problem::GeneralDiscretization
_indices	include/sieve/Mesh.hh	/^    const int    *_indices;$/;"	m	class:ALE::Discretization
_init	include/sieve/Field.hh	/^    void _init() {$/;"	f	class:ALE::DiscreteSieve
_init	include/sieve/Sections.hh	/^      void _init(const Obj<bundle_type>& bundle, const int numElements, const marker_type partition[]) {$/;"	f	class:ALE::New::PartitionSection
_init	include/sieve/Sections.hh	/^      void _init(const Obj<bundle_type>& bundle, const int numElements, const marker_type partition[]) {$/;"	f	class:ALE::New::PartitionSizeSection
_intSections	include/sieve/CartesianSieve.hh	/^    int_sections_type      _intSections;$/;"	m	class:ALE::CartesianBundle
_intSections	include/sieve/Mesh.hh	/^    int_sections_type     _intSections;$/;"	m	class:ALE::Bundle
_intSections	include/sieve/Mesh.hh	/^    int_sections_type     _intSections;$/;"	m	class:ALE::IBundle
_int_allocator	include/sieve/Topology.hh	/^    int_alloc_type         _int_allocator;$/;"	m	class:ALE::Topology
_integral	include/sieve/UFCProblem.hh	/^      ufc::cell_integral * _integral;$/;"	m	class:ALE::Problem::UFCCellIntegral
_integrals	include/sieve/FEMProblem.hh	/^      integral_type _integrals;$/;"	m	class:ALE::Problem::GenericFormSubProblem
_integrator	include/sieve/Mesh.hh	/^    integrator_type _integrator;$/;"	m	class:ALE::BoundaryCondition
_interpolate	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  PetscBool           _interpolate;  \/\/ Flag for mesh interpolation$/;"	m	class:FunctionTestIMesh	file:
_interpolate	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  PetscBool           _interpolate;  \/\/ Flag for mesh interpolation$/;"	m	class:StressTestIMesh	file:
_invOrder	include/sieve/INumbering.hh	/^    std::map<int, point_type> _invOrder;$/;"	m	class:ALE::INumbering
_invOrder	include/sieve/Numbering.hh	/^    std::map<int, point_type> _invOrder;$/;"	m	class:ALE::Numbering
_iter	include/sieve/Field.hh	/^      typename Map::const_iterator _iter;$/;"	m	class:ALE::SetFromMap::const_iterator
_iters	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^  PetscInt            _iters; \/\/ The number of test repetitions$/;"	m	class:FunctionTestDistribution	file:
_iters	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  PetscInt            _iters; \/\/ The number of test repetitions$/;"	m	class:FunctionTestIDistribution	file:
_iters	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  PetscInt            _iters;        \/\/ The number of test repetitions$/;"	m	class:FunctionTestIMesh	file:
_iters	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  PetscInt            _iters; \/\/ The number of test repetitions$/;"	m	class:MemoryTestIMesh	file:
_iters	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  PetscInt            _iters; \/\/ The number of test repetitions$/;"	m	class:StressTestIMesh	file:
_iters	src/dm/impls/mesh/examples/tests/isection1.cxx	/^  PetscInt               _iters; \/\/ The number of test repetitions$/;"	m	class:StressTestSection	file:
_iters	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  PetscInt             _iters; \/\/ The number of test repetitions$/;"	m	class:FunctionTestISieve	file:
_iters	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  PetscInt             _iters; \/\/ The number of test repetitions$/;"	m	class:MemoryTestISieve	file:
_iters	src/dm/impls/mesh/examples/tests/section1.cxx	/^  PetscInt               _iters; \/\/ The number of test repetitions$/;"	m	class:StressTestGeneralMeshSection	file:
_iters	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  PetscInt              _iters; \/\/ The number of test repetitions$/;"	m	class:FunctionTestHatSieve	file:
_iters	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  PetscInt              _iters; \/\/ The number of test repetitions$/;"	m	class:StressTestHatSieve	file:
_iters	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  PetscInt             _iters; \/\/ The number of test repetitions$/;"	m	class:StressTestGeneralSieve	file:
_itor	include/sieve/ALE_containers.hh	/^      itor_type      _itor;$/;"	m	class:ALE::IndexSequence::iterator
_itor	include/sieve/LabelSifter.hh	/^        itor_type      _itor;$/;"	m	class:ALE::NewSifterDef::IndexSequenceTraits::iterator_base
_itor	include/sieve/Sifter.hh	/^        itor_type      _itor;$/;"	m	class:ALE::SifterDef::IndexSequenceTraits::iterator_base
_l_cell_integrals	include/sieve/UFCProblem.hh	/^      std::map<int, ufc::cell_integral *> _l_cell_integrals;$/;"	m	class:ALE::Problem::UFCHook
_l_exterior_facet_integrals	include/sieve/UFCProblem.hh	/^      std::map<int, ufc::exterior_facet_integral *> _l_exterior_facet_integrals;$/;"	m	class:ALE::Problem::UFCHook
_l_finite_element	include/sieve/UFCProblem.hh	/^      ufc::finite_element * _l_finite_element; \/\/ditto$/;"	m	class:ALE::Problem::UFCHook
_l_interior_facet_integrals	include/sieve/UFCProblem.hh	/^      std::map<int, ufc::interior_facet_integral *> _l_interior_facet_integrals;$/;"	m	class:ALE::Problem::UFCHook
_l_sub_finite_elements	include/sieve/UFCProblem.hh	/^      std::map<int, ufc::finite_element *> _l_sub_finite_elements;$/;"	m	class:ALE::Problem::UFCHook
_label	include/sieve/Sections.hh	/^    Obj<label_type> _label;$/;"	m	class:ALE::LabelBaseSection
_label	include/sieve/Sections.hh	/^    Obj<label_type> _label;$/;"	m	class:ALE::LabelBaseSectionV
_label	include/sieve/Sections.hh	/^    Obj<label_type> _label;$/;"	m	class:ALE::LabelSection
_labelName	include/sieve/FEMProblem.hh	/^      std::string     _labelName;$/;"	m	class:ALE::Problem::GeneralBoundaryCondition
_labelName	include/sieve/Mesh.hh	/^    std::string     _labelName;$/;"	m	class:ALE::BoundaryCondition
_label_marker	include/sieve/FEMProblem.hh	/^      int _label_marker;     \/\/We could use this if there's only a certain label and marker that the given integral applies to$/;"	m	class:ALE::Problem::GeneralIntegral
_label_name	include/sieve/FEMProblem.hh	/^      name_type _label_name;$/;"	m	class:ALE::Problem::GeneralIntegral
_labels	include/sieve/Mesh.hh	/^    labels_type           _labels;$/;"	m	class:ALE::Bundle
_labels	include/sieve/Mesh.hh	/^    labels_type           _labels;$/;"	m	class:ALE::IBundle
_labels	include/sieve/Topology.hh	/^    labels_type    _labels;$/;"	m	class:ALE::Topology
_lform	include/sieve/UFCProblem.hh	/^      ufc::form * _lform;$/;"	m	class:ALE::Problem::UFCHook
_localNumberings	include/sieve/INumbering.hh	/^    numberings_type   _localNumberings;$/;"	m	class:ALE::INumberingFactory
_localNumberings	include/sieve/Numbering.hh	/^    numberings_type   _localNumberings;$/;"	m	class:ALE::NumberingFactory
_localOrders	include/sieve/Numbering.hh	/^    orders_type       _localOrders;$/;"	m	class:ALE::NumberingFactory
_localSize	include/sieve/INumbering.hh	/^    int                       _localSize;$/;"	m	class:ALE::INumbering
_localSize	include/sieve/INumbering.hh	/^    int  _localSize;$/;"	m	class:ALE::IGlobalOrder
_localSize	include/sieve/Numbering.hh	/^    int                       _localSize;$/;"	m	class:ALE::Numbering
_localSize	include/sieve/Numbering.hh	/^    int  _localSize;$/;"	m	class:ALE::GlobalOrder
_log_event	src/dm/impls/mesh/ALE.cxx	/^  static std::map<std::string, LogEvent> _log_event;  \/\/ a map from event names to event numbers$/;"	m	namespace:ALE	file:
_log_initialized	include/sieve/ALE_mem.hh	/^    static bool        _log_initialized;$/;"	m	class:ALE::logged_allocator
_log_stage	src/dm/impls/mesh/ALE.cxx	/^  static std::map<std::string, LogStage> _log_stage;  \/\/ a map from stage names to stage numbers$/;"	m	namespace:ALE	file:
_m	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  ALE::Obj<ALE::Mesh>             _m;$/;"	m	class:FunctionTestIMesh	file:
_m	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  ALE::Obj<ALE::Mesh> _m;$/;"	m	class:StressTestIMesh	file:
_map	include/sieve/Field.hh	/^    const Map& _map;$/;"	m	class:ALE::SetFromMap
_marker	include/sieve/FEMProblem.hh	/^      int             _marker;$/;"	m	class:ALE::Problem::GeneralBoundaryCondition
_marker	include/sieve/Mesh.hh	/^    int             _marker;$/;"	m	class:ALE::BoundaryCondition
_markers	include/sieve/Sieve.hh	/^      Obj<markerSet> _markers;$/;"	m	class:ALE::Sieve
_match_file_hunks	config/BuildSystem/patch.py	/^  def _match_file_hunks(self, filepath, hunks):$/;"	m	class:PatchSet
_max	include/sieve/ISieve.hh	/^    point_type _min, _max;$/;"	m	class:ALE::Interval
_maxDepth	include/sieve/CartesianSieve.hh	/^    int                    _maxDepth;$/;"	m	class:ALE::CartesianBundle
_maxDepth	include/sieve/Mesh.hh	/^    int                   _maxDepth;$/;"	m	class:ALE::Bundle
_maxDepth	include/sieve/Mesh.hh	/^    int                   _maxDepth;$/;"	m	class:ALE::IBundle
_maxDepth	include/sieve/Topology.hh	/^    int            _maxDepth;$/;"	m	class:ALE::Topology
_maxDepths	include/sieve/Topology.hh	/^    max_label_type _maxDepths;$/;"	m	class:ALE::Topology
_maxDof	include/sieve/Mesh.hh	/^    int                    _maxDof;$/;"	m	class:ALE::IMesh
_maxHeight	include/sieve/CartesianSieve.hh	/^    int                    _maxHeight;$/;"	m	class:ALE::CartesianBundle
_maxHeight	include/sieve/Mesh.hh	/^    int                   _maxHeight;$/;"	m	class:ALE::Bundle
_maxHeight	include/sieve/Mesh.hh	/^    int                   _maxHeight;$/;"	m	class:ALE::IBundle
_maxHeight	include/sieve/Topology.hh	/^    int            _maxHeight;$/;"	m	class:ALE::Topology
_maxHeights	include/sieve/Topology.hh	/^    max_label_type _maxHeights;$/;"	m	class:ALE::Topology
_meetSet	include/sieve/Sieve.hh	/^      Obj<coneSet>   _meetSet;$/;"	m	class:ALE::Sieve
_mesh	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^  ALE::Obj<mesh_type> _mesh;$/;"	m	class:FunctionTestDistribution	file:
_mesh	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  ALE::Obj<mesh_type> _mesh;$/;"	m	class:FunctionTestIDistribution	file:
_mesh	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  ALE::Obj<mesh_type> _mesh;$/;"	m	class:FunctionTestIMesh	file:
_mesh	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  ALE::Obj<mesh_type> _mesh;$/;"	m	class:MemoryTestIMesh	file:
_mesh	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  ALE::Obj<mesh_type> _mesh;$/;"	m	class:StressTestIMesh	file:
_mesh	src/dm/impls/mesh/examples/tests/section1.cxx	/^  ALE::Obj<mesh_type>    _mesh;$/;"	m	class:StressTestGeneralMeshSection	file:
_min	include/sieve/ISieve.hh	/^    point_type _min, _max;$/;"	m	class:ALE::Interval
_minDepth	include/sieve/Sections.hh	/^      int              _minDepth;$/;"	m	class:ALE::New::SupportSizeSection
_minHeight	include/sieve/Sections.hh	/^      int              _minHeight;$/;"	m	class:ALE::New::ConeSizeSection
_modifiedPoints	include/sieve/Mesh.hh	/^    Obj<std::set<point_type> > _modifiedPoints;$/;"	m	class:ALE::Bundle
_modifiedPoints	include/sieve/Mesh.hh	/^    Obj<std::set<point_type> > _modifiedPoints;$/;"	m	class:ALE::IBundle
_modifiedPoints	include/sieve/Topology.hh	/^    Obj<point_set_type>    _modifiedPoints;$/;"	m	class:ALE::Topology
_mpiType	include/sieve/Completion.hh	/^      MPI_Datatype _mpiType;$/;"	m	class:ALE::New::ParallelFactory
_n_DMLabel	include/petsc-private/dmpleximpl.h	/^struct _n_DMLabel {$/;"	s
_n_ISColoring	include/petscis.h	/^struct _n_ISColoring {$/;"	s
_n_PetscBag	include/petsc-private/bagimpl.h	/^struct _n_PetscBag {$/;"	s
_n_PetscBagItem	include/petsc-private/bagimpl.h	/^struct _n_PetscBagItem {$/;"	s
_n_PetscClassPerfLog	include/petsclog.h	/^struct _n_PetscClassPerfLog {$/;"	s
_n_PetscClassRegLog	include/petsclog.h	/^struct _n_PetscClassRegLog {$/;"	s
_n_PetscEventPerfLog	include/petsclog.h	/^struct _n_PetscEventPerfLog {$/;"	s
_n_PetscEventRegLog	include/petsclog.h	/^struct _n_PetscEventRegLog {$/;"	s
_n_PetscFPT	include/petsc-private/petscfptimpl.h	/^struct _n_PetscFPT {$/;"	s
_n_PetscIntStack	include/petsc-private/logimpl.h	/^struct _n_PetscIntStack {$/;"	s
_n_PetscLayout	include/petscis.h	/^struct _n_PetscLayout{$/;"	s
_n_PetscOptions	include/petscoptions.h	/^struct _n_PetscOptions {$/;"	s
_n_PetscStageLog	include/petsclog.h	/^struct _n_PetscStageLog {$/;"	s
_n_PetscSubcomm	include/petscsys.h	/^struct _n_PetscSubcomm {$/;"	s
_n_PetscTable	include/petscctable.h	/^struct _n_PetscTable {$/;"	s
_n_PetscUniformSection	include/petsc-private/isimpl.h	/^struct _n_PetscUniformSection {$/;"	s
_n_Vecs	include/petscvec.h	/^        struct _n_Vecs  {PetscInt n; Vec v;};$/;"	s
_name	include/sieve/ALE_args.hh	/^    string _name;$/;"	m	class:ALE::ArgDB
_name	include/sieve/ALE_containers.hh	/^    std::string _name;$/;"	m	class:ALE::ParallelObject
_newDegree	include/sieve/Sieve.hh	/^        int _newDegree;$/;"	m	struct:ALE::SieveDef::Rec::degreeAdjuster
_newDegree	include/sieve/Sifter.hh	/^        int _newDegree;$/;"	m	struct:ALE::SifterDef::Rec::degreeAdjuster
_newSource	include/sieve/ALE_containers.hh	/^      source_type _newSource;$/;"	m	struct:ALE::Arrow::sourceChanger
_newSource	include/sieve/LabelSifter.hh	/^        source_type _newSource;$/;"	m	struct:ALE::NewSifterDef::Arrow::sourceChanger
_newSource	include/sieve/Sifter.hh	/^        source_type _newSource;$/;"	m	struct:ALE::SifterDef::Arrow::sourceChanger
_newTarget	include/sieve/ALE_containers.hh	/^      const target_type _newTarget;$/;"	m	struct:ALE::Arrow::targetChanger
_newTarget	include/sieve/LabelSifter.hh	/^        const target_type _newTarget;$/;"	m	struct:ALE::NewSifterDef::Arrow::targetChanger
_newTarget	include/sieve/Sifter.hh	/^        const target_type _newTarget;$/;"	m	struct:ALE::SifterDef::Arrow::targetChanger
_normalize_filenames	config/BuildSystem/patch.py	/^  def _normalize_filenames(self):$/;"	m	class:PatchSet
_numCells	include/sieve/CartesianSieve.hh	/^        int               _numCells;$/;"	m	class:ALE::CartesianSieveDef::ConeSequence::iterator
_numCells	include/sieve/CartesianSieve.hh	/^      int         _numCells;$/;"	m	class:ALE::CartesianSieveDef::ConeSequence
_numCells	include/sieve/CartesianSieve.hh	/^      int         _numCells;$/;"	m	class:ALE::CartesianSieveDef::SupportSequence
_numCells	include/sieve/CartesianSieve.hh	/^    int  _numCells;$/;"	m	class:ALE::CartesianSieve
_numVertices	include/sieve/CartesianSieve.hh	/^    int  _numVertices;$/;"	m	class:ALE::CartesianSieve
_num_coefficients	include/sieve/FEMProblem.hh	/^      int _num_coefficients; \/\/for the linear forms$/;"	m	class:ALE::Problem::GeneralIntegral
_numberings	include/sieve/INumbering.hh	/^    numberings_type   _numberings;$/;"	m	class:ALE::INumberingFactory
_numberings	include/sieve/Numbering.hh	/^    numberings_type   _numberings;$/;"	m	class:ALE::NumberingFactory
_offsets	include/sieve/INumbering.hh	/^    int                      *_offsets;$/;"	m	class:ALE::INumbering
_offsets	include/sieve/INumbering.hh	/^    int *_offsets;$/;"	m	class:ALE::IGlobalOrder
_offsets	include/sieve/Numbering.hh	/^    int                      *_offsets;$/;"	m	class:ALE::Numbering
_offsets	include/sieve/Numbering.hh	/^    int *_offsets;$/;"	m	class:ALE::GlobalOrder
_onlyParallel	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  PetscBool           _onlyParallel; \/\/ Shut off serial tests$/;"	m	class:FunctionTestIMesh	file:
_onlyParallel	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  PetscBool            _onlyParallel; \/\/ Shut off serial tests$/;"	m	class:FunctionTestISieve	file:
_options	src/dm/impls/mesh/examples/tests/sifter1.cxx	/^  Options               _options;$/;"	m	class:StressTestSifter	file:
_options	src/dm/impls/mesh/examples/tests/stl1.cxx	/^  Options _options;$/;"	m	class:MemoryTestSTL	file:
_orders	include/sieve/INumbering.hh	/^    orders_type       _orders;$/;"	m	class:ALE::INumberingFactory
_orders	include/sieve/Numbering.hh	/^    orders_type       _orders;$/;"	m	class:ALE::NumberingFactory
_ordersBC	include/sieve/Numbering.hh	/^    orders_type       _ordersBC;$/;"	m	class:ALE::NumberingFactory
_p	include/sieve/ISieve.hh	/^      point_type _p;$/;"	m	class:ALE::Interval::const_iterator
_p_Characteristic	include/petsc-private/characteristicimpl.h	/^struct _p_Characteristic {$/;"	s
_p_DM	include/petsc-private/dmimpl.h	/^struct _p_DM {$/;"	s
_p_DMKSP	include/petsc-private/kspimpl.h	/^struct _p_DMKSP {$/;"	s
_p_DMSNES	include/petsc-private/snesimpl.h	/^struct _p_DMSNES {$/;"	s
_p_DMTS	include/petsc-private/tsimpl.h	/^struct _p_DMTS {$/;"	s
_p_IS	include/petsc-private/isimpl.h	/^struct _p_IS {$/;"	s
_p_ISLocalToGlobalMapping	include/petsc-private/isimpl.h	/^struct _p_ISLocalToGlobalMapping{$/;"	s
_p_Item	include/petsc-private/characteristicimpl.h	/^typedef struct _p_Item {$/;"	s
_p_KSP	include/petsc-private/kspimpl.h	/^struct _p_KSP {$/;"	s
_p_KSPFischerGuess	include/petscksp.h	/^typedef struct _p_KSPFischerGuess {PetscInt method,curl,maxl,refcnt;PetscBool  monitor;Mat mat; KSP ksp;}* KSPFischerGuess;$/;"	s
_p_LineSearch	include/petsc-private/linesearchimpl.h	/^struct _p_LineSearch {$/;"	s
_p_Mat	include/petsc-private/matimpl.h	/^struct _p_Mat {$/;"	s
_p_MatBaseName	include/petsc-private/matimpl.h	/^struct _p_MatBaseName {$/;"	s
_p_MatCoarsen	include/petsc-private/matimpl.h	/^struct _p_MatCoarsen {$/;"	s
_p_MatFDColoring	include/petsc-private/matimpl.h	/^struct  _p_MatFDColoring{$/;"	s
_p_MatNullSpace	include/petsc-private/matimpl.h	/^struct _p_MatNullSpace {$/;"	s
_p_MatPartitioning	include/petsc-private/matimpl.h	/^struct _p_MatPartitioning {$/;"	s
_p_MatTransposeColoring	include/petsc-private/matimpl.h	/^struct  _p_MatTransposeColoring{$/;"	s
_p_PC	include/petsc-private/pcimpl.h	/^struct _p_PC {$/;"	s
_p_PetscDraw	include/petsc-private/drawimpl.h	/^struct _p_PetscDraw {$/;"	s
_p_PetscObject	include/petsc-private/petscimpl.h	/^typedef struct _p_PetscObject {$/;"	s
_p_PetscObject	include/petsc-private/petscimpl.h	/^} _p_PetscObject;$/;"	t	typeref:struct:_p_PetscObject
_p_PetscSF	include/petsc-private/sfimpl.h	/^struct _p_PetscSF {$/;"	s
_p_PetscSection	include/petsc-private/isimpl.h	/^struct _p_PetscSection {$/;"	s
_p_PetscThreadComm	include/petsc-private/threadcommimpl.h	/^struct _p_PetscThreadComm{$/;"	s
_p_PetscThreadCommJobCtx	include/petsc-private/threadcommimpl.h	/^struct  _p_PetscThreadCommJobCtx{$/;"	s
_p_PetscThreadCommJobQueue	include/petsc-private/threadcommimpl.h	/^struct _p_PetscThreadCommJobQueue{$/;"	s
_p_PetscThreadCommRedCtx	include/petsc-private/threadcommimpl.h	/^struct _p_PetscThreadCommRedCtx{$/;"	s
_p_PetscThreadCommReduction	include/petsc-private/threadcommimpl.h	/^struct _p_PetscThreadCommReduction{$/;"	s
_p_PetscViewer	include/petsc-private/viewerimpl.h	/^struct _p_PetscViewer {$/;"	s
_p_SNES	include/petsc-private/snesimpl.h	/^struct _p_SNES {$/;"	s
_p_SectionInt	include/petsc-private/meshimpl.h	/^struct _p_SectionInt {$/;"	s
_p_SectionReal	include/petsc-private/meshimpl.h	/^struct _p_SectionReal {$/;"	s
_p_TS	include/petsc-private/tsimpl.h	/^struct _p_TS {$/;"	s
_p_TSAdapt	include/petsc-private/tsimpl.h	/^struct _p_TSAdapt {$/;"	s
_p_Vec	include/petsc-private/vecimpl.h	/^struct _p_Vec {$/;"	s
_p_VecScatter	include/petsc-private/vecimpl.h	/^struct _p_VecScatter {$/;"	s
_periodicity	include/sieve/Mesh.hh	/^    std::map<int,double>   _periodicity;$/;"	m	class:ALE::IMesh
_periodicity	include/sieve/Mesh.hh	/^    std::map<int,double> _periodicity;$/;"	m	class:ALE::Mesh
_petscObj	include/sieve/ALE_mem.hh	/^    PetscObject _petscObj; \/\/ this object is used to log memory in PETSc$/;"	m	class:ALE::logged_allocator
_petscObj	include/sieve/Sifter.hh	/^    PetscObject _petscObj;$/;"	m	class:ALE::ASifter
_petsc_blockmatmult_h	include/petsc-private/kernels/blockmatmult.h	2;"	d
_points	include/sieve/Field.hh	/^    Obj<points_type>  _points;$/;"	m	class:ALE::DiscreteSieve
_points	include/sieve/Mesh.hh	/^    const PetscReal *_points;$/;"	m	class:ALE::Discretization
_points	include/sieve/Sections.hh	/^      points_type _points;$/;"	m	class:ALE::New::PartitionSection
_pos	include/sieve/CartesianSieve.hh	/^        int               _pos;$/;"	m	class:ALE::CartesianSieveDef::ConeSequence::iterator
_pos	include/sieve/CartesianSieve.hh	/^        int               _pos;$/;"	m	class:ALE::CartesianSieveDef::SupportSequence::iterator
_pos	include/sieve/ISieve.hh	/^        int               _pos;$/;"	m	class:ALE::IFSieveDef::Sequence::const_iterator
_quadSize	include/sieve/FEMProblem.hh	/^      int           _quadSize;$/;"	m	class:ALE::Problem::GeneralDiscretization
_quadSize	include/sieve/Mesh.hh	/^    int           _quadSize;$/;"	m	class:ALE::Discretization
_realSections	include/sieve/CartesianSieve.hh	/^    real_sections_type     _realSections;$/;"	m	class:ALE::CartesianBundle
_realSections	include/sieve/Mesh.hh	/^    real_sections_type    _realSections;$/;"	m	class:ALE::Bundle
_realSections	include/sieve/Mesh.hh	/^    real_sections_type    _realSections;$/;"	m	class:ALE::IBundle
_recvOverlap	include/sieve/CartesianSieve.hh	/^    Obj<recv_overlap_type> _recvOverlap;$/;"	m	class:ALE::CartesianBundle
_recvOverlap	include/sieve/Mesh.hh	/^    Obj<recv_overlap_type> _recvOverlap;$/;"	m	class:ALE::Bundle
_recvOverlap	include/sieve/Mesh.hh	/^    Obj<recv_overlap_type> _recvOverlap;$/;"	m	class:ALE::IBundle
_recvOverlap	include/sieve/Mesh.hh	/^    Obj<recv_overlap_type> _recvOverlap;$/;"	m	class:ALE::IMesh
_recvOverlap	include/sieve/Topology.hh	/^    Obj<recv_overlap_type> _recvOverlap;$/;"	m	class:ALE::Topology
_recvs	include/sieve/BasicCommunication.hh	/^    moves_type    _recvs;$/;"	m	class:ALE::MPIMover
_renumbering	include/sieve/Mesh.hh	/^    renumbering_type       _renumbering; \/\/ Maps global points to local points$/;"	m	class:ALE::Bundle
_renumbering	include/sieve/Mesh.hh	/^    renumbering_type       _renumbering;$/;"	m	class:ALE::IBundle
_renumbering	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^  std::map<point_type,point_type> _renumbering;$/;"	m	class:FunctionTestDistribution	file:
_renumbering	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  std::map<point_type,point_type> _renumbering;$/;"	m	class:FunctionTestIDistribution	file:
_renumbering	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  std::map<point_type,point_type> _renumbering;$/;"	m	class:FunctionTestIMesh	file:
_renumbering	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  std::map<point_type,point_type> _renumbering;$/;"	m	class:StressTestIMesh	file:
_repr	config/BuildSystem/config/setsBackport.py	/^    def _repr(self, sorted=False):$/;"	m	class:BaseSet
_repr	config/BuildSystem/config/setsOrdered.py	/^    def _repr(self, sorted=False):$/;"	m	class:BaseSet
_requests	include/sieve/BasicCommunication.hh	/^    requests_type _requests;$/;"	m	class:ALE::MPIMover
_requests	include/sieve/Field.hh	/^    requests_type _requests;$/;"	m	class:ALE::Field
_return	include/sieve/Field.hh	/^    Obj<coneSequence> _return;$/;"	m	class:ALE::DiscreteSieve
_rhs_function	include/sieve/UFCProblem.hh	/^      ufc::function * _rhs_function;          \/\/TODO: generalize this further$/;"	m	class:ALE::Problem::UFCDiscretization
_section	include/sieve/Sections.hh	/^      Obj<section_type> _section;$/;"	m	class:ALE::New::ArrowSection
_section	include/sieve/Sections.hh	/^      Obj<section_type> _section;$/;"	m	class:ALE::New::ConeSizeSection
_section	include/sieve/Sections.hh	/^      Obj<section_type> _section;$/;"	m	class:ALE::New::SizeSection
_section	src/dm/impls/mesh/examples/tests/isection1.cxx	/^  ALE::Obj<section_type> _section;$/;"	m	class:StressTestSection	file:
_section	src/dm/impls/mesh/examples/tests/section1.cxx	/^  ALE::Obj<section_type> _section;$/;"	m	class:StressTestGeneralMeshSection	file:
_sendOverlap	include/sieve/CartesianSieve.hh	/^    Obj<send_overlap_type> _sendOverlap;$/;"	m	class:ALE::CartesianBundle
_sendOverlap	include/sieve/Mesh.hh	/^    Obj<send_overlap_type> _sendOverlap;$/;"	m	class:ALE::Bundle
_sendOverlap	include/sieve/Mesh.hh	/^    Obj<send_overlap_type> _sendOverlap;$/;"	m	class:ALE::IBundle
_sendOverlap	include/sieve/Mesh.hh	/^    Obj<send_overlap_type> _sendOverlap;$/;"	m	class:ALE::IMesh
_sendOverlap	include/sieve/Topology.hh	/^    Obj<send_overlap_type> _sendOverlap;$/;"	m	class:ALE::Topology
_sends	include/sieve/BasicCommunication.hh	/^    moves_type    _sends;$/;"	m	class:ALE::MPIMover
_sequence	include/sieve/ALE_containers.hh	/^      sequence_type&  _sequence;$/;"	m	class:ALE::IndexSequence::iterator
_sharedStorage	include/sieve/Field.hh	/^    bool               _sharedStorage;$/;"	m	class:ALE::FEMSection
_sharedStorage	include/sieve/Field.hh	/^    bool            _sharedStorage;$/;"	m	class:ALE::GeneralSection
_sharedStorageSize	include/sieve/Field.hh	/^    int                _sharedStorageSize;$/;"	m	class:ALE::FEMSection
_sharedStorageSize	include/sieve/Field.hh	/^    int             _sharedStorageSize;$/;"	m	class:ALE::GeneralSection
_sheaf	include/sieve/Field.hh	/^    sheaf_type    _sheaf;$/;"	m	class:ALE::Field
_sheaf	include/sieve/Topology.hh	/^    sheaf_type     _sheaf;$/;"	m	class:ALE::Topology
_sieve	include/sieve/CartesianSieve.hh	/^    Obj<sieve_type>        _sieve;$/;"	m	class:ALE::CartesianBundle
_sieve	include/sieve/Mesh.hh	/^    Obj<sieve_type>       _sieve;$/;"	m	class:ALE::Bundle
_sieve	include/sieve/Mesh.hh	/^    Obj<sieve_type>       _sieve;$/;"	m	class:ALE::IBundle
_sieve	include/sieve/Sections.hh	/^      Obj<sieve_type>   _sieve;$/;"	m	class:ALE::New::ArrowSection
_sieve	include/sieve/Sections.hh	/^      Obj<sieve_type>  _sieve;$/;"	m	class:ALE::New::ConeSizeSection
_sieve	include/sieve/Sections.hh	/^      Obj<sieve_type>  _sieve;$/;"	m	class:ALE::New::SupportSizeSection
_sieve	include/sieve/Sections.hh	/^      Obj<sieve_type> _sieve;$/;"	m	class:ALE::New::ConeSection
_sieve	include/sieve/Sections.hh	/^      Obj<sieve_type> _sieve;$/;"	m	class:ALE::New::SupportSection
_sieve	include/sieve/Sections.hh	/^    Obj<sieve_type> _sieve;$/;"	m	class:ALE::BaseSection
_sieve	include/sieve/Sections.hh	/^    Obj<sieve_type> _sieve;$/;"	m	class:ALE::BaseSectionV
_sieve	include/sieve/Sections.hh	/^    Obj<sieve_type> _sieve;$/;"	m	class:ALE::ConeSection
_sieve	include/sieve/Sections.hh	/^    Obj<sieve_type> _sieve;$/;"	m	class:ALE::ConeSectionV
_sieve	include/sieve/Sections.hh	/^    Obj<sieve_type> _sieve;$/;"	m	class:ALE::ConeSizeSection
_sieve	include/sieve/Sections.hh	/^    Obj<sieve_type> _sieve;$/;"	m	class:ALE::ConeSizeSectionV
_sieve	include/sieve/Sections.hh	/^    Obj<sieve_type> _sieve;$/;"	m	class:ALE::LabelBaseSection
_sieve	include/sieve/Sections.hh	/^    Obj<sieve_type> _sieve;$/;"	m	class:ALE::LabelBaseSectionV
_sieve	include/sieve/Sections.hh	/^    Obj<sieve_type> _sieve;$/;"	m	class:ALE::LabelSection
_sieve	include/sieve/Sections.hh	/^    Obj<sieve_type> _sieve;$/;"	m	class:ALE::OrientedConeSectionV
_sieve	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  ALE::Obj<sieve_type> _sieve;$/;"	m	class:FunctionTestISieve	file:
_sieve	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  ALE::Obj<sieve_type> _sieve;$/;"	m	class:MemoryTestISieve	file:
_sieve	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^      Obj<OverlapTest::sieve_type> _sieve;$/;"	m	class:ALE::Test::SupportSizer
_sieve	src/dm/impls/mesh/examples/tests/section1.cxx	/^  ALE::Obj<sieve_type>   _sieve;$/;"	m	class:StressTestGeneralMeshSection	file:
_sieve	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  ALE::Obj<sieve_type>  _sieve;$/;"	m	class:FunctionTestHatSieve	file:
_sieve	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  ALE::Obj<sieve_type>  _sieve;$/;"	m	class:StressTestHatSieve	file:
_sieve	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  ALE::Obj<sieve_type> _sieve;$/;"	m	class:StressTestGeneralSieve	file:
_sifter	src/dm/impls/mesh/examples/tests/sifter1.cxx	/^  ALE::Obj<sifter_type> _sifter;$/;"	m	class:StressTestSifter	file:
_size	include/sieve/Sections.hh	/^      value_type        _size;$/;"	m	class:ALE::New::SizeSection
_size	include/sieve/Sections.hh	/^      value_type       _size;$/;"	m	class:ALE::New::ConeSizeSection
_size	include/sieve/Sections.hh	/^      value_type       _size;$/;"	m	class:ALE::New::SupportSizeSection
_size	include/sieve/Sections.hh	/^    int             _size;$/;"	m	class:ALE::ConeSizeSection
_size	include/sieve/Sections.hh	/^    int             _size;$/;"	m	class:ALE::ConeSizeSectionV
_size	include/sieve/Sections.hh	/^    int             _size;$/;"	m	class:ALE::LabelSection
_size	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^  PetscInt            _size;  \/\/ The interval size$/;"	m	class:FunctionTestDistribution	file:
_size	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  PetscInt            _size;  \/\/ The interval size$/;"	m	class:FunctionTestIDistribution	file:
_size	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  PetscInt            _size;         \/\/ The interval size$/;"	m	class:FunctionTestIMesh	file:
_size	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  PetscInt            _size;  \/\/ The number of mesh points$/;"	m	class:StressTestIMesh	file:
_size	src/dm/impls/mesh/examples/tests/isection1.cxx	/^  PetscInt               _size;  \/\/ The interval size$/;"	m	class:StressTestSection	file:
_size	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  PetscInt             _size;  \/\/ The interval size$/;"	m	class:FunctionTestISieve	file:
_sizes	include/sieve/CartesianSieve.hh	/^        const int        *_sizes;$/;"	m	class:ALE::CartesianSieveDef::ConeSequence::iterator
_sizes	include/sieve/CartesianSieve.hh	/^        const int        *_sizes;$/;"	m	class:ALE::CartesianSieveDef::SupportSequence::iterator
_sizes	include/sieve/CartesianSieve.hh	/^      const int  *_sizes;$/;"	m	class:ALE::CartesianSieveDef::ConeSequence
_sizes	include/sieve/CartesianSieve.hh	/^      const int  *_sizes;$/;"	m	class:ALE::CartesianSieveDef::SupportSequence
_sizes	include/sieve/CartesianSieve.hh	/^    int *_sizes;$/;"	m	class:ALE::CartesianSieve
_sizes	include/sieve/Sections.hh	/^      sizes_type _sizes;$/;"	m	class:ALE::New::PartitionSizeSection
_sizes	include/sieve/Sections.hh	/^    int             _sizes[2];$/;"	m	class:ALE::BaseSection
_sizes	include/sieve/Sections.hh	/^    int             _sizes[2];$/;"	m	class:ALE::BaseSectionV
_sizes	include/sieve/Sections.hh	/^    int             _sizes[2];$/;"	m	class:ALE::LabelBaseSection
_sizes	include/sieve/Sections.hh	/^    int             _sizes[2];$/;"	m	class:ALE::LabelBaseSectionV
_solutionSectionName	include/sieve/FEMProblem.hh	/^      name_type _solutionSectionName;$/;"	m	class:ALE::Problem::GenericFormSubProblem
_space_dimension	include/sieve/FEMProblem.hh	/^      int _space_dimension;       \/\/the number of DoFs we're dealing with here.$/;"	m	class:ALE::Problem::GeneralIntegral
_spaces	include/sieve/Field.hh	/^    std::vector<Obj<atlas_type> > _spaces;$/;"	m	class:ALE::FEMSection
_spaces	include/sieve/Field.hh	/^    std::vector<Obj<atlas_type> > _spaces;$/;"	m	class:ALE::GeneralSection
_start	include/sieve/CartesianSieve.hh	/^      point_type _start;$/;"	m	class:ALE::CartesianSieveDef::PointSequence
_support	include/sieve/Sections.hh	/^      value_type     *_support;$/;"	m	class:ALE::New::SupportSection
_supportSeq	include/sieve/LabelSifter.hh	/^    Obj<typename traits::supportSequence> _supportSeq;$/;"	m	class:ALE::LabelSifter
_supportSeq	include/sieve/Sifter.hh	/^    Obj<typename traits::supportSequence> _supportSeq;$/;"	m	class:ALE::ASifter
_supportSize	include/sieve/Sections.hh	/^      int             _supportSize;$/;"	m	class:ALE::New::SupportSection
_tag	include/sieve/BasicCommunication.hh	/^    int           _tag;$/;"	m	class:ALE::MPIMover
_tag	include/sieve/Field.hh	/^    int           _tag;$/;"	m	class:ALE::Field
_tensor_rank	include/sieve/FEMProblem.hh	/^      int _tensor_rank;           \/\/the tensor rank; it BETTER be one or two.$/;"	m	class:ALE::Problem::GeneralIntegral
_test	bin/TOPSInstaller.py	/^def _test():$/;"	f
_tmp_coefficients	include/sieve/UFCProblem.hh	/^      double * _tmp_coefficients;$/;"	m	class:ALE::Problem::UFCCellIntegral
_tmp_tensor	include/sieve/UFCProblem.hh	/^      double * _tmp_tensor;               \/\/allows for us to reorder on the fly.$/;"	m	class:ALE::Problem::UFCCellIntegral
_topological_dimension	include/sieve/FEMProblem.hh	/^      int _topological_dimension; \/\/the topological dimension of the given mesh item -- tells us if it's a cell or facet integral$/;"	m	class:ALE::Problem::GeneralIntegral
_txt	include/petscsys.hh	/^    std::ostringstream _txt;$/;"	m	class:PETSc::Exception
_txt	include/sieve/ALE_exception.hh	/^    ostrstr _txt;$/;"	m	class:ALE::XException
_unknownNumber	include/sieve/INumbering.hh	/^    const value_type  _unknownNumber;$/;"	m	class:ALE::INumberingFactory
_unknownNumber	include/sieve/Numbering.hh	/^    const value_type  _unknownNumber;$/;"	m	class:ALE::NumberingFactory
_unknownOrder	include/sieve/INumbering.hh	/^    const oValue_type _unknownOrder;$/;"	m	class:ALE::INumberingFactory
_unknownOrder	include/sieve/Numbering.hh	/^    const oValue_type _unknownOrder;$/;"	m	class:ALE::NumberingFactory
_update	config/BuildSystem/config/setsBackport.py	/^    def _update(self, iterable):$/;"	m	class:BaseSet
_update	config/BuildSystem/config/setsOrdered.py	/^    def _update(self, iterable):$/;"	m	class:BaseSet
_update_dtypes	bin/pythonscripts/PetscBinaryIO.py	/^    def _update_dtypes(self):$/;"	m	class:PetscBinaryIO
_useTwoValues	include/sieve/Sieve.hh	/^       const bool _useTwoValues;$/;"	m	class:ALE::SieveDef::RecContainerTraits::TwoValueSequence
_value	include/sieve/CartesianSieve.hh	/^        value_type        _value;$/;"	m	class:ALE::CartesianSieveDef::ConeSequence::iterator
_value	include/sieve/CartesianSieve.hh	/^        value_type        _value;$/;"	m	class:ALE::CartesianSieveDef::SupportSequence::iterator
_value	include/sieve/CartesianSieve.hh	/^        value_type _value;$/;"	m	class:ALE::CartesianSieveDef::PointSequence::iterator
_value	include/sieve/Field.hh	/^    value_type _value;$/;"	m	class:ALE::FauxConstantSection
_value	include/sieve/Field.hh	/^    value_type _value[2];$/;"	m	class:ALE::ConstantSection
_value	include/sieve/IField.hh	/^    value_type _value[2]; \/\/ Value and default value$/;"	m	class:ALE::IConstantSection
_value	include/sieve/Sections.hh	/^    int             _value;$/;"	m	class:ALE::LabelSection
_value	include/sieve/Sieve.hh	/^       const value_type _value;$/;"	m	class:ALE::SieveDef::RecContainerTraits::ValueSequence
_value	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^      value_type                   _value;$/;"	m	class:ALE::Test::SupportSizer
_valueA	include/sieve/Sieve.hh	/^       const value_type _valueA, _valueB;$/;"	m	class:ALE::SieveDef::RecContainerTraits::TwoValueSequence
_valueB	include/sieve/Sieve.hh	/^       const value_type _valueA, _valueB;$/;"	m	class:ALE::SieveDef::RecContainerTraits::TwoValueSequence
_vertex	include/sieve/CartesianSieve.hh	/^      point_type  _vertex;$/;"	m	class:ALE::CartesianSieveDef::SupportSequence
_vertexSizes	include/sieve/CartesianSieve.hh	/^      int        *_vertexSizes;$/;"	m	class:ALE::CartesianSieveDef::ConeSequence
_vertexSizes	include/sieve/CartesianSieve.hh	/^      int        *_vertexSizes;$/;"	m	class:ALE::CartesianSieveDef::SupportSequence
_weights	include/sieve/Mesh.hh	/^    const PetscReal *_weights;$/;"	m	class:ALE::Discretization
a	config/install.py	/^  a = fd.readline()$/;"	v
a	include/petscmath.h	/^struct petsc_mpiu_2int {PetscInt a,b;};$/;"	m	struct:petsc_mpiu_2int
a	include/petscmath.h	/^struct petsc_mpiu_2scalar {PetscScalar a,b;};$/;"	m	struct:petsc_mpiu_2scalar
abs	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*abs)(Vec);$/;"	m	struct:_VecOps
abspath	config/BuildSystem/patch.py	/^from os.path import exists, isabs, isfile, abspath, normpath$/;"	i
abstol	include/petsc-private/kspimpl.h	/^                  abstol,                     \/* absolute tolerance *\/$/;"	m	struct:_p_KSP
abstol	include/petsc-private/snesimpl.h	/^  PetscReal   abstol;             \/* absolute tolerance *\/$/;"	m	struct:_p_SNES
accept	include/sieve/ISieve.hh	/^      inline virtual bool accept(const point_type& point) {$/;"	f	class:ALE::ISieveVisitor::MeshNConeRetriever
accept	include/sieve/ISieve.hh	/^      inline virtual bool accept(const point_type& point) {$/;"	f	class:ALE::ISieveVisitor::NConeRetriever
accept	include/sieve/ISieve.hh	/^      inline virtual bool accept(const point_type& point) {return true;};$/;"	f	class:ALE::ISieveVisitor::PointRetriever
action	include/petsc-private/logimpl.h	/^  int            action;        \/* The type of execution *\/$/;"	m	struct:_Action
active	include/petsclog.h	/^  PetscBool      active;        \/* The flag to activate logging *\/$/;"	m	struct:__anon65
adapt	include/petsc-private/tsimpl.h	/^  TSAdapt       adapt;$/;"	m	struct:_p_TS
add	config/BuildSystem/build/bk.py	/^  def add(self, set):$/;"	m	class:Close
add	config/BuildSystem/config/libraries.py	/^  def add(self, libName, funcs, libDir = None, otherLibs = [], prototype = '', call = '', fortranMangle = 0):$/;"	m	class:Configure
add	config/BuildSystem/config/setsBackport.py	/^    def add(self, element):$/;"	m	class:Set
add	config/BuildSystem/config/setsOrdered.py	/^    def add(self, element):$/;"	m	class:Set
add	config/BuildSystem/sourceControl.py	/^  def add(self, files):$/;"	m	class:BitKeeper
add	config/BuildSystem/sourceControl.py	/^  def add(self, files):$/;"	m	class:VersionControl
add	include/sieve/Field.hh	/^    void add(const Obj<FEMSection>& x, const Obj<FEMSection>& y) {$/;"	f	class:ALE::FEMSection
add	include/sieve/Field.hh	/^    void add(const Obj<GeneralSection>& x, const Obj<GeneralSection>& y) {$/;"	f	class:ALE::GeneralSection
add	include/sieve/ISieve.hh	/^      inline static void add   (value_type& x, value_type y) {x += y;}$/;"	f	class:ALE::ISieveVisitor::UpdateVecVisitor
add	include/sieve/LabelSifter.hh	/^    void add(const Obj<Sifter_>& cbg, const Obj<AnotherSifter_>& baseRestriction = NULL) {$/;"	f	class:ALE::LabelSifter
add	include/sieve/LabelSifter.hh	/^    void add(const Obj<Sifter_>& cbg, const Obj<AnotherSifter_>& baseRestriction, Renumbering_& renumbering) {$/;"	f	class:ALE::LabelSifter
add	include/sieve/Sifter.hh	/^    void add(const Obj<Sifter_>& cbg, bool noNewPoints = false) {$/;"	f	class:ALE::ASifter
addArgument	config/BuildSystem/help.py	/^  def addArgument(self, section, name, argType, ignoreDuplicates = 0):$/;"	m	class:Help
addArgument	config/BuildSystem/help.py	/^  def addArgument(self, section, name, desc):$/;"	m	class:Info
addArgumentSubstitution	config/BuildSystem/config/base.py	/^  def addArgumentSubstitution(self, name, arg):$/;"	m	class:Configure
addArrow	include/sieve/Field.hh	/^    void addArrow(const point_type& p, const point_type& q, const Color& color) {$/;"	f	class:ALE::DiscreteSieve
addArrow	include/sieve/ISieve.hh	/^    void addArrow(const point_type& p, const point_type& q, const Color c, const bool forceSupport = false) {$/;"	f	class:ALE::IFSieve
addArrow	include/sieve/ISieve.hh	/^    void addArrow(const point_type& p, const point_type& q, const bool forceSupport = false) {$/;"	f	class:ALE::IFSieve
addArrow	include/sieve/LabelSifter.hh	/^        void addArrow(const arrow_type& a) {$/;"	f	struct:ALE::LabelSifter::__anon7::coneSequence
addArrow	include/sieve/LabelSifter.hh	/^        void addArrow(const source_type& s){$/;"	f	struct:ALE::LabelSifter::__anon7::coneSequence
addArrow	include/sieve/LabelSifter.hh	/^        void addArrow(const target_type& t){$/;"	f	struct:ALE::LabelSifter::__anon7::supportSequence
addArrow	include/sieve/LabelSifter.hh	/^        void addArrow(const typename arrow_type::flip::type& af) {$/;"	f	struct:ALE::LabelSifter::__anon7::supportSequence
addArrow	include/sieve/LabelSifter.hh	/^    virtual void addArrow(const typename traits::arrow_type& a) {$/;"	f	class:ALE::LabelSifter
addArrow	include/sieve/LabelSifter.hh	/^    virtual void addArrow(const typename traits::source_type& p, const typename traits::target_type& q) {$/;"	f	class:ALE::LabelSifter
addArrow	include/sieve/LabelSifter.hh	/^    virtual void addArrow(const typename traits::source_type& p, const typename traits::target_type& q, const int dummy) {$/;"	f	class:ALE::LabelSifter
addArrow	include/sieve/Overlap.hh	/^  PetscErrorCode addArrow(source_type s, target_type t, color_type c) {$/;"	f	class:PETSc::RecvOverlap
addArrow	include/sieve/Overlap.hh	/^  PetscErrorCode addArrow(source_type s, target_type t, color_type c) {$/;"	f	class:PETSc::SendOverlap
addArrow	include/sieve/Sifter.hh	/^        void addArrow(const arrow_type& a) {$/;"	f	struct:ALE::ASifter::__anon2::coneSequence
addArrow	include/sieve/Sifter.hh	/^        void addArrow(const source_type& s, const color_type& c){$/;"	f	struct:ALE::ASifter::__anon2::coneSequence
addArrow	include/sieve/Sifter.hh	/^        void addArrow(const target_type& t, const color_type& c){$/;"	f	struct:ALE::ASifter::__anon2::supportSequence
addArrow	include/sieve/Sifter.hh	/^        void addArrow(const typename arrow_type::flip::type& af) {$/;"	f	struct:ALE::ASifter::__anon2::supportSequence
addArrow	include/sieve/Sifter.hh	/^    virtual void addArrow(const typename traits::arrow_type& a, bool noNewPoints = false) {$/;"	f	class:ALE::ASifter
addArrow	include/sieve/Sifter.hh	/^    virtual void addArrow(const typename traits::source_type& p, const typename traits::target_type& q) {$/;"	f	class:ALE::ASifter
addArrow	include/sieve/Sifter.hh	/^    virtual void addArrow(const typename traits::source_type& p, const typename traits::target_type& q, const typename traits::color_type& color) {$/;"	f	class:ALE::ASifter
addBasePoint	include/sieve/Sifter.hh	/^    void addBasePoint(const typename traits::targetRec_type b) {$/;"	f	class:ALE::ASifter
addBasePoint	include/sieve/Sifter.hh	/^    void addBasePoint(const typename traits::target_type t) {$/;"	f	class:ALE::ASifter
addBatchBody	config/BuildSystem/config/framework.py	/^  def addBatchBody(self, statements):$/;"	m	class:Framework
addBatchCleanup	config/BuildSystem/config/framework.py	/^  def addBatchCleanup(self, cleanup):$/;"	m	class:Framework
addBatchInclude	config/BuildSystem/config/framework.py	/^  def addBatchInclude(self, includes):$/;"	m	class:Framework
addBatchLib	config/BuildSystem/config/framework.py	/^  def addBatchLib(self, libs):$/;"	m	class:Framework
addBatchSetup	config/BuildSystem/config/framework.py	/^  def addBatchSetup(self, setup):$/;"	m	class:Framework
addCapPoint	include/sieve/Sifter.hh	/^    void addCapPoint(const typename traits::sourceRec_type c) {$/;"	f	class:ALE::ASifter
addCapPoint	include/sieve/Sifter.hh	/^    void addCapPoint(const typename traits::source_type s) {$/;"	f	class:ALE::ASifter
addChild	config/BuildSystem/config/framework.py	/^  def addChild(self, config):$/;"	m	class:Framework
addClient	config/BuildSystem/build/templates/Compile.py	/^  def addClient(self, lang):$/;"	m	class:Template
addClient	config/BuildSystem/build/templates/SIDL.py	/^  def addClient(self, lang):$/;"	m	class:Template
addClient	config/BuildSystem/build/templates/usingSIDL.py	/^  def addClient(self, lang):$/;"	m	class:UsingSIDL
addClosure	include/sieve/Selection.hh	/^    static void addClosure(const Obj<sieve_type>& sieveA, const Obj<sieve_type>& sieveB, const point_type& p, const int depth = 1) {$/;"	f	class:ALE::Selection
addClosureV	include/sieve/Selection.hh	/^    static void addClosureV(const Obj<SieveTypeA>& sieveA, const Obj<SieveTypeB>& sieveB, const point_type& p, const int depth = 1) {$/;"	f	class:ALE::Selection
addCompilerFlag	config/BuildSystem/config/setCompilers.py	/^  def addCompilerFlag(self, flag, includes = '', body = '', extraflags = '', compilerOnly = 0):$/;"	m	class:Configure
addCone	include/sieve/LabelSifter.hh	/^    addCone(const Obj<sourceInputSequence>& sources, const typename traits::target_type& target){$/;"	f	class:ALE::LabelSifter
addCone	include/sieve/LabelSifter.hh	/^    void addCone(const typename traits::source_type& source, const typename traits::target_type& target){$/;"	f	class:ALE::LabelSifter
addCone	include/sieve/Sifter.hh	/^    addCone(const Obj<sourceInputSequence>& sources, const typename traits::target_type& target, const typename traits::color_type& color){$/;"	f	class:ALE::ASifter
addCone	include/sieve/Sifter.hh	/^    void addCone(const Obj<sourceInputSequence>& sources, const typename traits::target_type& target) {$/;"	f	class:ALE::ASifter
addCone	include/sieve/Sifter.hh	/^    void addCone(const typename traits::source_type& source, const typename traits::target_type& target){$/;"	f	class:ALE::ASifter
addCone	include/sieve/Sifter.hh	/^    void addCone(const typename traits::source_type& source, const typename traits::target_type& target, const typename traits::color_type& color) {$/;"	f	class:ALE::ASifter
addConeSize	include/sieve/ISieve.hh	/^    void addConeSize(const point_type& p, const index_type c) {$/;"	f	class:ALE::IFSieve
addConstraintDimension	include/sieve/Field.hh	/^    void addConstraintDimension(const point_type& p, const int numConstraints) {$/;"	f	class:ALE::FEMSection
addConstraintDimension	include/sieve/Field.hh	/^    void addConstraintDimension(const point_type& p, const int numConstraints) {$/;"	f	class:ALE::GeneralSection
addConstraintDimension	include/sieve/Field.hh	/^    void addConstraintDimension(const point_type& p, const int numConstraints) {$/;"	f	class:ALE::Section
addConstraintDimension	include/sieve/Field.hh	/^    void addConstraintDimension(const point_type& p, const int numConstraints, const int space) {$/;"	f	class:ALE::GeneralSection
addDefine	config/BuildSystem/config/base.py	/^  def addDefine(self, name, value):$/;"	m	class:Configure
addDependency	config/BuildSystem/maker.py	/^  def addDependency(self, url, sidlFile, make = None):$/;"	m	class:SIDLMake
addDependency	config/BuildSystem/sourceDatabase.py	/^  def addDependency(self, source, dependency):$/;"	m	class:SourceDB
addDependencyIncludes	config/BuildSystem/maker.py	/^  def addDependencyIncludes(self, compiler, language):$/;"	m	class:SIDLMake
addDependencyLibraries	config/BuildSystem/maker.py	/^  def addDependencyLibraries(self, linker, language):$/;"	m	class:SIDLMake
addDuplicate	config/BuildSystem/config/setsOrdered.py	/^    def addDuplicate(self, element):$/;"	m	class:Set
addEdges	config/BuildSystem/build/buildGraph.py	/^  def addEdges(self, vertex, inputs = [], outputs = []):$/;"	m	class:BuildGraph
addEdges	config/BuildSystem/graph.py	/^  def addEdges(self, vertex, inputs = [], outputs = []):$/;"	m	class:DirectedGraph
addFiberDimension	include/sieve/Field.hh	/^    void addFiberDimension(const point_type& p, int dim) {$/;"	f	class:ALE::ConstantSection
addFiberDimension	include/sieve/Field.hh	/^    void addFiberDimension(const point_type& p, int dim) {$/;"	f	class:ALE::FEMSection
addFiberDimension	include/sieve/Field.hh	/^    void addFiberDimension(const point_type& p, int dim) {$/;"	f	class:ALE::FauxConstantSection
addFiberDimension	include/sieve/Field.hh	/^    void addFiberDimension(const point_type& p, int dim) {$/;"	f	class:ALE::GeneralSection
addFiberDimension	include/sieve/Field.hh	/^    void addFiberDimension(const point_type& p, int dim) {$/;"	f	class:ALE::NewUniformSection
addFiberDimension	include/sieve/Field.hh	/^    void addFiberDimension(const point_type& p, int dim) {$/;"	f	class:ALE::Section
addFiberDimension	include/sieve/Field.hh	/^    void addFiberDimension(const point_type& p, int dim) {$/;"	f	class:ALE::UniformSection
addFiberDimension	include/sieve/IField.hh	/^    void addFiberDimension(const point_type& p, int dim) {$/;"	f	class:ALE::IConstantSection
addFiberDimension	include/sieve/IField.hh	/^    void addFiberDimension(const point_type& p, int dim) {$/;"	f	class:ALE::IUniformSection
addFunc	config/builder.py	/^  def addFunc(self, func):$/;"	m	class:Future
addHole	include/sieve/Mesh.hh	/^    void addHole(const double hole[]) {$/;"	f	class:ALE::IMesh
addHole	include/sieve/Mesh.hh	/^    void addHole(const double hole[]) {$/;"	f	class:ALE::Mesh
addImplementation	config/BuildSystem/project.py	/^  def addImplementation(self, cls, library, lang):$/;"	m	class:Project
addLdPath	config/BuildSystem/config/setCompilers.py	/^  addLdPath = staticmethod(addLdPath)$/;"	v	class:Configure
addLdPath	config/BuildSystem/config/setCompilers.py	/^  def addLdPath(path):$/;"	m	class:Configure
addLinkerFlag	config/BuildSystem/config/setCompilers.py	/^  def addLinkerFlag(self, flag):$/;"	m	class:Configure
addMakeMacro	config/BuildSystem/config/base.py	/^  def addMakeMacro(self, name, value):$/;"	m	class:Configure
addMakeRule	config/BuildSystem/config/base.py	/^  def addMakeRule(self, name, dependencies, rule = []):$/;"	m	class:Configure
addOutputFile	config/BuildSystem/build/transform.py	/^  def addOutputFile(self, f, set = None):$/;"	m	class:Transform
addPackageDependency	config/BuildSystem/config/framework.py	/^  def addPackageDependency(self, dependency, depPath = None):$/;"	m	class:Framework
addPoint	include/sieve/Field.hh	/^    void addPoint(const Obj<Points>& points) {$/;"	f	class:ALE::ConstantSection
addPoint	include/sieve/Field.hh	/^    void addPoint(const Obj<Points>& points) {$/;"	f	class:ALE::FauxConstantSection
addPoint	include/sieve/Field.hh	/^    void addPoint(const Obj<Points>& points) {$/;"	f	class:ALE::NewUniformSection
addPoint	include/sieve/Field.hh	/^    void addPoint(const Obj<Points>& points) {$/;"	f	class:ALE::UniformSection
addPoint	include/sieve/Field.hh	/^    void addPoint(const Points& points) {$/;"	f	class:ALE::ConstantSection
addPoint	include/sieve/Field.hh	/^    void addPoint(const Points& points) {$/;"	f	class:ALE::FauxConstantSection
addPoint	include/sieve/Field.hh	/^    void addPoint(const point_type& point) {$/;"	f	class:ALE::ConstantSection
addPoint	include/sieve/Field.hh	/^    void addPoint(const point_type& point) {$/;"	f	class:ALE::DiscreteSieve
addPoint	include/sieve/Field.hh	/^    void addPoint(const point_type& point) {$/;"	f	class:ALE::FauxConstantSection
addPoint	include/sieve/Field.hh	/^    void addPoint(const point_type& point) {$/;"	f	class:ALE::NewUniformSection
addPoint	include/sieve/Field.hh	/^    void addPoint(const point_type& point) {$/;"	f	class:ALE::UniformSection
addPoint	include/sieve/Field.hh	/^    void addPoint(const point_type& point, const int dim) {$/;"	f	class:ALE::GeneralSection
addPoint	include/sieve/Field.hh	/^    void addPoint(const point_type& point, const int dim) {$/;"	f	class:ALE::Section
addPoint	include/sieve/IField.hh	/^    void addPoint(const Obj<Points>& points) {$/;"	f	class:ALE::IConstantSection
addPoint	include/sieve/IField.hh	/^    void addPoint(const Obj<Points>& points) {$/;"	f	class:ALE::IUniformSection
addPoint	include/sieve/IField.hh	/^    void addPoint(const Points& points) {$/;"	f	class:ALE::IConstantSection
addPoint	include/sieve/IField.hh	/^    void addPoint(const point_type& point) {$/;"	f	class:ALE::IConstantSection
addPoint	include/sieve/IField.hh	/^    void addPoint(const point_type& point) {$/;"	f	class:ALE::IUniformSection
addPoint	include/sieve/IField.hh	/^    void addPoint(const point_type& point, const int dim) {$/;"	f	class:ALE::IGeneralSection
addPoints	include/sieve/Field.hh	/^    void addPoints(const Obj<Input>& points) {$/;"	f	class:ALE::DiscreteSieve
addPoints	include/sieve/Field.hh	/^    void addPoints(const Obj<Sequence>& points, const int dim) {$/;"	f	class:ALE::Section
addPrototype	config/BuildSystem/config/base.py	/^  def addPrototype(self, prototype, language = 'All'):$/;"	m	class:Configure
addRef	include/sieve/ALE_mem.hh	/^    void addRef() {if (refCnt) {(*refCnt)++;}}$/;"	f	class:ALE::Obj
addRepositoryDirs	config/BuildSystem/build/templates/SIDL.py	/^  def addRepositoryDirs(self, compiler):$/;"	m	class:Template
addServer	config/BuildSystem/build/templates/Compile.py	/^  def addServer(self, lang):$/;"	m	class:Template
addServer	config/BuildSystem/build/templates/SIDL.py	/^  def addServer(self, lang):$/;"	m	class:Template
addServer	config/BuildSystem/build/templates/usingSIDL.py	/^  def addServer(self, lang):$/;"	m	class:UsingSIDL
addSpace	include/sieve/Field.hh	/^    void addSpace() {$/;"	f	class:ALE::FEMSection
addSpace	include/sieve/Field.hh	/^    void addSpace() {};$/;"	f	class:ALE::Section
addSpace	include/sieve/Field.hh	/^    void addSpace(int comp = 1) {$/;"	f	class:ALE::GeneralSection
addSpace	include/sieve/IField.hh	/^    void addSpace(int comp = 1) {$/;"	f	class:ALE::IGeneralSection
addStaticPackage	config/BuildSystem/build/templates/SIDL.py	/^  def addStaticPackage(self, package):$/;"	m	class:Template
addStaticPackage	config/BuildSystem/build/templates/usingSIDL.py	/^  def addStaticPackage(self, package):$/;"	m	class:UsingSIDL
addSubgraph	config/BuildSystem/build/buildGraph.py	/^  def addSubgraph(self, graph):$/;"	m	class:BuildGraph
addSubgraph	config/BuildSystem/graph.py	/^  def addSubgraph(self, graph):$/;"	m	class:DirectedGraph
addSubstitution	config/BuildSystem/config/base.py	/^  def addSubstitution(self, name, value):$/;"	m	class:Configure
addSubstitutionFile	config/BuildSystem/config/framework.py	/^  def addSubstitutionFile(self, inName, outName = ''):$/;"	m	class:Framework
addSupport	include/sieve/LabelSifter.hh	/^    void addSupport(const typename traits::source_type& source, const Obj<targetInputSequence >& targets) {$/;"	f	class:ALE::LabelSifter
addSupport	include/sieve/Sifter.hh	/^    void addSupport(const typename traits::source_type& source, const Obj<targetInputSequence >& targets) {$/;"	f	class:ALE::ASifter
addSupport	include/sieve/Sifter.hh	/^    void addSupport(const typename traits::source_type& source, const Obj<targetInputSequence>& targets, const typename traits::color_type& color) {$/;"	f	class:ALE::ASifter
addSupportSize	include/sieve/ISieve.hh	/^    void addSupportSize(const point_type& p, const index_type s) {$/;"	f	class:ALE::IFSieve
addTypedef	config/BuildSystem/config/base.py	/^  def addTypedef(self, name, value):$/;"	m	class:Configure
addValue	include/sieve/Mesh.hh	/^    void addValue(const Obj<label_type>& label, const point_type& point, const int value) {$/;"	f	class:ALE::IBundle
addVertex	config/BuildSystem/build/buildGraph.py	/^  def addVertex(self, vertex):$/;"	m	class:BuildGraph
addVertex	config/BuildSystem/graph.py	/^  def addVertex(self, vertex):$/;"	m	class:DirectedGraph
address	include/sieve/ALE_mem.hh	/^    const_pointer address(const_reference _x) const    { return alloc.address(_x);                                    };$/;"	f	class:ALE::polymorphic_allocator
address	include/sieve/ALE_mem.hh	/^    pointer       address(reference _x) const          { return alloc.address(_x);                                    };$/;"	f	class:ALE::polymorphic_allocator
address	include/sieve/ALE_mem.hh	/^    pointer address(reference x) const {return &x;}$/;"	f	class:ALE::malloc_allocator
adj	include/petsc-private/matimpl.h	/^  Mat         adj;$/;"	m	struct:_p_MatPartitioning
adjGraph	include/petscdmmesh.hh	/^  ALE::Mesh<PetscInt,PetscScalar>::sieve_type& adjGraph;$/;"	m	class:AdjVisitor
adjPregion	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^  double * adjPregion; \/\/the average number of adjacent regions per region.$/;"	m	struct:ALE::Coarsener::coarsen_Stats
adjacency	include/sieve/Partitioner.hh	/^      int                       *adjacency;$/;"	m	class:ALE::Partitioner::AdjVisitor
adjustDegree	include/sieve/Sieve.hh	/^      void adjustDegree(const typename traits::rec_type::point_type& p, int delta) {$/;"	f	struct:ALE::SieveDef::RecContainer
adjustDegree	include/sieve/Sifter.hh	/^      void adjustDegree(const typename traits::rec_type::point_type& p, int delta) {$/;"	f	struct:ALE::SifterDef::RecContainer
adjustFilter	src/dm/impls/mesh/examples/tests/ex08.cxx	/^void adjustFilter(ArrowContainer& ac, ArrowContainer::filter_object_type& f, ArrowContainer::predicate_type width, const char *label) {$/;"	f
affinities	include/petsc-private/threadcommimpl.h	/^  PetscInt                *affinities;  \/* Thread affinity *\/$/;"	m	struct:_p_PetscThreadComm
agg_lists	include/petsc-private/matimpl.h	/^  PetscCoarsenData *agg_lists;$/;"	m	struct:_p_MatCoarsen
alestagepop_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  alestagepop_(PetscInt *debug, int *ierr)$/;"	f
alestagepop_	src/dm/impls/mesh/ftn-custom/zmesh.c	27;"	d	file:
alestagepop_	src/dm/impls/mesh/ftn-custom/zmesh.c	52;"	d	file:
alestageprintmemory_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  alestageprintmemory_(MPI_Fint * comm,CHAR name PETSC_MIXED_LEN(lenN), int *ierr PETSC_END_LEN(lenN))$/;"	f
alestageprintmemory_	src/dm/impls/mesh/ftn-custom/zmesh.c	28;"	d	file:
alestageprintmemory_	src/dm/impls/mesh/ftn-custom/zmesh.c	53;"	d	file:
alestagepush_	src/dm/impls/mesh/ftn-custom/zmesh.c	26;"	d	file:
alestagepush_	src/dm/impls/mesh/ftn-custom/zmesh.c	51;"	d	file:
all	config/BuildSystem/build/__init__.py	/^all = ['bk', 'buildGraph', 'builder', 'compile', 'fileState', 'fileset', 'framework', 'processor', 'templates', 'transform']$/;"	v
all	config/BuildSystem/build/compile/__init__.py	/^all = ['C', 'Cxx', 'F90', 'SIDL']$/;"	v
all	config/BuildSystem/build/templates/__init__.py	/^all = ['Compile', 'SIDL', 'usingC', 'usingCxx', 'usingMathematica', 'usingPython', 'usingSIDL']$/;"	v
all	config/BuildSystem/config/__init__.py	/^all = ['base', 'compilers', 'framework', 'functions', 'headers', 'libraries', 'types', 'atomics']$/;"	v
all	config/BuildSystem/config/compile/__init__.py	/^all = ['C']$/;"	v
all	config/BuildSystem/config/packages/__init__.py	/^all = ['f2cblaslapack','BlasLapack', 'CHOLMOD', 'exodusii', 'scientificpython', 'fiat', 'MOAB', 'MPI', 'netcdf', 'PETSc', 'UMFPACK', 'boost', 'cusp', 'thrust', 'hdf5', 'netcdf-cxx']$/;"	v
all	config/BuildSystem/regression/__init__.py	/^all = ['testCase']$/;"	v
all	config/PETSc/packages/__init__.py	/^all = []$/;"	v
all	config/PETSc/utilities/__init__.py	/^all = ['BLAS', 'ML', 'LAPACK', 'MPI', 'Mathematica', 'Matlab', 'metis', 'parmetis', 'Triangle']$/;"	v
alloc	include/sieve/ALE_mem.hh	/^    static Alloc alloc;                            \/\/ The underlying specific allocator$/;"	m	class:ALE::polymorphic_allocator
alloc	include/sieve/ALE_mem.hh	/^  typename polymorphic_allocator<T>::Alloc polymorphic_allocator<T>::alloc;$/;"	m	class:ALE::polymorphic_allocator
alloc_type	include/sieve/Completion.hh	/^      typedef Alloc_                                                                      alloc_type;$/;"	t	class:ALE::New::Completion
alloc_type	include/sieve/Distribution.hh	/^    typedef typename bundle_type::alloc_type                                            alloc_type;$/;"	t	class:ALE::Distribution
alloc_type	include/sieve/Field.hh	/^    typedef Alloc_                                                  alloc_type;$/;"	t	class:ALE::ConstantSection
alloc_type	include/sieve/Field.hh	/^    typedef Alloc_                                                  alloc_type;$/;"	t	class:ALE::FEMSection
alloc_type	include/sieve/Field.hh	/^    typedef Alloc_                                                  alloc_type;$/;"	t	class:ALE::GeneralSection
alloc_type	include/sieve/Field.hh	/^    typedef Alloc_                                                  alloc_type;$/;"	t	class:ALE::Section
alloc_type	include/sieve/Field.hh	/^    typedef Alloc_                                           alloc_type;$/;"	t	class:ALE::NewUniformSection
alloc_type	include/sieve/Field.hh	/^    typedef Alloc_                                           alloc_type;$/;"	t	class:ALE::UniformSection
alloc_type	include/sieve/Field.hh	/^    typedef Alloc_                              alloc_type;$/;"	t	class:ALE::DiscreteSieve
alloc_type	include/sieve/Field.hh	/^    typedef Alloc_ alloc_type;$/;"	t	class:ALE::FauxConstantSection
alloc_type	include/sieve/IField.hh	/^    typedef Alloc_                                                  alloc_type;$/;"	t	class:ALE::IUniformSection
alloc_type	include/sieve/IField.hh	/^    typedef Alloc_ alloc_type;$/;"	t	class:ALE::IConstantSection
alloc_type	include/sieve/IField.hh	/^    typedef typename base::alloc_type       alloc_type;$/;"	t	class:ALE::IGeneralSection
alloc_type	include/sieve/IField.hh	/^    typedef typename base::alloc_type       alloc_type;$/;"	t	class:ALE::ISection
alloc_type	include/sieve/INumbering.hh	/^    typedef Alloc_                                                                               alloc_type;$/;"	t	class:ALE::INumberingFactory
alloc_type	include/sieve/ISieve.hh	/^    typedef Alloc_            alloc_type;$/;"	t	class:ALE::Interval
alloc_type	include/sieve/LabelSifter.hh	/^      typedef Alloc_ alloc_type;$/;"	t	struct:ALE::NewSifterDef::ArrowContainer
alloc_type	include/sieve/LabelSifter.hh	/^    typedef Alloc_                           alloc_type;$/;"	t	class:ALE::LabelSifter
alloc_type	include/sieve/Mesh.hh	/^    typedef malloc_allocator<point_type>                              alloc_type;$/;"	t	class:ALE::Bundle
alloc_type	include/sieve/Mesh.hh	/^    typedef malloc_allocator<point_type>                              alloc_type;$/;"	t	class:ALE::IBundle
alloc_type	include/sieve/Mesh.hh	/^    typedef typename base_type::alloc_type            alloc_type;$/;"	t	class:ALE::IMesh
alloc_type	include/sieve/Mesh.hh	/^    typedef typename base_type::alloc_type            alloc_type;$/;"	t	class:ALE::Mesh
alloc_type	include/sieve/Numbering.hh	/^    typedef Alloc_                                          alloc_type;$/;"	t	class:ALE::NumberingFactory
alloc_type	include/sieve/Ordering.hh	/^    typedef Alloc_                   alloc_type;$/;"	t	class:ALE::Ordering
alloc_type	include/sieve/ParallelMapping.hh	/^    typedef Alloc_ alloc_type;$/;"	t	class:ALE::OverlapBuilder
alloc_type	include/sieve/Partitioner.hh	/^      typedef Alloc_                           alloc_type;$/;"	t	class:ALE::New::Partitioner
alloc_type	include/sieve/Partitioner.hh	/^      typedef Alloc_    alloc_type;$/;"	t	class:ALE::Chaco::Partitioner
alloc_type	include/sieve/Partitioner.hh	/^      typedef Alloc_ alloc_type;$/;"	t	class:ALE::ParMetis::Partitioner
alloc_type	include/sieve/Partitioner.hh	/^      typedef Alloc_ alloc_type;$/;"	t	class:ALE::Simple::Partitioner
alloc_type	include/sieve/Partitioner.hh	/^    typedef Alloc_                               alloc_type;$/;"	t	class:ALE::Partitioner
alloc_type	include/sieve/SectionCompletion.hh	/^      typedef Alloc_                                                                           alloc_type;$/;"	t	class:ALE::New::SectionCompletion
alloc_type	include/sieve/Sections.hh	/^    typedef Alloc_                                    alloc_type;$/;"	t	class:ALE::BaseSection
alloc_type	include/sieve/Sections.hh	/^    typedef Alloc_                                    alloc_type;$/;"	t	class:ALE::BaseSectionV
alloc_type	include/sieve/Sections.hh	/^    typedef Alloc_                                    alloc_type;$/;"	t	class:ALE::LabelBaseSection
alloc_type	include/sieve/Sections.hh	/^    typedef Alloc_                                    alloc_type;$/;"	t	class:ALE::LabelBaseSectionV
alloc_type	include/sieve/Sections.hh	/^    typedef Alloc_                                   alloc_type;$/;"	t	class:ALE::ConeSectionV
alloc_type	include/sieve/Sections.hh	/^    typedef Alloc_                                   alloc_type;$/;"	t	class:ALE::OrientedConeSectionV
alloc_type	include/sieve/Sections.hh	/^    typedef Alloc_                                  alloc_type;$/;"	t	class:ALE::ConeSection
alloc_type	include/sieve/Sections.hh	/^    typedef Alloc_                               alloc_type;$/;"	t	class:ALE::ConeSizeSectionV
alloc_type	include/sieve/Sections.hh	/^    typedef Alloc_                              alloc_type;$/;"	t	class:ALE::ConeSizeSection
alloc_type	include/sieve/Sections.hh	/^    typedef Alloc_                              alloc_type;$/;"	t	class:ALE::LabelSection
alloc_type	include/sieve/Topology.hh	/^    typedef Alloc_                                                alloc_type;$/;"	t	class:ALE::Topology
allocate	include/sieve/ALE_mem.hh	/^    T*            allocate(size_type _n)               { return (T*)universal_allocator::allocate(_n*sz);            };$/;"	f	class:ALE::polymorphic_allocator
allocate	include/sieve/ALE_mem.hh	/^    pointer allocate(size_type n, const_pointer = 0) {$/;"	f	class:ALE::malloc_allocator
allocate	include/sieve/ALE_mem.hh	/^  T*  logged_allocator<T, O>::allocate(size_type _n) {$/;"	f	class:ALE::logged_allocator
allocate	include/sieve/CartesianSieve.hh	/^    void allocate(const Obj<Section_>& section) {$/;"	f	class:ALE::CartesianMesh
allocate	include/sieve/Field.hh	/^    void allocate() {$/;"	f	class:ALE::Field
allocate	include/sieve/ISieve.hh	/^    void allocate() {$/;"	f	class:ALE::IFSieve
allocate	include/sieve/LabelSifter.hh	/^    void allocate() {}$/;"	f	class:ALE::LabelSifter
allocate	include/sieve/Mesh.hh	/^    void allocate(const Obj<Section>& section) {$/;"	f	class:ALE::IMesh
allocate	include/sieve/Mesh.hh	/^    void allocate(const Obj<Section_>& section, const Obj<send_overlap_type>& sendOverlap = NULL) {$/;"	f	class:ALE::Bundle
allocate	src/dm/impls/mesh/ALE.cxx	/^  char *universal_allocator::allocate(const universal_allocator::size_type& sz) {$/;"	f	class:ALE::universal_allocator
allocatePoint	include/sieve/Field.hh	/^    void allocatePoint() {$/;"	f	class:ALE::FEMSection
allocatePoint	include/sieve/Field.hh	/^    void allocatePoint() {$/;"	f	class:ALE::GeneralSection
allocatePoint	include/sieve/Field.hh	/^    void allocatePoint() {$/;"	f	class:ALE::Section
allocatePoint	include/sieve/Field.hh	/^    void allocatePoint() {};$/;"	f	class:ALE::ConstantSection
allocatePoint	include/sieve/Field.hh	/^    void allocatePoint() {};$/;"	f	class:ALE::NewUniformSection
allocatePoint	include/sieve/Field.hh	/^    void allocatePoint() {};$/;"	f	class:ALE::UniformSection
allocatePoint	include/sieve/IField.hh	/^    void allocatePoint() {$/;"	f	class:ALE::IUniformSection
allocateStorage	include/sieve/Field.hh	/^    void allocateStorage() {$/;"	f	class:ALE::FEMSection
allocateStorage	include/sieve/Field.hh	/^    void allocateStorage() {$/;"	f	class:ALE::GeneralSection
allocateStorage	include/sieve/Field.hh	/^    void allocateStorage() {$/;"	f	class:ALE::Section
allocated	include/sieve/ISieve.hh	/^      bool                allocated;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
allocated	include/sieve/ISieve.hh	/^      bool               allocated;$/;"	m	class:ALE::ISieveVisitor::RestrictVecVisitor
allocated	include/sieve/ISieve.hh	/^      bool           allocated;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
allocated	include/sieve/ISieve.hh	/^      bool           allocated;$/;"	m	class:ALE::ISieveVisitor::RestrictVisitor
allocatedPoints	include/sieve/ISieve.hh	/^      bool           allocatedPoints;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
allocator	include/sieve/ALE_containers.hh	/^    typedef ALE_ALLOCATOR<Point> allocator;$/;"	t	class:ALE::Point
allocator	include/sieve/ALE_mem.hh	/^    Allocator& allocator() {$/;"	f	class:ALE::Obj
alpha	include/petsc-private/matimpl.h	/^  PetscScalar*   alpha;                 \/* for projections *\/$/;"	m	struct:_p_MatNullSpace
alpha	include/petsc-private/snesimpl.h	/^  PetscReal alpha;               \/* power for version 2 rtol computation *\/$/;"	m	struct:__anon5
alpha2	include/petsc-private/snesimpl.h	/^  PetscReal alpha2;              \/* power for safeguard *\/$/;"	m	struct:__anon5
alreadyprinted	include/petscoptions.h	/^  PetscBool        printhelp,changedmethod,alreadyprinted;$/;"	m	struct:__anon35
alternateConfigureLibrary	config/BuildSystem/config/package.py	/^  def alternateConfigureLibrary(self):$/;"	m	class:Package
alternateConfigureLibrary	config/BuildSystem/config/packages/MPI.py	/^  def alternateConfigureLibrary(self):$/;"	m	class:Configure
alternateConfigureLibrary	config/PETSc/packages/Matlab.py	/^  def alternateConfigureLibrary(self):$/;"	m	class:Configure
alternateConfigureLibrary	config/PETSc/packages/c2html.py	/^  def alternateConfigureLibrary(self):$/;"	m	class:Configure
alternateConfigureLibrary	config/PETSc/packages/cmake.py	/^  def alternateConfigureLibrary(self):$/;"	m	class:Configure
alternateConfigureLibrary	config/PETSc/packages/cproto.py	/^  def alternateConfigureLibrary(self):$/;"	m	class:Configure
alternateConfigureLibrary	config/PETSc/packages/mpi4py.py	/^  def alternateConfigureLibrary(self):$/;"	m	class:Configure
alternateConfigureLibrary	config/PETSc/packages/petsc4py.py	/^  def alternateConfigureLibrary(self):$/;"	m	class:Configure
alternateConfigureLibrary	config/PETSc/packages/sowing.py	/^  def alternateConfigureLibrary(self):$/;"	m	class:Configure
amsblock	include/petsc-private/petscimpl.h	/^  PetscBool            amsblock;$/;"	m	struct:_p_PetscObject
amsmem	include/petsc-private/petscimpl.h	/^  PetscInt             amsmem;$/;"	m	struct:_p_PetscObject
amspublishblock	include/petsc-private/petscimpl.h	/^  PetscBool            amspublishblock; \/* if PETSC_TRUE and publishing objects then will block at PetscObjectAMSBlock() *\/$/;"	m	struct:_p_PetscObject
any	config/BuildSystem/config/setCompilers.py	/^  def any(lst):$/;"	f	function:noCheck
ao	include/petsc-private/dmdaimpl.h	/^  AO                    ao;                    \/* application ordering context *\/$/;"	m	struct:__anon23
app	bin/TOPSGenerator.py	/^        app = enterbox("Name of application?",title)$/;"	v
app	include/web/AMSOptions.py	/^    app = AMSJavascriptExample()$/;"	v	class:AMSJavascriptExample
app	include/web/AMSSnoopObjects.py	/^    app = AMSSnoopObjects()$/;"	v	class:AMSSnoopObjects
app	include/web/AMSSnoopStack.py	/^    app = AMSSnoopStack()$/;"	v	class:AMSSnoopStack
append	config/BuildSystem/build/fileset.py	/^  def append(self, item):$/;"	m	class:FileSet
appendGraph	config/BuildSystem/build/buildGraph.py	/^  def appendGraph(self, graph):$/;"	m	class:BuildGraph
appendGraph	config/BuildSystem/graph.py	/^  def appendGraph(self, graph):$/;"	m	class:DirectedGraph
appendPackages	config/BuildSystem/project.py	/^  def appendPackages(self, packages):$/;"	m	class:Project
appendPath	config/BuildSystem/project.py	/^  def appendPath(self, lang, dir):$/;"	m	class:Project
apply	config/BuildSystem/patch.py	/^  def apply(self):$/;"	m	class:PatchSet
apply	include/petsc-private/linesearchimpl.h	/^  SNESLineSearchApplyFunc        apply;$/;"	m	struct:_LineSearchOps
apply	include/petsc-private/matimpl.h	/^  PetscErrorCode (*apply)(MatCoarsen);$/;"	m	struct:_MatCoarsenOps
apply	include/petsc-private/matimpl.h	/^  PetscErrorCode (*apply)(MatPartitioning,IS*);$/;"	m	struct:_MatPartitioningOps
apply	include/petsc-private/pcimpl.h	/^  PetscErrorCode (*apply)(PC,Vec,Vec);$/;"	m	struct:_PCOps
applyBA	include/petsc-private/pcimpl.h	/^  PetscErrorCode (*applyBA)(PC,PCSide,Vec,Vec,Vec);$/;"	m	struct:_PCOps
applyBAtranspose	include/petsc-private/pcimpl.h	/^  PetscErrorCode (*applyBAtranspose)(PC,PetscInt,Vec,Vec,Vec);$/;"	m	struct:_PCOps
applyrichardson	include/petsc-private/pcimpl.h	/^  PetscErrorCode (*applyrichardson)(PC,Vec,Vec,Vec,PetscReal,PetscReal,PetscReal,PetscInt,PetscBool ,PetscInt*,PCRichardsonConvergedReason*);$/;"	m	struct:_PCOps
applysymmetricleft	include/petsc-private/pcimpl.h	/^  PetscErrorCode (*applysymmetricleft)(PC,Vec,Vec);$/;"	m	struct:_PCOps
applysymmetricright	include/petsc-private/pcimpl.h	/^  PetscErrorCode (*applysymmetricright)(PC,Vec,Vec);$/;"	m	struct:_PCOps
applytranspose	include/petsc-private/pcimpl.h	/^  PetscErrorCode (*applytranspose)(PC,Vec,Vec);$/;"	m	struct:_PCOps
arch	bin/TOPSInstaller.py	/^           arch = enterbox("Name of this configuration",title)$/;"	v
arch	bin/TOPSInstaller.py	/^        arch = ''$/;"	v
arch	config/BuildSystem/config/package.py	/^  arch = property(getArch, setArch, doc = 'The architecture identifier')$/;"	v	class:Package
arch	config/BuildSystem/config/packages/PETSc.py	/^  arch = property(getArch, doc = 'The PETSc architecture')$/;"	v	class:Configure
arch	config/PETSc/petsc.py	/^  arch = property(getArch, doc = 'The PETSc architecture')$/;"	v	class:Configure
areCoPlanar	src/dm/impls/mesh/examples/tutorials/Coarsener.h	/^bool areCoPlanar(Obj<ALE::Mesh>& mesh, ALE::Mesh::point_type tri1, ALE::Mesh::point_type tri2)$/;"	f	namespace:ALE::Coarsener
argDB	config/BuildSystem/args.py	/^  argDB = property(getArgDB, setArgDB, doc = 'The RDict argument database')$/;"	v	class:ArgumentProcessor
argDB	config/BuildSystem/config/compile/C.py	/^  argDB = property(args.ArgumentProcessor.getArgDB, setArgDB, doc = 'The RDict argument database')$/;"	v	class:DynamicLinker
argDB	config/BuildSystem/config/compile/C.py	/^  argDB = property(args.ArgumentProcessor.getArgDB, setArgDB, doc = 'The RDict argument database')$/;"	v	class:Linker
argDB	config/BuildSystem/config/compile/C.py	/^  argDB = property(args.ArgumentProcessor.getArgDB, setArgDB, doc = 'The RDict argument database')$/;"	v	class:SharedLinker
argDB	config/BuildSystem/config/compile/Cxx.py	/^  argDB = property(args.ArgumentProcessor.getArgDB, setArgDB, doc = 'The RDict argument database')$/;"	v	class:Linker
argDB	config/BuildSystem/config/compile/Cxx.py	/^  argDB = property(args.ArgumentProcessor.getArgDB, setArgDB, doc = 'The RDict argument database')$/;"	v	class:SharedLinker
argDB	config/BuildSystem/config/compile/FC.py	/^  argDB = property(args.ArgumentProcessor.getArgDB, setArgDB, doc = 'The RDict argument database')$/;"	v	class:Linker
argDB	config/BuildSystem/config/compile/processor.py	/^  argDB = property(args.ArgumentProcessor.getArgDB, setArgDB, doc = 'The RDict argument database')$/;"	v	class:Processor
argDB	config/BuildSystem/script.py	/^  argDB = property(args.ArgumentProcessor.getArgDB, setArgDB, doc = 'The RDict argument database')$/;"	v	class:LanguageProcessor
argDB	src/dm/impls/mesh/examples/tests/xsieveTest.hh	/^      ALE::ArgDB argDB;$/;"	m	struct:ALE::Test::XSieveTester
argparse	config/builder2.py	/^  import argparse$/;"	i
args	bin/TOPSGenerator.py	/^        args = []$/;"	v
args	bin/TOPSInstaller.py	/^        args = []$/;"	v
args	bin/TOPSInstaller.py	/^        args = multenterbox("Configure options you have selected.", title, None, args)$/;"	v
args	config/BuildSystem/config/compile/C.py	/^import args$/;"	i
args	config/BuildSystem/config/compile/CUDA.py	/^import args$/;"	i
args	config/BuildSystem/config/compile/Cxx.py	/^import args$/;"	i
args	config/BuildSystem/config/compile/FC.py	/^import args$/;"	i
args	config/BuildSystem/config/compile/processor.py	/^import args$/;"	i
args	config/BuildSystem/logger.py	/^import args$/;"	i
args	config/BuildSystem/script.py	/^import args$/;"	i
args	config/builder2.py	/^  args = parser.parse_args()$/;"	v
args	include/petsc-private/threadcommimpl.h	/^  void              *args[PETSC_KERNEL_NARGS_MAX]; \/* Array of void* to hold the arguments *\/$/;"	m	struct:_p_PetscThreadCommJobCtx
args	include/web/AMS.py	/^args   = {}  # Arguments to each remote call$/;"	v
array	include/petsc-private/vecimpl.h	/^  PetscScalar   *array;                 \/* array to hold stashed values *\/$/;"	m	struct:__anon24
array	include/petscmat.h	/^  PetscCDIntNd **array;  \/* Array of lists *\/$/;"	m	struct:_PetscCoarsenData
array	include/petscmat.h	/^  struct _PetscCDIntNd *array;$/;"	m	struct:_PetscCDArrNd	typeref:struct:_PetscCDArrNd::_PetscCDIntNd
array	include/sieve/ALE_containers.hh	/^    array()             : std::vector<Element_, ALE_ALLOCATOR<Element_> >(){};$/;"	f	class:ALE::array
array	include/sieve/ALE_containers.hh	/^    array(int32_t size) : std::vector<Element_, ALE_ALLOCATOR<Element_> >(size){};$/;"	f	class:ALE::array
array	include/sieve/ALE_containers.hh	/^  class array : public std::vector<Element_, ALE_ALLOCATOR<Element_> > {$/;"	c	namespace:ALE
array	include/sieve/ISieve.hh	/^      value_type        *array;$/;"	m	class:ALE::ISieveVisitor::RestrictVecVisitor
array	include/sieve/ISieve.hh	/^      value_type        *array;$/;"	m	class:ALE::ISieveVisitor::UpdateVecVisitor
array_gotten	include/petsc-private/vecimpl.h	/^  PetscBool              array_gotten;$/;"	m	struct:_p_Vec
arrayghostedin	include/petsc-private/dmdaimpl.h	/^  void                  *arrayghostedin[DMDA_MAX_WORK_ARRAYS],*arrayghostedout[DMDA_MAX_WORK_ARRAYS];$/;"	m	struct:__anon23
arrayghostedout	include/petsc-private/dmdaimpl.h	/^  void                  *arrayghostedin[DMDA_MAX_WORK_ARRAYS],*arrayghostedout[DMDA_MAX_WORK_ARRAYS];$/;"	m	struct:__anon23
arrayin	include/petsc-private/dmdaimpl.h	/^  void                  *arrayin[DMDA_MAX_WORK_ARRAYS],*arrayout[DMDA_MAX_WORK_ARRAYS];$/;"	m	struct:__anon23
arraylength	include/petscoptions.h	/^  size_t            arraylength;   \/* number of entries in data in the case that it is an array (of PetscInt etc) *\/$/;"	m	struct:_n_PetscOptions
arrayout	include/petsc-private/dmdaimpl.h	/^  void                  *arrayin[DMDA_MAX_WORK_ARRAYS],*arrayout[DMDA_MAX_WORK_ARRAYS];$/;"	m	struct:__anon23
arrow	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*arrow)(PetscDraw,PetscReal,PetscReal,PetscReal,PetscReal,int);$/;"	m	struct:_PetscDrawOps
arrow	include/sieve/ALE_containers.hh	/^      type arrow(const arrow_type& a) { return type(a.target, a.source, a.color);};$/;"	f	struct:ALE::Arrow::flip
arrow	include/sieve/ISieve.hh	/^      other arrow(const SimpleArrow& a) {return type(a.target, a.source);};$/;"	f	struct:ALE::SimpleArrow::flip
arrow	include/sieve/LabelSifter.hh	/^          virtual const arrow_type&  arrow()  const {return *(this->_itor);};$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence::iterator
arrow	include/sieve/LabelSifter.hh	/^          virtual const arrow_type&  arrow()  const {return *(this->_itor);};$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence::reverse_iterator
arrow	include/sieve/LabelSifter.hh	/^        type arrow(const arrow_type& a) { return type(a.target, a.source);};$/;"	f	struct:ALE::NewSifterDef::Arrow::flip
arrow	include/sieve/Sifter.hh	/^          virtual const arrow_type&  arrow()  const {return *(this->_itor);};$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence::iterator
arrow	include/sieve/Sifter.hh	/^          virtual const arrow_type&  arrow()  const {return *(this->_itor);};$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence::reverse_iterator
arrow	include/sieve/Sifter.hh	/^        type arrow(const arrow_type& a) { return type(a.target, a.source, a.color);};$/;"	f	struct:ALE::SifterDef::Arrow::flip
arrowInd	include/sieve/LabelSifter.hh	/^      typedef typename arrow_container_type::traits::sourceTargetTag                 arrowInd;$/;"	t	struct:ALE::LabelSifter::__anon7
arrowInd	include/sieve/Sieve.hh	/^        typedef typename baseType::traits::arrowInd             arrowInd;$/;"	t	struct:ALE::Sieve::__anon9
arrowInd	include/sieve/Sifter.hh	/^      typedef typename arrow_container_type::traits::sourceTargetTag                 arrowInd;$/;"	t	struct:ALE::ASifter::__anon2
arrowSequence	include/sieve/LabelSifter.hh	/^      arrowSequence;$/;"	t	struct:ALE::LabelSifter::__anon7
arrowSequence	include/sieve/Sieve.hh	/^        typedef typename baseType::traits::arrowSequence        arrowSequence;$/;"	t	struct:ALE::Sieve::__anon9
arrowSequence	include/sieve/Sifter.hh	/^      arrowSequence;$/;"	t	struct:ALE::ASifter::__anon2
arrow_container_type	include/sieve/LabelSifter.hh	/^      typedef NewSifterDef::ArrowContainer<Source_, Target_, Alloc_>                 arrow_container_type;$/;"	t	struct:ALE::LabelSifter::__anon7
arrow_container_type	include/sieve/Sieve.hh	/^        typedef typename baseType::traits::arrow_container_type arrow_container_type;$/;"	t	struct:ALE::Sieve::__anon9
arrow_container_type	include/sieve/Sifter.hh	/^      typedef SifterDef::ArrowContainer<Source_, Target_, Color_, colorMultiplicity, SupportCompare_> arrow_container_type;$/;"	t	struct:ALE::ASifter::__anon2
arrow_section_type	include/sieve/CartesianSieve.hh	/^    typedef UniformSection<MinimalArrow<point_type, point_type>, int> arrow_section_type;$/;"	t	class:ALE::CartesianBundle
arrow_section_type	include/sieve/Mesh.hh	/^    typedef ArrowSection_                                             arrow_section_type;$/;"	t	class:ALE::Bundle
arrow_section_type	include/sieve/Mesh.hh	/^    typedef ArrowSection_                                             arrow_section_type;$/;"	t	class:ALE::IBundle
arrow_section_type	include/sieve/Mesh.hh	/^    typedef typename base_type::arrow_section_type    arrow_section_type;$/;"	t	class:ALE::Mesh
arrow_section_type	include/sieve/SieveAlgorithms.hh	/^    typedef typename bundle_type::arrow_section_type arrow_section_type;$/;"	t	class:ALE::SieveAlg
arrow_section_type	include/sieve/SieveBuilder.hh	/^    typedef typename bundle_type::arrow_section_type     arrow_section_type;$/;"	t	class:ALE::SieveBuilder
arrow_sections_type	include/sieve/CartesianSieve.hh	/^    typedef std::map<std::string, Obj<arrow_section_type> >           arrow_sections_type;$/;"	t	class:ALE::CartesianBundle
arrow_sections_type	include/sieve/Mesh.hh	/^    typedef std::map<std::string, Obj<arrow_section_type> >           arrow_sections_type;$/;"	t	class:ALE::Bundle
arrow_sections_type	include/sieve/Mesh.hh	/^    typedef std::map<std::string, Obj<arrow_section_type> >           arrow_sections_type;$/;"	t	class:ALE::IBundle
arrow_type	include/sieve/ALE_containers.hh	/^    typedef Arrow   arrow_type;$/;"	t	struct:ALE::Arrow
arrow_type	include/sieve/ISieve.hh	/^      typedef typename Sieve::arrow_type              arrow_type;$/;"	t	class:ALE::ISieveVisitor::MeshNConeRetriever
arrow_type	include/sieve/ISieve.hh	/^      typedef typename Sieve::arrow_type              arrow_type;$/;"	t	class:ALE::ISieveVisitor::NConeRetriever
arrow_type	include/sieve/ISieve.hh	/^      typedef typename Sieve::arrow_type arrow_type;$/;"	t	class:ALE::ISieveVisitor::ArrowRetriever
arrow_type	include/sieve/ISieve.hh	/^      typedef typename Sieve::arrow_type arrow_type;$/;"	t	class:ALE::ISieveVisitor::FilteredPointRetriever
arrow_type	include/sieve/ISieve.hh	/^      typedef typename Sieve::arrow_type arrow_type;$/;"	t	class:ALE::ISieveVisitor::PointRetriever
arrow_type	include/sieve/ISieve.hh	/^    typedef SimpleArrow<point_type,point_type> arrow_type;$/;"	t	class:ALE::IFSieve
arrow_type	include/sieve/LabelSifter.hh	/^      typedef Arrow   arrow_type;$/;"	t	struct:ALE::NewSifterDef::Arrow
arrow_type	include/sieve/LabelSifter.hh	/^      typedef Arrow<Source_,Target_>           arrow_type;$/;"	t	struct:ALE::NewSifterDef::ArrowContainerTraits
arrow_type	include/sieve/LabelSifter.hh	/^      typedef typename arrow_container_type::traits::arrow_type                      arrow_type;$/;"	t	struct:ALE::LabelSifter::__anon7
arrow_type	include/sieve/LabelSifter.hh	/^      typedef typename traits::arrow_type                                   arrow_type;$/;"	t	struct:ALE::NewSifterDef::ArrowContainer
arrow_type	include/sieve/Sections.hh	/^      typedef typename section_type::point_type arrow_type;$/;"	t	class:ALE::New::ArrowSection
arrow_type	include/sieve/Selection.hh	/^      typedef typename Sieve::arrow_type arrow_type;$/;"	t	class:ALE::Selection::FaceVisitor
arrow_type	include/sieve/Sieve.hh	/^        typedef typename baseType::traits::arrow_type           arrow_type;$/;"	t	struct:ALE::Sieve::__anon9
arrow_type	include/sieve/SieveAlgorithms.hh	/^    typedef MinimalArrow<point_type, point_type>     arrow_type;$/;"	t	class:ALE::SieveAlg
arrow_type	include/sieve/Sifter.hh	/^      typedef Arrow   arrow_type;$/;"	t	struct:ALE::SifterDef::Arrow
arrow_type	include/sieve/Sifter.hh	/^      typedef Arrow<Source_,Target_,Color_>    arrow_type;$/;"	t	struct:ALE::SifterDef::ArrowContainerTraits
arrow_type	include/sieve/Sifter.hh	/^      typedef typename arrow_container_type::traits::arrow_type                      arrow_type;$/;"	t	struct:ALE::ASifter::__anon2
arrow_type	include/sieve/Sifter.hh	/^      typedef typename traits::arrow_type                                   arrow_type;$/;"	t	struct:ALE::SifterDef::ArrowContainer
arrow_type	include/sieve/Sifter.hh	/^      typedef typename traits::arrow_type                         arrow_type;$/;"	t	struct:ALE::SifterDef::ArrowContainer
arrow_type	src/dm/impls/mesh/examples/tests/operator1.cxx	/^typedef ALE::MinimalArrow<ALE::Mesh::point_type, ALE::Mesh::point_type> arrow_type;$/;"	t	file:
arrows	include/sieve/ISieve.hh	/^      arrow_type          arrows[size];$/;"	m	class:ALE::ISieveVisitor::ArrowRetriever
arrows	include/sieve/LabelSifter.hh	/^    arrows(const typename traits::source_type& s) {$/;"	f	class:ALE::LabelSifter
arrows	include/sieve/LabelSifter.hh	/^    arrows(const typename traits::source_type& s, const typename traits::target_type& t) {$/;"	f	class:ALE::LabelSifter
arrows	include/sieve/Sifter.hh	/^    arrows(const typename traits::source_type& s) {$/;"	f	class:ALE::ASifter
arrows	include/sieve/Sifter.hh	/^    arrows(const typename traits::source_type& s, const typename traits::target_type& t) {$/;"	f	class:ALE::ASifter
assemble	include/sieve/Overlap.hh	/^  void assemble() {$/;"	f	class:PETSc::Overlap
assemble	include/sieve/Sifter.hh	/^    void assemble() {};$/;"	f	class:ALE::ASifter
assembleFast	include/sieve/Overlap.hh	/^  void assembleFast() {$/;"	f	class:PETSc::Overlap
assembleFlexible	include/sieve/Overlap.hh	/^  void assembleFlexible() {$/;"	f	class:PETSc::Overlap
assemblePoints	include/sieve/Overlap.hh	/^  void assemblePoints() {$/;"	f	class:PETSc::Overlap
assemblePoints	include/sieve/Sifter.hh	/^    void assemblePoints() {};$/;"	f	class:ALE::ASifter
assembled	include/petsc-private/matimpl.h	/^  PetscBool              assembled;        \/* is the matrix assembled? *\/$/;"	m	struct:_p_Mat
assemblies	include/petscmat.h	/^  PetscLogDouble assemblies;                         \/* number of matrix assemblies called *\/$/;"	m	struct:__anon93
assemblyEvent	src/dm/impls/mesh/examples/tests/operator1.cxx	/^  PetscLogEvent assemblyEvent;$/;"	m	struct:__anon19	file:
assemblybegin	include/petsc-private/matimpl.h	/^  PetscErrorCode (*assemblybegin)(Mat,MatAssemblyType);$/;"	m	struct:_MatOps
assemblybegin	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*assemblybegin)(Vec);                \/* start global assembly *\/$/;"	m	struct:_VecOps
assemblyend	include/petsc-private/matimpl.h	/^  PetscErrorCode (*assemblyend)(Mat,MatAssemblyType);$/;"	m	struct:_MatOps
assemblyend	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*assemblyend)(Vec);                  \/* end global assembly *\/$/;"	m	struct:_VecOps
assertNull	include/sieve/ALE_mem.hh	/^    void assertNull(bool flag) const { if(this->isNull() != flag){ throw(Exception("Null assertion failed"));}};$/;"	f	class:ALE::Obj
atexit	config/BuildSystem/RDict.py	/^    import atexit$/;"	i
atexit	config/BuildSystem/build/framework.py	/^import atexit$/;"	i
atexit	config/BuildSystem/regression/testCase.py	/^      import atexit$/;"	i
atlas	include/petscdmmesh.hh	/^  Atlas&                 atlas;$/;"	m	class:AdjVisitor
atlasDof	include/petsc-private/isimpl.h	/^  PetscInt                     *atlasDof;     \/* Describes layout of storage, point --> # of values *\/$/;"	m	struct:_p_PetscSection
atlasLayout	include/petsc-private/isimpl.h	/^  struct _n_PetscUniformSection atlasLayout;  \/* Layout for the atlas *\/$/;"	m	struct:_p_PetscSection	typeref:struct:_p_PetscSection::_n_PetscUniformSection
atlasOff	include/petsc-private/isimpl.h	/^  PetscInt                     *atlasOff;     \/* Describes layout of storage, point --> offset into storage *\/$/;"	m	struct:_p_PetscSection
atlas_alloc_type	include/sieve/Field.hh	/^    typedef typename alloc_type::template rebind<atlas_type>::other                               atlas_alloc_type;$/;"	t	class:ALE::NewUniformSection
atlas_alloc_type	include/sieve/Field.hh	/^    typedef typename alloc_type::template rebind<atlas_type>::other                               atlas_alloc_type;$/;"	t	class:ALE::UniformSection
atlas_alloc_type	include/sieve/Field.hh	/^    typedef typename alloc_type::template rebind<atlas_type>::other atlas_alloc_type;$/;"	t	class:ALE::FEMSection
atlas_alloc_type	include/sieve/Field.hh	/^    typedef typename alloc_type::template rebind<atlas_type>::other atlas_alloc_type;$/;"	t	class:ALE::GeneralSection
atlas_alloc_type	include/sieve/Field.hh	/^    typedef typename alloc_type::template rebind<atlas_type>::other atlas_alloc_type;$/;"	t	class:ALE::Section
atlas_alloc_type	include/sieve/IField.hh	/^    typedef typename alloc_type::template rebind<atlas_type>::other atlas_alloc_type;$/;"	t	class:ALE::IUniformSection
atlas_alloc_type	include/sieve/IField.hh	/^    typedef typename base::atlas_alloc_type atlas_alloc_type;$/;"	t	class:ALE::IGeneralSection
atlas_alloc_type	include/sieve/IField.hh	/^    typedef typename base::atlas_alloc_type atlas_alloc_type;$/;"	t	class:ALE::ISection
atlas_alloc_type	include/sieve/Sections.hh	/^    typedef typename alloc_type::template rebind<atlas_type>::other atlas_alloc_type;$/;"	t	class:ALE::ConeSection
atlas_alloc_type	include/sieve/Sections.hh	/^    typedef typename alloc_type::template rebind<atlas_type>::other atlas_alloc_type;$/;"	t	class:ALE::ConeSectionV
atlas_alloc_type	include/sieve/Sections.hh	/^    typedef typename alloc_type::template rebind<atlas_type>::other atlas_alloc_type;$/;"	t	class:ALE::ConeSizeSection
atlas_alloc_type	include/sieve/Sections.hh	/^    typedef typename alloc_type::template rebind<atlas_type>::other atlas_alloc_type;$/;"	t	class:ALE::ConeSizeSectionV
atlas_alloc_type	include/sieve/Sections.hh	/^    typedef typename alloc_type::template rebind<atlas_type>::other atlas_alloc_type;$/;"	t	class:ALE::LabelSection
atlas_alloc_type	include/sieve/Sections.hh	/^    typedef typename alloc_type::template rebind<atlas_type>::other atlas_alloc_type;$/;"	t	class:ALE::OrientedConeSectionV
atlas_ptr	include/sieve/Field.hh	/^    typedef typename atlas_alloc_type::pointer                                                    atlas_ptr;$/;"	t	class:ALE::NewUniformSection
atlas_ptr	include/sieve/Field.hh	/^    typedef typename atlas_alloc_type::pointer                                                    atlas_ptr;$/;"	t	class:ALE::UniformSection
atlas_ptr	include/sieve/Field.hh	/^    typedef typename atlas_alloc_type::pointer                      atlas_ptr;$/;"	t	class:ALE::FEMSection
atlas_ptr	include/sieve/Field.hh	/^    typedef typename atlas_alloc_type::pointer                      atlas_ptr;$/;"	t	class:ALE::GeneralSection
atlas_ptr	include/sieve/Field.hh	/^    typedef typename atlas_alloc_type::pointer                      atlas_ptr;$/;"	t	class:ALE::Section
atlas_ptr	include/sieve/IField.hh	/^    typedef typename atlas_alloc_type::pointer                      atlas_ptr;$/;"	t	class:ALE::IUniformSection
atlas_ptr	include/sieve/IField.hh	/^    typedef typename base::atlas_ptr        atlas_ptr;$/;"	t	class:ALE::IGeneralSection
atlas_ptr	include/sieve/IField.hh	/^    typedef typename base::atlas_ptr        atlas_ptr;$/;"	t	class:ALE::ISection
atlas_ptr	include/sieve/Sections.hh	/^    typedef typename atlas_alloc_type::pointer                      atlas_ptr;$/;"	t	class:ALE::ConeSection
atlas_ptr	include/sieve/Sections.hh	/^    typedef typename atlas_alloc_type::pointer                      atlas_ptr;$/;"	t	class:ALE::ConeSectionV
atlas_ptr	include/sieve/Sections.hh	/^    typedef typename atlas_alloc_type::pointer                      atlas_ptr;$/;"	t	class:ALE::ConeSizeSection
atlas_ptr	include/sieve/Sections.hh	/^    typedef typename atlas_alloc_type::pointer                      atlas_ptr;$/;"	t	class:ALE::ConeSizeSectionV
atlas_ptr	include/sieve/Sections.hh	/^    typedef typename atlas_alloc_type::pointer                      atlas_ptr;$/;"	t	class:ALE::LabelSection
atlas_ptr	include/sieve/Sections.hh	/^    typedef typename atlas_alloc_type::pointer                      atlas_ptr;$/;"	t	class:ALE::OrientedConeSectionV
atlas_type	include/sieve/Field.hh	/^    typedef Atlas_                                                  atlas_type;$/;"	t	class:ALE::FEMSection
atlas_type	include/sieve/Field.hh	/^    typedef Atlas_                                                  atlas_type;$/;"	t	class:ALE::GeneralSection
atlas_type	include/sieve/Field.hh	/^    typedef Atlas_                                                  atlas_type;$/;"	t	class:ALE::Section
atlas_type	include/sieve/Field.hh	/^    typedef ConstantSection<point_type, int, point_alloc_type> atlas_type;$/;"	t	class:ALE::UniformSection
atlas_type	include/sieve/Field.hh	/^    typedef FauxConstantSection<point_type, int, point_alloc_type>                                atlas_type;$/;"	t	class:ALE::NewUniformSection
atlas_type	include/sieve/IField.hh	/^    typedef IConstantSection<point_type, int, point_alloc_type>     atlas_type;$/;"	t	class:ALE::IUniformSection
atlas_type	include/sieve/IField.hh	/^    typedef typename base::atlas_type       atlas_type;$/;"	t	class:ALE::IGeneralSection
atlas_type	include/sieve/IField.hh	/^    typedef typename base::atlas_type       atlas_type;$/;"	t	class:ALE::ISection
atlas_type	include/sieve/INumbering.hh	/^    typedef typename base_type::atlas_type             atlas_type;$/;"	t	class:ALE::IGlobalOrder
atlas_type	include/sieve/INumbering.hh	/^    typedef typename base_type::atlas_type             atlas_type;$/;"	t	class:ALE::INumbering
atlas_type	include/sieve/Numbering.hh	/^    typedef typename base_type::atlas_type atlas_type;$/;"	t	class:ALE::GlobalOrder
atlas_type	include/sieve/Numbering.hh	/^    typedef typename base_type::atlas_type atlas_type;$/;"	t	class:ALE::Numbering
atlas_type	include/sieve/Sections.hh	/^    typedef Atlas_                              atlas_type;$/;"	t	class:ALE::LabelSection
atlas_type	include/sieve/Sections.hh	/^    typedef BaseSection<sieve_type, alloc_type> atlas_type;$/;"	t	class:ALE::ConeSizeSection
atlas_type	include/sieve/Sections.hh	/^    typedef BaseSectionV<sieve_type, alloc_type> atlas_type;$/;"	t	class:ALE::ConeSizeSectionV
atlas_type	include/sieve/Sections.hh	/^    typedef ConeSizeSection<sieve_type, alloc_type> atlas_type;$/;"	t	class:ALE::ConeSection
atlas_type	include/sieve/Sections.hh	/^    typedef ConeSizeSectionV<sieve_type, alloc_type> atlas_type;$/;"	t	class:ALE::ConeSectionV
atlas_type	include/sieve/Sections.hh	/^    typedef ConeSizeSectionV<sieve_type, int_alloc_type> atlas_type;$/;"	t	class:ALE::OrientedConeSectionV
atlas_type	src/dm/impls/mesh/examples/tests/section1-old.cxx	/^typedef section_type::atlas_type  atlas_type;$/;"	t	file:
atol	include/petsc-private/linesearchimpl.h	/^  PetscReal           atol;$/;"	m	struct:_p_LineSearch
atol	include/petsc-private/tsimpl.h	/^  PetscReal atol,rtol;          \/* Relative and absolute tolerance for local truncation error *\/$/;"	m	struct:_p_TS
axpby	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*axpby)(Vec,PetscScalar,PetscScalar,Vec);      \/* y = alpha * x + beta * y*\/$/;"	m	struct:_VecOps
axpbypcz	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*axpbypcz)(Vec,PetscScalar,PetscScalar,PetscScalar,Vec,Vec);   \/* z = alpha * x + beta *y + gamma *z*\/$/;"	m	struct:_VecOps
axpy	include/petsc-private/matimpl.h	/^  PetscErrorCode (*axpy)(Mat,PetscScalar,Mat,MatStructure);$/;"	m	struct:_MatOps
axpy	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*axpy)(Vec,PetscScalar,Vec);                   \/* y = y + alpha * x *\/$/;"	m	struct:_VecOps
axpy	include/sieve/Field.hh	/^    void axpy(const value_type alpha, const Obj<FEMSection>& x) {$/;"	f	class:ALE::FEMSection
axpy	include/sieve/Field.hh	/^    void axpy(const value_type alpha, const Obj<OtherSection>& x) {$/;"	f	class:ALE::GeneralSection
aypx	include/petsc-private/matimpl.h	/^  PetscErrorCode (*aypx)(Mat,PetscScalar,Mat,MatStructure);$/;"	m	struct:_MatOps
aypx	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*aypx)(Vec,PetscScalar,Vec);                   \/* y = x + alpha * y *\/$/;"	m	struct:_VecOps
b	include/petsc-private/meshimpl.h	/^  ALE::Obj<PETSC_MESH_TYPE> b;$/;"	m	struct:_p_SectionInt
b	include/petsc-private/meshimpl.h	/^  ALE::Obj<PETSC_MESH_TYPE> b;$/;"	m	struct:_p_SectionReal
b	include/petscmath.h	/^struct petsc_mpiu_2int {PetscInt a,b;};$/;"	m	struct:petsc_mpiu_2int
b	include/petscmath.h	/^struct petsc_mpiu_2scalar {PetscScalar a,b;};$/;"	m	struct:petsc_mpiu_2scalar
backupRemoveDirectory	config/BuildSystem/logger.py	/^backupRemoveDirectory = ''$/;"	v
backwardsolve	include/petsc-private/matimpl.h	/^  PetscErrorCode (*backwardsolve)(Mat,Vec,Vec);$/;"	m	struct:_MatOps
bagcomm	include/petsc-private/bagimpl.h	/^  MPI_Comm     bagcomm;$/;"	m	struct:_n_PetscBag
baghelp	include/petsc-private/bagimpl.h	/^  char         baghelp[PETSC_BAG_HELP_LENGTH];$/;"	m	struct:_n_PetscBag
bagitems	include/petsc-private/bagimpl.h	/^  PetscBagItem bagitems;$/;"	m	struct:_n_PetscBag
bagname	include/petsc-private/bagimpl.h	/^  char         bagname[PETSC_BAG_NAME_LENGTH];$/;"	m	struct:_n_PetscBag
bagprefix	include/petsc-private/bagimpl.h	/^  char         *bagprefix;$/;"	m	struct:_n_PetscBag
bagsize	include/petsc-private/bagimpl.h	/^  PetscInt     bagsize;$/;"	m	struct:_n_PetscBag
barrier	include/petsc-private/threadcommimpl.h	/^  PetscErrorCode (*barrier)(PetscThreadComm);$/;"	m	struct:_PetscThreadCommOps
barrierBegin	include/petsclog.hh	/^    void barrierBegin(PetscObject o1 = NULL, PetscObject o2 = NULL, PetscObject o3 = NULL, PetscObject o4 = NULL, MPI_Comm comm = MPI_COMM_NULL) {$/;"	f	class:PETSc::LogEvent
barrierEnd	include/petsclog.hh	/^    void barrierEnd(PetscObject o1 = NULL, PetscObject o2 = NULL, PetscObject o3 = NULL, PetscObject o4 = NULL, MPI_Comm comm = MPI_COMM_NULL) {$/;"	f	class:PETSc::LogEvent
base	config/BuildSystem/build/builder.py	/^import base$/;"	i
base	config/BuildSystem/build/fileset.py	/^import base$/;"	i
base	config/BuildSystem/build/framework.py	/^import base$/;"	i
base	config/BuildSystem/build/processor.py	/^import base$/;"	i
base	config/BuildSystem/build/templates/Compile.py	/^import base$/;"	i
base	config/BuildSystem/build/templates/SIDL.py	/^import base$/;"	i
base	config/BuildSystem/build/templates/usingC.py	/^    import config.base$/;"	i
base	config/BuildSystem/build/templates/usingC.py	/^import base$/;"	i
base	config/BuildSystem/build/templates/usingCxx.py	/^    import config.base$/;"	i
base	config/BuildSystem/build/templates/usingCxx.py	/^import base$/;"	i
base	config/BuildSystem/build/templates/usingPython.py	/^import base$/;"	i
base	config/BuildSystem/build/templates/usingSIDL.py	/^import base$/;"	i
base	config/BuildSystem/build/transform.py	/^import base$/;"	i
base	config/BuildSystem/config/ase.py	/^import config.base$/;"	i
base	config/BuildSystem/config/atomics.py	/^import config.base$/;"	i
base	config/BuildSystem/config/autoconf.py	/^import config.base$/;"	i
base	config/BuildSystem/config/compilerFlags.py	/^import config.base$/;"	i
base	config/BuildSystem/config/compilerOptions.py	/^import config.base$/;"	i
base	config/BuildSystem/config/compilers.py	/^import config.base$/;"	i
base	config/BuildSystem/config/framework.py	/^import config.base$/;"	i
base	config/BuildSystem/config/functions.py	/^import config.base$/;"	i
base	config/BuildSystem/config/headers.py	/^import config.base$/;"	i
base	config/BuildSystem/config/libraries.py	/^import config.base$/;"	i
base	config/BuildSystem/config/package.py	/^import config.base$/;"	i
base	config/BuildSystem/config/packages/BlasLapack.py	/^import config.base$/;"	i
base	config/BuildSystem/config/packages/CHOLMOD.py	/^import config.base$/;"	i
base	config/BuildSystem/config/packages/MPI.py	/^import config.base$/;"	i
base	config/BuildSystem/config/packages/PETSc.py	/^import config.base$/;"	i
base	config/BuildSystem/config/packages/UMFPACK.py	/^import config.base$/;"	i
base	config/BuildSystem/config/packages/exodusii.py	/^import config.base$/;"	i
base	config/BuildSystem/config/programs.py	/^import config.base$/;"	i
base	config/BuildSystem/config/python.py	/^import config.base$/;"	i
base	config/BuildSystem/config/regression/frameworkTest.py	/^    import config.base$/;"	i
base	config/BuildSystem/config/regression/shellTest.py	/^    import config.base$/;"	i
base	config/BuildSystem/config/setCompilers.py	/^import config.base$/;"	i
base	config/BuildSystem/config/sourceControl.py	/^import config.base$/;"	i
base	config/BuildSystem/config/types.py	/^import config.base$/;"	i
base	config/BuildSystem/configure.py	/^import config.base$/;"	i
base	config/BuildSystem/retrieval.py	/^import config.base$/;"	i
base	config/PETSc/Configure.py	/^import config.base$/;"	i
base	config/PETSc/package.py	/^import config.base$/;"	i
base	config/PETSc/packages/Triangle.py	/^    import config.base$/;"	i
base	config/PETSc/packages/tetgen.py	/^    import config.base$/;"	i
base	config/PETSc/petsc.py	/^import config.base$/;"	i
base	config/PETSc/utilities/CHUD.py	/^import config.base$/;"	i
base	config/PETSc/utilities/Etags.py	/^import config.base$/;"	i
base	config/PETSc/utilities/FPTrap.py	/^import config.base$/;"	i
base	config/PETSc/utilities/Regression.py	/^import config.base$/;"	i
base	config/PETSc/utilities/arch.py	/^import config.base$/;"	i
base	config/PETSc/utilities/bmakeDir.py	/^import config.base$/;"	i
base	config/PETSc/utilities/cacheDetails.py	/^import config.base$/;"	i
base	config/PETSc/utilities/dataFilesPath.py	/^import config.base$/;"	i
base	config/PETSc/utilities/debuggers.py	/^import config.base$/;"	i
base	config/PETSc/utilities/debugging.py	/^import config.base$/;"	i
base	config/PETSc/utilities/fortranCPP.py	/^import config.base$/;"	i
base	config/PETSc/utilities/fortranCommandLine.py	/^import config.base$/;"	i
base	config/PETSc/utilities/getResidentSetSize.py	/^import config.base$/;"	i
base	config/PETSc/utilities/languages.py	/^import config.base$/;"	i
base	config/PETSc/utilities/libraryOptions.py	/^import config.base$/;"	i
base	config/PETSc/utilities/memAlign.py	/^import config.base$/;"	i
base	config/PETSc/utilities/missing.py	/^import config.base$/;"	i
base	config/PETSc/utilities/petscdir.py	/^import config.base$/;"	i
base	config/PETSc/utilities/scalarTypes.py	/^import config.base$/;"	i
base	config/PETSc/utilities/sharedLibraries.py	/^import config.base$/;"	i
base	config/PETSc/utilities/timer.py	/^import config.base$/;"	i
base	config/configure.py	/^  import config.base$/;"	i
base	include/petsc-private/dmdaimpl.h	/^  PetscInt              base;                  \/* global number of 1st local node, includes the * w term *\/$/;"	m	struct:__anon23
base	include/sieve/CartesianSieve.hh	/^    Obj<baseSequence> base() {$/;"	f	class:ALE::CartesianSieve
base	include/sieve/Field.hh	/^    const Obj<baseSequence>& base() {return this->_points;}$/;"	f	class:ALE::DiscreteSieve
base	include/sieve/IField.hh	/^    typedef GeneralSection<Point_, Value_, Alloc_, IUniformSection<Point_, Point, 1, typename Alloc_::template rebind<Point>::other>, ISection<Point_, int, typename Alloc_::template rebind<int>::other> > base;$/;"	t	class:ALE::IGeneralSection
base	include/sieve/IField.hh	/^    typedef Section<Point_, Value_, Alloc_, IUniformSection<Point_, Point, 1, typename Alloc_::template rebind<Point>::other> > base;$/;"	t	class:ALE::ISection
base	include/sieve/ISieve.hh	/^    void base(Visitor& v) const {$/;"	f	class:ALE::IFSieve
base	include/sieve/ISieve.hh	/^    void base(const Visitor& v) const {$/;"	f	class:ALE::IFSieve
base	include/sieve/Sifter.hh	/^    Obj<typename traits::baseSequence> base() {$/;"	f	class:ALE::ASifter
baseBegin	include/sieve/Overlap.hh	/^  typename baseSequence::iterator baseBegin() {$/;"	f	class:PETSc::SendOverlap
baseBegin	include/sieve/Sifter.hh	/^    typename traits::baseSequence::iterator baseBegin() {$/;"	f	class:ALE::ASifter
baseContains	include/sieve/ISieve.hh	/^    bool baseContains(const point_type& p) const {$/;"	f	class:ALE::IFSieve
baseContains	include/sieve/Sifter.hh	/^    bool baseContains(const typename traits::target_type& p) {$/;"	f	class:ALE::ASifter
baseEnd	include/sieve/Overlap.hh	/^  typename baseSequence::iterator baseEnd() {$/;"	f	class:PETSc::SendOverlap
baseEnd	include/sieve/Sifter.hh	/^    typename traits::baseSequence::iterator baseEnd() {$/;"	f	class:ALE::ASifter
baseFile	src/dm/impls/mesh/examples/tutorials/ex_coarsen.h	/^char   baseFile[2048]; \/\/stores the base file name.$/;"	v
baseFilename	src/dm/impls/mesh/examples/tests/section1-old.cxx	/^  char       baseFilename[2048]; \/\/ The base filename for mesh files$/;"	m	struct:__anon22	file:
baseFilename	src/dm/impls/mesh/examples/tests/sieve2-old.cxx	/^  char       baseFilename[2048]; \/\/ The base filename for mesh files$/;"	m	struct:__anon18	file:
baseFilename	src/dm/impls/mesh/examples/tests/topology1.cxx	/^  char       baseFilename[2048]; \/\/ The base filename for mesh files$/;"	m	struct:__anon21	file:
baseFilename	src/dm/impls/mesh/examples/tutorials/ex1.c	/^  char       baseFilename[2048];     \/\/ The base filename for mesh files$/;"	m	struct:__anon6	file:
baseFilename	src/dm/impls/mesh/examples/tutorials/ex_coarsen.c	/^  char      baseFilename[2048];  \/\/ The base filename for mesh files$/;"	m	struct:__anon7	file:
baseFilename	src/dm/impls/mesh/examples/tutorials/ex_coarsen_2.c	/^  char      baseFilename[2048];  \/\/ The base filename for mesh files$/;"	m	struct:__anon8	file:
baseFilename	src/dm/impls/mesh/examples/tutorials/ex_coarsen_3.c	/^  char      baseFilename[2048];  \/\/ The base filename for mesh files$/;"	m	struct:__anon1	file:
baseFilename	src/dm/impls/mesh/examples/tutorials/mesh_surgery.cxx	/^  char baseFilename[2048];$/;"	m	struct:__anon2	file:
baseInd	include/sieve/Sieve.hh	/^        typedef typename baseType::traits::baseInd              baseInd;$/;"	t	struct:ALE::Sieve::__anon9
baseInd	include/sieve/Sifter.hh	/^      typedef typename base_container_type::traits::pointTag                         baseInd;$/;"	t	struct:ALE::ASifter::__anon2
baseSequence	include/sieve/CartesianSieve.hh	/^    typedef CartesianSieveDef::PointSequence<point_type>   baseSequence;$/;"	t	class:ALE::CartesianSieve
baseSequence	include/sieve/Field.hh	/^    typedef points_type                                               baseSequence;$/;"	t	class:ALE::DiscreteSieve
baseSequence	include/sieve/Overlap.hh	/^  typedef Sequence<rank_type>                 baseSequence;$/;"	t	class:PETSc::SendOverlap
baseSequence	include/sieve/Sieve.hh	/^        typedef typename baseType::traits::baseSequence         baseSequence;$/;"	t	struct:ALE::Sieve::__anon9
baseSequence	include/sieve/Sifter.hh	/^      typedef typename base_container_type::traits::PointSequence baseSequence;$/;"	t	struct:ALE::ASifter::__anon2
baseSequence	include/sieve/Sifter.hh	/^    typedef typename traits::baseSequence                                           baseSequence;$/;"	t	class:ALE::Sifter
baseSize	include/sieve/ISieve.hh	/^    index_type           baseSize;$/;"	m	class:ALE::IFSieve
baseType	include/sieve/Sieve.hh	/^        typedef ALE::Sifter<Point_, Point_, Color_, ::boost::multi_index::composite_key_compare<std::less<Point_>, std::less<Color_>, std::less<Point_> >, SieveDef::RecContainer<Point_, SieveDef::Rec<Point_, Marker_> >, SieveDef::RecContainer<Point_, SieveDef::Rec<Point_, Marker_> > > baseType;$/;"	t	struct:ALE::Sieve::__anon9
base_container_type	include/sieve/Sieve.hh	/^        typedef typename baseType::traits::base_container_type  base_container_type;$/;"	t	struct:ALE::Sieve::__anon9
base_container_type	include/sieve/Sifter.hh	/^      typedef TargetCtnr_                                                            base_container_type;$/;"	t	struct:ALE::ASifter::__anon2
base_traits	include/sieve/LabelSifter.hh	/^      typedef IndexSequenceTraits<Index_, ValueExtractor_> base_traits;$/;"	t	struct:ALE::NewSifterDef::ReversibleIndexSequenceTraits
base_traits	include/sieve/Sifter.hh	/^      typedef IndexSequenceTraits<Index_, ValueExtractor_> base_traits;$/;"	t	struct:ALE::SifterDef::ReversibleIndexSequenceTraits
base_type	include/sieve/INumbering.hh	/^    typedef IUniformSection<Point_, Value_, 1, Alloc_> base_type;$/;"	t	class:ALE::IGlobalOrder
base_type	include/sieve/INumbering.hh	/^    typedef IUniformSection<Point_, Value_, 1, Alloc_> base_type;$/;"	t	class:ALE::INumbering
base_type	include/sieve/ISieve.hh	/^      typedef PointRetriever<Sieve,Visitor>           base_type;$/;"	t	class:ALE::ISieveVisitor::MeshNConeRetriever
base_type	include/sieve/ISieve.hh	/^      typedef PointRetriever<Sieve,Visitor>           base_type;$/;"	t	class:ALE::ISieveVisitor::NConeRetriever
base_type	include/sieve/LabelSifter.hh	/^          arrow_container_type::traits::template ArrowSequence<typename ::boost::multi_index::index<typename arrow_container_type::set_type,coneInd>::type, target_type, source_type, BOOST_MULTI_INDEX_MEMBER(arrow_type, source_type, source)> base_type;$/;"	t	struct:ALE::LabelSifter::__anon7::coneSequence
base_type	include/sieve/LabelSifter.hh	/^          arrow_container_type::traits::template ArrowSequence<typename ::boost::multi_index::index<typename arrow_container_type::set_type,supportInd>::type, source_type, target_type, BOOST_MULTI_INDEX_MEMBER(arrow_type, target_type, target)> base_type;$/;"	t	struct:ALE::LabelSifter::__anon7::supportSequence
base_type	include/sieve/Mesh.hh	/^    typedef Bundle<ALE::Sieve<IndexType,IndexType,IndexType>, GeneralSection<IndexType,ScalarType> > base_type;$/;"	t	class:ALE::Mesh
base_type	include/sieve/Mesh.hh	/^    typedef IBundle<IFSieve<IndexType>, IGeneralSection<IndexType, ScalarType>, IGeneralSection<IndexType, IndexType>, Label_> base_type;$/;"	t	class:ALE::IMesh
base_type	include/sieve/Numbering.hh	/^    typedef UniformSection<Point_, Value_, 1, Alloc_> base_type;$/;"	t	class:ALE::Numbering
base_type	include/sieve/Numbering.hh	/^    typedef UniformSection<Point_, Value_> base_type;$/;"	t	class:ALE::GlobalOrder
base_type	include/sieve/Sifter.hh	/^          arrow_container_type::traits::template ArrowSequence<typename ::boost::multi_index::index<typename arrow_container_type::set_type,coneInd>::type, target_type, color_type, BOOST_MULTI_INDEX_MEMBER(arrow_type, source_type, source)> base_type;$/;"	t	struct:ALE::ASifter::__anon2::coneSequence
base_type	include/sieve/Sifter.hh	/^          arrow_container_type::traits::template ArrowSequence<typename ::boost::multi_index::index<typename arrow_container_type::set_type,supportInd>::type, source_type, color_type, BOOST_MULTI_INDEX_MEMBER(arrow_type, target_type, target)> base_type;$/;"	t	struct:ALE::ASifter::__anon2::supportSequence
basename	bin/urlget.py	/^def basename(filename):$/;"	f
basis	include/petscdm.h	/^  const PetscReal *basis;         \/* The basis functions tabulated at the quadrature points *\/$/;"	m	struct:__anon19
basisDer	include/petscdm.h	/^  const PetscReal *basisDer;      \/* The basis function derivatives tabulated at the quadrature points *\/$/;"	m	struct:__anon19
bc	include/petsc-private/isimpl.h	/^  PetscSection                  bc;           \/* Describes constraints, point --> # local dofs which are constrained *\/$/;"	m	struct:_p_PetscSection
bcFuncs	include/petscdm.h	/^  void (**bcFuncs)(const PetscReal[], PetscScalar *); \/* The boundary condition function for each field component *\/$/;"	m	struct:__anon20
bcIndices	include/petsc-private/isimpl.h	/^  PetscInt                     *bcIndices;    \/* Local indices for constrained dofs *\/$/;"	m	struct:_p_PetscSection
bc_alloc_type	include/sieve/Field.hh	/^    typedef typename alloc_type::template rebind<bc_type>::other    bc_alloc_type;$/;"	t	class:ALE::FEMSection
bc_alloc_type	include/sieve/Field.hh	/^    typedef typename alloc_type::template rebind<bc_type>::other    bc_alloc_type;$/;"	t	class:ALE::GeneralSection
bc_alloc_type	include/sieve/IField.hh	/^    typedef typename base::bc_alloc_type    bc_alloc_type;$/;"	t	class:ALE::IGeneralSection
bc_atlas_alloc_type	include/sieve/Field.hh	/^    typedef typename alloc_type::template rebind<bc_type>::other    bc_atlas_alloc_type;$/;"	t	class:ALE::FEMSection
bc_atlas_ptr	include/sieve/Field.hh	/^    typedef typename bc_atlas_alloc_type::pointer                   bc_atlas_ptr;$/;"	t	class:ALE::FEMSection
bc_atlas_type	include/sieve/Field.hh	/^    typedef BCAtlas_                                                bc_atlas_type;$/;"	t	class:ALE::FEMSection
bc_ptr	include/sieve/Field.hh	/^    typedef typename bc_alloc_type::pointer                         bc_ptr;$/;"	t	class:ALE::FEMSection
bc_ptr	include/sieve/Field.hh	/^    typedef typename bc_alloc_type::pointer                         bc_ptr;$/;"	t	class:ALE::GeneralSection
bc_ptr	include/sieve/IField.hh	/^    typedef typename base::bc_ptr           bc_ptr;$/;"	t	class:ALE::IGeneralSection
bc_type	include/sieve/Field.hh	/^    typedef BCAtlas_                                                bc_type;$/;"	t	class:ALE::GeneralSection
bc_type	include/sieve/Field.hh	/^    typedef BC_                                                     bc_type;$/;"	t	class:ALE::FEMSection
bc_type	include/sieve/IField.hh	/^    typedef typename base::bc_type          bc_type;$/;"	t	class:ALE::IGeneralSection
bdElements	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^bdElements = []$/;"	v
begin	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*begin)(VecScatter,Vec,Vec,InsertMode,ScatterMode);$/;"	m	struct:_p_VecScatter
begin	include/petsclog.hh	/^    void begin(PetscObject o1 = NULL, PetscObject o2 = NULL, PetscObject o3 = NULL, PetscObject o4 = NULL) {$/;"	f	class:PETSc::LogEvent
begin	include/sieve/CartesianSieve.hh	/^      virtual iterator begin() {$/;"	f	class:ALE::CartesianSieveDef::ConeSequence
begin	include/sieve/CartesianSieve.hh	/^      virtual iterator begin() {return iterator(this->_dim, this->_sizes, this->_indices, 0);};$/;"	f	class:ALE::CartesianSieveDef::SupportSequence
begin	include/sieve/CartesianSieve.hh	/^      virtual iterator begin() {return iterator(this->_start);};$/;"	f	class:ALE::CartesianSieveDef::PointSequence
begin	include/sieve/Field.hh	/^    const_iterator begin() const {return const_iterator(this->_map.begin());};$/;"	f	class:ALE::SetFromMap
begin	include/sieve/ISieve.hh	/^      virtual iterator begin() const {return iterator(_data, _begin);};$/;"	f	class:ALE::IFSieveDef::Sequence
begin	include/sieve/ISieve.hh	/^    const_iterator begin() const {return const_iterator(this->_min);};$/;"	f	class:ALE::Interval
begin	include/sieve/LabelSifter.hh	/^        virtual iterator begin() {$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
begin	include/sieve/Overlap.hh	/^  iterator begin() {return beginP;};$/;"	f	class:PETSc::PointerSequence
begin	include/sieve/Overlap.hh	/^  iterator begin() {return iterator(beginP, beginRemoteP);};$/;"	f	class:PETSc::DualSequence
begin	include/sieve/Sieve.hh	/^       virtual iterator begin() const {$/;"	f	class:ALE::SieveDef::RecContainerTraits::PointSequence
begin	include/sieve/Sieve.hh	/^       virtual iterator begin() {$/;"	f	class:ALE::SieveDef::RecContainerTraits::TwoValueSequence
begin	include/sieve/Sieve.hh	/^       virtual iterator begin() {$/;"	f	class:ALE::SieveDef::RecContainerTraits::ValueSequence
begin	include/sieve/Sifter.hh	/^        virtual iterator begin() {$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
begin	include/sieve/Sifter.hh	/^       virtual iterator begin() {$/;"	f	class:ALE::SifterDef::RecContainerTraits::PointSequence
beginP	include/sieve/Overlap.hh	/^  const Value *beginP;$/;"	m	class:PETSc::PointerSequence
beginP	include/sieve/Overlap.hh	/^  const first_type  *beginP;$/;"	m	class:PETSc::DualSequence
beginRemoteP	include/sieve/Overlap.hh	/^  const second_type *beginRemoteP;$/;"	m	class:PETSc::DualSequence
beginandendtogether	include/petsc-private/vecimpl.h	/^  PetscBool      beginandendtogether;  \/* indicates that the scatter begin and end  function are called together, VecScatterEnd()$/;"	m	struct:_p_VecScatter
beginhook	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*beginhook)(DM,Vec,InsertMode,Vec,void*);$/;"	m	struct:_DMGlobalToLocalHookLink
beginpage	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*beginpage)(PetscDraw);$/;"	m	struct:_PetscDrawOps
beta	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^  double beta; \/\/the coarsening value$/;"	m	struct:ALE::Coarsener::coarsen_Stats
binomial	include/sieve/Selection.hh	/^    static int binomial(const int i, const int j) {$/;"	f	class:ALE::Selection
bk	config/BuildSystem/build/templates/SIDL.py	/^    import build.bk$/;"	i
bkClone	config/BuildSystem/retrieval.py	/^  def bkClone(self, url, root, name):$/;"	m	class:Retriever
bkHeadRevision	config/BuildSystem/retrieval.py	/^  def bkHeadRevision(self, root):$/;"	f
bkRetrieve	config/BuildSystem/retrieval.py	/^  def bkRetrieve(self, url, root, name):$/;"	f
bkUpdate	config/BuildSystem/retrieval.py	/^  def bkUpdate(self):$/;"	m	class:Retriever
bkfileRetrieve	config/BuildSystem/retrieval.py	/^  def bkfileRetrieve(self, url, root, canExist = 0, force = 0):$/;"	f
block_size	include/petscmat.h	/^  PetscLogDouble block_size;                         \/* block size *\/$/;"	m	struct:__anon93
bmapping	include/petscis.h	/^  ISLocalToGlobalMapping bmapping;    \/* mapping used in Vec\/MatSetValuesBlockedLocal() *\/$/;"	m	struct:_n_PetscLayout
bname	include/petsc-private/matimpl.h	/^  char        *bname,*sname,*mname;$/;"	m	struct:_p_MatBaseName
bnrm	include/petsc-private/kspimpl.h	/^  PetscReal bnrm;$/;"	m	struct:__anon20
body	config/cmakegen.py	/^    def body(indentlevel):$/;"	f	function:writePackage
boolbox	bin/TOPSInstaller.py	/^def boolbox(message="Shall I continue?", title="", choices=["Yes","No"]):$/;"	f
bootstrap	config/BuildSystem/regression/buildtest.py	/^  def bootstrap(self):$/;"	m	class:RemoteBuild
bootstrapUrlMap	config/BuildSystem/urlMappingLocal.py	/^def bootstrapUrlMap(self, url):$/;"	f
bops	include/petsc-private/petscimpl.h	/^  PetscOps             *bops;$/;"	m	struct:_p_PetscObject
bound_trav	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^struct bound_trav {    \/\/structure with all the info needed to do a DFS on the boundary to find the PSLG$/;"	s	namespace:ALE::Hierarchy
bound_trav	src/dm/impls/mesh/examples/tutorials/id_bound.h	/^struct bound_trav {      \/\/structure with all the info needed to do a DFS on the boundary to find the PSLG$/;"	s	namespace:ALE::Coarsener
boundary	include/sieve/Selection.hh	/^    static Obj<mesh_type> boundary(const Obj<mesh_type>& mesh) {$/;"	f	class:ALE::Selection
boundary	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^Obj<topology_type::patch_label_type> boundary;$/;"	m	class:ALE::Hierarchy::HierarchyBuilder
boundaryConditions_type	include/sieve/FEMProblem.hh	/^      typedef std::map<std::string, Obj<GeneralBoundaryCondition> > boundaryConditions_type;$/;"	t	class:ALE::Problem::GeneralDiscretization
boundaryConditions_type	include/sieve/Mesh.hh	/^    typedef std::map<std::string, Obj<BoundaryCondition> > boundaryConditions_type;$/;"	t	class:ALE::Discretization
boundaryV	include/sieve/Selection.hh	/^    static Obj<FlexMesh> boundaryV(const Obj<MeshTypeQ>& mesh, const int faceHeight = 1) {$/;"	f	class:ALE::Selection
boundaryV_interpolated	include/sieve/Selection.hh	/^    static Obj<FlexMesh> boundaryV_interpolated(const Obj<MeshTypeQ>& mesh, const int faceHeight = 1) {$/;"	f	class:ALE::Selection
boundaryV_uninterpolated	include/sieve/Selection.hh	/^    static Obj<FlexMesh> boundaryV_uninterpolated(const Obj<MeshTypeQ>& mesh, const int faceHeight = 1) {$/;"	f	class:ALE::Selection
boundary_interpolated	include/sieve/Selection.hh	/^    static Obj<mesh_type> boundary_interpolated(const Obj<mesh_type>& mesh, const int faceHeight = 1) {$/;"	f	class:ALE::Selection
boundary_uninterpolated	include/sieve/Selection.hh	/^    static Obj<mesh_type> boundary_uninterpolated(const Obj<mesh_type>& mesh) {$/;"	f	class:ALE::Selection
boundbox_xl	include/petsc-private/drawimpl.h	/^  PetscReal       boundbox_xl,boundbox_yl,boundbox_xr,boundbox_yr; \/* need to have this for each current point? *\/$/;"	m	struct:_p_PetscDraw
boundbox_xr	include/petsc-private/drawimpl.h	/^  PetscReal       boundbox_xl,boundbox_yl,boundbox_xr,boundbox_yr; \/* need to have this for each current point? *\/$/;"	m	struct:_p_PetscDraw
boundbox_yl	include/petsc-private/drawimpl.h	/^  PetscReal       boundbox_xl,boundbox_yl,boundbox_xr,boundbox_yr; \/* need to have this for each current point? *\/$/;"	m	struct:_p_PetscDraw
boundbox_yr	include/petsc-private/drawimpl.h	/^  PetscReal       boundbox_xl,boundbox_yl,boundbox_xr,boundbox_yr; \/* need to have this for each current point? *\/$/;"	m	struct:_p_PetscDraw
bowners	include/petsc-private/vecimpl.h	/^  PetscInt      *bowners;$/;"	m	struct:__anon24
boxedstring	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*boxedstring)(PetscDraw,PetscReal,PetscReal,int,int,const char[],PetscReal*,PetscReal*);$/;"	m	struct:_PetscDrawOps
boxes	include/web/AMSSnoopObjects.py	/^boxes  = {}  # The memory and field name for each writable text box created$/;"	v
breadthFirstSearch	config/BuildSystem/build/buildGraph.py	/^  def breadthFirstSearch(graph, returnFinished = 0):$/;"	m	class:BuildGraph
breadthFirstSearch	config/BuildSystem/graph.py	/^  def breadthFirstSearch(graph, returnFinished = 0):$/;"	m	class:DirectedGraph
bs	include/petsc-private/dmimpl.h	/^  PetscInt                bs;$/;"	m	struct:_p_DM
bs	include/petsc-private/isimpl.h	/^  PetscInt     bs;              \/* block size *\/$/;"	m	struct:_p_IS
bs	include/petsc-private/matimpl.h	/^  PetscInt      bs;                     \/* block size of the stash *\/$/;"	m	struct:__anon1
bs	include/petsc-private/vecimpl.h	/^  PetscInt               bs;$/;"	m	struct:__anon29
bs	include/petsc-private/vecimpl.h	/^  PetscInt      bs;                     \/* block size of the stash *\/$/;"	m	struct:__anon24
bs	include/petscis.h	/^  PetscInt               bs;          \/* number of elements in each block (generally for multi-component problems) Do NOT multiply above numbers by bs *\/$/;"	m	struct:_n_PetscLayout
bs	src/dm/impls/moab/dmmoab.cxx	/^  PetscInt bs; \/* Number of degrees of freedom on each entity, aka tag size in moab *\/$/;"	m	struct:__anon1	file:
bsDir	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^  bsDir     = os.path.join(configDir, 'BuildSystem')$/;"	v
bsDir	bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py	/^  bsDir     = os.path.join(configDir, 'BuildSystem')$/;"	v
bsDir	config/builder2.py	/^  bsDir     = os.path.join(configDir, 'BuildSystem')$/;"	v
bscode	bin/TOPSGenerator.py	/^          bscode = '  this->solver.setBlockSize('+str(dof)+');'$/;"	v
bstash	include/petsc-private/matimpl.h	/^  MatStash               stash,bstash;     \/* used for assembling off-proc mat emements *\/$/;"	m	struct:_p_Mat
bstash	include/petsc-private/vecimpl.h	/^  VecStash               stash,bstash; \/* used for storing off-proc values during assembly *\/$/;"	m	struct:_p_Vec
bt	include/petsc-private/dmpleximpl.h	/^  PetscBT   bt;             \/* A bit-wise index *\/$/;"	m	struct:_n_DMLabel
build	config/BuildSystem/RDict.py	/^  import build.buildGraph # This is necessary for us to create BuildGraph objects on load$/;"	i
build	config/BuildSystem/build/bk.py	/^import build.fileset$/;"	i
build	config/BuildSystem/build/bk.py	/^import build.transform$/;"	i
build	config/BuildSystem/build/builder.py	/^    import build.buildGraph$/;"	i
build	config/BuildSystem/build/compile/C.py	/^import build.processor$/;"	i
build	config/BuildSystem/build/compile/Cxx.py	/^import build.processor$/;"	i
build	config/BuildSystem/build/compile/F90.py	/^import build.processor$/;"	i
build	config/BuildSystem/build/compile/SIDL.py	/^import build.fileset$/;"	i
build	config/BuildSystem/build/compile/SIDL.py	/^import build.processor$/;"	i
build	config/BuildSystem/build/fileState.py	/^import build.fileset$/;"	i
build	config/BuildSystem/build/fileState.py	/^import build.transform$/;"	i
build	config/BuildSystem/build/framework.py	/^      import build.buildGraph$/;"	i
build	config/BuildSystem/build/framework.py	/^      import build.templates.Compile$/;"	i
build	config/BuildSystem/build/framework.py	/^      import build.templates.SIDL$/;"	i
build	config/BuildSystem/build/framework.py	/^    import build.buildGraph$/;"	i
build	config/BuildSystem/build/framework.py	/^    import build.builder$/;"	i
build	config/BuildSystem/build/framework.py	/^    import build.compile.SIDL$/;"	i
build	config/BuildSystem/build/processor.py	/^import build.fileset$/;"	i
build	config/BuildSystem/build/processor.py	/^import build.transform$/;"	i
build	config/BuildSystem/build/templates/Compile.py	/^    import build.compile.SIDL$/;"	i
build	config/BuildSystem/build/templates/Compile.py	/^import build.buildGraph$/;"	i
build	config/BuildSystem/build/templates/SIDL.py	/^      import build.templates.usingSIDL$/;"	i
build	config/BuildSystem/build/templates/SIDL.py	/^    import build.bk$/;"	i
build	config/BuildSystem/build/templates/SIDL.py	/^    import build.fileState$/;"	i
build	config/BuildSystem/build/templates/SIDL.py	/^import build.buildGraph$/;"	i
build	config/BuildSystem/build/templates/SIDL.py	/^import build.compile.SIDL$/;"	i
build	config/BuildSystem/build/templates/usingCxx.py	/^      import build.templates.usingC$/;"	i
build	config/BuildSystem/build/templates/usingCxx.py	/^    import build.compile.C$/;"	i
build	config/BuildSystem/build/templates/usingCxx.py	/^    import build.compile.Cxx$/;"	i
build	config/BuildSystem/build/templates/usingCxx.py	/^import build.buildGraph$/;"	i
build	config/BuildSystem/build/templates/usingCxx.py	/^import build.processor$/;"	i
build	config/BuildSystem/build/templates/usingCxx.py	/^import build.transform$/;"	i
build	config/BuildSystem/build/templates/usingPython.py	/^      import build.templates.usingC$/;"	i
build	config/BuildSystem/build/templates/usingPython.py	/^    import build.compile.C$/;"	i
build	config/BuildSystem/build/templates/usingPython.py	/^import build.buildGraph$/;"	i
build	config/BuildSystem/build/templates/usingPython.py	/^import build.processor$/;"	i
build	config/BuildSystem/build/templates/usingPython.py	/^import build.transform$/;"	i
build	config/BuildSystem/build/templates/usingSIDL.py	/^    import build.compile.SIDL$/;"	i
build	config/BuildSystem/build/transform.py	/^import build.fileset$/;"	i
build	config/BuildSystem/make.py	/^  def build(self, builder):$/;"	m	class:Make
build	config/BuildSystem/maker.py	/^  def build(self, builder, setupOnly = 0):$/;"	m	class:Make
build	config/BuildSystem/maker.py	/^  def build(self, builder, setupOnly = 0):$/;"	m	class:SIDLMake
build	config/BuildSystem/maker.py	/^  def build(self, builder, setupOnly):$/;"	m	class:BasicMake
build	config/BuildSystem/regression/buildtest.py	/^  def build(self):$/;"	m	class:RemoteBuild
build	config/builder2.py	/^def build(args):$/;"	f
buildArchive	config/builder.py	/^ def buildArchive(self, library, objects):$/;"	m	class:PETScMaker
buildBootstrapClient	config/BuildSystem/maker.py	/^  def buildBootstrapClient(self, builder, sidlFile, language, generatedSource):$/;"	m	class:SIDLMake
buildClient	config/BuildSystem/build/framework.py	/^  def buildClient(self, proj, lang):$/;"	m	class:Framework
buildCoordinates	include/sieve/SieveBuilder.hh	/^    static void buildCoordinates(const Obj<Bundle_>& bundle, const int embedDim, const PetscReal coords[], int numCells = -1) {$/;"	f	class:ALE::SieveBuilder
buildCoordinatesMultiple	include/sieve/SieveBuilder.hh	/^    static void buildCoordinatesMultiple(const Obj<Bundle_>& bundle, const int embedDim, const double coords[], int numGlobalCells = -1) {$/;"	f	class:ALE::SieveBuilder
buildCxxClient	config/BuildSystem/maker.py	/^  def buildCxxClient(self, builder, sidlFile, language, generatedSource):$/;"	m	class:SIDLMake
buildCxxImplementation	config/BuildSystem/maker.py	/^  def buildCxxImplementation(self, builder, sidlFile, language, generatedSource):$/;"	m	class:SIDLMake
buildCxxServer	config/BuildSystem/maker.py	/^  def buildCxxServer(self, builder, sidlFile, language, generatedSource):$/;"	m	class:SIDLMake
buildCygwinPath	config/BuildSystem/make.py	/^  def buildCygwinPath(self, builder):$/;"	m	class:Make
buildDependencies	config/builder.py	/^  def buildDependencies(self, dirname, fnames):$/;"	m	class:DependencyBuilder
buildDependenciesF90	config/builder.py	/^  def buildDependenciesF90(self):$/;"	m	class:DependencyBuilder
buildDependency	config/builder.py	/^  def buildDependency(self, dirname, source):$/;"	m	class:DependencyBuilder
buildDir	config/builder.py	/^ def buildDir(self, dirname, files, objDir):$/;"	m	class:PETScMaker
buildDirParallel	config/builder.py	/^ def buildDirParallel(self, dirname, files, objDir):$/;"	m	class:PETScMaker
buildDirectories	config/BuildSystem/maker.py	/^  def buildDirectories(self, builder):$/;"	m	class:BasicMake
buildDualCSR	include/sieve/Partitioner.hh	/^      static void buildDualCSR(const Obj<bundle_type>& bundle, const int dim, int **offsets, int **adjacency) {$/;"	f	class:ALE::New::Partitioner
buildDualCSR	include/sieve/Partitioner.hh	/^    static void buildDualCSR(const Obj<Mesh>& mesh, int *numVertices, int **offsets, int **adjacency, const bool zeroBase = true) {$/;"	f	class:ALE::Partitioner
buildDualCSRV	include/sieve/Partitioner.hh	/^    static void buildDualCSRV(const Obj<Mesh>& mesh, MeshManager<Mesh>& manager, int *numVertices, int **offsets, int **adjacency, const bool zeroBase = true) {$/;"	f	class:ALE::Partitioner
buildDynamicLibraries	config/BuildSystem/maker.py	/^  def buildDynamicLibraries(self, builder):$/;"	m	class:BasicMake
buildEtags	config/builder.py	/^ def buildEtags(self):$/;"	m	class:PETScMaker
buildExample	config/builder2.py	/^def buildExample(args):$/;"	f
buildExecutables	config/BuildSystem/maker.py	/^  def buildExecutables(self, builder):$/;"	m	class:BasicMake
buildFaceCSR	include/sieve/Partitioner.hh	/^      static void buildFaceCSR(const Obj<bundle_type>& bundle, const int dim, const Obj<typename bundle_type::numbering_type>& fNumbering, int *numEdges, int **offsets, int **adjacency) {$/;"	f	class:ALE::New::Partitioner
buildFaceDualCSR	include/sieve/Partitioner.hh	/^    static void buildFaceDualCSR(const Obj<Mesh>& mesh, const Obj<typename Mesh::numbering_type>& numbering, int *numEdges, int **offsets, int **adjacency, const bool zeroBase = true) {$/;"	f	class:ALE::Partitioner
buildFaceDualCSRV	include/sieve/Partitioner.hh	/^    static void buildFaceDualCSRV(const Obj<Mesh>& mesh, const Obj<typename Mesh::numbering_type>& numbering, int *numEdges, int **offsets, int **adjacency, const bool zeroBase = true) {$/;"	f	class:ALE::Partitioner
buildFaces	include/sieve/SieveBuilder.hh	/^    static void buildFaces(Obj<sieve_type> sieve, Obj<arrow_section_type> orientation, int dim, std::map<int, int*>& curElement, std::map<int,PointArray>& bdVertices, std::map<int,oPointArray>& faces, typename sieve_type::point_type& cell, int& cellOrientation) {$/;"	f	class:ALE::SieveBuilder
buildFile	config/builder.py	/^ def buildFile(self, filename, objDir):$/;"	m	class:PETScMaker
buildFortranStubs	config/PETSc/packages/sowing.py	/^  def buildFortranStubs(self):$/;"	m	class:Configure
buildFortranStubs	config/builder.py	/^ def buildFortranStubs(self):$/;"	m	class:PETScMaker
buildGraph	config/BuildSystem/RDict.py	/^  import build.buildGraph # This is necessary for us to create BuildGraph objects on load$/;"	i
buildGraph	config/BuildSystem/build/builder.py	/^    import build.buildGraph$/;"	i
buildGraph	config/BuildSystem/build/framework.py	/^      import build.buildGraph$/;"	i
buildGraph	config/BuildSystem/build/framework.py	/^    import build.buildGraph$/;"	i
buildGraph	config/BuildSystem/build/templates/Compile.py	/^import build.buildGraph$/;"	i
buildGraph	config/BuildSystem/build/templates/SIDL.py	/^import build.buildGraph$/;"	i
buildGraph	config/BuildSystem/build/templates/usingCxx.py	/^import build.buildGraph$/;"	i
buildGraph	config/BuildSystem/build/templates/usingPython.py	/^import build.buildGraph$/;"	i
buildHexFaces	include/sieve/SieveBuilder.hh	/^    static void buildHexFaces(Obj<sieve_type> sieve, Obj<arrow_section_type> orientation, int dim, std::map<int, int*>& curElement, std::map<int,PointArray>& bdVertices, std::map<int,oPointArray>& faces, typename sieve_type::point_type& cell, int& cellOrientation) {$/;"	f	class:ALE::SieveBuilder
buildIOR	config/BuildSystem/maker.py	/^  def buildIOR(self, builder, sidlFile, language, generatedSource):$/;"	m	class:SIDLMake
buildLibraries	config/BuildSystem/maker.py	/^  def buildLibraries(self, builder):$/;"	m	class:BasicMake
buildLibraries	config/builder.py	/^ def buildLibraries(self, libname, rootDir, parallel = False):$/;"	m	class:PETScMaker
buildPythonClient	config/BuildSystem/maker.py	/^  def buildPythonClient(self, builder, sidlFile, language, generatedSource):$/;"	m	class:SIDLMake
buildPythonServer	config/BuildSystem/maker.py	/^  def buildPythonServer(self, builder, sidlFile, language, generatedSource):$/;"	m	class:SIDLMake
buildPythonSkeleton	config/BuildSystem/maker.py	/^  def buildPythonSkeleton(self, builder, sidlFile, language, generatedSource):$/;"	m	class:SIDLMake
buildQuadraticHexFaces	include/sieve/SieveBuilder.hh	/^    static void buildQuadraticHexFaces(Obj<sieve_type> sieve, Obj<arrow_section_type> orientation, int dim, std::map<int, int*>& curElement, std::map<int,PointArray>& bdVertices, std::map<int,oPointArray>& faces, typename sieve_type::point_type& cell, int& cellOrientation) {$/;"	f	class:ALE::SieveBuilder
buildQuadraticTetFaces	include/sieve/SieveBuilder.hh	/^    static void buildQuadraticTetFaces(Obj<sieve_type> sieve, Obj<arrow_section_type> orientation,$/;"	f	class:ALE::SieveBuilder
buildSIDL	config/BuildSystem/maker.py	/^  def buildSIDL(self, builder, sidlFile):$/;"	m	class:SIDLMake
buildSharedLibrary	config/builder.py	/^ def buildSharedLibrary(self, libname, objects):$/;"	m	class:PETScMaker
buildSingleExample	config/builder2.py	/^def buildSingleExample(maker, ex):$/;"	f
buildTopology	include/sieve/SieveBuilder.hh	/^    static void buildTopology(Obj<sieve_type> sieve, int dim, int numCells, int cells[], int numVertices, bool interpolate = true, int corners = -1, int firstVertex = -1, Obj<arrow_section_type> orientation = NULL, int firstCell = 0) {$/;"	f	class:ALE::SieveBuilder
buildTopologyMultiple	include/sieve/SieveBuilder.hh	/^    static void buildTopologyMultiple(Obj<sieve_type> sieve, int dim, int numCells, int cells[], int numVertices, bool interpolate = true, int corners = -1, int firstVertex = -1, Obj<arrow_section_type> orientation = NULL) {$/;"	f	class:ALE::SieveBuilder
buildTopology_private	include/sieve/SieveBuilder.hh	/^    static void buildTopology_private(Obj<sieve_type> sieve, int dim, int numCells, int cells[], int numVertices, bool interpolate = true, int corners = -1, int firstVertex = -1, Obj<arrow_section_type> orientation = NULL, int firstCell = 0) {$/;"	f	class:ALE::SieveBuilder
builder	config/BuildSystem/build/framework.py	/^    import build.builder$/;"	i
builder	config/builder2.py	/^import builder$/;"	i
buildresidual	include/petsc-private/kspimpl.h	/^  PetscErrorCode (*buildresidual)(KSP,Vec,Vec,Vec*);   \/* Returns a pointer to the residual, or$/;"	m	struct:_KSPOps
buildsolution	include/petsc-private/kspimpl.h	/^  PetscErrorCode (*buildsolution)(KSP,Vec,Vec*);       \/* Returns a pointer to the solution, or$/;"	m	struct:_KSPOps
bundle_type	include/sieve/Completion.hh	/^      typedef Bundle_                                                                     bundle_type;$/;"	t	class:ALE::New::Completion
bundle_type	include/sieve/Distribution.hh	/^    typedef Bundle_                                                                     bundle_type;$/;"	t	class:ALE::Distribution
bundle_type	include/sieve/INumbering.hh	/^    typedef Bundle_                                                                              bundle_type;$/;"	t	class:ALE::INumberingFactory
bundle_type	include/sieve/Numbering.hh	/^    typedef Bundle_                                         bundle_type;$/;"	t	class:ALE::NumberingFactory
bundle_type	include/sieve/Partitioner.hh	/^        typedef Bundle_                          bundle_type;$/;"	t	class:ALE::New::Chaco::Partitioner
bundle_type	include/sieve/Partitioner.hh	/^        typedef Bundle_                          bundle_type;$/;"	t	class:ALE::New::ParMetis::Partitioner
bundle_type	include/sieve/Partitioner.hh	/^        typedef Bundle_                          bundle_type;$/;"	t	class:ALE::New::Zoltan::Partitioner
bundle_type	include/sieve/Partitioner.hh	/^      typedef Bundle_                          bundle_type;$/;"	t	class:ALE::New::Partitioner
bundle_type	include/sieve/Sections.hh	/^      typedef Bundle_                            bundle_type;$/;"	t	class:ALE::New::PartitionSection
bundle_type	include/sieve/Sections.hh	/^      typedef Bundle_                          bundle_type;$/;"	t	class:ALE::New::ConeSizeSection
bundle_type	include/sieve/Sections.hh	/^      typedef Bundle_                          bundle_type;$/;"	t	class:ALE::New::PartitionSizeSection
bundle_type	include/sieve/Sections.hh	/^      typedef Bundle_                          bundle_type;$/;"	t	class:ALE::New::SupportSizeSection
bundle_type	include/sieve/SieveAlgorithms.hh	/^    typedef Bundle_                                  bundle_type;$/;"	t	class:ALE::SieveAlg
bundle_type	include/sieve/SieveBuilder.hh	/^    typedef Bundle_                                      bundle_type;$/;"	t	class:ALE::SieveBuilder
bundle_type	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^typedef ALE::Bundle<sieve_type>          bundle_type;$/;"	t	file:
buttonbox	bin/TOPSInstaller.py	/^def buttonbox(message="Shall I continue?", title="", choices = ["Button1", "Button2", "Button3"],fontSize = DEFAULT_FONT_SIZE,message2 = None):$/;"	f
bx	include/petsc-private/dmdaimpl.h	/^  DMDABoundaryType      bx,by,bz;              \/* indicates type of ghost nodes at boundary *\/$/;"	m	struct:__anon23
bx	include/petscdmdatypes.h	/^  DMDABoundaryType bx,by,bz; \/* type of ghost nodes at boundary *\/$/;"	m	struct:__anon5
by	include/petsc-private/dmdaimpl.h	/^  DMDABoundaryType      bx,by,bz;              \/* indicates type of ghost nodes at boundary *\/$/;"	m	struct:__anon23
by	include/petscdmdatypes.h	/^  DMDABoundaryType bx,by,bz; \/* type of ghost nodes at boundary *\/$/;"	m	struct:__anon5
bytes	include/petsc-private/dmimpl.h	/^  size_t     bytes;$/;"	m	struct:_DMWorkLink
bz	include/petsc-private/dmdaimpl.h	/^  DMDABoundaryType      bx,by,bz;              \/* indicates type of ghost nodes at boundary *\/$/;"	m	struct:__anon23
bz	include/petscdmdatypes.h	/^  DMDABoundaryType bx,by,bz; \/* type of ghost nodes at boundary *\/$/;"	m	struct:__anon5
c	bin/matlab/classes/matlabheader.h	/^    int k,j,i,c;$/;"	m	struct:__anon1
c	include/petscmat.h	/^  PetscInt k,j,i,c;$/;"	m	struct:__anon89
cPickle	config/BuildSystem/RDict.py	/^import cPickle$/;"	i
cPickle	config/BuildSystem/build/compile/SIDL.py	/^import cPickle$/;"	i
cPickle	config/BuildSystem/build/framework.py	/^import cPickle$/;"	i
cPickle	config/BuildSystem/config/framework.py	/^import cPickle$/;"	i
cPickle	config/BuildSystem/getsplicers.py	/^import cPickle$/;"	i
cPickle	config/BuildSystem/maker.py	/^import cPickle$/;"	i
cPickle	config/BuildSystem/script.py	/^import cPickle$/;"	i
cPickle	config/BuildSystem/setsplicers.py	/^import cPickle$/;"	i
cPickle	config/BuildSystem/sourceDatabase.py	/^import cPickle$/;"	i
cPickle	config/builder.py	/^       import cPickle$/;"	i
cPickle	config/configure.py	/^  import cPickle$/;"	i
c_factor	src/dm/impls/mesh/examples/tutorials/ex_coarsen.h	/^double c_factor, r_factor;$/;"	v
cachedRanks	include/sieve/Overlap.hh	/^  rank_type  *cachedRanks;       \/\/ [?]: Cache for rank iteration during flexible assembly$/;"	m	class:PETSc::Overlap
cachedRanksValid	include/sieve/Overlap.hh	/^  bool        cachedRanksValid;  \/\/      Flag indicating whether the cahce is consistent$/;"	m	class:PETSc::Overlap
calc_sings	include/petsc-private/kspimpl.h	/^                  calc_sings,                  \/* calculate extreme Singular Values *\/$/;"	m	struct:_p_KSP
calculateBaseAndCapSize	include/sieve/ISieve.hh	/^    void calculateBaseAndCapSize() {$/;"	f	class:ALE::IFSieve
calculateCustomAtlas	include/sieve/Mesh.hh	/^    int calculateCustomAtlas(const Obj<Section_>& section, const Obj<Sequence_>& points) {$/;"	f	class:ALE::Bundle
calculateDependencies	config/BuildSystem/sourceDatabase.py	/^  def calculateDependencies(self):$/;"	m	class:DependencyAnalyzer
calculateDependencies	config/BuildSystem/sourceDatabase.py	/^  def calculateDependencies(self):$/;"	m	class:SourceDB
calculateIndices	include/sieve/FEMProblem.hh	/^      void calculateIndices(Obj<PETSC_MESH_TYPE> mesh) {$/;"	f	class:ALE::Problem::GenericFormSubProblem
calculateIndices	include/sieve/Mesh.hh	/^    void calculateIndices() {$/;"	f	class:ALE::IMesh
calculateIndices	include/sieve/Mesh.hh	/^    void calculateIndices() {$/;"	f	class:ALE::Mesh
calculateIndicesExcluded	include/sieve/FEMProblem.hh	/^      void calculateIndicesExcluded(const Obj<PETSC_MESH_TYPE> mesh, const Obj<PETSC_MESH_TYPE::real_section_type>& s, const Obj<names_type>& discs) {$/;"	f	class:ALE::Problem::GenericFormSubProblem
calculateIndicesExcluded	include/sieve/Mesh.hh	/^    void calculateIndicesExcluded(const Obj<real_section_type>& s, const Obj<names_type>& discs) {$/;"	f	class:ALE::IMesh
calculateIndicesExcluded	include/sieve/Mesh.hh	/^    void calculateIndicesExcluded(const Obj<real_section_type>& s, const Obj<names_type>& discs) {$/;"	f	class:ALE::Mesh
calculateMeshReordering	include/sieve/Ordering.hh	/^    static void calculateMeshReordering(const Obj<Mesh>& mesh, Obj<perm_type>& permutation, Obj<perm_type>& invPermutation) {$/;"	f	class:ALE::Ordering
calculateOffsets	include/sieve/INumbering.hh	/^    void calculateOffsets(const Obj<Numbering>& numbering) {$/;"	f	class:ALE::INumberingFactory
calculateOffsets	include/sieve/Numbering.hh	/^    void calculateOffsets(const Obj<Numbering>& numbering) {$/;"	f	class:ALE::NumberingFactory
can_patch	config/BuildSystem/patch.py	/^  def can_patch(self, filename):$/;"	m	class:PatchSet
candidates	include/petsc-private/tsimpl.h	/^  } candidates;$/;"	m	struct:_p_TSAdapt	typeref:struct:_p_TSAdapt::__anon8
cap	include/sieve/CartesianSieve.hh	/^    Obj<capSequence> cap() {$/;"	f	class:ALE::CartesianSieve
cap	include/sieve/Field.hh	/^    const Obj<capSequence>& cap() {return this->_points;}$/;"	f	class:ALE::DiscreteSieve
cap	include/sieve/ISieve.hh	/^    void cap(Visitor& v) const {$/;"	f	class:ALE::IFSieve
cap	include/sieve/ISieve.hh	/^    void cap(const Visitor& v) const {$/;"	f	class:ALE::IFSieve
cap	include/sieve/LabelSifter.hh	/^    capSequence cap() const {$/;"	f	class:ALE::LabelSifter
cap	include/sieve/Sifter.hh	/^    Obj<typename traits::capSequence> cap() {$/;"	f	class:ALE::ASifter
capBegin	include/sieve/Overlap.hh	/^  typename capSequence::iterator capBegin() {$/;"	f	class:PETSc::RecvOverlap
capBegin	include/sieve/Sifter.hh	/^    typename traits::capSequence::iterator capBegin() {$/;"	f	class:ALE::ASifter
capContains	include/sieve/Overlap.hh	/^  bool capContains(point_type point) {$/;"	f	class:PETSc::SendOverlap
capContains	include/sieve/Sifter.hh	/^    bool capContains(const typename traits::source_type& p) {$/;"	f	class:ALE::ASifter
capEnd	include/sieve/Overlap.hh	/^  typename capSequence::iterator capEnd() {$/;"	f	class:PETSc::RecvOverlap
capEnd	include/sieve/Sifter.hh	/^    typename traits::capSequence::iterator capEnd() {$/;"	f	class:ALE::ASifter
capInd	include/sieve/Sieve.hh	/^        typedef typename baseType::traits::capInd               capInd;$/;"	t	struct:ALE::Sieve::__anon9
capInd	include/sieve/Sifter.hh	/^      typedef typename cap_container_type::traits::pointTag                          capInd;$/;"	t	struct:ALE::ASifter::__anon2
capSequence	include/sieve/CartesianSieve.hh	/^    typedef CartesianSieveDef::PointSequence<point_type>   capSequence;$/;"	t	class:ALE::CartesianSieve
capSequence	include/sieve/Field.hh	/^    typedef points_type                                               capSequence;$/;"	t	class:ALE::DiscreteSieve
capSequence	include/sieve/LabelSifter.hh	/^    typedef std::set<int>                    capSequence;$/;"	t	class:ALE::LabelSifter
capSequence	include/sieve/Overlap.hh	/^  typedef Sequence<rank_type>                 capSequence;$/;"	t	class:PETSc::RecvOverlap
capSequence	include/sieve/Sieve.hh	/^        typedef typename baseType::traits::capSequence          capSequence;$/;"	t	struct:ALE::Sieve::__anon9
capSequence	include/sieve/Sifter.hh	/^      typedef typename cap_container_type::traits::PointSequence  capSequence;$/;"	t	struct:ALE::ASifter::__anon2
capSequence	include/sieve/Sifter.hh	/^    typedef typename traits::capSequence                                            capSequence;$/;"	t	class:ALE::Sifter
capSize	include/sieve/ISieve.hh	/^    index_type           capSize;$/;"	m	class:ALE::IFSieve
cap_container_type	include/sieve/Sieve.hh	/^        typedef typename baseType::traits::cap_container_type   cap_container_type;$/;"	t	struct:ALE::Sieve::__anon9
cap_container_type	include/sieve/Sifter.hh	/^      typedef SourceCtnr_                                                            cap_container_type;$/;"	t	struct:ALE::ASifter::__anon2
ccbox	bin/TOPSInstaller.py	/^def ccbox(message="Shall I continue?", title=""):$/;"	f
ccfl	include/petsc-private/tsimpl.h	/^    PetscReal  ccfl[16];         \/* stability limit relative to explicit Euler *\/$/;"	m	struct:_p_TSAdapt::__anon8
cell	include/sieve/Partitioner.hh	/^      typename Sieve::point_type cell;$/;"	m	class:ALE::Partitioner::AdjVisitor
cell	include/sieve/Partitioner.hh	/^      typename Sieve::point_type cell;$/;"	m	class:ALE::Partitioner::MeetVisitor
cell	include/sieve/Selection.hh	/^      const point_type       cell;$/;"	m	class:ALE::Selection::FaceInserterV
cell	include/sieve/Selection.hh	/^      const point_type      cell;$/;"	m	class:ALE::Selection::FaceInserter
cellIds	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^  int    *cellIds; \/* Id of each cell *\/$/;"	m	struct:__anon4	file:
cellOffset	include/sieve/Partitioner.hh	/^      const int                  cellOffset;$/;"	m	class:ALE::Partitioner::AdjVisitor
cellSimplex	src/dm/impls/plex/examples/tests/ex1.c	/^  PetscBool cellSimplex;           \/* Use simplices or hexes *\/$/;"	m	struct:__anon4	file:
cellSimplex	src/dm/impls/plex/examples/tests/ex4.c	/^  PetscBool cellSimplex;       \/* Use simplices or hexes *\/$/;"	m	struct:__anon6	file:
cellSimplex	src/dm/impls/plex/examples/tests/ex5.c	/^  PetscBool cellSimplex; \/* Use simplices or hexes *\/$/;"	m	struct:__anon5	file:
cellSimplex	src/dm/impls/plex/examples/tests/ex7.c	/^  PetscBool cellSimplex;                  \/* Use simplices or hexes *\/$/;"	m	struct:__anon1	file:
cellToFaceTransform	config/PETSc/FEM.py	/^  def cellToFaceTransform(self, shape, cmpd, coordVar, quadVar, face):$/;"	m	class:QuadratureGenerator
cellVols	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^  double *cellVols;$/;"	m	struct:__anon4	file:
cellX	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^  double *cellX;   \/* X of cell center *\/$/;"	m	struct:__anon4	file:
cellY	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^  double *cellY;   \/* Y of cell center *\/$/;"	m	struct:__anon4	file:
cellZ	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^  double *cellZ;   \/* Z of cell center *\/$/;"	m	struct:__anon4	file:
cells	include/petscdm.h	/^  PetscInt  *cells;  \/* The cell containing each point *\/$/;"	m	struct:_DMInterpolationInfo
cells	include/petscdmmesh.h	/^  PetscInt  *cells;  \/* The cell containing each point *\/$/;"	m	struct:_DMMeshInterpolationInfo
cells	include/sieve/Partitioner.hh	/^      point_type      *cells;$/;"	m	class:ALE::Partitioner::MeshManager
cellsectionrealcreate_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  cellsectionrealcreate_(DM *mesh, CHAR name PETSC_MIXED_LEN(lenN), PetscInt *fiberDim, int *ierr PETSC_END_LEN(lenN))$/;"	f
cellsectionrealcreate_	src/dm/impls/mesh/ftn-custom/zmesh.c	15;"	d	file:
cellsectionrealcreate_	src/dm/impls/mesh/ftn-custom/zmesh.c	40;"	d	file:
cfltime	include/petsc-private/tsimpl.h	/^  PetscReal cfltime,cfltime_local;$/;"	m	struct:_p_TS
cfltime_local	include/petsc-private/tsimpl.h	/^  PetscReal cfltime,cfltime_local;$/;"	m	struct:_p_TS
changeDepth	include/sieve/Sieve.hh	/^        changeDepth(int newDepth) : newDepth(newDepth) {};$/;"	f	struct:ALE::Sieve::changeDepth
changeDepth	include/sieve/Sieve.hh	/^      struct changeDepth {$/;"	s	class:ALE::Sieve
changeHeight	include/sieve/Sieve.hh	/^        changeHeight(int newHeight) : newHeight(newHeight) {};$/;"	f	struct:ALE::Sieve::changeHeight
changeHeight	include/sieve/Sieve.hh	/^      struct changeHeight {$/;"	s	class:ALE::Sieve
changeMarker	include/sieve/Sieve.hh	/^        changeMarker(int newMarker) : newMarker(newMarker) {};$/;"	f	struct:ALE::Sieve::changeMarker
changeMarker	include/sieve/Sieve.hh	/^      struct changeMarker {$/;"	s	class:ALE::Sieve
changeSet	config/BuildSystem/sourceControl.py	/^  def changeSet(self):$/;"	m	class:BitKeeper
changeSet	config/BuildSystem/sourceControl.py	/^  def changeSet(self):$/;"	m	class:VersionControl
changedmethod	include/petscoptions.h	/^  PetscBool        printhelp,changedmethod,alreadyprinted;$/;"	m	struct:__anon35
chart	include/sieve/ISieve.hh	/^    chart_type           chart;$/;"	m	class:ALE::IFSieve
chart_type	include/sieve/Field.hh	/^    typedef SetFromMap<values_type>                                                               chart_type;$/;"	t	class:ALE::NewUniformSection
chart_type	include/sieve/Field.hh	/^    typedef std::set<point_type, std::less<point_type>, alloc_type> chart_type;$/;"	t	class:ALE::ConstantSection
chart_type	include/sieve/Field.hh	/^    typedef typename atlas_type::chart_type                         chart_type;$/;"	t	class:ALE::FEMSection
chart_type	include/sieve/Field.hh	/^    typedef typename atlas_type::chart_type                         chart_type;$/;"	t	class:ALE::GeneralSection
chart_type	include/sieve/Field.hh	/^    typedef typename atlas_type::chart_type                         chart_type;$/;"	t	class:ALE::Section
chart_type	include/sieve/Field.hh	/^    typedef typename atlas_type::chart_type                  chart_type;$/;"	t	class:ALE::UniformSection
chart_type	include/sieve/Field.hh	/^    typedef typename section_type::chart_type        chart_type;$/;"	t	class:ALE::Field
chart_type	include/sieve/IField.hh	/^    typedef Interval<point_type, alloc_type> chart_type;$/;"	t	class:ALE::IConstantSection
chart_type	include/sieve/IField.hh	/^    typedef typename atlas_type::chart_type                         chart_type;$/;"	t	class:ALE::IUniformSection
chart_type	include/sieve/IField.hh	/^    typedef typename base::chart_type       chart_type;$/;"	t	class:ALE::IGeneralSection
chart_type	include/sieve/IField.hh	/^    typedef typename base::chart_type       chart_type;$/;"	t	class:ALE::ISection
chart_type	include/sieve/ISieve.hh	/^    typedef Interval<point_type, point_allocator_type> chart_type;$/;"	t	class:ALE::IFSieve
chart_type	include/sieve/LabelSifter.hh	/^    typedef Interval<target_type> chart_type;$/;"	t	class:ALE::LabelSifter
chart_type	include/sieve/Sections.hh	/^      typedef PartitionDomain<point_type>        chart_type;$/;"	t	class:ALE::New::PartitionSection
chart_type	include/sieve/Sections.hh	/^      typedef PartitionDomain<sieve_type>      chart_type;$/;"	t	class:ALE::New::ConeSection
chart_type	include/sieve/Sections.hh	/^      typedef PartitionDomain<sieve_type>      chart_type;$/;"	t	class:ALE::New::SupportSection
chart_type	include/sieve/Sections.hh	/^    typedef int                                       chart_type;$/;"	t	class:ALE::LabelBaseSectionV
chart_type	include/sieve/Sections.hh	/^    typedef int chart_type;$/;"	t	class:ALE::BaseSectionV
chart_type	include/sieve/Sections.hh	/^    typedef typename atlas_type::chart_type          chart_type;$/;"	t	class:ALE::ConeSectionV
chart_type	include/sieve/Sections.hh	/^    typedef typename atlas_type::chart_type          chart_type;$/;"	t	class:ALE::OrientedConeSectionV
chart_type	include/sieve/Sections.hh	/^    typedef typename atlas_type::chart_type         chart_type;$/;"	t	class:ALE::ConeSection
chart_type	include/sieve/Sections.hh	/^    typedef typename atlas_type::chart_type      chart_type;$/;"	t	class:ALE::ConeSizeSectionV
chart_type	include/sieve/Sections.hh	/^    typedef typename atlas_type::chart_type     chart_type;$/;"	t	class:ALE::ConeSizeSection
chart_type	include/sieve/Sections.hh	/^    typedef typename atlas_type::chart_type     chart_type;$/;"	t	class:ALE::LabelSection
chart_type	include/sieve/Sections.hh	/^    typedef typename sieve_type::traits::baseSequence chart_type;$/;"	t	class:ALE::BaseSection
chart_type	include/sieve/Sections.hh	/^    typedef typename sieve_type::traits::baseSequence chart_type;$/;"	t	class:ALE::LabelBaseSection
check	config/BuildSystem/config/functions.py	/^  def check(self, funcName, libraries = None):$/;"	m	class:Configure
check	config/BuildSystem/config/headers.py	/^  def check(self, header):$/;"	m	class:Configure
check	config/BuildSystem/config/libraries.py	/^  def check(self, libName, funcs, libDir = None, otherLibs = [], prototype = '', call = '', fortranMangle = 0, cxxMangle = 0, cxxLink = 0):$/;"	m	class:Configure
check	config/BuildSystem/config/types.py	/^  def check(self, typeName, defaultType = None, includes = []):$/;"	m	class:Configure
check	config/builder.py	/^     def check(filename):$/;"	f	function:PETScMaker.buildLibraries
check	config/builder.py	/^ def check(self):$/;"	m	class:PETScMaker
check	config/builder2.py	/^def check(args):$/;"	f
check	include/petsc-private/matimpl.h	/^  PetscBool  check;                         \/* indicates that at MatAssembly() it should check if compressed rows will be efficient *\/$/;"	m	struct:__anon3
check64BitBLASIndices	config/BuildSystem/config/packages/BlasLapack.py	/^  def check64BitBLASIndices(self):$/;"	m	class:Configure
checkASEDir	config/BuildSystem/config/ase.py	/^  def checkASEDir(self, dir):$/;"	m	class:Configure
checkArchive	config/BuildSystem/config/setCompilers.py	/^    def checkArchive(command, status, output, error):$/;"	f	function:Configure.checkArchiver
checkArchiver	config/BuildSystem/config/setCompilers.py	/^  def checkArchiver(self):$/;"	m	class:Configure
checkArrow	include/sieve/Sieve.hh	/^      virtual bool checkArrow(const typename traits::arrow_type& a) {$/;"	f	class:ALE::Sieve
checkArrow	include/sieve/Sifter.hh	/^    virtual bool checkArrow(const typename traits::arrow_type& a) {$/;"	f	class:ALE::ASifter
checkBitsPerByte	config/BuildSystem/config/types.py	/^  def checkBitsPerByte(self):$/;"	f
checkBlas	config/BuildSystem/config/packages/BlasLapack.py	/^  def checkBlas(self, blasLibrary, otherLibs, fortranMangle, routineIn = 'dot'):$/;"	m	class:Configure
checkC99Complex	config/BuildSystem/config/types.py	/^  def checkC99Complex(self):$/;"	f
checkCCompiler	config/BuildSystem/config/setCompilers.py	/^  def checkCCompiler(self):$/;"	m	class:Configure
checkCFormatting	config/BuildSystem/config/compilers.py	/^  def checkCFormatting(self):$/;"	m	class:Configure
checkCLibraries	config/BuildSystem/config/compilers.py	/^  def checkCLibraries(self):$/;"	m	class:Configure
checkCPreprocessor	config/BuildSystem/config/setCompilers.py	/^  def checkCPreprocessor(self):$/;"	m	class:Configure
checkCStaticInline	config/BuildSystem/config/compilers.py	/^  def checkCStaticInline(self):$/;"	m	class:Configure
checkCUDACompiler	config/BuildSystem/config/setCompilers.py	/^  def checkCUDACompiler(self):$/;"	m	class:Configure
checkCUDAPreprocessor	config/BuildSystem/config/setCompilers.py	/^  def checkCUDAPreprocessor(self):$/;"	m	class:Configure
checkCUDAVersion	config/PETSc/packages/cuda.py	/^  def checkCUDAVersion(self):$/;"	m	class:Configure
checkCUSPVersion	config/PETSc/packages/cuda.py	/^  def checkCUSPVersion(self):$/;"	m	class:Configure
checkCommand	config/BuildSystem/configure.py	/^      def checkCommand(command, status, output, error):$/;"	f	function:Configure.checkCompiler
checkCompile	config/BuildSystem/config/base.py	/^  def checkCompile(self, includes = '', body = '', cleanup = 1, codeBegin = None, codeEnd = None):$/;"	m	class:Configure
checkCompiler	config/BuildSystem/build/compile/C.py	/^  def checkCompiler(self):$/;"	m	class:Compiler
checkCompiler	config/BuildSystem/build/compile/Cxx.py	/^  def checkCompiler(self):$/;"	m	class:Compiler
checkCompiler	config/BuildSystem/build/compile/F90.py	/^  def checkCompiler(self):$/;"	m	class:Compiler
checkCompiler	config/BuildSystem/config/setCompilers.py	/^  def checkCompiler(self, language):$/;"	m	class:Configure
checkCompiler	config/BuildSystem/configure.py	/^  def checkCompiler(self):$/;"	m	class:Configure
checkCompilerFlag	config/BuildSystem/config/setCompilers.py	/^  def checkCompilerFlag(self, flag, includes = '', body = '', compilerOnly = 0):$/;"	m	class:Configure
checkCompression	config/BuildSystem/config/libraries.py	/^  def checkCompression(self):$/;"	m	class:Configure
checkConst	config/BuildSystem/config/types.py	/^  def checkConst(self):$/;"	f
checkCxxCompiler	config/BuildSystem/config/setCompilers.py	/^  def checkCxxCompiler(self):$/;"	m	class:Configure
checkCxxComplex	config/BuildSystem/config/types.py	/^  def checkCxxComplex(self):$/;"	f
checkCxxLibraries	config/BuildSystem/config/compilers.py	/^  def checkCxxLibraries(self):$/;"	m	class:Configure
checkCxxNamespace	config/BuildSystem/config/compilers.py	/^  def checkCxxNamespace(self):$/;"	m	class:Configure
checkCxxOptionalExtensions	config/BuildSystem/config/compilers.py	/^  def checkCxxOptionalExtensions(self):$/;"	m	class:Configure
checkCxxPreprocessor	config/BuildSystem/config/setCompilers.py	/^  def checkCxxPreprocessor(self):$/;"	m	class:Configure
checkCxxStaticInline	config/BuildSystem/config/compilers.py	/^  def checkCxxStaticInline(self):$/;"	m	class:Configure
checkCygwin	config/BuildSystem/config/preTests.py	/^  def checkCygwin(self):$/;"	m	class:Configure
checkCygwinPython	config/BuildSystem/config/preTests.py	/^  def checkCygwinPython(self):$/;"	m	class:Configure
checkDLLLibs	config/BuildSystem/checkdlllibs.py	/^def checkDLLLibs():$/;"	f
checkDependencies	config/BuildSystem/config/package.py	/^  def checkDependencies(self, libs = None, incls = None):$/;"	m	class:GNUPackage
checkDependencies	config/BuildSystem/config/package.py	/^  def checkDependencies(self, libs = None, incls = None):$/;"	m	class:Package
checkDependencyGenerationFlag	config/BuildSystem/config/compilers.py	/^  def checkDependencyGenerationFlag(self):$/;"	m	class:Configure
checkDestdir	config/install.py	/^  def checkDestdir(self):$/;"	m	class:Installer
checkDimension	include/sieve/Field.hh	/^    void checkDimension(const int& dim) {$/;"	f	class:ALE::ConstantSection
checkDimension	include/sieve/Field.hh	/^    void checkDimension(const int& dim) {$/;"	f	class:ALE::FauxConstantSection
checkDimension	include/sieve/Field.hh	/^    void checkDimension(const int& dim) {$/;"	f	class:ALE::NewUniformSection
checkDimension	include/sieve/Field.hh	/^    void checkDimension(const int& dim) {$/;"	f	class:ALE::UniformSection
checkDimension	include/sieve/IField.hh	/^    void checkDimension(const int& dim) {$/;"	f	class:ALE::IConstantSection
checkDimension	include/sieve/IField.hh	/^    void checkDimension(const int& dim) {$/;"	f	class:ALE::IUniformSection
checkDir	config/builder.py	/^  def checkDir(self, dirname):$/;"	m	class:DirectoryTreeWalker
checkDownload	config/BuildSystem/config/package.py	/^  def checkDownload(self, requireDownload = 1):$/;"	m	class:GNUPackage
checkDownload	config/BuildSystem/config/package.py	/^  def checkDownload(self, requireDownload = 1):$/;"	m	class:Package
checkDownload	config/BuildSystem/config/packages/MPI.py	/^  def checkDownload(self, requireDownload = 1):$/;"	m	class:Configure
checkDynamic	config/BuildSystem/config/libraries.py	/^  def checkDynamic(self):$/;"	m	class:Configure
checkDynamicLinker	config/BuildSystem/config/setCompilers.py	/^  def checkDynamicLinker(self):$/;"	m	class:Configure
checkDynamicLoadFlag	config/BuildSystem/config/compilers.py	/^  def checkDynamicLoadFlag(self):$/;"	m	class:Configure
checkESSL	config/BuildSystem/config/packages/BlasLapack.py	/^  def checkESSL(self):$/;"	m	class:Configure
checkEndian	config/BuildSystem/config/types.py	/^  def checkEndian(self):$/;"	f
checkExecutable	config/BuildSystem/config/base.py	/^  def checkExecutable(self, dir, name):$/;"	m	class:Configure
checkExecutable	config/BuildSystem/nargs.py	/^  def checkExecutable(self, dir, name):$/;"	m	class:ArgExecutable
checkFile	config/BuildSystem/build/fileset.py	/^  def checkFile(self, filename):$/;"	m	class:FileSet
checkFile	config/BuildSystem/build/fileset.py	/^  def checkFile(self, filename, root = None):$/;"	m	class:RootedFileSet
checkFileTypes	config/BuildSystem/config/types.py	/^  def checkFileTypes(self):$/;"	f
checkForRoutine	config/BuildSystem/config/packages/BlasLapack.py	/^  def checkForRoutine(self,routine):$/;"	m	class:Configure
checkFortran2003	config/BuildSystem/config/compilers.py	/^  def checkFortran2003(self):$/;"	m	class:Configure
checkFortran90	config/BuildSystem/config/compilers.py	/^  def checkFortran90(self):$/;"	m	class:Configure
checkFortran90Array	config/BuildSystem/config/compilers.py	/^  def checkFortran90Array(self):$/;"	m	class:Configure
checkFortranComments	config/BuildSystem/config/setCompilers.py	/^  def checkFortranComments(self):$/;"	m	class:Configure
checkFortranCompiler	config/BuildSystem/config/setCompilers.py	/^  def checkFortranCompiler(self):$/;"	m	class:Configure
checkFortranDReal	config/BuildSystem/config/types.py	/^  def checkFortranDReal(self):$/;"	f
checkFortranDefineCompilerOption	config/BuildSystem/config/compilers.py	/^  def checkFortranDefineCompilerOption(self):$/;"	m	class:Configure
checkFortranKind	config/BuildSystem/config/types.py	/^  def checkFortranKind(self):$/;"	f
checkFortranLibraries	config/BuildSystem/config/compilers.py	/^  def checkFortranLibraries(self):$/;"	m	class:Configure
checkFortranLinkingCxx	config/BuildSystem/config/compilers.py	/^  def checkFortranLinkingCxx(self):$/;"	m	class:Configure
checkFortranModuleInclude	config/BuildSystem/config/compilers.py	/^  def checkFortranModuleInclude(self):$/;"	m	class:Configure
checkFortranModuleOutput	config/BuildSystem/config/compilers.py	/^  def checkFortranModuleOutput(self):$/;"	m	class:Configure
checkFortranNameMangling	config/BuildSystem/config/compilers.py	/^  def checkFortranNameMangling(self):$/;"	m	class:Configure
checkFortranNameManglingDouble	config/BuildSystem/config/compilers.py	/^  def checkFortranNameManglingDouble(self):$/;"	m	class:Configure
checkFortranPreprocessor	config/BuildSystem/config/compilers.py	/^  def checkFortranPreprocessor(self):$/;"	m	class:Configure
checkFortranStar	config/BuildSystem/config/types.py	/^  def checkFortranStar(self):$/;"	f
checkFortranTypeSizes	config/BuildSystem/config/compilers.py	/^  def checkFortranTypeSizes(self):$/;"	m	class:Configure
checkFreeReturnType	config/BuildSystem/config/functions.py	/^  def checkFreeReturnType(self):$/;"	f
checkInclude	config/BuildSystem/config/headers.py	/^  def checkInclude(self, incl, hfiles, otherIncludes = [], timeout = 600.0):$/;"	m	class:Configure
checkInclude	config/BuildSystem/config/package.py	/^  def checkInclude(self, incl, hfiles, otherIncludes = [], timeout = 600.0):$/;"	m	class:Package
checkInclude	config/BuildSystem/config/packages/PETSc.py	/^  def checkInclude(self, includeDir):$/;"	m	class:Configure
checkInclude	config/BuildSystem/config/python.py	/^  def checkInclude(self, includeDir):$/;"	m	class:Configure
checkInclude	config/PETSc/petsc.py	/^  def checkInclude(self, includeDir):$/;"	m	class:Configure
checkIncludeDirectory	config/BuildSystem/build/processor.py	/^  def checkIncludeDirectory(self, dirname):$/;"	m	class:Compiler
checkInitialFlags	config/BuildSystem/config/setCompilers.py	/^  def checkInitialFlags(self):$/;"	m	class:Configure
checkIntegerTypes	config/BuildSystem/config/types.py	/^  def checkIntegerTypes(self):$/;"	f
checkInteractive	config/BuildSystem/nargs.py	/^def checkInteractive(key):$/;"	f
checkKey	config/BuildSystem/nargs.py	/^  def checkKey(self):$/;"	m	class:Arg
checkLabel	include/sieve/Mesh.hh	/^    void checkLabel(const std::string& name) {$/;"	f	class:ALE::Bundle
checkLabel	include/sieve/Mesh.hh	/^    void checkLabel(const std::string& name) {$/;"	f	class:ALE::IBundle
checkLabel	include/sieve/Topology.hh	/^    void checkLabel(const std::string& name, const patch_type& patch) {$/;"	f	class:ALE::Topology
checkLabel	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  void checkLabel(const ALE::Obj<mesh_type::label_type>& label, const char basename[]) {$/;"	f	class:FunctionTestIDistribution
checkLabel	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  static void checkLabel(Label& labelA, Label& labelB) {$/;"	f	class:FunctionTestIMesh
checkLabel	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  static void checkLabel(Label& labelA, Label& labelB, Renumbering& renumbering) {$/;"	f	class:FunctionTestIMesh
checkLanguage	config/BuildSystem/build/compile/SIDL.py	/^  checkLanguage = staticmethod(checkLanguage)$/;"	v	class:SIDLConstants
checkLanguage	config/BuildSystem/build/compile/SIDL.py	/^  def checkLanguage(language):$/;"	m	class:SIDLConstants
checkLapack	config/BuildSystem/config/packages/BlasLapack.py	/^  def checkLapack(self, lapackLibrary, otherLibs, fortranMangle, routinesIn = ['getrs', 'geev']):$/;"	m	class:Configure
checkLargeFileIO	config/BuildSystem/config/setCompilers.py	/^  def checkLargeFileIO(self):$/;"	m	class:Configure
checkLib	config/BuildSystem/config/packages/BlasLapack.py	/^  def checkLib(self, lapackLibrary, blasLibrary = None):$/;"	m	class:Configure
checkLib	config/BuildSystem/config/packages/PETSc.py	/^  def checkLib(self, libraries):$/;"	m	class:Configure
checkLib	config/PETSc/packages/scalapack.py	/^  def checkLib(self, lib, func, mangle, otherLibs = []):$/;"	m	class:Configure
checkLib	config/PETSc/petsc.py	/^  def checkLib(self, libraries):$/;"	m	class:Configure
checkLibC	config/BuildSystem/config/setCompilers.py	/^  def checkLibC(self):$/;"	m	class:Configure
checkLink	config/BuildSystem/config/base.py	/^  def checkLink(self, includes = '', body = '', cleanup = 1, codeBegin = None, codeEnd = None, shared = 0, linkLanguage=None):$/;"	m	class:Configure
checkLinkerFlag	config/BuildSystem/config/setCompilers.py	/^  def checkLinkerFlag(self, flag):$/;"	m	class:Configure
checkLinkerMac	config/BuildSystem/config/setCompilers.py	/^  def checkLinkerMac(self):$/;"	m	class:Configure
checkLog	config/BuildSystem/logger.py	/^  def checkLog(self, logName):$/;"	m	class:Logger
checkMPICompilerOverride	config/BuildSystem/config/setCompilers.py	/^  def checkMPICompilerOverride(self):$/;"	m	class:Configure
checkMath	config/BuildSystem/config/headers.py	/^  def checkMath(self):$/;"	f
checkMath	config/BuildSystem/config/libraries.py	/^  def checkMath(self):$/;"	m	class:Configure
checkMathErf	config/BuildSystem/config/libraries.py	/^  def checkMathErf(self):$/;"	m	class:Configure
checkMathTgamma	config/BuildSystem/config/libraries.py	/^  def checkMathTgamma(self):$/;"	m	class:Configure
checkMatrix	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^  void checkMatrix(Mat A, PetscInt dnz[], PetscInt onz[], const char basename[]) {$/;"	f	class:FunctionTestDistribution
checkMatrix	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  void checkMatrix(Mat A, PetscInt dnz[], PetscInt onz[], const char basename[], real_section_type& section, mesh_type::order_type& globalOrder) {$/;"	f	class:FunctionTestIDistribution
checkMemcmp	config/BuildSystem/config/functions.py	/^  def checkMemcmp(self):$/;"	m	class:Configure
checkMesh	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^  void checkMesh(const ALE::Obj<mesh_type>& mesh, const char basename[]) {$/;"	f	class:FunctionTestDistribution
checkMesh	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  void checkMesh(const ALE::Obj<mesh_type>& mesh, const char basename[]) {$/;"	f	class:FunctionTestIDistribution
checkMesh	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  static void checkMesh(Mesh& meshA, Mesh& meshB) {$/;"	f	class:FunctionTestIMesh
checkMesh	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  static void checkMesh(Mesh& meshA, Mesh& meshB, Renumbering& renumbering) {$/;"	f	class:FunctionTestIMesh
checkMissing	config/BuildSystem/config/packages/BlasLapack.py	/^  def checkMissing(self):$/;"	m	class:Configure
checkNVCCDoubleAlign	config/PETSc/packages/cuda.py	/^  def checkNVCCDoubleAlign(self):$/;"	m	class:Configure
checkNanosleep	config/BuildSystem/config/functions.py	/^  def checkNanosleep(self):$/;"	f
checkNoOptFlag	config/BuildSystem/config/packages/BlasLapack.py	/^  def checkNoOptFlag(self):$/;"	m	class:Configure
checkNoOptFlag	config/BuildSystem/config/packages/f2cblaslapack.py	/^  def checkNoOptFlag(self):$/;"	m	class:Configure
checkOldTag	config/BuildSystem/build/processor.py	/^  def checkOldTag(self, f, tag):$/;"	m	class:Processor
checkOptions	config/BuildSystem/config/preTests.py	/^  def checkOptions(self, options, convertOptions = False):$/;"	f
checkOrder	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  void checkOrder(mesh_type::order_type& globalOrder, const char basename[]) {$/;"	f	class:FunctionTestIDistribution
checkOverlapOutput	src/dm/impls/mesh/examples/tests/sieveTests.py	/^  def checkOverlapOutput(self, numProcs):$/;"	m	class:SieveTests
checkPESSL	config/BuildSystem/config/packages/BlasLapack.py	/^  def checkPESSL(self):$/;"	m	class:Configure
checkPETScLink	config/BuildSystem/config/packages/PETSc.py	/^  def checkPETScLink(self, includes, body, cleanup = 1, codeBegin = None, codeEnd = None, shared = None):$/;"	m	class:Configure
checkPETScLink	config/PETSc/petsc.py	/^  def checkPETScLink(self, includes, body, cleanup = 1, codeBegin = None, codeEnd = None, shared = None):$/;"	m	class:Configure
checkPIC	config/BuildSystem/config/setCompilers.py	/^  def checkPIC(self):$/;"	m	class:Configure
checkPID	config/BuildSystem/config/types.py	/^  def checkPID(self):$/;"	f
checkPackageLink	config/BuildSystem/config/package.py	/^  def checkPackageLink(self, includes, body, cleanup = 1, codeBegin = None, codeEnd = None, shared = 0):$/;"	m	class:Package
checkPatch	include/sieve/Field.hh	/^    void checkPatch(const patch_type& patch) const {$/;"	f	class:ALE::Field
checkPatch	include/sieve/Topology.hh	/^    void checkPatch(const patch_type& patch) {$/;"	f	class:ALE::Topology
checkPoint	include/sieve/Field.hh	/^    void checkPoint(const point_type& point) const {$/;"	f	class:ALE::ConstantSection
checkPoint	include/sieve/IField.hh	/^    void checkPoint(const point_type& point) const {$/;"	f	class:ALE::IConstantSection
checkPoint	include/sieve/ISieve.hh	/^    void checkPoint(const point_type& point) const {$/;"	f	class:ALE::Interval
checkPreallocationOutput	src/dm/impls/mesh/examples/tests/sieveTests.py	/^  def checkPreallocationOutput(self, numProcs):$/;"	m	class:SieveTests
checkPrefix	config/install.py	/^  def checkPrefix(self):$/;"	m	class:Installer
checkPreprocess	config/BuildSystem/config/base.py	/^  def checkPreprocess(self, codeStr, timeout = 600.0):$/;"	m	class:Configure
checkPrototype	config/PETSc/utilities/missing.py	/^  def checkPrototype(self, includes = '', body = '', cleanup = 1, codeBegin = None, codeEnd = None):$/;"	m	class:Configure
checkPython	config/BuildSystem/script.py	/^  def checkPython(self):$/;"	m	class:Script
checkPythonLink	config/BuildSystem/config/python.py	/^  def checkPythonLink(self, includes, body, cleanup = 1, codeBegin = None, codeEnd = None, shared = 0):$/;"	m	class:Configure
checkRanlib	config/BuildSystem/config/setCompilers.py	/^    def checkRanlib(command, status, output, error):$/;"	f	function:Configure.checkArchiver
checkRealtime	config/BuildSystem/config/libraries.py	/^  def checkRealtime(self):$/;"	m	class:Configure
checkRecursiveMacros	config/BuildSystem/config/headers.py	/^  def checkRecursiveMacros(self):$/;"	f
checkRedHat9	config/BuildSystem/config/preTests.py	/^  def checkRedHat9(self):$/;"	m	class:Configure
checkRestrict	config/BuildSystem/config/compilers.py	/^  def checkRestrict(self,language):$/;"	m	class:Configure
checkRun	config/BuildSystem/config/base.py	/^  def checkRun(self, includes = '', body = '', cleanup = 1, defaultArg = '', executor = None):$/;"	m	class:Configure
checkSection	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  static void checkSection(ALE::IConstantSection<Point_, Value_>& sectionA, ALE::IConstantSection<Point_, Value_>& sectionB) {$/;"	f	class:FunctionTestIMesh
checkSection	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  static void checkSection(ALE::IConstantSection<Point_, Value_>& sectionA, ALE::IConstantSection<Point_, Value_>& sectionB, Renumbering& renumbering) {$/;"	f	class:FunctionTestIMesh
checkSection	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  static void checkSection(Section& sectionA, Section& sectionB) {$/;"	f	class:FunctionTestIMesh
checkSection	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  static void checkSection(Section& sectionA, Section& sectionB, Renumbering& renumbering) {$/;"	f	class:FunctionTestIMesh
checkSetup	config/BuildSystem/config/compile/SIDL.py	/^  def checkSetup(self):$/;"	m	class:Compiler
checkSetup	config/BuildSystem/config/compile/processor.py	/^  def checkSetup(self):$/;"	m	class:Processor
checkShared	config/BuildSystem/config/libraries.py	/^  def checkShared(self, includes, initFunction, checkFunction, finiFunction = None, checkLink = None, libraries = [], initArgs = '&argc, &argv', boolType = 'int', noCheckArg = 0, defaultArg = '', executor = None):$/;"	m	class:Configure
checkSharedDynamicPicOptions	config/PETSc/utilities/sharedLibraries.py	/^  def checkSharedDynamicPicOptions(self):$/;"	m	class:Configure
checkSharedLibrary	config/BuildSystem/build/processor.py	/^  def checkSharedLibrary(self, source):$/;"	m	class:SharedLinker
checkSharedLibrary	config/BuildSystem/config/package.py	/^  def checkSharedLibrary(self):$/;"	m	class:Package
checkSharedLibrary	config/BuildSystem/config/packages/MPI.py	/^  def checkSharedLibrary(self):$/;"	m	class:Configure
checkSharedLibrary	config/BuildSystem/config/packages/PETSc.py	/^  def checkSharedLibrary(self, libraries):$/;"	m	class:Configure
checkSharedLibrary	config/PETSc/petsc.py	/^  def checkSharedLibrary(self, libraries):$/;"	m	class:Configure
checkSharedLinker	config/BuildSystem/config/setCompilers.py	/^  def checkSharedLinker(self):$/;"	m	class:Configure
checkSharedLinkerPaths	config/BuildSystem/config/setCompilers.py	/^  def checkSharedLinkerPaths(self):$/;"	m	class:Configure
checkSieve	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  static void checkSieve(ISieve& sieveA, const ISieve& sieveB) {$/;"	f	class:FunctionTestIMesh
checkSieve	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  static void checkSieve(ISieve& sieveA, const ISieve& sieveB, Renumbering& renumbering) {$/;"	f	class:FunctionTestIMesh
checkSieve	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  static void checkSieve(ISieve& sieveA, const ISieve& sieveB) {$/;"	f	class:FunctionTestISieve
checkSieve	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  static void checkSieve(ISieve& sieveA, const ISieve& sieveB, Renumbering& renumbering) {$/;"	f	class:FunctionTestISieve
checkSieve	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void checkSieve(Sieve& sieve, const ISieve& isieve, Renumbering& renumbering, bool orderedSupports) {$/;"	f	class:FunctionTestISieve
checkSignal	config/BuildSystem/config/types.py	/^  def checkSignal(self):$/;"	f
checkSignalHandlerType	config/BuildSystem/config/functions.py	/^  def checkSignalHandlerType(self):$/;"	f
checkSingleRun	config/builder2.py	/^def checkSingleRun(maker, ex, replace, extraArgs = '', isRegression = False):$/;"	f
checkSizeTypes	config/BuildSystem/config/types.py	/^  def checkSizeTypes(self):$/;"	f
checkSizeof	config/BuildSystem/config/types.py	/^  def checkSizeof(self, typeName, otherInclude = None):$/;"	f
checkSizeofVoidP	config/PETSc/packages/cuda.py	/^  def checkSizeofVoidP(self):$/;"	m	class:Configure
checkSourceDir	config/builder.py	/^  def checkSourceDir(self, dirname):$/;"	m	class:DirectoryTreeWalker
checkStat	config/BuildSystem/config/headers.py	/^  def checkStat(self):$/;"	m	class:Configure
checkStdC	config/BuildSystem/config/headers.py	/^  def checkStdC(self):$/;"	m	class:Configure
checkSysWait	config/BuildSystem/config/headers.py	/^  def checkSysWait(self):$/;"	f
checkSysinfo	config/BuildSystem/config/functions.py	/^  def checkSysinfo(self):$/;"	m	class:Configure
checkTag	config/BuildSystem/build/processor.py	/^  def checkTag(self, f, tag):$/;"	m	class:Processor
checkTestOutput	config/builder.py	/^ def checkTestOutput(self, testDir, executable, cmd, output, testNum, replace = False):$/;"	m	class:PETScMaker
checkThreads	config/BuildSystem/config/preTests.py	/^  def checkThreads(self):$/;"	m	class:Configure
checkThrustVersion	config/PETSc/packages/cuda.py	/^  def checkThrustVersion(self):$/;"	m	class:Configure
checkTime	config/BuildSystem/config/headers.py	/^  def checkTime(self):$/;"	f
checkTmpDir	config/BuildSystem/build/framework.py	/^  def checkTmpDir(self, tmpDir):$/;"	m	class:Framework
checkUID	config/BuildSystem/config/types.py	/^  def checkUID(self):$/;"	f
checkVFPrintf	config/BuildSystem/config/functions.py	/^  def checkVFPrintf(self):$/;"	f
checkVPrintf	config/BuildSystem/config/functions.py	/^  def checkVPrintf(self):$/;"	f
checkVSNPrintf	config/BuildSystem/config/functions.py	/^  def checkVSNPrintf(self):$/;"	f
checkValue	config/BuildSystem/sourceDatabase.py	/^  def checkValue(self, value):$/;"	m	class:SourceDB
checkVariableArgumentLists	config/BuildSystem/config/functions.py	/^  def checkVariableArgumentLists(self):$/;"	f
checkVendor	config/BuildSystem/config/setCompilers.py	/^  def checkVendor(self):$/;"	m	class:Configure
checkVisibility	config/BuildSystem/config/types.py	/^  def checkVisibility(self):$/;"	f
checkWorkingLink	config/BuildSystem/config/packages/PETSc.py	/^  def checkWorkingLink(self):$/;"	m	class:Configure
checkWorkingLink	config/PETSc/petsc.py	/^  def checkWorkingLink(self):$/;"	m	class:Configure
checkWrite	config/BuildSystem/logger.py	/^  def checkWrite(self, f, debugLevel, debugSection, writeAll = 0):$/;"	m	class:Logger
check__int64	config/BuildSystem/config/types.py	/^  def check__int64(self):$/;"	f
check_broken_configure_log_links	config/configure.py	/^def check_broken_configure_log_links():$/;"	f
check_for_option_changed	config/configure.py	/^def check_for_option_changed(opts):$/;"	f
check_for_option_mistakes	config/configure.py	/^def check_for_option_mistakes(opts):$/;"	f
check_petsc_arch	config/configure.py	/^def check_petsc_arch(opts):$/;"	f
check_siginfo_t	config/BuildSystem/config/types.py	/^  def check_siginfo_t(self):$/;"	f
checkinServer	config/BuildSystem/config/compile/SIDL.py	/^  def checkinServer(self, serverDirs):$/;"	m	class:Compiler
checkinServer	config/BuildSystem/maker.py	/^  def checkinServer(self, builder, sidlFile):$/;"	m	class:SIDLMake
checklsame	config/BuildSystem/config/packages/BlasLapack.py	/^  def checklsame(self):$/;"	m	class:Configure
checknullspaceonassembly	include/petsc-private/matimpl.h	/^  PetscBool              checksymmetryonassembly,checknullspaceonassembly;$/;"	m	struct:_p_Mat
checkresizedwindow	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*checkresizedwindow)(PetscDraw);$/;"	m	struct:_PetscDrawOps
checkstage	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*checkstage)(TSAdapt,TS,PetscBool*);$/;"	m	struct:_TSAdaptOps
checksymmetryonassembly	include/petsc-private/matimpl.h	/^  PetscBool              checksymmetryonassembly,checknullspaceonassembly;$/;"	m	struct:_p_Mat
checksymmetrytol	include/petsc-private/matimpl.h	/^  PetscReal              checksymmetrytol;$/;"	m	struct:_p_Mat
chk_sz	include/petscmat.h	/^  PetscInt     chk_sz;$/;"	m	struct:_PetscCoarsenData
chkbrokencygwin	config/configure.py	/^def chkbrokencygwin():$/;"	f
chkcygwinlink	config/configure.py	/^def chkcygwinlink():$/;"	f
chkcygwinpython	config/configure.py	/^def chkcygwinpython():$/;"	f
chkdosfiles	config/configure.py	/^def chkdosfiles():$/;"	f
chknorm	include/petsc-private/kspimpl.h	/^  PetscInt      chknorm;             \/* only compute\/check norm if iterations is great than this *\/$/;"	m	struct:_p_KSP
chkrhl9	config/configure.py	/^def chkrhl9():$/;"	f
chkwinf90	config/configure.py	/^def chkwinf90():$/;"	f
choice	bin/TOPSInstaller.py	/^		choice = choicebox(intro_message, "EasyGui " + EasyGuiRevisionInfo, choices)$/;"	v
choicebox	bin/TOPSInstaller.py	/^def choicebox(message="Pick something.", title=""$/;"	f
choices	bin/TOPSInstaller.py	/^			choices = ["Choice1", "Choice2", "Choice3", "Choice4"]$/;"	v
choices	bin/TOPSInstaller.py	/^		choices = [$/;"	v
choleskyfactor	include/petsc-private/matimpl.h	/^  PetscErrorCode (*choleskyfactor)(Mat,IS,const MatFactorInfo*);$/;"	m	struct:_MatOps
choleskyfactornumeric	include/petsc-private/matimpl.h	/^  PetscErrorCode (*choleskyfactornumeric)(Mat,Mat,const MatFactorInfo*);$/;"	m	struct:_MatOps
choleskyfactorsymbolic	include/petsc-private/matimpl.h	/^  PetscErrorCode (*choleskyfactorsymbolic)(Mat,Mat,IS,const MatFactorInfo*);$/;"	m	struct:_MatOps
choose	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*choose)(TSAdapt,TS,PetscReal,PetscInt*,PetscReal*,PetscBool*,PetscReal*);$/;"	m	struct:_TSAdaptOps
classHist	src/dm/impls/mesh/examples/tests/memoryParse.py	/^  classHist = {}$/;"	v
classInfo	include/petsclog.h	/^  PetscClassPerfInfo *classInfo; \/* The structure for class information (classids are monotonicly increasing) *\/$/;"	m	struct:_n_PetscClassPerfLog
classInfo	include/petsclog.h	/^  PetscClassRegInfo *classInfo; \/* The structure for class information (classids are monotonicly increasing) *\/$/;"	m	struct:_n_PetscClassRegLog
classLog	include/petsclog.h	/^  PetscClassPerfLog  classLog;  \/* The class information for this stage *\/$/;"	m	struct:_PetscStageInfo
classLog	include/petsclog.h	/^  PetscClassRegLog classLog;    \/* The registered classes *\/$/;"	m	struct:_n_PetscStageLog
className	include/sieve/ALE_mem.hh	/^    const char *className;$/;"	m	class:ALE::malloc_allocator
classOutput	src/dm/impls/mesh/examples/tests/memoryParse.py	/^  classOutput = []$/;"	v
class_name	include/petsc-private/petscimpl.h	/^  char                 *class_name;    \/*  for example, "Vec" *\/$/;"	m	struct:_p_PetscObject
classid	include/petsc-private/logimpl.h	/^  PetscClassId   classid;        \/* The event class id *\/$/;"	m	struct:_Action
classid	include/petsc-private/petscimpl.h	/^  PetscClassId         classid;$/;"	m	struct:_p_PetscObject
classid	include/petsclog.h	/^  PetscClassId   classid; \/* The integer identifying this class *\/$/;"	m	struct:__anon62
classid	include/petsclog.h	/^  PetscClassId classid;       \/* The class the event is associated with *\/$/;"	m	struct:__anon64
classifyIncludes	config/BuildSystem/maker.py	/^  def classifyIncludes(self, incList):$/;"	m	class:BasicMake
classifySource	config/BuildSystem/maker.py	/^  def classifySource(self, srcList):$/;"	m	class:BasicMake
clean	config/BuildSystem/regression/buildtest.py	/^  def clean(self):$/;"	m	class:RemoteBuild
clean	config/builder.py	/^ def clean(self, libname):$/;"	m	class:PETScMaker
clean	config/builder2.py	/^def clean(args):$/;"	f
cleanlib	config/PETSc/Configure.py	/^    def cleanlib(lib):$/;"	f	function:Configure.dumpCMakeConfig
cleanup	config/BuildSystem/args.py	/^  def cleanup(self):$/;"	m	class:ArgumentProcessor
cleanup	config/BuildSystem/config/framework.py	/^  def cleanup(self):$/;"	m	class:Framework
cleanup	config/BuildSystem/script.py	/^  def cleanup(self):$/;"	m	class:Script
cleanup	config/builder.py	/^ def cleanup(self):$/;"	m	class:PETScMaker
cleanupLog	config/builder.py	/^ def cleanupLog(self, framework, confDir):$/;"	m	class:PETScMaker
cleanupTest	config/builder.py	/^ def cleanupTest(self, dirname, execname):$/;"	m	class:PETScMaker
clear	config/BuildSystem/RDict.py	/^  def clear(self):$/;"	m	class:RDict
clear	config/BuildSystem/config/setsBackport.py	/^    def clear(self):$/;"	m	class:Set
clear	config/BuildSystem/config/setsOrdered.py	/^    def clear(self):$/;"	m	class:Set
clear	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*clear)(PetscDraw);$/;"	m	struct:_PetscDrawOps
clear	include/sieve/CartesianSieve.hh	/^      void clear() {$/;"	f	class:ALE::CartesianBundle
clear	include/sieve/Field.hh	/^    void clear() {$/;"	f	class:ALE::ConstantSection
clear	include/sieve/Field.hh	/^    void clear() {$/;"	f	class:ALE::FEMSection
clear	include/sieve/Field.hh	/^    void clear() {$/;"	f	class:ALE::FauxConstantSection
clear	include/sieve/Field.hh	/^    void clear() {$/;"	f	class:ALE::Field
clear	include/sieve/Field.hh	/^    void clear() {$/;"	f	class:ALE::GeneralSection
clear	include/sieve/Field.hh	/^    void clear() {$/;"	f	class:ALE::NewUniformSection
clear	include/sieve/Field.hh	/^    void clear() {$/;"	f	class:ALE::Section
clear	include/sieve/Field.hh	/^    void clear() {$/;"	f	class:ALE::UniformSection
clear	include/sieve/IField.hh	/^    void clear() {$/;"	f	class:ALE::IUniformSection
clear	include/sieve/IField.hh	/^    void clear() {};$/;"	f	class:ALE::IConstantSection
clear	include/sieve/INumbering.hh	/^    void clear() {$/;"	f	class:ALE::INumberingFactory
clear	include/sieve/ISieve.hh	/^      void clear() {$/;"	f	class:ALE::ISieveVisitor::IndicesVisitor
clear	include/sieve/ISieve.hh	/^      void clear() {$/;"	f	class:ALE::ISieveVisitor::UpdateVecVisitor
clear	include/sieve/ISieve.hh	/^      void clear() {this->i = 0; if (processed) {processed = false;}};$/;"	f	class:ALE::ISieveVisitor::RestrictVecVisitor
clear	include/sieve/ISieve.hh	/^      void clear() {this->i = 0; this->o = 0;}$/;"	f	class:ALE::ISieveVisitor::FilteredPointRetriever
clear	include/sieve/ISieve.hh	/^      void clear() {this->i = 0; this->p = 0;};$/;"	f	class:ALE::ISieveVisitor::IndicesVisitor
clear	include/sieve/ISieve.hh	/^      void clear() {this->i = 0;};$/;"	f	class:ALE::ISieveVisitor::RestrictVisitor
clear	include/sieve/ISieve.hh	/^      void clear() {this->i = 0;};$/;"	f	class:ALE::ISieveVisitor::UpdateAddVisitor
clear	include/sieve/ISieve.hh	/^      void clear() {this->i = 0;};$/;"	f	class:ALE::ISieveVisitor::UpdateAllVisitor
clear	include/sieve/ISieve.hh	/^      void clear() {this->i = 0;};$/;"	f	class:ALE::ISieveVisitor::UpdateVisitor
clear	include/sieve/ISieve.hh	/^      void clear() {this->i = this->o = 0;}$/;"	f	class:ALE::ISieveVisitor::ArrowRetriever
clear	include/sieve/ISieve.hh	/^      void clear() {this->i = this->o = 0;}$/;"	f	class:ALE::ISieveVisitor::PointRetriever
clear	include/sieve/ISieve.hh	/^      void clear() {this->seen.clear();};$/;"	f	class:ALE::ISieveVisitor::TransitiveClosureVisitor
clear	include/sieve/LabelSifter.hh	/^    void clear() {$/;"	f	class:ALE::LabelSifter
clear	include/sieve/Mesh.hh	/^      void clear() {this->modifiedPoints.clear();};$/;"	f	class:ALE::IBundle::DepthVisitor
clear	include/sieve/Mesh.hh	/^      void clear() {this->modifiedPoints.clear();};$/;"	f	class:ALE::IBundle::HeightVisitor
clear	include/sieve/Numbering.hh	/^    void clear() {$/;"	f	class:ALE::NumberingFactory
clear	include/sieve/ParallelMapping.hh	/^    void clear() {$/;"	f	class:ALE::PointFactory
clear	include/sieve/Sifter.hh	/^    void clear() {$/;"	f	class:ALE::ASifter
clear	include/sieve/Topology.hh	/^    void clear() {$/;"	f	class:ALE::Topology
clearCone	include/sieve/LabelSifter.hh	/^    void clearCone(const typename traits::target_type& t) {$/;"	f	class:ALE::LabelSifter
clearCone	include/sieve/Sifter.hh	/^    void clearCone(const typename traits::target_type& t) {$/;"	f	class:ALE::ASifter
clearCone	include/sieve/Sifter.hh	/^    void clearCone(const typename traits::target_type& t, const typename traits::color_type&  color, bool useColor = true) {$/;"	f	class:ALE::ASifter
clearEdges	config/BuildSystem/build/buildGraph.py	/^  def clearEdges(self, vertex, inOnly = 0, outOnly = 0):$/;"	m	class:BuildGraph
clearEdges	config/BuildSystem/graph.py	/^  def clearEdges(self, vertex, inOnly = 0, outOnly = 0):$/;"	m	class:DirectedGraph
clearMarkers	include/sieve/Sieve.hh	/^      void clearMarkers() {this->_markers.clear();};$/;"	f	class:ALE::Sieve
clearSource	config/BuildSystem/sourceDatabase.py	/^  def clearSource(self, source):$/;"	m	class:SourceDB
clearSupport	include/sieve/LabelSifter.hh	/^    void clearSupport(const typename traits::source_type& s) {$/;"	f	class:ALE::LabelSifter
clearSupport	include/sieve/Sifter.hh	/^    void clearSupport(const typename traits::source_type& s) {$/;"	f	class:ALE::ASifter
clearSupport	include/sieve/Sifter.hh	/^    void clearSupport(const typename traits::source_type& s, const typename traits::color_type&  color, bool useColor = true) {$/;"	f	class:ALE::ASifter
clientLanguages	config/BuildSystem/maker.py	/^  clientLanguages = property(getClientLanguages, setClientLanguages, doc = 'The list of client languages')$/;"	v	class:SIDLMake
clone	config/BuildSystem/build/fileset.py	/^  def clone(self):$/;"	m	class:FileSet
clone	config/BuildSystem/build/fileset.py	/^  def clone(self):$/;"	m	class:RootedFileSet
clone	config/BuildSystem/sourceControl.py	/^  def clone(self, parent, child):$/;"	m	class:BitKeeper
clone	config/BuildSystem/sourceControl.py	/^  def clone(self, parent, child):$/;"	m	class:VersionControl
close	include/petscdmmesh_formats.hh	/^      bool close() {return state == DONE;};$/;"	f	class:ALE::Dolfin::XMLMesh
close	include/petscdmmesh_formats.hh	/^      virtual bool close() {return true;};$/;"	f	class:ALE::Dolfin::XMLObject
closeLog	config/BuildSystem/logger.py	/^  def closeLog(self):$/;"	m	class:Logger
closure	include/sieve/CartesianSieve.hh	/^    Obj<coneSequence> closure(const point_type& p) {$/;"	f	class:ALE::CartesianSieve
closure	include/sieve/Field.hh	/^    const Obj<coneArray>& closure(const point_type& p) {$/;"	f	class:ALE::DiscreteSieve
closure	include/sieve/SieveAlgorithms.hh	/^    static Obj<coneArray> closure(const Bundle_ *bundle, const Obj<arrow_section_type>& orientation, const point_type& p) {$/;"	f	class:ALE::SieveAlg
closure	include/sieve/SieveAlgorithms.hh	/^    static Obj<coneArray> closure(const Obj<bundle_type>& bundle, const point_type& p) {$/;"	f	class:ALE::SieveAlg
closure1	include/sieve/Mesh.hh	/^    void closure1(const Sieve& sieve, const point_type& p, Visitor& v)$/;"	f	class:ALE::IMesh
closureTmpA	include/petsc-private/meshimpl.h	/^  PetscInt            *closureTmpA, *closureTmpB; \/* Work space for closure operation *\/$/;"	m	struct:__anon16
closureTmpB	include/petsc-private/meshimpl.h	/^  PetscInt            *closureTmpA, *closureTmpB; \/* Work space for closure operation *\/$/;"	m	struct:__anon16
cmakeBoot	config/PETSc/Configure.py	/^  def cmakeBoot(self):$/;"	m	class:Configure
cmakeboot	config/PETSc/Configure.py	/^        import cmakeboot$/;"	i
cmakeboot	config/cmakeboot.py	/^ def cmakeboot(self, args, log):$/;"	m	class:PETScMaker
cmakeconditional	config/cmakegen.py	/^def cmakeconditional(key,val):$/;"	f
cmakeexpand	config/PETSc/Configure.py	/^    def cmakeexpand(varname):$/;"	f	function:Configure.dumpCMakeConfig
cmakegen	config/PETSc/Configure.py	/^      import cmakegen$/;"	i
cmakeset	config/PETSc/Configure.py	/^    def cmakeset(fd,key,val=True):$/;"	f	function:Configure.dumpCMakeConfig
cmap	include/petsc-private/matimpl.h	/^  PetscLayout            rmap,cmap;$/;"	m	struct:_p_Mat
cmd	bin/taucc.py	/^  cmd = 'make -f '+ name + ' tauflags'$/;"	v
cnvP	include/petsc-private/kspimpl.h	/^  void       *cnvP;$/;"	m	struct:_p_KSP
cnvP	include/petsc-private/snesimpl.h	/^  void                *cnvP;                                                      \/* convergence context *\/$/;"	m	struct:_p_SNES
coarseFactor	src/dm/impls/mesh/examples/tutorials/ex_coarsen.c	/^  PetscReal coarseFactor;        \/\/ The maximum coarsening factor$/;"	m	struct:__anon7	file:
coarseFactor	src/dm/impls/mesh/examples/tutorials/ex_coarsen_2.c	/^  PetscReal coarseFactor;        \/\/ The maximum coarsening factor$/;"	m	struct:__anon8	file:
coarseFactor	src/dm/impls/mesh/examples/tutorials/ex_coarsen_3.c	/^  PetscReal coarseFactor;        \/\/ The maximum coarsening factor$/;"	m	struct:__anon1	file:
coarsen	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*coarsen)(DM,MPI_Comm,DM*);$/;"	m	struct:_DMOps
coarsen_CollectStats	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^void coarsen_CollectStats(bool stats, bool display)$/;"	f	namespace:ALE::Coarsener
coarsen_DisplayStats	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^void coarsen_DisplayStats()$/;"	f	namespace:ALE::Coarsener
coarsen_Stats	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^struct coarsen_Stats {$/;"	s	namespace:ALE::Coarsener
coarsen_stats	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^} coarsen_stats;$/;"	m	namespace:ALE::Coarsener	typeref:struct:ALE::Coarsener::coarsen_Stats
coarsen_x	include/petsc-private/dmdaimpl.h	/^  PetscInt              coarsen_x,coarsen_y,coarsen_z; \/* ratio used for coarsening *\/$/;"	m	struct:__anon23
coarsen_y	include/petsc-private/dmdaimpl.h	/^  PetscInt              coarsen_x,coarsen_y,coarsen_z; \/* ratio used for coarsening *\/$/;"	m	struct:__anon23
coarsen_z	include/petsc-private/dmdaimpl.h	/^  PetscInt              coarsen_x,coarsen_y,coarsen_z; \/* ratio used for coarsening *\/$/;"	m	struct:__anon23
coarsenhierarchy	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*coarsenhierarchy)(DM,PetscInt,DM*);$/;"	m	struct:_DMOps
coarsenhook	include/petsc-private/dmimpl.h	/^  DMCoarsenHookLink       coarsenhook; \/* For transfering auxiliary problem data to coarser grids *\/$/;"	m	struct:_p_DM
coarsenhook	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*coarsenhook)(DM,DM,void*);              \/* Run once, when coarse DM is created *\/$/;"	m	struct:_DMCoarsenHookLink
codebox	bin/TOPSInstaller.py	/^def codebox(message="", title="", text=""):$/;"	f
coef	include/petsc-private/kspimpl.h	/^  PetscReal coef;$/;"	m	struct:__anon20
collectDefines	config/builder.py	/^  def collectDefines(self):$/;"	m	class:DirectoryTreeWalker
color	include/petscsys.h	/^  PetscInt   color;       \/* color of processors belong to this communicator *\/$/;"	m	struct:_n_PetscSubcomm
color	include/sieve/ALE_containers.hh	/^    color_type  color;$/;"	m	struct:ALE::Arrow
color	include/sieve/Overlap.hh	/^    virtual const color_type color() const     {return *remotePoints;};$/;"	f	class:PETSc::DualSequence::iterator
color	include/sieve/Sifter.hh	/^          virtual const color_type&  color()  const {return this->_itor->color;};$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence::iterator
color	include/sieve/Sifter.hh	/^          virtual const color_type&  color()  const {return this->_itor->color;};$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence::reverse_iterator
color	include/sieve/Sifter.hh	/^      color_type  color;$/;"	m	struct:ALE::SifterDef::Arrow
color	src/dm/impls/mesh/examples/tests/ex00.c	/^struct color {};$/;"	s	file:
color_type	include/sieve/ALE_containers.hh	/^    typedef Color_  color_type;$/;"	t	struct:ALE::Arrow
color_type	include/sieve/Overlap.hh	/^    typedef second_type color_type;$/;"	t	class:PETSc::DualSequence::iterator
color_type	include/sieve/Overlap.hh	/^  typedef point_type color_type;$/;"	t	class:PETSc::RecvOverlap
color_type	include/sieve/Overlap.hh	/^  typedef point_type color_type;$/;"	t	class:PETSc::SendOverlap
color_type	include/sieve/Sieve.hh	/^        typedef typename baseType::traits::color_type           color_type;$/;"	t	struct:ALE::Sieve::__anon9
color_type	include/sieve/Sieve.hh	/^      typedef Color_  color_type;$/;"	t	class:ALE::Sieve
color_type	include/sieve/Sifter.hh	/^      typedef Color_  color_type;$/;"	t	struct:ALE::SifterDef::Arrow
color_type	include/sieve/Sifter.hh	/^      typedef typename arrow_container_type::traits::color_type                      color_type;$/;"	t	struct:ALE::ASifter::__anon2
color_type	include/sieve/Sifter.hh	/^      typedef typename arrow_type::color_type  color_type;$/;"	t	struct:ALE::SifterDef::ArrowContainerTraits
color_type	include/sieve/Sifter.hh	/^    typedef typename traits::color_type                                             color_type;$/;"	t	class:ALE::Sifter
colorforcol	include/petsc-private/matimpl.h	/^  PetscInt       *colorforrow,*colorforcol;  \/* pointer to rows and columns *\/$/;"	m	struct:_p_MatTransposeColoring
colorforrow	include/petsc-private/matimpl.h	/^  PetscInt       *colorforrow,*colorforcol;  \/* pointer to rows and columns *\/$/;"	m	struct:_p_MatTransposeColoring
coloringpatch	include/petsc-private/matimpl.h	/^  PetscErrorCode (*coloringpatch)(Mat,PetscInt,PetscInt,ISColoringValue[],ISColoring*);$/;"	m	struct:_MatOps
coloringtype	include/petsc-private/dmimpl.h	/^  ISColoringType          coloringtype;$/;"	m	struct:_p_DM
colors	include/petscis.h	/^  ISColoringValue *colors;          \/* for each column indicates color *\/$/;"	m	struct:_n_ISColoring
columns	include/petsc-private/matimpl.h	/^  PetscInt       **columns;        \/* lists the local columns of each color (using global column numbering) *\/$/;"	m	struct:_p_MatFDColoring
columns	include/petsc-private/matimpl.h	/^  PetscInt       *columns;               \/* lists the local columns of each color (using global column numbering) *\/$/;"	m	struct:_p_MatTransposeColoring
columnsforrow	include/petsc-private/matimpl.h	/^  PetscInt       **columnsforrow;  \/* lists the corresponding columns for those rows (using the global column) *\/$/;"	m	struct:_p_MatFDColoring
columnsforspidx	include/petsc-private/matimpl.h	/^  PetscInt       *columnsforspidx;       \/* maps (row,color) in the dense matrix to index of sparse matrix arrays a->j and a->a *\/$/;"	m	struct:_p_MatTransposeColoring
comm	include/petsc-private/isimpl.h	/^  MPI_Comm comm;$/;"	m	struct:_n_PetscUniformSection
comm	include/petsc-private/matimpl.h	/^  MPI_Comm      comm;$/;"	m	struct:__anon1
comm	include/petsc-private/petscimpl.h	/^  MPI_Comm             comm;$/;"	m	struct:_p_PetscObject
comm	include/petsc-private/vecimpl.h	/^  MPI_Comm      comm;$/;"	m	struct:__anon24
comm	include/petscdm.h	/^  MPI_Comm   comm;$/;"	m	struct:_DMInterpolationInfo
comm	include/petscis.h	/^  MPI_Comm               comm;$/;"	m	struct:_n_PetscLayout
comm	include/petscis.h	/^  MPI_Comm        comm;$/;"	m	struct:_n_ISColoring
comm	include/petscoptions.h	/^  MPI_Comm         comm;$/;"	m	struct:__anon35
comm	include/petscsys.h	/^  MPI_Comm   comm;        \/* this communicator *\/$/;"	m	struct:_n_PetscSubcomm
comm	include/sieve/ALE_containers.hh	/^    MPI_Comm           comm()     const {return this->_comm;};$/;"	f	class:ALE::ParallelObject
comm	include/sieve/ALE_mem.hh	/^    MPI_Comm comm() {return _comm;};$/;"	f	class:ALE::MemoryLogger
comm	include/sieve/LabelSifter.hh	/^    MPI_Comm    comm()     const {return this->_comm;};$/;"	f	class:ALE::LabelSifter
comm	include/sieve/Sifter.hh	/^    MPI_Comm    comm()     const {return this->_comm;};$/;"	f	class:ALE::ASifter
comm	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^  MPI_Comm   comm;$/;"	m	struct:__anon14	file:
commRank	include/sieve/ALE_containers.hh	/^    int                commRank() const {return this->_commRank;}$/;"	f	class:ALE::ParallelObject
commRank	include/sieve/LabelSifter.hh	/^    int         commRank() const {return this->_commRank;}$/;"	f	class:ALE::LabelSifter
commRank	include/sieve/Sifter.hh	/^    int         commRank() const {return this->_commRank;}$/;"	f	class:ALE::ASifter
commSize	include/petsc-private/dmpatchimpl.h	/^  MatStencil commSize;$/;"	m	struct:__anon10
commSize	include/sieve/ALE_containers.hh	/^    int                commSize() const {return this->_commSize;};$/;"	f	class:ALE::ParallelObject
commSize	include/sieve/LabelSifter.hh	/^    int         commSize() const {return this->_commSize;};$/;"	f	class:ALE::LabelSifter
commSize	include/sieve/Sifter.hh	/^    int         commSize() const {return this->_commSize;};$/;"	f	class:ALE::ASifter
commands	bin/TOPSGenerator.py	/^        import commands$/;"	i
commands	bin/TOPSInstaller.py	/^          import commands$/;"	i
commands	bin/taucc.py	/^import commands$/;"	i
commands	bin/update.py	/^import commands$/;"	i
commands	config/BuildSystem/build/compile/Cxx.py	/^      import commands$/;"	i
commands	config/BuildSystem/build/framework.py	/^      import commands$/;"	i
commands	config/BuildSystem/config/packages/BlasLapack.py	/^          import commands$/;"	i
commands	config/BuildSystem/emacsclient.py	/^import commands$/;"	i
commands	config/BuildSystem/getsplicers.py	/^import commands$/;"	i
commands	config/configure.py	/^import commands$/;"	i
commit	config/BuildSystem/sourceControl.py	/^  def commit(self, files):$/;"	m	class:BitKeeper
commit	config/BuildSystem/sourceControl.py	/^  def commit(self, files):$/;"	m	class:VersionControl
compPpoint	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^  double * compPpoint; \/\/average number of comparisons per point.$/;"	m	struct:ALE::Coarsener::coarsen_Stats
compare	config/BuildSystem/build/fileState.py	/^  def compare(self, source, sourceEntry):$/;"	m	class:FileChanged
compareDirLists	config/cmakegen.py	/^  def compareDirLists(mdirs,dirs):$/;"	f	function:pkgsources
compareSourceLists	config/cmakegen.py	/^  def compareSourceLists(msources, files):$/;"	f	function:pkgsources
compile	config/BuildSystem/build/framework.py	/^    import build.compile.SIDL$/;"	i
compile	config/BuildSystem/build/templates/Compile.py	/^    import build.compile.SIDL$/;"	i
compile	config/BuildSystem/build/templates/SIDL.py	/^import build.compile.SIDL$/;"	i
compile	config/BuildSystem/build/templates/usingCxx.py	/^    import build.compile.C$/;"	i
compile	config/BuildSystem/build/templates/usingCxx.py	/^    import build.compile.Cxx$/;"	i
compile	config/BuildSystem/build/templates/usingPython.py	/^    import build.compile.C$/;"	i
compile	config/BuildSystem/build/templates/usingSIDL.py	/^    import build.compile.SIDL$/;"	i
compile	config/BuildSystem/config/compile/C.py	/^import config.compile.processor$/;"	i
compile	config/BuildSystem/config/compile/CUDA.py	/^import config.compile.C$/;"	i
compile	config/BuildSystem/config/compile/CUDA.py	/^import config.compile.processor$/;"	i
compile	config/BuildSystem/config/compile/Cxx.py	/^import config.compile.processor$/;"	i
compile	config/BuildSystem/config/compile/FC.py	/^import config.compile.C$/;"	i
compile	config/BuildSystem/config/compile/FC.py	/^import config.compile.processor$/;"	i
compile	config/builder.py	/^ def compile(self, language, source, objDir = None):$/;"	m	class:PETScMaker
compileC	config/builder.py	/^ def compileC(self, source, objDir = None):$/;"	m	class:PETScMaker
compileCParallel	config/builder.py	/^ def compileCParallel(self, source, objDir = None):$/;"	m	class:PETScMaker
compileCUDA	config/builder.py	/^ def compileCUDA(self, source, objDir = None):$/;"	m	class:PETScMaker
compileCxx	config/builder.py	/^ def compileCxx(self, source, objDir = None):$/;"	m	class:PETScMaker
compileCxxParallel	config/builder.py	/^ def compileCxxParallel(self, source, objDir = None):$/;"	m	class:PETScMaker
compileFortran	config/builder.py	/^ def compileFortran(self, source, objDir = None):$/;"	m	class:PETScMaker
compileFortranParallel	config/builder.py	/^ def compileFortranParallel(self, source, objDir = None):$/;"	m	class:PETScMaker
compileParallel	config/builder.py	/^ def compileParallel(self, language, source, objDir = None):$/;"	m	class:PETScMaker
compileTemplate	config/BuildSystem/build/framework.py	/^  compileTemplate = property(getCompileTemplate, doc = 'This is the default template for source operations')$/;"	v	class:Framework
compilers	config/BuildSystem/script.py	/^  compilers = property(getCompilers, doc = 'The config.compilers configure object')$/;"	v	class:LanguageProcessor
complement	include/petsc-private/isimpl.h	/^  IS           complement;          \/* IS wrapping nonlocal indices. *\/$/;"	m	struct:_p_IS
completeBaseV	include/sieve/Distribution.hh	/^    static void completeBaseV(const Obj<Mesh>& mesh, const Obj<partition_type>& partition, Renumbering& renumbering, const Obj<NewMesh>& newMesh, const Obj<SendOverlap>& sendMeshOverlap, const Obj<RecvOverlap>& recvMeshOverlap) {$/;"	f	class:ALE::DistributionNew
completeCones	include/sieve/Distribution.hh	/^    static Obj<cones_type> completeCones(const Obj<Sieve>& sieve, const Obj<NewSieve>& newSieve, Renumbering& renumbering, const Obj<SendOverlap>& sendMeshOverlap, const Obj<RecvOverlap>& recvMeshOverlap) {$/;"	f	class:ALE::DistributionNew
completeConesV	include/sieve/Distribution.hh	/^    static Obj<oriented_cones_type> completeConesV(const Obj<Sieve>& sieve, const Obj<NewSieve>& newSieve, Renumbering& renumbering, const Obj<SendOverlap>& sendMeshOverlap, const Obj<RecvOverlap>& recvMeshOverlap) {$/;"	f	class:ALE::DistributionNew
completeConesV	include/sieve/Distribution.hh	/^    static Obj<oriented_cones_type> completeConesV(const Obj<Sieve>& sieve, const Obj<NewSieve>& newSieve, const Obj<SendOverlap>& sendMeshOverlap, const Obj<RecvOverlap>& recvMeshOverlap) {$/;"	f	class:ALE::DistributionNew
completeMesh	include/sieve/Distribution.hh	/^    static void completeMesh(const Obj<Mesh>& mesh, const Obj<partition_type>& partition, Renumbering& renumbering, const Obj<NewMesh>& newMesh, const Obj<SendOverlap>& sendMeshOverlap, const Obj<RecvOverlap>& recvMeshOverlap) {$/;"	f	class:ALE::DistributionNew
completeNumbering	include/sieve/INumbering.hh	/^    void completeNumbering(const Obj<numbering_type>& numbering, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap, bool allowDuplicates = false) {$/;"	f	class:ALE::INumberingFactory
completeNumbering	include/sieve/Numbering.hh	/^    void completeNumbering(const Obj<numbering_type>& numbering, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap, bool allowDuplicates = false) {$/;"	f	class:ALE::NumberingFactory
completeOrder	include/sieve/INumbering.hh	/^    void completeOrder(const Obj<order_type>& order, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap, bool allowDuplicates = false) {$/;"	f	class:ALE::INumberingFactory
completeOrder	include/sieve/Numbering.hh	/^    void completeOrder(const Obj<order_type>& order, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap, bool allowDuplicates = false) {$/;"	f	class:ALE::NumberingFactory
completeSection	include/sieve/Completion.hh	/^    static void completeSection(const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<SendSection>& sendSection, const Obj<RecvSection>& recvSection) {$/;"	f	class:ALE::Completion
completeSection	include/sieve/Distribution.hh	/^    static void completeSection(const Obj<bundle_type>& bundle, const Obj<Section>& section) {$/;"	f	class:ALE::Distribution
completeSection	include/sieve/SectionCompletion.hh	/^      static void completeSection(const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<SizerFiller>& sizerFiller, const Filler& filler, const Obj<SendSection>& sendSection, const Obj<RecvSection>& recvSection) {$/;"	f	class:ALE::New::SectionCompletion
completeSectionAdd	include/sieve/Completion.hh	/^    static void completeSectionAdd(const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<SendSection>& sendSection, const Obj<RecvSection>& recvSection) {$/;"	f	class:ALE::Completion
completeSectionAdd	include/sieve/Completion.hh	/^    static void completeSectionAdd(const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<SendSection>& sendSection, const Obj<RecvSection>& recvSection, const Obj<OverlapSection>& overlapSection) {$/;"	f	class:ALE::Completion
completion	include/sieve/Completion.hh	/^      typedef typename ALE::New::SectionCompletion<bundle_type, value_type, alloc_type>   completion;$/;"	t	class:ALE::New::Completion
completion	include/sieve/SectionCompletion.hh	/^      typedef typename ALE::New::SectionCompletion<mesh_topology_type, value_type, alloc_type> completion;$/;"	t	class:ALE::New::SectionCompletion
complexlib	include/petscmath.h	70;"	d
complexlib	include/petscmath.h	73;"	d
components	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^  components = int(sys.argv[n*5+3])$/;"	v
components	bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py	/^  components = int(sys.argv[n*5+3])$/;"	v
components	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^  PetscInt   components;  \/\/ Number of section components$/;"	m	struct:__anon14	file:
components	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^  PetscInt   components;  \/\/ Number of section components$/;"	m	struct:__anon5	file:
compose	include/petsc-private/petscimpl.h	/^   PetscErrorCode (*compose)(PetscObject,const char[],PetscObject);$/;"	m	struct:__anon11
composefunction	include/petsc-private/petscimpl.h	/^   PetscErrorCode (*composefunction)(PetscObject,const char[],void (*)(void));$/;"	m	struct:__anon11
compressed	bin/urlget.py	/^def compressed(filename):$/;"	f
computeBdElementGeometry	include/sieve/Mesh.hh	/^    void computeBdElementGeometry(const Obj<real_section_type>& coordinates, const point_type& e, typename real_section_type::value_type v0[], typename real_section_type::value_type J[], typename real_section_type::value_type invJ[], typename real_section_type::value_type& detJ) {$/;"	f	class:ALE::IMesh
computeBdSegmentGeometry	include/sieve/Mesh.hh	/^    void computeBdSegmentGeometry(const Obj<real_section_type>& coordinates, const point_type& e, typename real_section_type::value_type v0[], typename real_section_type::value_type J[], typename real_section_type::value_type invJ[], typename real_section_type::value_type& detJ) {$/;"	f	class:ALE::IMesh
computeBinaryStratification	include/sieve/Mesh.hh	/^    void computeBinaryStratification() {$/;"	f	class:ALE::IBundle
computeDepth	include/sieve/Mesh.hh	/^    void computeDepth(const Obj<label_type>& depth, const Obj<sieve_type>& sieve, const Obj<InputPoints>& points, int& maxDepth) {$/;"	f	class:ALE::Bundle
computeDepth	include/sieve/Topology.hh	/^    void computeDepth(const Obj<patch_label_type>& depth, const Obj<sieve_type>& sieve, const Obj<InputPoints>& points, int& maxDepth) {$/;"	f	class:ALE::Topology
computeDepths	include/sieve/Mesh.hh	/^    void computeDepths() {$/;"	f	class:ALE::Bundle
computeDepths	include/sieve/Mesh.hh	/^    void computeDepths() {$/;"	f	class:ALE::IBundle
computeDepths	include/sieve/Topology.hh	/^    void computeDepths() {$/;"	f	class:ALE::Topology
computeElementGeometry	include/sieve/CartesianSieve.hh	/^    void computeElementGeometry(const Obj<real_section_type>& coordinates, const point_type& e, double v0[], double J[], double invJ[], double& detJ) {$/;"	f	class:ALE::CartesianMesh
computeElementGeometry	include/sieve/Mesh.hh	/^    void computeElementGeometry(const Obj<real_section_type>& coordinates, const point_type& e, double v0[], double J[], double invJ[], double& detJ) {$/;"	f	class:ALE::Mesh
computeElementGeometry	include/sieve/Mesh.hh	/^    void computeElementGeometry(const Obj<real_section_type>& coordinates, const point_type& e, typename real_section_type::value_type v0[], typename real_section_type::value_type J[], typename real_section_type::value_type invJ[], typename real_section_type::value_type& detJ) {$/;"	f	class:ALE::IMesh
computeFaceGeometry	include/sieve/Mesh.hh	/^    void computeFaceGeometry(const point_type& cell, const point_type& face, const int f, const double cellInvJ[], double invJ[], double& detJ, double normal[], double tangent[]) {$/;"	f	class:ALE::Mesh
computeHeight	include/sieve/Mesh.hh	/^    void computeHeight(const Obj<label_type>& height, const Obj<sieve_type>& sieve, const Obj<InputPoints>& points, int& maxHeight) {$/;"	f	class:ALE::Bundle
computeHeight	include/sieve/Topology.hh	/^    void computeHeight(const Obj<patch_label_type>& height, const Obj<sieve_type>& sieve, const Obj<InputPoints>& points, int& maxHeight) {$/;"	f	class:ALE::Topology
computeHeights	include/sieve/Mesh.hh	/^    void computeHeights() {$/;"	f	class:ALE::Bundle
computeHeights	include/sieve/Mesh.hh	/^    void computeHeights() {$/;"	f	class:ALE::IBundle
computeHeights	include/sieve/Topology.hh	/^    void computeHeights() {$/;"	f	class:ALE::Topology
computeHexahedralGeometry	include/sieve/Mesh.hh	/^    void computeHexahedralGeometry(const Obj<real_section_type>& coordinates, const point_type& e, double point[], double v0[], double J[], double invJ[], double& detJ) {$/;"	f	class:ALE::Mesh
computeHexahedronGeometry	include/sieve/Mesh.hh	/^    void computeHexahedronGeometry(const Obj<real_section_type>& coordinates, const point_type& e, typename real_section_type::value_type v0[], typename real_section_type::value_type J[], typename real_section_type::value_type invJ[], typename real_section_type::value_type& detJ) {$/;"	f	class:ALE::IMesh
computeLineFaceGeometry	include/sieve/Mesh.hh	/^    void computeLineFaceGeometry(const point_type& cell, const point_type& face, const int f, const double cellInvJ[], double invJ[], double& detJ, double normal[], double tangent[]) {$/;"	f	class:ALE::Mesh
computeQuadrilateralGeometry	include/sieve/Mesh.hh	/^    void computeQuadrilateralGeometry(const Obj<real_section_type>& coordinates, const point_type& e, double point[], double v0[], double J[], double invJ[], double& detJ) {$/;"	f	class:ALE::Mesh
computeRectangleGeometry	include/sieve/Mesh.hh	/^    void computeRectangleGeometry(const Obj<real_section_type>& coordinates, const point_type& e, typename real_section_type::value_type v0[], typename real_section_type::value_type J[], typename real_section_type::value_type invJ[], typename real_section_type::value_type& detJ) {$/;"	f	class:ALE::IMesh
computeStats	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^  bool computeStats; \/\/tell if to compute stats$/;"	m	struct:ALE::Coarsener::coarsen_Stats
computeTetrahedronGeometry	include/sieve/Mesh.hh	/^    void computeTetrahedronGeometry(const Obj<real_section_type>& coordinates, const point_type& e, double v0[], double J[], double invJ[], double& detJ) {$/;"	f	class:ALE::Mesh
computeTetrahedronGeometry	include/sieve/Mesh.hh	/^    void computeTetrahedronGeometry(const Obj<real_section_type>& coordinates, const point_type& e, typename real_section_type::value_type v0[], typename real_section_type::value_type J[], typename real_section_type::value_type invJ[], typename real_section_type::value_type& detJ) {$/;"	f	class:ALE::IMesh
computeTriangleFaceGeometry	include/sieve/Mesh.hh	/^    void computeTriangleFaceGeometry(const point_type& cell, const point_type& face, const int f, const double cellInvJ[], double invJ[], double& detJ, double normal[], double tangent[]) {$/;"	f	class:ALE::Mesh
computeTriangleGeometry	include/sieve/Mesh.hh	/^    void computeTriangleGeometry(const Obj<real_section_type>& coordinates, const point_type& e, double v0[], double J[], double invJ[], double& detJ) {$/;"	f	class:ALE::Mesh
computeTriangleGeometry	include/sieve/Mesh.hh	/^    void computeTriangleGeometry(const Obj<real_section_type>& coordinates, const point_type& e, typename real_section_type::value_type v0[], typename real_section_type::value_type J[], typename real_section_type::value_type invJ[], typename real_section_type::value_type& detJ) {$/;"	f	class:ALE::IMesh
computeeigenvalues	include/petsc-private/kspimpl.h	/^  PetscErrorCode (*computeeigenvalues)(KSP,PetscInt,PetscReal*,PetscReal*,PetscInt *);$/;"	m	struct:_KSPOps
computeextremesingularvalues	include/petsc-private/kspimpl.h	/^  PetscErrorCode (*computeextremesingularvalues)(KSP,PetscReal*,PetscReal*);$/;"	m	struct:_KSPOps
computefunction	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*computefunction)(SNES,Vec,Vec,void*);$/;"	m	struct:_DMSNESOps
computegs	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*computegs)(SNES,Vec,Vec,void*);$/;"	m	struct:_DMSNESOps
computeinitialguess	include/petsc-private/kspimpl.h	/^  PetscErrorCode (*computeinitialguess)(KSP,Vec,void*);$/;"	m	struct:_DMKSPOps
computeinitialguess	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*computeinitialguess)(SNES,Vec,void*);$/;"	m	struct:_SNESOps
computejacobian	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*computejacobian)(SNES,Vec,Mat*,Mat*,MatStructure*,void*);$/;"	m	struct:_DMSNESOps
computeobjective	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*computeobjective)(SNES,Vec,PetscReal*,void*);$/;"	m	struct:_DMSNESOps
computeoperators	include/petsc-private/kspimpl.h	/^  PetscErrorCode (*computeoperators)(KSP,Mat,Mat,MatStructure*,void*);$/;"	m	struct:_DMKSPOps
computepfunction	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*computepfunction)(SNES,Vec,Vec,void*);$/;"	m	struct:_DMSNESOps
computepfunction	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*computepfunction)(SNES,Vec,Vec,void*);$/;"	m	struct:_SNESOps
computepjacobian	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*computepjacobian)(SNES,Vec,Mat*,Mat*,MatStructure*,void*);$/;"	m	struct:_DMSNESOps
computepjacobian	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*computepjacobian)(SNES,Vec,Mat*,Mat*,MatStructure*,void*);$/;"	m	struct:_SNESOps
computerhs	include/petsc-private/kspimpl.h	/^  PetscErrorCode (*computerhs)(KSP,Vec,void*);$/;"	m	struct:_DMKSPOps
computescaling	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*computescaling)(Vec,Vec,void*);$/;"	m	struct:_SNESOps
computevariablebounds	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*computevariablebounds)(DM,Vec,Vec);$/;"	m	struct:_DMOps
computevariablebounds	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*computevariablebounds)(SNES,Vec,Vec);        \/* user provided routine to set box constrained variable bounds *\/$/;"	m	struct:_SNESOps
cone	include/sieve/CartesianSieve.hh	/^    Obj<coneSequence> cone(const point_type& p) {$/;"	f	class:ALE::CartesianSieve
cone	include/sieve/Field.hh	/^    const Obj<coneSequence>& cone(const Input& p) {return this->_empty;}$/;"	f	class:ALE::DiscreteSieve
cone	include/sieve/Field.hh	/^    const Obj<coneSequence>& cone(const point_type& p) {return this->_empty;}$/;"	f	class:ALE::DiscreteSieve
cone	include/sieve/ISieve.hh	/^    const Obj<coneSequence>& cone(const point_type& p) const {$/;"	f	class:ALE::IFSieve
cone	include/sieve/ISieve.hh	/^    void cone(const PointSequence& points, Visitor& v) const {$/;"	f	class:ALE::IFSieve
cone	include/sieve/ISieve.hh	/^    void cone(const point_type& p, Visitor& v) const {$/;"	f	class:ALE::IFSieve
cone	include/sieve/LabelSifter.hh	/^    cone(const Obj<InputSequence>& points) {$/;"	f	class:ALE::LabelSifter
cone	include/sieve/LabelSifter.hh	/^    cone(const typename traits::target_type& p) {$/;"	f	class:ALE::LabelSifter
cone	include/sieve/Overlap.hh	/^  coneSequence cone(point_type point) {$/;"	f	class:PETSc::RecvOverlap
cone	include/sieve/Sifter.hh	/^    cone(const Obj<InputSequence>& points) {$/;"	f	class:ALE::ASifter
cone	include/sieve/Sifter.hh	/^    cone(const Obj<InputSequence>& points, const typename traits::color_type& color, bool useColor = true) {$/;"	f	class:ALE::ASifter
cone	include/sieve/Sifter.hh	/^    cone(const typename traits::target_type& p) {$/;"	f	class:ALE::ASifter
cone	include/sieve/Sifter.hh	/^    cone(const typename traits::target_type& p, const typename traits::color_type& color) {$/;"	f	class:ALE::ASifter
coneApply	include/sieve/LabelSifter.hh	/^    void coneApply(const typename traits::target_type& p, PointProcess& processor) {$/;"	f	class:ALE::LabelSifter
coneApply	include/sieve/Sifter.hh	/^    void coneApply(const typename traits::target_type& p, PointProcess& processor) {$/;"	f	class:ALE::ASifter
coneArray	include/sieve/CartesianSieve.hh	/^    typedef coneSequence coneArray;$/;"	t	class:ALE::CartesianSieve
coneArray	include/sieve/Field.hh	/^    typedef std::vector<point_type, alloc_type> coneArray;$/;"	t	class:ALE::DiscreteSieve
coneArray	include/sieve/ISieve.hh	/^    typedef pointArray             coneArray;$/;"	t	class:ALE::IFSieve
coneArray	include/sieve/LabelSifter.hh	/^      typedef ALE::array<source_type> coneArray;$/;"	t	struct:ALE::LabelSifter::__anon7
coneArray	include/sieve/Mesh.hh	/^    typedef typename base_type::coneArray             coneArray;$/;"	t	class:ALE::Mesh
coneArray	include/sieve/Mesh.hh	/^    typedef typename sieve_alg_type::coneArray                        coneArray;$/;"	t	class:ALE::Bundle
coneArray	include/sieve/Mesh.hh	/^    typedef typename sieve_alg_type::coneArray                        coneArray;$/;"	t	class:ALE::IBundle
coneArray	include/sieve/Sieve.hh	/^      typedef pointArray              coneArray;$/;"	t	class:ALE::Sieve
coneArray	include/sieve/SieveAlgorithms.hh	/^    typedef typename sieve_type::coneArray           coneArray;$/;"	t	class:ALE::SieveAlg
coneArray	include/sieve/Sifter.hh	/^      typedef ALE::array<source_type> coneArray;$/;"	t	struct:ALE::ASifter::__anon2
coneBegin	include/sieve/Overlap.hh	/^  typename coneSequence::iterator coneBegin(rank_type rank) {$/;"	f	class:PETSc::SendOverlap
coneBegin	include/sieve/Overlap.hh	/^  typename coneSequence::iterator coneBegin(rank_type rank, point_type remotePoint) {$/;"	f	class:PETSc::SendOverlap
coneBegin	include/sieve/Sifter.hh	/^    coneBegin(const typename traits::target_type& p) {$/;"	f	class:ALE::ASifter
coneCompletion	include/sieve/Distribution.hh	/^    static void coneCompletion(const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<bundle_type>& bundle, const Obj<SendSection>& sendSection, const Obj<RecvSection>& recvSection) {$/;"	f	class:ALE::Distribution
coneContains	include/sieve/LabelSifter.hh	/^    bool coneContains(const typename traits::target_type& p, const PointCheck& checker) {$/;"	f	class:ALE::LabelSifter
coneContains	include/sieve/Sifter.hh	/^    bool coneContains(const typename traits::target_type& p, const PointCheck& checker) {$/;"	f	class:ALE::ASifter
coneEnd	include/sieve/Overlap.hh	/^  typename coneSequence::iterator coneEnd(rank_type rank) {$/;"	f	class:PETSc::SendOverlap
coneEnd	include/sieve/Sifter.hh	/^    coneEnd(const typename traits::target_type& p) {$/;"	f	class:ALE::ASifter
coneInd	include/sieve/LabelSifter.hh	/^      typedef typename arrow_container_type::traits::targetSourceTag                 coneInd;$/;"	t	struct:ALE::LabelSifter::__anon7
coneInd	include/sieve/Sieve.hh	/^        typedef typename baseType::traits::coneInd              coneInd;$/;"	t	struct:ALE::Sieve::__anon9
coneInd	include/sieve/Sifter.hh	/^      typedef typename arrow_container_type::traits::targetColorTag                  coneInd;$/;"	t	struct:ALE::ASifter::__anon2
coneOffsets	include/sieve/ISieve.hh	/^    offsets_type         coneOffsets;$/;"	m	class:ALE::IFSieve
coneOrientations	include/petsc-private/dmpleximpl.h	/^  PetscInt            *coneOrientations;  \/* Orientation of each cone point, means cone traveral should start on point 'o', and if negative start on -(o+1) and go in reverse *\/$/;"	m	struct:__anon30
coneOrientations	include/petsc-private/meshimpl.h	/^  PetscInt            *coneOrientations; \/* TODO *\/$/;"	m	struct:__anon16
coneOrientations	include/sieve/ISieve.hh	/^    orientations_type    coneOrientations;$/;"	m	class:ALE::IFSieve
coneSection	include/petsc-private/dmpleximpl.h	/^  PetscSection         coneSection;       \/* Layout of cones (inedges for DAG) *\/$/;"	m	struct:__anon30
coneSection	include/petsc-private/meshimpl.h	/^  PetscSection         coneSection;    \/* Layout of cones (inedges for DAG) *\/$/;"	m	struct:__anon16
coneSeq	include/sieve/ISieve.hh	/^    Obj<coneSequence>    coneSeq;$/;"	m	class:ALE::IFSieve
coneSequence	include/sieve/CartesianSieve.hh	/^    typedef CartesianSieveDef::ConeSequence<point_type>    coneSequence;$/;"	t	class:ALE::CartesianSieve
coneSequence	include/sieve/CartesianSieve.hh	/^    typedef sieve_type::coneSequence           coneSequence;$/;"	t	class:ALE::CartesianMesh
coneSequence	include/sieve/Field.hh	/^    typedef std::vector<point_type, alloc_type> coneSequence;$/;"	t	class:ALE::DiscreteSieve
coneSequence	include/sieve/ISieve.hh	/^    typedef typename IFSieveDef::Sequence<point_type> coneSequence;$/;"	t	class:ALE::IFSieve
coneSequence	include/sieve/LabelSifter.hh	/^            coneSequence(graph_type& graph, typename traits::index_type& index, const typename base_type::key_type& k, const typename base_type::subkey_type& kk) : base_type(index, k, kk), _graph(graph) {};$/;"	f	struct:ALE::LabelSifter::__anon7::coneSequence
coneSequence	include/sieve/LabelSifter.hh	/^          coneSequence(graph_type& graph, typename traits::index_type& index, const typename base_type::key_type& k) : base_type(index, k), _graph(graph){};$/;"	f	struct:ALE::LabelSifter::__anon7::coneSequence
coneSequence	include/sieve/LabelSifter.hh	/^        coneSequence(const coneSequence& seq) : base_type(seq), _graph(seq._graph) {};$/;"	f	struct:ALE::LabelSifter::__anon7::coneSequence
coneSequence	include/sieve/LabelSifter.hh	/^      struct coneSequence : public arrow_container_type::traits::template ArrowSequence<typename ::boost::multi_index::index<typename arrow_container_type::set_type,coneInd>::type, target_type, source_type, BOOST_MULTI_INDEX_MEMBER(arrow_type, source_type, source)> {$/;"	s	struct:ALE::LabelSifter::__anon7
coneSequence	include/sieve/LabelSifter.hh	/^    typedef typename traits::coneSequence    coneSequence;$/;"	t	class:ALE::LabelSifter
coneSequence	include/sieve/Overlap.hh	/^  typedef DualSequence<point_type,point_type> coneSequence;$/;"	t	class:PETSc::SendOverlap
coneSequence	include/sieve/Overlap.hh	/^  typedef DualSequence<rank_type,point_type>  coneSequence;$/;"	t	class:PETSc::RecvOverlap
coneSequence	include/sieve/Sieve.hh	/^        typedef typename baseType::traits::coneSequence         coneSequence;$/;"	t	struct:ALE::Sieve::__anon9
coneSequence	include/sieve/Sifter.hh	/^            coneSequence(graph_type& graph, typename traits::index_type& index, const typename base_type::key_type& k, const typename base_type::subkey_type& kk) : base_type(index, k, kk), _graph(graph) {};$/;"	f	struct:ALE::ASifter::__anon2::coneSequence
coneSequence	include/sieve/Sifter.hh	/^          coneSequence(graph_type& graph, typename traits::index_type& index, const typename base_type::key_type& k) : base_type(index, k), _graph(graph){};$/;"	f	struct:ALE::ASifter::__anon2::coneSequence
coneSequence	include/sieve/Sifter.hh	/^        coneSequence(const coneSequence& seq) : base_type(seq), _graph(seq._graph) {};$/;"	f	struct:ALE::ASifter::__anon2::coneSequence
coneSequence	include/sieve/Sifter.hh	/^      struct coneSequence : public arrow_container_type::traits::template ArrowSequence<typename ::boost::multi_index::index<typename arrow_container_type::set_type,coneInd>::type, target_type, color_type, BOOST_MULTI_INDEX_MEMBER(arrow_type, source_type, source)> {$/;"	s	struct:ALE::ASifter::__anon2
coneSequence	include/sieve/Sifter.hh	/^    typedef typename traits::coneSequence                                           coneSequence;$/;"	t	class:ALE::Sifter
coneSequence	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^typedef ALE::Mesh::sieve_type::traits::coneSequence     coneSequence;$/;"	t	namespace:ALE::Hierarchy
coneSequence_alloc_type	include/sieve/Field.hh	/^    typedef typename alloc_type::template rebind<coneSequence>::other coneSequence_alloc_type;$/;"	t	class:ALE::DiscreteSieve
coneSequence_ptr	include/sieve/Field.hh	/^    typedef typename coneSequence_alloc_type::pointer                 coneSequence_ptr;$/;"	t	class:ALE::DiscreteSieve
coneSet	include/sieve/CartesianSieve.hh	/^    typedef coneSequence coneSet;$/;"	t	class:ALE::CartesianSieve
coneSet	include/sieve/Field.hh	/^    typedef std::vector<point_type, alloc_type> coneSet;$/;"	t	class:ALE::DiscreteSieve
coneSet	include/sieve/ISieve.hh	/^    typedef pointSet               coneSet;$/;"	t	class:ALE::IFSieve
coneSet	include/sieve/LabelSifter.hh	/^      typedef std::set<source_type, std::less<source_type>, typename Alloc_::template rebind<source_type>::other> coneSet;$/;"	t	struct:ALE::LabelSifter::__anon7
coneSet	include/sieve/Sieve.hh	/^      typedef pointSet                coneSet;$/;"	t	class:ALE::Sieve
coneSet	include/sieve/SieveAlgorithms.hh	/^    typedef typename sieve_type::coneSet             coneSet;$/;"	t	class:ALE::SieveAlg
coneSet	include/sieve/Sifter.hh	/^      typedef std::set<source_type>   coneSet;$/;"	t	struct:ALE::ASifter::__anon2
coneSet	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^typedef ALE::Mesh::sieve_type::coneSet                  coneSet;$/;"	t	namespace:ALE::Hierarchy
cone_section	include/sieve/Completion.hh	/^      typedef typename ALE::New::ConeSection<sieve_type>                                  cone_section;$/;"	t	class:ALE::New::Completion
cone_size_section	include/sieve/Completion.hh	/^      typedef typename ALE::New::ConeSizeSection<bundle_type, sieve_type>                 cone_size_section;$/;"	t	class:ALE::New::Completion
cones	include/petsc-private/dmpleximpl.h	/^  PetscInt            *cones;             \/* Cone for each point *\/$/;"	m	struct:__anon30
cones	include/petsc-private/meshimpl.h	/^  PetscInt            *cones;          \/* Cone for each point *\/$/;"	m	struct:__anon16
cones	include/sieve/ISieve.hh	/^    cones_type           cones;$/;"	m	class:ALE::IFSieve
cones_type	include/sieve/Distribution.hh	/^    typedef ALE::Section<ALE::Pair<int, point_type>, point_type>          cones_type;$/;"	t	class:ALE::DistributionNew
cones_type	include/sieve/ISieve.hh	/^    typedef point_type *cones_type;$/;"	t	class:ALE::IFSieve
config	config/BuildSystem/build/compile/Cxx.py	/^    import config.setCompilers$/;"	i
config	config/BuildSystem/build/framework.py	/^    import config.framework$/;"	i
config	config/BuildSystem/build/templates/usingC.py	/^    import config.base$/;"	i
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config	config/BuildSystem/config/ase.py	/^import config.base$/;"	i
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config	config/BuildSystem/config/compile/C.py	/^import config.setsOrdered as sets$/;"	i
config	config/BuildSystem/config/compile/CUDA.py	/^import config.compile.C$/;"	i
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config	config/BuildSystem/config/compile/CUDA.py	/^import config.libraries$/;"	i
config	config/BuildSystem/config/compile/CUDA.py	/^import config.setsOrdered as sets$/;"	i
config	config/BuildSystem/config/compile/Cxx.py	/^import config.compile.processor$/;"	i
config	config/BuildSystem/config/compile/Cxx.py	/^import config.framework$/;"	i
config	config/BuildSystem/config/compile/Cxx.py	/^import config.libraries$/;"	i
config	config/BuildSystem/config/compile/Cxx.py	/^import config.setsOrdered as sets$/;"	i
config	config/BuildSystem/config/compile/FC.py	/^import config.compile.C$/;"	i
config	config/BuildSystem/config/compile/FC.py	/^import config.compile.processor$/;"	i
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config	config/BuildSystem/config/compile/FC.py	/^import config.libraries$/;"	i
config	config/BuildSystem/config/compile/FC.py	/^import config.setsOrdered as sets$/;"	i
config	config/BuildSystem/config/compilerFlags.py	/^import config.base$/;"	i
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config	config/BuildSystem/config/compilerOptions.py	/^import config.base$/;"	i
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config	config/BuildSystem/config/compilers.py	/^import config.base$/;"	i
config	config/BuildSystem/config/framework.py	/^import config.base$/;"	i
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config	config/BuildSystem/config/headers.py	/^import config.base$/;"	i
config	config/BuildSystem/config/libraries.py	/^import config.base$/;"	i
config	config/BuildSystem/config/package.py	/^import config.base$/;"	i
config	config/BuildSystem/config/packages/BlasLapack.py	/^  import config.framework$/;"	i
config	config/BuildSystem/config/packages/BlasLapack.py	/^import config.base$/;"	i
config	config/BuildSystem/config/packages/BlasLapack.py	/^import config.package$/;"	i
config	config/BuildSystem/config/packages/CHOLMOD.py	/^import config.base$/;"	i
config	config/BuildSystem/config/packages/CHOLMOD.py	/^import config.package$/;"	i
config	config/BuildSystem/config/packages/MOAB.py	/^import config.package$/;"	i
config	config/BuildSystem/config/packages/MPI.py	/^  import config.framework$/;"	i
config	config/BuildSystem/config/packages/MPI.py	/^import config.base$/;"	i
config	config/BuildSystem/config/packages/MPI.py	/^import config.package$/;"	i
config	config/BuildSystem/config/packages/PETSc.py	/^  import config.framework$/;"	i
config	config/BuildSystem/config/packages/PETSc.py	/^import config.base$/;"	i
config	config/BuildSystem/config/packages/UMFPACK.py	/^import config.base$/;"	i
config	config/BuildSystem/config/packages/UMFPACK.py	/^import config.package$/;"	i
config	config/BuildSystem/config/packages/boost.py	/^import config.package$/;"	i
config	config/BuildSystem/config/packages/cusp.py	/^import config.package$/;"	i
config	config/BuildSystem/config/packages/exodusii.py	/^import config.base$/;"	i
config	config/BuildSystem/config/packages/exodusii.py	/^import config.package$/;"	i
config	config/BuildSystem/config/packages/f2cblaslapack.py	/^import config.package$/;"	i
config	config/BuildSystem/config/packages/fiat.py	/^import config.package$/;"	i
config	config/BuildSystem/config/packages/hdf5.py	/^import config.package$/;"	i
config	config/BuildSystem/config/packages/netcdf-cxx.py	/^import config.package$/;"	i
config	config/BuildSystem/config/packages/netcdf.py	/^import config.package$/;"	i
config	config/BuildSystem/config/packages/scientificpython.py	/^import config.package$/;"	i
config	config/BuildSystem/config/packages/thrust.py	/^import config.package$/;"	i
config	config/BuildSystem/config/programs.py	/^import config.base$/;"	i
config	config/BuildSystem/config/python.py	/^import config.base$/;"	i
config	config/BuildSystem/config/regression/frameworkTest.py	/^    import config.base$/;"	i
config	config/BuildSystem/config/regression/frameworkTest.py	/^    import config.framework$/;"	i
config	config/BuildSystem/config/regression/shellTest.py	/^    import config.base$/;"	i
config	config/BuildSystem/config/setCompilers.py	/^import config.base$/;"	i
config	config/BuildSystem/config/sourceControl.py	/^import config.base$/;"	i
config	config/BuildSystem/config/types.py	/^import config.base$/;"	i
config	config/BuildSystem/configure.py	/^import config.base$/;"	i
config	config/BuildSystem/maker.py	/^      import config.framework$/;"	i
config	config/BuildSystem/maker.py	/^  import config.setsBackport as sets$/;"	i
config	config/BuildSystem/retrieval.py	/^import config.base$/;"	i
config	config/PETSc/Configure.py	/^import config.base$/;"	i
config	config/PETSc/package.py	/^import config.base$/;"	i
config	config/PETSc/package.py	/^import config.package$/;"	i
config	config/PETSc/packages/Suggar.py	/^    import config.setCompilers$/;"	i
config	config/PETSc/packages/Triangle.py	/^      import config.setCompilers$/;"	i
config	config/PETSc/packages/Triangle.py	/^    import config.base$/;"	i
config	config/PETSc/packages/cuda.py	/^    import config.setCompilers$/;"	i
config	config/PETSc/packages/elemental.py	/^    import config.setCompilers$/;"	i
config	config/PETSc/packages/hypre.py	/^    import config.setCompilers$/;"	i
config	config/PETSc/packages/ml.py	/^    import config.setCompilers$/;"	i
config	config/PETSc/packages/tetgen.py	/^    import config.base$/;"	i
config	config/PETSc/packages/txpetscgpu.py	/^import config.package$/;"	i
config	config/PETSc/petsc.py	/^  import config.framework$/;"	i
config	config/PETSc/petsc.py	/^import config.base$/;"	i
config	config/PETSc/utilities/CHUD.py	/^import config.base$/;"	i
config	config/PETSc/utilities/Etags.py	/^import config.base$/;"	i
config	config/PETSc/utilities/FPTrap.py	/^import config.base$/;"	i
config	config/PETSc/utilities/Regression.py	/^import config.base$/;"	i
config	config/PETSc/utilities/arch.py	/^import config.base$/;"	i
config	config/PETSc/utilities/bmakeDir.py	/^import config.base$/;"	i
config	config/PETSc/utilities/cacheDetails.py	/^import config.base$/;"	i
config	config/PETSc/utilities/dataFilesPath.py	/^import config.base$/;"	i
config	config/PETSc/utilities/debuggers.py	/^import config.base$/;"	i
config	config/PETSc/utilities/debugging.py	/^import config.base$/;"	i
config	config/PETSc/utilities/fortranCPP.py	/^import config.base$/;"	i
config	config/PETSc/utilities/fortranCommandLine.py	/^import config.base$/;"	i
config	config/PETSc/utilities/getResidentSetSize.py	/^import config.base$/;"	i
config	config/PETSc/utilities/languages.py	/^import config.base$/;"	i
config	config/PETSc/utilities/libraryOptions.py	/^import config.base$/;"	i
config	config/PETSc/utilities/memAlign.py	/^import config.base$/;"	i
config	config/PETSc/utilities/missing.py	/^import config.base$/;"	i
config	config/PETSc/utilities/petscdir.py	/^import config.base$/;"	i
config	config/PETSc/utilities/scalarTypes.py	/^import config.base$/;"	i
config	config/PETSc/utilities/sharedLibraries.py	/^import config.base$/;"	i
config	config/PETSc/utilities/timer.py	/^import config.base$/;"	i
config	config/configure.py	/^  import config.base$/;"	i
config	config/configure.py	/^  import config.framework$/;"	i
configDir	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^  configDir = os.path.join(os.environ['PETSC_DIR'], 'config')$/;"	v
configDir	bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py	/^  configDir = os.path.join(os.environ['PETSC_DIR'], 'config')$/;"	v
configDir	config/builder2.py	/^  configDir = os.path.join(os.environ['PETSC_DIR'], 'config')$/;"	v
configfile	bin/TOPSInstaller.py	/^        configfile=os.path.join(petscroot,'config-'+arch+'.py')$/;"	v
configure	bin/TOPSInstaller.py	/^        f.write('  import configure\\n')$/;"	i
configure	config/BuildSystem/config/ase.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/BuildSystem/config/atomics.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/BuildSystem/config/base.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/BuildSystem/config/compilerFlags.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/BuildSystem/config/compilers.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/BuildSystem/config/framework.py	/^  def configure(self, out = None):$/;"	m	class:Framework
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configure	config/BuildSystem/config/headers.py	/^  def configure(self):$/;"	f
configure	config/BuildSystem/config/libraries.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/BuildSystem/config/package.py	/^  def configure(self):$/;"	m	class:GNUPackage
configure	config/BuildSystem/config/package.py	/^  def configure(self):$/;"	m	class:Package
configure	config/BuildSystem/config/packages/BlasLapack.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/BuildSystem/config/packages/PETSc.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/BuildSystem/config/preTests.py	/^  def configure(self):$/;"	f
configure	config/BuildSystem/config/programs.py	/^  def configure(self):$/;"	f
configure	config/BuildSystem/config/python.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/BuildSystem/config/setCompilers.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/BuildSystem/config/sourceControl.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/BuildSystem/config/types.py	/^  def configure(self):$/;"	f
configure	config/BuildSystem/configure.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/BuildSystem/make.py	/^  def configure(self, builder):$/;"	m	class:Make
configure	config/BuildSystem/maker.py	/^  def configure(self, builder):$/;"	m	class:BasicMake
configure	config/BuildSystem/maker.py	/^  def configure(self, builder):$/;"	m	class:Make
configure	config/BuildSystem/maker.py	/^  def configure(self, builder):$/;"	m	class:SIDLMake
configure	config/PETSc/Configure.py	/^    f.write('  import configure\\n')$/;"	i
configure	config/PETSc/Configure.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/packages/c2html.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/packages/cmake.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/packages/cproto.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/packages/lgrind.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/packages/sowing.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/packages/valgrind.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/petsc.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/utilities/CHUD.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/utilities/Etags.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/utilities/FPTrap.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/utilities/Regression.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/utilities/arch.py	/^  def configure(self):$/;"	f
configure	config/PETSc/utilities/bmakeDir.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/utilities/cacheDetails.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/utilities/dataFilesPath.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/utilities/debuggers.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/utilities/debugging.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/utilities/fortranCPP.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/utilities/fortranCommandLine.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/utilities/getResidentSetSize.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/utilities/languages.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/utilities/libraryOptions.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/utilities/memAlign.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/utilities/missing.py	/^  def configure(self):$/;"	f
configure	config/PETSc/utilities/petscdir.py	/^  def configure(self):$/;"	f
configure	config/PETSc/utilities/scalarTypes.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/utilities/sharedLibraries.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/PETSc/utilities/timer.py	/^  def configure(self):$/;"	m	class:Configure
configure	config/examples/arch-aix64-dbg.py	/^  import configure$/;"	i
configure	config/examples/arch-bgp-ibm-opt.py	/^  import configure$/;"	i
configure	config/examples/arch-c-exodus-dbg-builder.py	/^  import configure$/;"	i
configure	config/examples/arch-cray-xt5-opt.py	/^  import configure$/;"	i
configure	config/examples/arch-cray-xt6-pkgs-opt.py	/^  import configure$/;"	i
configure	config/examples/arch-cuda-cg-opt.py	/^  import configure$/;"	i
configure	config/examples/arch-cuda-double.py	/^  import configure$/;"	i
configure	config/examples/arch-cuda.py	/^  import configure$/;"	i
configure	config/examples/arch-cuda5-cg-opt.py	/^  import configure$/;"	i
configure	config/examples/arch-freebsd-cxx-cmplx-pkgs-dbg.py	/^  import configure$/;"	i
configure	config/examples/arch-freebsd-cxx-pkgs-opt.py	/^  import configure$/;"	i
configure	config/examples/arch-freebsd-pkgs-opt.py	/^  import configure$/;"	i
configure	config/examples/arch-fusion-intel-c-opt.py	/^  import configure$/;"	i
configure	config/examples/arch-linux-c89.py	/^  import configure$/;"	i
configure	config/examples/arch-linux-complex-gcov.py	/^  import configure$/;"	i
configure	config/examples/arch-linux-cxx-sieve-gcov.py	/^  import configure$/;"	i
configure	config/examples/arch-linux-cxx-sieve.py	/^  import configure$/;"	i
configure	config/examples/arch-linux-dbg-quad.py	/^  import configure$/;"	i
configure	config/examples/arch-linux-gcc-absoft.py	/^    import configure$/;"	i
configure	config/examples/arch-linux-gcc-ifc.py	/^  import configure$/;"	i
configure	config/examples/arch-linux-gcc-pgf90.py	/^  import configure$/;"	i
configure	config/examples/arch-linux-gcc-real-opt.py	/^  import configure$/;"	i
configure	config/examples/arch-linux-gcc-real.py	/^  import configure$/;"	i
configure	config/examples/arch-linux-gcov.py	/^  import configure$/;"	i
configure	config/examples/arch-linux-gxx-complex.py	/^  import configure$/;"	i
configure	config/examples/arch-linux-mpich1.py	/^  import configure$/;"	i
configure	config/examples/arch-linux-pkgs-64idx.py	/^  import configure$/;"	i
configure	config/examples/arch-linux-pkgs-cxx-mlib.py	/^  import configure$/;"	i
configure	config/examples/arch-linux-pkgs-dbg-ftn-interfaces.py	/^  import configure$/;"	i
configure	config/examples/arch-linux-pkgs-gcov.py	/^  import configure$/;"	i
configure	config/examples/arch-linux-pkgs-opt-threadcomm.py	/^  import configure$/;"	i
configure	config/examples/arch-linux-pkgs-opt.py	/^  import configure$/;"	i
configure	config/examples/arch-linux-pkgs-threadcomm.py	/^  import configure$/;"	i
configure	config/examples/arch-linux-pkgs-valgrind.py	/^  import configure$/;"	i
configure	config/examples/arch-linux-uni.py	/^  import configure$/;"	i
configure	config/examples/arch-matlab-uni-mkl_ilp64.py	/^  import configure$/;"	i
configure	config/examples/arch-moab.py	/^  import configure$/;"	i
configure	config/examples/arch-mswin-borland.py	/^  import configure$/;"	i
configure	config/examples/arch-mswin-cuda.py	/^  import configure$/;"	i
configure	config/examples/arch-mswin-cxx-cmplx.py	/^  import configure$/;"	i
configure	config/examples/arch-mswin-gnu.py	/^  import configure$/;"	i
configure	config/examples/arch-mswin.py	/^  import configure$/;"	i
configure	config/examples/arch-opensolaris-cmplx-pkgs-dbg.py	/^  import configure$/;"	i
configure	config/examples/arch-opensolaris-misc.py	/^  import configure$/;"	i
configure	config/examples/arch-opensolaris-pkgs-opt.py	/^  import configure$/;"	i
configure	config/examples/arch-osx-10.6-cxx-cmplx-pkgs-dbg.py	/^  import configure$/;"	i
configure	config/examples/arch-osx-10.6-cxx-pkgs-opt.py	/^  import configure$/;"	i
configure	config/examples/arch-osx-10.6.py	/^  import configure$/;"	i
configure	config/examples/arch-viennacl.py	/^  import configure$/;"	i
configure	config/examples/asterix/asterix32-sun.py	/^  import configure$/;"	i
configure	config/examples/asterix/asterix32.py	/^  import configure$/;"	i
configure	config/examples/asterix/asterix64-c89.py	/^  import configure$/;"	i
configure	config/examples/asterix/asterix64-openmpi.py	/^  import configure$/;"	i
configure	config/examples/asterix/asterix64-sun.py	/^  import configure$/;"	i
configure	config/examples/asterix/asterix64.py	/^  import configure$/;"	i
configure	config/examples/basic/arch-gcc-complex-O.py	/^  import configure$/;"	i
configure	config/examples/basic/arch-gcc-complex.py	/^  import configure$/;"	i
configure	config/examples/basic/arch-gcc-real-O.py	/^  import configure$/;"	i
configure	config/examples/basic/arch-gcc-real.py	/^  import configure$/;"	i
configure	config/examples/basic/arch-gcc64-complex-O.py	/^  import configure$/;"	i
configure	config/examples/basic/arch-gcc64-complex.py	/^  import configure$/;"	i
configure	config/examples/basic/arch-gcc64-real-O.py	/^  import configure$/;"	i
configure	config/examples/basic/arch-gcc64-real.py	/^  import configure$/;"	i
configure	config/examples/basic/arch-gxx-complex-O.py	/^  import configure$/;"	i
configure	config/examples/basic/arch-gxx-complex.py	/^  import configure$/;"	i
configure	config/examples/basic/arch-gxx-real-O.py	/^  import configure$/;"	i
configure	config/examples/basic/arch-gxx-real.py	/^  import configure$/;"	i
configure	config/examples/basic/arch-gxx64-complex-O.py	/^  import configure$/;"	i
configure	config/examples/basic/arch-gxx64-complex.py	/^  import configure$/;"	i
configure	config/examples/basic/arch-gxx64-real-O.py	/^  import configure$/;"	i
configure	config/examples/basic/arch-gxx64-real.py	/^  import configure$/;"	i
configureASELibraries	config/BuildSystem/config/ase.py	/^  def configureASELibraries(self):$/;"	m	class:Configure
configureArchitecture	config/PETSc/utilities/arch.py	/^  def configureArchitecture(self):$/;"	m	class:Configure
configureAtoll	config/PETSc/Configure.py	/^  def configureAtoll(self):$/;"	m	class:Configure
configureBatch	config/BuildSystem/config/framework.py	/^  def configureBatch(self):$/;"	m	class:Framework
configureBmakeDir	config/PETSc/utilities/bmakeDir.py	/^  def configureBmakeDir(self):$/;"	m	class:Configure
configureCHUD	config/PETSc/utilities/CHUD.py	/^  def configureCHUD(self):$/;"	m	class:Configure
configureCLanguage	config/PETSc/utilities/languages.py	/^  def configureCLanguage(self):$/;"	m	class:Configure
configureCPURelax	config/BuildSystem/config/atomics.py	/^  def configureCPURelax(self):$/;"	m	class:Configure
configureCVS	config/BuildSystem/config/sourceControl.py	/^  def configureCVS(self):$/;"	m	class:Configure
configureCacheDetails	config/PETSc/utilities/cacheDetails.py	/^  def configureCacheDetails(self):$/;"	m	class:Configure
configureCompilerFlags	config/BuildSystem/config/compilerFlags.py	/^  def configureCompilerFlags(self):$/;"	m	class:Configure
configureConversion	config/BuildSystem/config/packages/MPI.py	/^  def configureConversion(self):$/;"	m	class:Configure
configureCygwin	config/BuildSystem/configure.py	/^  def configureCygwin(self):$/;"	m	class:Configure
configureDebuggers	config/PETSc/utilities/debuggers.py	/^  def configureDebuggers(self):$/;"	m	class:Configure
configureDebugging	config/PETSc/utilities/debugging.py	/^  def configureDebugging(self):$/;"	m	class:Configure
configureDefaultArch	config/PETSc/Configure.py	/^  def configureDefaultArch(self):$/;"	m	class:Configure
configureDeprecated	config/PETSc/Configure.py	/^  def configureDeprecated(self):$/;"	m	class:Configure
configureDirectories	config/PETSc/utilities/petscdir.py	/^  def configureDirectories(self):$/;"	m	class:Configure
configureDisutils	config/BuildSystem/config/python.py	/^  def configureDisutils(self):$/;"	m	class:Configure
configureDynamicLibraries	config/PETSc/utilities/sharedLibraries.py	/^  def configureDynamicLibraries(self):$/;"	m	class:Configure
configureETags	config/PETSc/utilities/Etags.py	/^  def configureETags(self):$/;"	m	class:Configure
configureExpect	config/PETSc/Configure.py	/^  def configureExpect(self):$/;"	m	class:Configure
configureExternalPackagesDir	config/BuildSystem/config/framework.py	/^  def configureExternalPackagesDir(self):$/;"	m	class:Framework
configureExternalPackagesDir	config/PETSc/utilities/petscdir.py	/^  def configureExternalPackagesDir(self):$/;"	f
configureFPTrap	config/PETSc/utilities/FPTrap.py	/^  def configureFPTrap(self):$/;"	m	class:Configure
configureFeatureTestMacros	config/PETSc/Configure.py	/^  def configureFeatureTestMacros(self):$/;"	m	class:Configure
configureFortranCPP	config/PETSc/utilities/fortranCPP.py	/^  def configureFortranCPP(self):$/;"	m	class:Configure
configureFortranCommandLine	config/PETSc/utilities/fortranCommandLine.py	/^  def configureFortranCommandLine(self):$/;"	m	class:Configure
configureFortranFlush	config/PETSc/Configure.py	/^  def configureFortranFlush(self):$/;"	m	class:Configure
configureFortranLanguage	config/PETSc/utilities/languages.py	/^  def configureFortranLanguage(self):$/;"	m	class:Configure
configureFunctionName	config/PETSc/Configure.py	/^  def configureFunctionName(self):$/;"	m	class:Configure
configureGCOV	config/PETSc/Configure.py	/^  def configureGCOV(self):$/;"	m	class:Configure
configureGit	config/BuildSystem/config/sourceControl.py	/^  def configureGit(self):$/;"	m	class:Configure
configureIO	config/BuildSystem/config/packages/MPI.py	/^  def configureIO(self):$/;"	m	class:Configure
configureISColorValueType	config/PETSc/utilities/libraryOptions.py	/^  def configureISColorValueType(self):$/;"	m	class:Configure
configureInline	config/PETSc/Configure.py	/^  def configureInline(self):$/;"	m	class:Configure
configureInstall	config/PETSc/Configure.py	/^  def configureInstall(self):$/;"	m	class:Configure
configureInstallationMethod	config/PETSc/utilities/petscdir.py	/^  def configureInstallationMethod(self):$/;"	f
configureIntptrt	config/PETSc/Configure.py	/^  def configureIntptrt(self):$/;"	m	class:Configure
configureLibrary	config/BuildSystem/config/package.py	/^  def configureLibrary(self):$/;"	m	class:GNUPackage
configureLibrary	config/BuildSystem/config/package.py	/^  def configureLibrary(self):$/;"	m	class:Package
configureLibrary	config/BuildSystem/config/packages/BlasLapack.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/BuildSystem/config/packages/MPI.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/BuildSystem/config/packages/PETSc.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/BuildSystem/config/packages/cusp.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/BuildSystem/config/packages/exodusii.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/BuildSystem/config/packages/fiat.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/BuildSystem/config/packages/hdf5.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/BuildSystem/config/packages/scientificpython.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/BuildSystem/config/packages/thrust.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/packages/FFC.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/packages/Generator.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/packages/MUMPS.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/packages/Matlab.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/packages/MatlabEngine.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/packages/Numpy.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/packages/Triangle.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/packages/ams.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/packages/babel.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/packages/ccafe.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/packages/cuda.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/packages/java.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/packages/mpi4py.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/packages/openmp.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/packages/pcbddc.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/packages/petsc4py.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/packages/pthread.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/packages/pthreadclasses.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/packages/server.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/packages/threadcomm.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/packages/txpetscgpu.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibrary	config/PETSc/petsc.py	/^  def configureLibrary(self):$/;"	m	class:Configure
configureLibraryOptions	config/PETSc/utilities/libraryOptions.py	/^  def configureLibraryOptions(self):$/;"	m	class:Configure
configureLinux	config/PETSc/Configure.py	/^  def configureLinux(self):$/;"	m	class:Configure
configureMPI2	config/BuildSystem/config/packages/MPI.py	/^  def configureMPI2(self):$/;"	m	class:Configure
configureMPIEXEC	config/BuildSystem/config/packages/MPI.py	/^  def configureMPIEXEC(self):$/;"	m	class:Configure
configureMPITypes	config/BuildSystem/config/packages/MPI.py	/^  def configureMPITypes(self):$/;"	m	class:Configure
configureMake	config/BuildSystem/config/programs.py	/^  def configureMake(self):$/;"	m	class:Configure
configureMemAlign	config/PETSc/utilities/memAlign.py	/^  def configureMemAlign(self):$/;"	m	class:Configure
configureMemoryBarriers	config/BuildSystem/config/atomics.py	/^  def configureMemoryBarriers(self):$/;"	m	class:Configure
configureMemorySize	config/PETSc/utilities/getResidentSetSize.py	/^  def configureMemorySize(self):$/;"	m	class:Configure
configureMercurial	config/BuildSystem/config/sourceControl.py	/^  def configureMercurial(self):$/;"	m	class:Configure
configureMissingDefines	config/PETSc/utilities/missing.py	/^  def configureMissingDefines(self):$/;"	m	class:Configure
configureMissingErrnos	config/PETSc/utilities/missing.py	/^  def configureMissingErrnos(self):$/;"	m	class:Configure
configureMissingFunctions	config/PETSc/utilities/missing.py	/^  def configureMissingFunctions(self):$/;"	m	class:Configure
configureMissingGetdomainnamePrototype	config/PETSc/utilities/missing.py	/^  def configureMissingGetdomainnamePrototype(self):$/;"	m	class:Configure
configureMissingIntelFastPrototypes	config/PETSc/utilities/missing.py	/^  def configureMissingIntelFastPrototypes(self):$/;"	f
configureMissingPrototypes	config/BuildSystem/config/packages/MPI.py	/^  def configureMissingPrototypes(self):$/;"	m	class:Configure
configureMissingSignals	config/PETSc/utilities/missing.py	/^  def configureMissingSignals(self):$/;"	m	class:Configure
configureMissingSrandPrototype	config/PETSc/utilities/missing.py	/^  def configureMissingSrandPrototype(self):$/;"	f
configureMissingUtypeTypedefs	config/PETSc/utilities/missing.py	/^  def configureMissingUtypeTypedefs(self):$/;"	m	class:Configure
configureMkdir	config/BuildSystem/config/programs.py	/^  def configureMkdir(self):$/;"	f
configurePC	config/BuildSystem/config/packages/cusp.py	/^  def configurePC(self):$/;"	m	class:Configure
configurePrecision	config/PETSc/utilities/scalarTypes.py	/^  def configurePrecision(self):$/;"	m	class:Configure
configurePrefetch	config/PETSc/Configure.py	/^  def configurePrefetch(self):$/;"	m	class:Configure
configurePrograms	config/BuildSystem/config/programs.py	/^  def configurePrograms(self):$/;"	f
configurePythonLibraries	config/BuildSystem/config/python.py	/^  def configurePythonLibraries(self):$/;"	m	class:Configure
configureRegression	config/PETSc/utilities/Regression.py	/^  def configureRegression(self):$/;"	m	class:Configure
configureScalarType	config/PETSc/utilities/scalarTypes.py	/^  def configureScalarType(self):$/;"	m	class:Configure
configureScandal	config/BuildSystem/config/ase.py	/^  def configureScandal(self):$/;"	m	class:Configure
configureScript	config/PETSc/Configure.py	/^  def configureScript(self):$/;"	m	class:Configure
configureSharedLibraries	config/PETSc/utilities/sharedLibraries.py	/^  def configureSharedLibraries(self):$/;"	m	class:Configure
configureSolaris	config/PETSc/Configure.py	/^  def configureSolaris(self):$/;"	m	class:Configure
configureSubversion	config/BuildSystem/config/sourceControl.py	/^  def configureSubversion(self):$/;"	m	class:Configure
configureTimers	config/PETSc/utilities/timer.py	/^  def configureTimers(self):$/;"	m	class:Configure
configureTypes	config/BuildSystem/config/packages/MPI.py	/^  def configureTypes(self):$/;"	m	class:Configure
configureTypes	config/PETSc/packages/cuda.py	/^  def configureTypes(self):$/;"	m	class:Configure
configureUnused	config/PETSc/Configure.py	/^  def configureUnused(self):$/;"	m	class:Configure
configureVersion	config/BuildSystem/config/packages/PETSc.py	/^  def configureVersion(self):$/;"	m	class:Configure
configureVersion	config/PETSc/petsc.py	/^  def configureVersion(self):$/;"	m	class:Configure
configureWin32	config/PETSc/Configure.py	/^  def configureWin32(self):$/;"	m	class:Configure
configure_options	config/examples/arch-aix64-dbg.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-bgp-ibm-opt.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-c-exodus-dbg-builder.py	/^  configure_options = [$/;"	v
configure_options	config/examples/arch-cray-xt5-opt.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-cray-xt6-pkgs-opt.py	/^  configure_options = [$/;"	v
configure_options	config/examples/arch-cuda-cg-opt.py	/^  configure_options = [$/;"	v
configure_options	config/examples/arch-cuda-double.py	/^  configure_options = [$/;"	v
configure_options	config/examples/arch-cuda.py	/^  configure_options = [$/;"	v
configure_options	config/examples/arch-cuda5-cg-opt.py	/^  configure_options = [$/;"	v
configure_options	config/examples/arch-freebsd-cxx-cmplx-pkgs-dbg.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-freebsd-cxx-pkgs-opt.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-freebsd-pkgs-opt.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-fusion-intel-c-opt.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-linux-c89.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-linux-complex-gcov.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-linux-cxx-sieve-gcov.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-linux-cxx-sieve.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-linux-dbg-quad.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-linux-gcc-absoft.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-linux-gcc-ifc.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-linux-gcc-pgf90.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-linux-gcc-real-opt.py	/^  configure_options = [$/;"	v
configure_options	config/examples/arch-linux-gcc-real.py	/^  configure_options = [$/;"	v
configure_options	config/examples/arch-linux-gcov.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-linux-gxx-complex.py	/^  configure_options = [$/;"	v
configure_options	config/examples/arch-linux-mpich1.py	/^  configure_options = [$/;"	v
configure_options	config/examples/arch-linux-pkgs-64idx.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-linux-pkgs-cxx-mlib.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-linux-pkgs-dbg-ftn-interfaces.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-linux-pkgs-gcov.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-linux-pkgs-opt-threadcomm.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-linux-pkgs-opt.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-linux-pkgs-threadcomm.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-linux-pkgs-valgrind.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-linux-uni.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-matlab-uni-mkl_ilp64.py	/^  configure_options = [$/;"	v
configure_options	config/examples/arch-moab.py	/^  configure_options = [$/;"	v
configure_options	config/examples/arch-mswin-borland.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-mswin-cuda.py	/^  configure_options = [$/;"	v
configure_options	config/examples/arch-mswin-cxx-cmplx.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-mswin-gnu.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-mswin.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-opensolaris-cmplx-pkgs-dbg.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-opensolaris-misc.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-opensolaris-pkgs-opt.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-osx-10.6-cxx-cmplx-pkgs-dbg.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-osx-10.6-cxx-pkgs-opt.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-osx-10.6.py	/^configure_options = [$/;"	v
configure_options	config/examples/arch-viennacl.py	/^  configure_options = [$/;"	v
configure_options	config/examples/asterix/asterix32-sun.py	/^configure_options = [$/;"	v
configure_options	config/examples/asterix/asterix32.py	/^configure_options = [$/;"	v
configure_options	config/examples/asterix/asterix64-c89.py	/^configure_options = [$/;"	v
configure_options	config/examples/asterix/asterix64-openmpi.py	/^configure_options = [$/;"	v
configure_options	config/examples/asterix/asterix64-sun.py	/^configure_options = [$/;"	v
configure_options	config/examples/asterix/asterix64.py	/^configure_options = [$/;"	v
configure_options	config/examples/basic/arch-gcc-complex-O.py	/^  configure_options = [$/;"	v
configure_options	config/examples/basic/arch-gcc-complex.py	/^  configure_options = [$/;"	v
configure_options	config/examples/basic/arch-gcc-real-O.py	/^  configure_options = [$/;"	v
configure_options	config/examples/basic/arch-gcc-real.py	/^  configure_options = [$/;"	v
configure_options	config/examples/basic/arch-gcc64-complex-O.py	/^  configure_options = [$/;"	v
configure_options	config/examples/basic/arch-gcc64-complex.py	/^  configure_options = [$/;"	v
configure_options	config/examples/basic/arch-gcc64-real-O.py	/^  configure_options = [$/;"	v
configure_options	config/examples/basic/arch-gcc64-real.py	/^  configure_options = [$/;"	v
configure_options	config/examples/basic/arch-gxx-complex-O.py	/^  configure_options = [$/;"	v
configure_options	config/examples/basic/arch-gxx-complex.py	/^  configure_options = [$/;"	v
configure_options	config/examples/basic/arch-gxx-real-O.py	/^  configure_options = [$/;"	v
configure_options	config/examples/basic/arch-gxx-real.py	/^  configure_options = [$/;"	v
configure_options	config/examples/basic/arch-gxx64-complex-O.py	/^  configure_options = [$/;"	v
configure_options	config/examples/basic/arch-gxx64-complex.py	/^  configure_options = [$/;"	v
configure_options	config/examples/basic/arch-gxx64-real-O.py	/^  configure_options = [$/;"	v
configure_options	config/examples/basic/arch-gxx64-real.py	/^  configure_options = [$/;"	v
conjugate	include/petsc-private/matimpl.h	/^  PetscErrorCode (*conjugate)(Mat);                              \/* complex conjugate *\/$/;"	m	struct:_MatOps
conjugate	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*conjugate)(Vec);$/;"	m	struct:_VecOps
connectParent	config/BuildSystem/RDict.py	/^  def connectParent(self, addr, dir):$/;"	m	class:RDict
consistencyChecks	config/BuildSystem/config/package.py	/^  def consistencyChecks(self):$/;"	m	class:Package
consistencyChecks	config/PETSc/package.py	/^  def consistencyChecks(self):$/;"	m	class:NewPackage
consistencyChecks	config/PETSc/packages/MUMPS.py	/^  def consistencyChecks(self):$/;"	m	class:Configure
consistencyChecks	config/PETSc/packages/Sieve.py	/^  def consistencyChecks(self):$/;"	m	class:Configure
consistencyChecks	config/PETSc/packages/SuperLU.py	/^  def consistencyChecks(self):$/;"	m	class:Configure
consistencyChecks	config/PETSc/packages/SuperLU_DIST.py	/^  def consistencyChecks(self):$/;"	m	class:Configure
consistencyChecks	config/PETSc/packages/hypre.py	/^  def consistencyChecks(self):$/;"	m	class:Configure
consistencyChecks	config/PETSc/packages/ml.py	/^  def consistencyChecks(self):$/;"	m	class:Configure
consistencyChecks	config/PETSc/packages/scalapack.py	/^  def consistencyChecks(self):$/;"	m	class:Configure
consistencyChecks	config/PETSc/packages/spai.py	/^  def consistencyChecks(self):$/;"	m	class:Configure
const_iterator	include/sieve/Field.hh	/^      const_iterator(const typename Map::const_iterator& iter): _iter(iter) {};$/;"	f	class:ALE::SetFromMap::const_iterator
const_iterator	include/sieve/Field.hh	/^    class const_iterator {$/;"	c	class:ALE::SetFromMap
const_iterator	include/sieve/ISieve.hh	/^        const_iterator(const point_type data[], const int pos) : _data(data), _pos(pos) {};$/;"	f	class:ALE::IFSieveDef::Sequence::const_iterator
const_iterator	include/sieve/ISieve.hh	/^      class const_iterator {$/;"	c	class:ALE::IFSieveDef::Sequence
const_iterator	include/sieve/ISieve.hh	/^      const_iterator(const point_type p): _p(p) {};$/;"	f	class:ALE::Interval::const_iterator
const_iterator	include/sieve/ISieve.hh	/^    class const_iterator {$/;"	c	class:ALE::Interval
const_iterator	include/sieve/LabelSifter.hh	/^        typedef typename base_type::iterator const_iterator;$/;"	t	struct:ALE::LabelSifter::__anon7::supportSequence
const_pointer	include/sieve/ALE_mem.hh	/^    typedef const value_type* const_pointer;$/;"	t	class:ALE::malloc_allocator
const_pointer	include/sieve/ALE_mem.hh	/^    typedef const void* const_pointer;$/;"	t	class:ALE::malloc_allocator
const_pointer	include/sieve/ALE_mem.hh	/^    typedef typename Alloc::const_pointer   const_pointer;$/;"	t	class:ALE::polymorphic_allocator
const_pointer	include/sieve/ALE_mem.hh	/^    typedef typename polymorphic_allocator<T>::const_pointer   const_pointer;$/;"	t	class:ALE::logged_allocator
const_reference	include/sieve/ALE_mem.hh	/^    typedef const value_type& const_reference;$/;"	t	class:ALE::malloc_allocator
const_reference	include/sieve/ALE_mem.hh	/^    typedef typename Alloc::const_reference const_reference;$/;"	t	class:ALE::polymorphic_allocator
const_reference	include/sieve/ALE_mem.hh	/^    typedef typename polymorphic_allocator<T>::const_reference const_reference;$/;"	t	class:ALE::logged_allocator
constant	src/dm/impls/plex/examples/tests/ex3.c	/^void constant(const PetscReal coords[], PetscScalar *u)$/;"	f
constant_section_type	src/dm/impls/mesh/examples/tests/section1-old.cxx	/^typedef ALE::Test::constant_section_type constant_section_type;$/;"	t	file:
constant_section_type	src/dm/impls/mesh/examples/tests/sectionTest.hh	/^    typedef ALE::ConstantSection<sieve_type, double> constant_section_type;$/;"	t	namespace:ALE::Test
construct	include/sieve/ALE_mem.hh	/^    void          construct(pointer _p, const T& _val) { alloc.construct(_p, _val);                                   };$/;"	f	class:ALE::polymorphic_allocator
construct	include/sieve/ALE_mem.hh	/^    void construct(pointer p, const value_type& x) {new(p) value_type(x);}$/;"	f	class:ALE::malloc_allocator
construct	include/sieve/ALE_mem.hh	/^  void logged_allocator<T, O>::construct(T* _p, const T& _val) {$/;"	f	class:ALE::logged_allocator
construct	include/sieve/Field.hh	/^    void construct(const Obj<Sizer>& sizer) {$/;"	f	class:ALE::Field
construct	include/sieve/Field.hh	/^    void construct(const int size) {$/;"	f	class:ALE::Field
constructCommunication	include/sieve/Field.hh	/^    void constructCommunication(const request_type& requestType) {$/;"	f	class:ALE::Field
constructDoublet	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^      static void constructDoublet(const Obj<topology_type>& topology) {$/;"	f	class:ALE::Test::OverlapTest
constructDoublet2	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^      static void constructDoublet2(const Obj<topology_type>& topology, bool interpolate = true) {$/;"	f	class:ALE::Test::OverlapTest
constructDoubletOverlap	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^      static void constructDoubletOverlap(const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap) {$/;"	f	class:ALE::Test::OverlapTest
constructFieldSplit	include/petscdmmesh_solvers.hh	/^void constructFieldSplit(const Obj<Section>& section, PetscInt numSplits, PetscInt numSplitFields[], PetscInt splitFields[], const Obj<Order>& globalOrder, Mat precon[], MatNullSpace nullsp[], Vec v, PC fieldSplit) {$/;"	f
constructInverseOrder	include/sieve/Numbering.hh	/^    void constructInverseOrder(const Obj<numbering_type>& numbering) {$/;"	f	class:ALE::NumberingFactory
constructLocalNumbering	include/sieve/INumbering.hh	/^    void constructLocalNumbering(const Obj<numbering_type>& numbering, const Obj<send_overlap_type>& sendOverlap, const Obj<Sequence_>& points) {$/;"	f	class:ALE::INumberingFactory
constructLocalNumbering	include/sieve/Numbering.hh	/^    void constructLocalNumbering(const Obj<numbering_type>& numbering, const Obj<send_overlap_type>& sendOverlap, const Iterator_& pointsBegin, const Iterator_& pointsEnd) {$/;"	f	class:ALE::NumberingFactory
constructLocalOrder	include/sieve/INumbering.hh	/^    void constructLocalOrder(const Obj<order_type>& order, const Obj<send_overlap_type>& sendOverlap, const Sequence_& points, const Obj<Section_>& section) {$/;"	f	class:ALE::INumberingFactory
constructLocalOrder	include/sieve/Numbering.hh	/^    void constructLocalOrder(const Obj<order_type>& order, const Obj<send_overlap_type>& sendOverlap, const Iterator_& pointsBegin, const Iterator_& pointsEnd, const Obj<Section_>& section, const int space = -1, const bool withBC = false, const Obj<label_type>& label = NULL) {$/;"	f	class:ALE::NumberingFactory
constructMPIType	include/sieve/Completion.hh	/^      MPI_Datatype constructMPIType() {$/;"	f	class:ALE::New::ParallelFactory
constructNumbering	include/sieve/INumbering.hh	/^    void constructNumbering(const Obj<numbering_type>& numbering, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap, const Obj<Sequence>& points) {$/;"	f	class:ALE::INumberingFactory
constructNumbering	include/sieve/Numbering.hh	/^    void constructNumbering(const Obj<numbering_type>& numbering, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap, const Iterator& pointsBegin, const Iterator& pointsEnd) {$/;"	f	class:ALE::NumberingFactory
constructOrder	include/sieve/INumbering.hh	/^    void constructOrder(const Obj<order_type>& order, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap, const Obj<Sequence>& points, const Obj<Section>& section) {$/;"	f	class:ALE::INumberingFactory
constructOrder	include/sieve/INumbering.hh	/^    void constructOrder(const Obj<order_type>& order, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap, const Sequence& points, const Obj<Section>& section) {$/;"	f	class:ALE::INumberingFactory
constructOrder	include/sieve/Numbering.hh	/^    void constructOrder(const Obj<order_type>& order, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap, const Iterator& pointsBegin, const Iterator& pointsEnd, const Obj<Section>& section, const int space = -1, const Obj<label_type>& label = NULL) {$/;"	f	class:ALE::NumberingFactory
constructOrderBC	include/sieve/Numbering.hh	/^    void constructOrderBC(const Obj<order_type>& order, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap, const Iterator& pointsBegin, const Iterator& pointsEnd, const Obj<Section>& section, const int space = -1, const Obj<label_type>& label = NULL) {$/;"	f	class:ALE::NumberingFactory
constructOverlap	include/sieve/CartesianSieve.hh	/^    void constructOverlap() {};$/;"	f	class:ALE::CartesianBundle
constructOverlap	include/sieve/Mesh.hh	/^    void constructOverlap() {$/;"	f	class:ALE::Bundle
constructOverlap	include/sieve/Mesh.hh	/^    void constructOverlap() {$/;"	f	class:ALE::IMesh
constructOverlap	include/sieve/Mesh.hh	/^    void constructOverlap(const Obj<Sequence>& points, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap) {$/;"	f	class:ALE::Bundle
constructOverlap	include/sieve/ParallelMapping.hh	/^    static void constructOverlap(const Sequence& points, Renumbering& renumbering, const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap) {$/;"	f	class:ALE::OverlapBuilder
constructOverlap	include/sieve/Topology.hh	/^    void constructOverlap(const Obj<Sequence>& points, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap) {$/;"	f	class:ALE::Topology
constructOverlap	include/sieve/Topology.hh	/^    void constructOverlap(const patch_type& patch) {$/;"	f	class:ALE::Topology
constructRemoteRenumbering	include/sieve/ParallelMapping.hh	/^    void constructRemoteRenumbering() {$/;"	f	class:ALE::PointFactory
constructRequests	include/sieve/BasicCommunication.hh	/^    void constructRequests() {$/;"	f	class:ALE::MPIMover
contains	include/sieve/ALE_containers.hh	/^    inline bool contains(const Element_& e) {return (this->find(e) != this->end());};$/;"	f	class:ALE::set
contains	include/sieve/LabelSifter.hh	/^        virtual bool contains(const source_type& s) {$/;"	f	struct:ALE::LabelSifter::__anon7::coneSequence
contains	include/sieve/Sieve.hh	/^       virtual bool contains(const typename rec_type::point_type& p) {$/;"	f	class:ALE::SieveDef::RecContainerTraits::PointSequence
contains	include/sieve/Sifter.hh	/^        virtual bool contains(const source_type& s) {$/;"	f	struct:ALE::ASifter::__anon2::coneSequence
contains	include/sieve/Sifter.hh	/^       virtual bool contains(const typename rec_type::point_type& p) {$/;"	f	class:ALE::SifterDef::RecContainerTraits::PointSequence
containsInvalidFlag	config/BuildSystem/config/setCompilers.py	/^  def containsInvalidFlag(self, output):$/;"	m	class:Configure
contiguous	include/petsc-private/isimpl.h	/^  PetscErrorCode (*contiguous)(IS,PetscInt,PetscInt,PetscInt*,PetscBool*);$/;"	m	struct:_ISOps
contiq	include/petsc-private/vecimpl.h	/^  PetscBool              contiq;$/;"	m	struct:__anon29
conv_hist	include/petsc-private/snesimpl.h	/^  PetscReal   *conv_hist;         \/* If !0, stores function norm (or$/;"	m	struct:_p_SNES
conv_hist_its	include/petsc-private/snesimpl.h	/^  PetscInt    *conv_hist_its;     \/* linear iterations for each Newton step *\/$/;"	m	struct:_p_SNES
conv_hist_len	include/petsc-private/snesimpl.h	/^  PetscInt    conv_hist_len;      \/* size of convergence history array *\/$/;"	m	struct:_p_SNES
conv_hist_max	include/petsc-private/snesimpl.h	/^  PetscInt    conv_hist_max;      \/* actual amount of data in conv_history *\/$/;"	m	struct:_p_SNES
conv_hist_reset	include/petsc-private/snesimpl.h	/^  PetscBool   conv_hist_reset;    \/* reset counter for each new SNES solve *\/$/;"	m	struct:_p_SNES
conv_malloc	include/petsc-private/snesimpl.h	/^  PetscBool   conv_malloc;$/;"	m	struct:_p_SNES
converged	include/petsc-private/kspimpl.h	/^  PetscErrorCode (*converged)(KSP,PetscInt,PetscReal,KSPConvergedReason*,void*);$/;"	m	struct:_p_KSP
converged	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*converged)(SNES,PetscInt,PetscReal,PetscReal,PetscReal,SNESConvergedReason*,void*);$/;"	m	struct:_SNESOps
convergeddestroy	include/petsc-private/kspimpl.h	/^  PetscErrorCode (*convergeddestroy)(void*);$/;"	m	struct:_p_KSP
convergeddestroy	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*convergeddestroy)(void*);$/;"	m	struct:_SNESOps
convert	include/petsc-private/matimpl.h	/^  PetscErrorCode (*convert)(Mat, MatType,MatReuse,Mat*);$/;"	m	struct:_MatOps
convertCoordinates	include/sieve/ISieve.hh	/^    static void convertCoordinates(Section& coordinates, ISection& icoordinates, Renumbering& renumbering) {$/;"	f	class:ALE::ISieveConverter
convertCoordinates	include/sieve/ISieve.hh	/^    static void convertCoordinates(Section& coordinates, PetscSection coordSection, Vec coords, Renumbering& renumbering) {$/;"	f	class:ALE::ISieveConverter
convertLabel	include/sieve/ISieve.hh	/^    static void convertLabel(DM dm, const char name[], const Obj<Label>& label, Renumbering& renumbering) {$/;"	f	class:ALE::ISieveConverter
convertLabel	include/sieve/ISieve.hh	/^    static void convertLabel(const Obj<Label>& newLabel, const Obj<Label>& oldLabel, Renumbering& renumbering) {$/;"	f	class:ALE::ISieveConverter
convertMesh	include/sieve/ISieve.hh	/^    static void convertMesh(Mesh& mesh, DM *dm, Renumbering& renumbering, bool renumber = true) {$/;"	f	class:ALE::ISieveConverter
convertMesh	include/sieve/ISieve.hh	/^    static void convertMesh(Mesh& mesh, IMesh& imesh, Renumbering& renumbering, bool renumber = true) {$/;"	f	class:ALE::ISieveConverter
convertOrientation	include/sieve/ISieve.hh	/^    static void convertOrientation(Sieve& sieve, DM dm, Renumbering& renumbering, ArrowSection *orientation) {$/;"	f	class:ALE::ISieveConverter
convertOrientation	include/sieve/ISieve.hh	/^    static void convertOrientation(Sieve& sieve, ISieve& isieve, Renumbering& renumbering, ArrowSection *orientation) {$/;"	f	class:ALE::ISieveConverter
convertPath	config/BuildSystem/build/bk.py	/^def convertPath(file):$/;"	f
convertPath	config/BuildSystem/sourceControl.py	/^  def convertPath(self, f):$/;"	m	class:BitKeeper
convertSieve	include/sieve/ISieve.hh	/^    static void convertSieve(Sieve& sieve, DM dm, Renumbering& renumbering, bool renumber = true) {$/;"	f	class:ALE::ISieveConverter
convertSieve	include/sieve/ISieve.hh	/^    static void convertSieve(Sieve& sieve, ISieve& isieve, Renumbering& renumbering, bool renumber = true) {$/;"	f	class:ALE::ISieveConverter
convertfrom	include/petsc-private/matimpl.h	/^  PetscErrorCode (*convertfrom)(Mat, MatType,MatReuse,Mat*);$/;"	m	struct:_MatOps
coor_xl	include/petsc-private/drawimpl.h	/^  PetscReal       coor_xl,coor_yl,coor_xr,coor_yr;$/;"	m	struct:_p_PetscDraw
coor_xr	include/petsc-private/drawimpl.h	/^  PetscReal       coor_xl,coor_yl,coor_xr,coor_yr;$/;"	m	struct:_p_PetscDraw
coor_yl	include/petsc-private/drawimpl.h	/^  PetscReal       coor_xl,coor_yl,coor_xr,coor_yr;$/;"	m	struct:_p_PetscDraw
coor_yr	include/petsc-private/drawimpl.h	/^  PetscReal       coor_xl,coor_yl,coor_xr,coor_yr;$/;"	m	struct:_p_PetscDraw
coordSection	include/petsc-private/meshimpl.h	/^  PetscSection         coordSection;   \/* Layout for coordinates *\/$/;"	m	struct:__anon16
coordinateDM	include/petsc-private/dmimpl.h	/^  DM                      coordinateDM;         \/* Layout for coordinates (default section) *\/$/;"	m	struct:_p_DM
coordinatename	include/petsc-private/dmdaimpl.h	/^  char                  **coordinatename;      \/* names of coordinate directions, for example, x, y, z *\/$/;"	m	struct:__anon23
coordinates	include/petsc-private/dmimpl.h	/^  Vec                     coordinates;          \/* Coordinate values in global vector *\/$/;"	m	struct:_p_DM
coordinates	include/petsc-private/meshimpl.h	/^  Vec                  coordinates;    \/* Coordinate values *\/$/;"	m	struct:__anon16
coordinates	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^Obj<real_section_type>               coordinates;$/;"	m	class:ALE::Hierarchy::HierarchyBuilder
coordinatesLocal	include/petsc-private/dmimpl.h	/^  Vec                     coordinatesLocal;     \/* Coordinate values in local  vector *\/$/;"	m	struct:_p_DM
coordinatetopixel	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*coordinatetopixel)(PetscDraw,PetscReal,PetscReal,PetscInt*,PetscInt*);$/;"	m	struct:_PetscDrawOps
coords	include/petscdm.h	/^  Vec        coords; \/* The point coordinates *\/$/;"	m	struct:_DMInterpolationInfo
coords	include/petscdmmesh.h	/^  Vec        coords; \/* The point coordinates *\/$/;"	m	struct:_DMMeshInterpolationInfo
coords	include/petscdmmesh_formats.hh	/^      double      *coords;   \/\/ The vertex coordinates$/;"	m	class:ALE::Dolfin::XMLMesh
copy	config/BuildSystem/config/compile/C.py	/^  def copy(self, other):$/;"	m	class:DynamicLinker
copy	config/BuildSystem/config/compile/C.py	/^  def copy(self, other):$/;"	m	class:Linker
copy	config/BuildSystem/config/compile/C.py	/^  def copy(self, other):$/;"	m	class:SharedLinker
copy	config/BuildSystem/config/compile/Cxx.py	/^  def copy(self, other):$/;"	m	class:Linker
copy	config/BuildSystem/config/compile/Cxx.py	/^  def copy(self, other):$/;"	m	class:SharedLinker
copy	config/BuildSystem/config/compile/FC.py	/^  def copy(self, other):$/;"	m	class:Linker
copy	config/BuildSystem/config/compile/processor.py	/^  def copy(self, other):$/;"	m	class:Processor
copy	config/BuildSystem/config/setsBackport.py	/^    def copy(self):$/;"	m	class:BaseSet
copy	config/BuildSystem/config/setsOrdered.py	/^    def copy(self):$/;"	m	class:BaseSet
copy	config/BuildSystem/patch.py	/^import copy$/;"	i
copy	config/cmakegen.py	/^            import copy$/;"	i
copy	config/cmakegen.py	/^        def copy(self):$/;"	m	class:defaultdict
copy	include/petsc-private/isimpl.h	/^  PetscErrorCode (*copy)(IS,IS);$/;"	m	struct:_ISOps
copy	include/petsc-private/matimpl.h	/^  PetscErrorCode (*copy)(Mat,Mat,MatStructure);$/;"	m	struct:_MatOps
copy	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*copy)(Vec,Vec);                     \/* y = x *\/$/;"	m	struct:_VecOps
copy	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*copy)(VecScatter,VecScatter);$/;"	m	struct:_p_VecScatter
copy	include/sieve/ALE_mem.hh	/^  Obj<X,A>& Obj<X,A>::copy(const Obj<Y>& obj) {$/;"	f	class:ALE::Obj
copy	include/sieve/Field.hh	/^    void copy(const Obj<ConstantSection>& section) {$/;"	f	class:ALE::ConstantSection
copy	include/sieve/Field.hh	/^    void copy(const Obj<FauxConstantSection>& section) {$/;"	f	class:ALE::FauxConstantSection
copy	include/sieve/Field.hh	/^    void copy(const Obj<NewUniformSection>& section) {$/;"	f	class:ALE::NewUniformSection
copy	include/sieve/Field.hh	/^    void copy(const Obj<UniformSection>& section) {$/;"	f	class:ALE::UniformSection
copy	include/sieve/IField.hh	/^    void copy(const Obj<IConstantSection>& section) {$/;"	f	class:ALE::IConstantSection
copy	include/sieve/IField.hh	/^    void copy(const Obj<IUniformSection>& section) {$/;"	f	class:ALE::IUniformSection
copy	include/sieve/Mesh.hh	/^    void copy(const Obj<IMesh>& m) {$/;"	f	class:ALE::IMesh
copy	include/sieve/Mesh.hh	/^    void copy(const Obj<Mesh>& m) {$/;"	f	class:ALE::Mesh
copy	include/sieve/Overlap.hh	/^  void copy(Overlap *o) {$/;"	f	class:PETSc::Overlap
copy	include/sieve/Overlap.hh	/^  void copy(RecvOverlap *overlap) {$/;"	f	class:PETSc::RecvOverlap
copy	include/sieve/Overlap.hh	/^  void copy(SendOverlap *overlap) {$/;"	f	class:PETSc::SendOverlap
copy	include/sieve/ParallelMapping.hh	/^      static void copy(const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<BaseSection<Sieve_> >& sendSection, const Obj<ConstantSection<ALE::Pair<int, typename SendOverlap::source_type>, int> >& recvSection) {$/;"	f	class:ALE::Pullback::SimpleCopy
copy	include/sieve/ParallelMapping.hh	/^      static void copy(const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<BaseSectionV<Sieve_> >& sendSection, const Obj<ConstantSection<ALE::Pair<int, typename SendOverlap::source_type>, int> >& recvSection) {$/;"	f	class:ALE::Pullback::SimpleCopy
copy	include/sieve/ParallelMapping.hh	/^      static void copy(const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<ConstantSection<MinimalArrow<typename SendOverlap::source_type,typename SendOverlap::source_type>, Value> >& sendSection, const Obj<ConstantSection<MinimalArrow<typename SendOverlap::source_type,typename SendOverlap::source_type>, Value> >& recvSection) {$/;"	f	class:ALE::Pullback::SimpleCopy
copy	include/sieve/ParallelMapping.hh	/^      static void copy(const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<ConstantSection<typename SendOverlap::source_type, Value> >& sendSection, const Obj<ConstantSection<ALE::Pair<int, typename SendOverlap::source_type>, Value> >& recvSection) {$/;"	f	class:ALE::Pullback::SimpleCopy
copy	include/sieve/ParallelMapping.hh	/^      static void copy(const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<IConstantSection<typename SendOverlap::source_type, Value> >& sendSection, const Obj<ConstantSection<ALE::Pair<int, typename SendOverlap::source_type>, Value> >& recvSection) {$/;"	f	class:ALE::Pullback::SimpleCopy
copy	include/sieve/ParallelMapping.hh	/^      static void copy(const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<IConstantSection<typename SendOverlap::source_type, Value> >& sendSection, const Obj<IConstantSection<typename SendOverlap::source_type, Value> >& recvSection) {$/;"	f	class:ALE::Pullback::SimpleCopy
copy	include/sieve/ParallelMapping.hh	/^      static void copy(const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<LabelBaseSection<Sieve_, Label_> >& sendSection, const Obj<ConstantSection<ALE::Pair<int, typename SendOverlap::source_type>, int> >& recvSection) {$/;"	f	class:ALE::Pullback::SimpleCopy
copy	include/sieve/ParallelMapping.hh	/^      static void copy(const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<LabelBaseSectionV<Sieve_, Label_> >& sendSection, const Obj<ConstantSection<ALE::Pair<int, typename SendOverlap::source_type>, int> >& recvSection) {$/;"	f	class:ALE::Pullback::SimpleCopy
copy	include/sieve/ParallelMapping.hh	/^      static void copy(const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<Section>& sendSection, const Obj<Section>& recvSection, const MPI_Datatype datatype = MPI_DATATYPE_NULL) {$/;"	f	class:ALE::Pullback::SimpleCopy
copy	include/sieve/ParallelMapping.hh	/^      static void copy(const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<SendSection>& sendSection, const Obj<RecvSection>& recvSection, const MPI_Datatype datatype = MPI_DATATYPE_NULL) {$/;"	f	class:ALE::Pullback::SimpleCopy
copy	include/sieve/ParallelMapping.hh	/^      static void copy(const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<UniformSection<MinimalArrow<int,int>,int> >& sendSection, const Obj<UniformSection<MinimalArrow<int,int>,int> >& recvSection, const MPI_Datatype datatype = MPI_DATATYPE_NULL) {$/;"	f	class:ALE::Pullback::SimpleCopy
copy	include/sieve/Sieve.hh	/^      Obj<Sieve> copy() {$/;"	f	class:ALE::Sieve
copy	include/sieve/Sifter.hh	/^    void copy(ASifter *newSifter) {$/;"	f	class:ALE::ASifter
copyBC	include/sieve/Field.hh	/^    void copyBC(const Obj<OtherSection>& section) {$/;"	f	class:ALE::GeneralSection
copyBC	include/sieve/Field.hh	/^    void copyBC(const Obj<Section>& section) {$/;"	f	class:ALE::Section
copyConstant	include/sieve/ParallelMapping.hh	/^      static void copyConstant(const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<SendSection>& sendSection, const Obj<RecvSection>& recvSection) {$/;"	f	class:ALE::Pullback::SimpleCopy
copyConstantArrow	include/sieve/ParallelMapping.hh	/^      static void copyConstantArrow(const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<SendSection>& sendSection, const Obj<RecvSection>& recvSection) {$/;"	f	class:ALE::Pullback::SimpleCopy
copyCustomAtlas	include/sieve/Field.hh	/^    int copyCustomAtlas(const Obj<GeneralSection>& section, const int tag) {$/;"	f	class:ALE::GeneralSection
copyFibration	include/sieve/Field.hh	/^    void copyFibration(const Obj<FEMSection>& section) {$/;"	f	class:ALE::FEMSection
copyHoles	include/sieve/Mesh.hh	/^    void copyHoles(const Obj<IMesh>& m) {$/;"	f	class:ALE::IMesh
copyHoles	include/sieve/Mesh.hh	/^    void copyHoles(const Obj<Mesh>& m) {$/;"	f	class:ALE::Mesh
copyIConstant	include/sieve/ParallelMapping.hh	/^      static void copyIConstant(const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<SendSection>& sendSection, const Obj<RecvSection>& recvSection) {$/;"	f	class:ALE::Pullback::SimpleCopy
copyLib	config/install.py	/^  def copyLib(self, src, dst):$/;"	m	class:Installer
copyLog	config/BuildSystem/regression/buildtest.py	/^  def copyLog(self):$/;"	m	class:RemoteBuild
copySpaces	include/sieve/Field.hh	/^    void copySpaces(const Obj<OtherSection>& section) {$/;"	f	class:ALE::GeneralSection
copy_length	include/petsc-private/vecimpl.h	/^  PetscInt       copy_length;$/;"	m	struct:__anon26
copy_start	include/petsc-private/vecimpl.h	/^  PetscInt       copy_start;   \/* local scatter is a copy starting at copy_start *\/$/;"	m	struct:__anon26
copytree	config/install.py	/^  def copytree(self, src, dst, symlinks = False, copyFunc = shutil.copy2):$/;"	m	class:Installer
cost	include/petsc-private/tsimpl.h	/^    PetscReal  cost[16];         \/* relative measure of the amount of work required for each scheme *\/$/;"	m	struct:_p_TSAdapt::__anon8
count	include/petsc-private/bagimpl.h	/^  PetscInt     count;$/;"	m	struct:_n_PetscBag
count	include/petsc-private/petscfptimpl.h	/^  PetscInt count;$/;"	m	struct:_n_PetscFPT
count	include/petsc-private/vecimpl.h	/^  PetscMPIInt    *count;        \/* elements of vector on each processor *\/$/;"	m	struct:__anon28
count	include/petscctable.h	/^  PetscInt count;$/;"	m	struct:_n_PetscTable
count	include/petsclog.h	/^  int            count;         \/* The number of times this event was executed *\/$/;"	m	struct:__anon65
count	include/sieve/ISieve.hh	/^    size_t count(const point_type& p) const {return ((p >= _min) && (p < _max)) ? 1 : 0;};$/;"	f	class:ALE::Interval
count	include/sieve/Sections.hh	/^      int count(const point_type& point) const {return 1;};$/;"	f	class:ALE::New::PartitionDomain
counts	include/petsc-private/vecimpl.h	/^  PetscMPIInt            *counts,*displs;$/;"	m	struct:__anon29
cpFile	config/BuildSystem/build/framework.py	/^  def cpFile(self, localFile, remoteDirectory, remoteFile = None, recursive = 0):$/;"	m	class:Framework
cpWebsite	config/BuildSystem/build/framework.py	/^  def cpWebsite(self, localFile, remoteFile = None, recursive = 0):$/;"	m	class:Framework
cpp	include/petsc-private/petscimpl.h	/^  void                 *cpp;$/;"	m	struct:_p_PetscObject
create	config/BuildSystem/RDict.py	/^  import build.buildGraph # This is necessary for us to create BuildGraph objects on load$/;"	i
create	config/BuildSystem/RDict.py	/^  import project          # This is necessary for us to create Project objects on load$/;"	i
create	include/petsc-private/matimpl.h	/^  PetscErrorCode (*create)(Mat);$/;"	m	struct:_MatOps
create	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*create)(Vec);$/;"	m	struct:_VecOps
create	include/sieve/ALE_mem.hh	/^    pointer create(const value_type& x = value_type()) {$/;"	f	class:ALE::malloc_allocator
create	include/sieve/ALE_mem.hh	/^  Obj<X,A>& Obj<X,A>::create(const X& x) {$/;"	f	class:ALE::Obj
create	include/sieve/ALE_mem.hh	/^  T* logged_allocator<T, O>::create(const T& _val) {$/;"	f	class:ALE::logged_allocator
create	include/sieve/ALE_mem.hh	/^  T* polymorphic_allocator<T>::create(const T& _val) {$/;"	f	class:ALE::polymorphic_allocator
createAllocationVectors	include/petscdmmesh.hh	/^PetscErrorCode createAllocationVectors(const int bs, const ALE::Obj<Atlas>& atlas, const ALE::Obj<Order>& globalOrder, const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar>::sieve_type>& adjGraph, PetscBool isSymmetric, PetscInt dnz[], PetscInt onz[])$/;"	f
createAnnularBoundary	include/sieve/Mesh.hh	/^    static Obj<Mesh> createAnnularBoundary(const MPI_Comm comm, const int segments, const real centers[4], const real radii[2], const int debug = 0) {$/;"	f	class:ALE::MeshBuilder
createArgDB	config/BuildSystem/args.py	/^  def createArgDB(self, initDB):$/;"	m	class:ArgumentProcessor
createAssignment	include/sieve/Distribution.hh	/^    static typename Partitioner::part_type *createAssignment(const Obj<bundle_type>& bundle, const int dim, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap, const int height = 0) {$/;"	f	class:ALE::Distribution
createBasketMesh	include/sieve/DMBuilder.hh	/^    static PetscErrorCode createBasketMesh(MPI_Comm comm, const int dim, const bool structured, const bool interpolate, const int debug, DM *dm) {$/;"	f	class:ALE::DMBuilder
createBoxMesh	include/sieve/DMBuilder.hh	/^    static PetscErrorCode createBoxMesh(MPI_Comm comm, const int dim, const bool structured, const bool interpolate, const int debug, DM *dm) {$/;"	f	class:ALE::DMBuilder
createCartesianMesh	include/sieve/CartesianSieve.hh	/^    static Obj<CartesianMesh> createCartesianMesh(const MPI_Comm comm, const int dim, const int numCells[], const int partitions[], const int debug = 0) {$/;"	f	class:ALE::CartesianMeshBuilder
createCellCoordinates	include/sieve/Partitioner.hh	/^      void createCellCoordinates(const int numVertices, Float *X[], Float *Y[], Float *Z[]) const {$/;"	f	class:ALE::Partitioner::MeshManager
createCells	include/sieve/Partitioner.hh	/^      void createCells(const int height) {$/;"	f	class:ALE::Partitioner::MeshManager
createChildren	config/BuildSystem/config/framework.py	/^  def createChildren(self):$/;"	m	class:Framework
createCircularReentrantBoundary	include/sieve/Mesh.hh	/^    static Obj<Mesh> createCircularReentrantBoundary(const MPI_Comm comm, const int segments, const real radius, const real arc_percent, const int debug = 0) {$/;"	f	class:ALE::MeshBuilder
createClient	config/BuildSystem/config/compile/SIDL.py	/^  def createClient(self, source, outputFiles):$/;"	m	class:Compiler
createClientShell	config/BuildSystem/config/compile/SIDL.py	/^  def createClientShell(self, source, outputFiles):$/;"	m	class:Compiler
createCmdLine	src/dm/impls/mesh/examples/tests/memoryTests.py	/^  def createCmdLine(self, numProcs, test, num, numCells):$/;"	m	class:MemoryTests
createCmdLine	src/dm/impls/mesh/examples/tests/sieveTests.py	/^  def createCmdLine(self, test, numProcs, num):$/;"	m	class:SieveTests
createCubeBoundary	include/sieve/Mesh.hh	/^    static Obj<Mesh> createCubeBoundary(const MPI_Comm comm, const real lower[], const real upper[], const int faces[], const int debug = 0) {$/;"	f	class:ALE::MeshBuilder
createDistributionMeshOverlap	include/sieve/Partitioner.hh	/^    static void createDistributionMeshOverlap(const Obj<Section>& partition, const Obj<RecvPartOverlap>& recvPartOverlap, Renumbering& renumbering, const Obj<Section>& overlapPartition, const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap) {$/;"	f	class:ALE::Partitioner
createDistributionPartOverlap	include/sieve/Partitioner.hh	/^    static void createDistributionPartOverlap(const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap) {$/;"	f	class:ALE::Partitioner
createDoubletSieveBottomUp	src/dm/impls/mesh/examples/tests/ex02.c	/^PetscErrorCode createDoubletSieveBottomUp(MPI_Comm comm, ALE::Sieve **doublet_p)$/;"	f
createDoubletSieveTopDown	src/dm/impls/mesh/examples/tests/ex02.c	/^PetscErrorCode createDoubletSieveTopDown(MPI_Comm comm, ALE::Sieve **doublet_p)$/;"	f
createFaceQuadrature	config/PETSc/FEM.py	/^  def createFaceQuadrature(self, shape, degree):$/;"	m	class:QuadratureGenerator
createFicheraCornerBoundary	include/sieve/Mesh.hh	/^    static Obj<Mesh> createFicheraCornerBoundary(const MPI_Comm comm, const real lower[], const real upper[], const real offset[], const int debug = 0) {$/;"	f	class:ALE::MeshBuilder
createForkXSieve	src/dm/impls/mesh/examples/tests/xsieveTest.hh	/^      static ALE::Obj<default_xsieve_type> createForkXSieve(const MPI_Comm& comm, const ALE::ArgDB& argDB) {$/;"	f	struct:ALE::Test::XSieveTester
createHatISifter	src/dm/impls/mesh/examples/tests/unitTests.hh	/^      static void createHatISifter(MPI_Comm comm, ISifter& sifter, const int baseSize = 10, const int debug = 0) {$/;"	f	class:ALE::Test::SifterBuilder
createHatSifter	src/dm/impls/mesh/examples/tests/unitTests.hh	/^      static Obj<SifterType> createHatSifter(MPI_Comm comm, const int baseSize = 10, const int debug = 0) {$/;"	f	class:ALE::Test::SifterBuilder
createHatXSieve	src/dm/impls/mesh/examples/tests/xsieveTest.hh	/^      static ALE::Obj<default_xsieve_type> createHatXSieve(const MPI_Comm& comm, const ALE::ArgDB& argDB) {$/;"	f	struct:ALE::Test::XSieveTester
createIndices	include/sieve/ISieve.hh	/^    void createIndices() {$/;"	f	class:ALE::IFSieve
createLabel	include/sieve/Mesh.hh	/^    const Obj<label_type>& createLabel(const std::string& name) {$/;"	f	class:ALE::Bundle
createLabel	include/sieve/Mesh.hh	/^    const Obj<label_type>& createLabel(const std::string& name) {$/;"	f	class:ALE::IBundle
createLabel	include/sieve/Topology.hh	/^    const Obj<patch_label_type>& createLabel(const patch_type& patch, const std::string& name) {$/;"	f	class:ALE::Topology
createLocalAdjacencyGraph	include/petscdmmesh.hh	/^PetscErrorCode createLocalAdjacencyGraph(const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar> >& mesh, const ALE::Obj<Atlas>& atlas, const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar>::sieve_type>& adjGraph)$/;"	f
createLocalAdjacencyGraph	include/petscdmmesh.hh	/^PetscErrorCode createLocalAdjacencyGraph(const ALE::Obj<Mesh>& mesh, const ALE::Obj<Atlas>& atlas, const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar>::sieve_type>& adjGraph)$/;"	f
createLocalAdjacencyGraphI	include/petscdmmesh.hh	/^PetscErrorCode createLocalAdjacencyGraphI(const ALE::Obj<Mesh>& mesh, const ALE::Obj<Atlas>& atlas, const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar>::sieve_type>& adjGraph)$/;"	f
createLocalLabelV	include/sieve/Partitioner.hh	/^    static void createLocalLabelV(const Obj<Sieve>& sieve, const Obj<Section>& partition, Renumbering& renumbering, const Obj<Sieve>& localSieve, const int height = 0) {$/;"	f	class:ALE::Partitioner
createLocalMesh	include/sieve/Partitioner.hh	/^    static void createLocalMesh(const Obj<Mesh>& mesh, const Obj<Section>& partition, Renumbering& renumbering, const Obj<Mesh>& localMesh, const int height = 0) {$/;"	f	class:ALE::Partitioner
createLocalMeshV	include/sieve/Partitioner.hh	/^    static void createLocalMeshV(const Obj<Mesh>& mesh, const Obj<Section>& partition, Renumbering& renumbering, const Obj<Mesh>& localMesh, const int height = 0) {$/;"	f	class:ALE::Partitioner
createLocalSection	include/sieve/Partitioner.hh	/^    static void createLocalSection(const Obj<OldSection>& oldSection, const Obj<Partition>& partition, Renumbering& renumbering, const Obj<NewSection>& newSection) {$/;"	f	class:ALE::Partitioner
createLocalSection	include/sieve/Partitioner.hh	/^    static void createLocalSection(const Obj<OldSection>& oldSection, const Obj<Partition>& partition, Renumbering& renumbering, const Obj<UniformSection<MinimalArrow<int,int>,int> >& newSection) {$/;"	f	class:ALE::Partitioner
createLocalSieve	include/sieve/Partitioner.hh	/^    static void createLocalSieve(const Obj<Sieve>& sieve, const Obj<Section>& partition, Renumbering& renumbering, const Obj<Sieve>& localSieve, const int height = 0) {$/;"	f	class:ALE::Partitioner
createLocalSieveV	include/sieve/Partitioner.hh	/^    static void createLocalSieveV(const Obj<Sieve>& sieve, const Obj<Section>& partition, Renumbering& renumbering, const Obj<Sieve>& localSieve, const int height = 0) {$/;"	f	class:ALE::Partitioner
createLocalSifter	include/sieve/Partitioner.hh	/^    static void createLocalSifter(const Obj<Sifter>& sifter, const Obj<Section>& partition, Renumbering& renumbering, const Obj<Sifter>& localSifter) {$/;"	f	class:ALE::Partitioner
createLog	config/BuildSystem/logger.py	/^  def createLog(self, logName, initLog = None):$/;"	m	class:Logger
createMesh	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^  void createMesh(const int dim, const bool interpolate) {$/;"	f	class:FunctionTestDistribution
createMesh	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  void createMesh(const int dim, const bool interpolate) {$/;"	f	class:FunctionTestIDistribution
createMeshEvent	src/dm/impls/mesh/examples/tests/ex1.c	/^  PetscLogEvent createMeshEvent;$/;"	m	struct:__anon16	file:
createMeshEvent	src/dm/impls/mesh/examples/tests/ex2.c	/^  PetscLogEvent createMeshEvent;$/;"	m	struct:__anon17	file:
createMeshEvent	src/dm/impls/mesh/examples/tests/ex3.c	/^  PetscLogEvent createMeshEvent;$/;"	m	struct:__anon15	file:
createMeshEvent	src/dm/impls/moab/examples/tests/ex1.cxx	/^  PetscLogEvent createMeshEvent;$/;"	m	class:AppCtx	file:
createMeshEvent	src/dm/impls/plex/examples/tests/ex1.c	/^  PetscLogEvent createMeshEvent;$/;"	m	struct:__anon4	file:
createMeshEvent	src/dm/impls/plex/examples/tests/ex3.c	/^  PetscLogEvent createMeshEvent;$/;"	m	struct:__anon3	file:
createOperator	include/petscdmmesh.hh	/^void createOperator(const ALE::Obj<Mesh>& mesh, const ALE::Obj<Section>& s, const ALE::Obj<Mesh>& op) {$/;"	f
createOrderingClosureV	include/sieve/Ordering.hh	/^    static void createOrderingClosureV(const Obj<Mesh>& mesh, const Obj<Section>& pointPermutation, const Obj<Section>& permutation, const Obj<Section>& invPermutation, const int height = 0) {$/;"	f	class:ALE::Ordering
createParticleInCubeBoundary	include/sieve/Mesh.hh	/^    static Obj<Mesh> createParticleInCubeBoundary(const MPI_Comm comm, const real lower[], const real upper[], const int faces[], const real radius, const int thetaEdges, const int phiSlices, const int debug = 0) {$/;"	f	class:ALE::MeshBuilder
createParticleInSquareBoundary	include/sieve/Mesh.hh	/^    static Obj<Mesh> createParticleInSquareBoundary(const MPI_Comm comm, const real lower[], const real upper[], const int edges[], const real radius, const int partEdges, const int debug = 0) {$/;"	f	class:ALE::MeshBuilder
createPartition	include/sieve/Partitioner.hh	/^    static void createPartition(const Obj<Mesh>& mesh, const Obj<Section>& partition, const int height = 0) {$/;"	f	class:ALE::Partitioner
createPartitionClosure	include/sieve/Partitioner.hh	/^    static void createPartitionClosure(const Obj<Mesh>& mesh, const Obj<Section>& pointPartition, const Obj<Section>& partition, const int height = 0) {$/;"	f	class:ALE::Partitioner
createPartitionClosureV	include/sieve/Partitioner.hh	/^    static PetscErrorCode createPartitionClosureV(const Obj<Mesh>& mesh, PetscSection pointSection, IS pointPartition, PetscSection *section, IS *partition, const int height = 0) {$/;"	f	class:ALE::Partitioner
createPartitionClosureV	include/sieve/Partitioner.hh	/^    static void createPartitionClosureV(const Obj<Mesh>& mesh, const Obj<Section>& pointPartition, const Obj<Section>& partition, const int height = 0) {$/;"	f	class:ALE::Partitioner
createPartitionMap	include/sieve/Partitioner.hh	/^    static void createPartitionMap(const Obj<Section>& partition, const Obj<MapSection>& partitionMap) {$/;"	f	class:ALE::Partitioner
createPartitionOverlap	include/sieve/Distribution.hh	/^    static void createPartitionOverlap(const Obj<bundle_type>& bundle, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap) {$/;"	f	class:ALE::Distribution
createPartitionPartOverlap	include/sieve/Partitioner.hh	/^    static void createPartitionPartOverlap(const Obj<Section>& partition, const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap) {$/;"	f	class:ALE::Partitioner
createPartitionV	include/sieve/Partitioner.hh	/^    static void createPartitionV(const Obj<Mesh>& mesh, const Obj<Section>& partition, const int height = 0) {$/;"	f	class:ALE::Partitioner
createPoints	include/sieve/ISieve.hh	/^    void createPoints() {$/;"	f	class:ALE::IFSieve
createPrismBoundary	include/sieve/Mesh.hh	/^    static Obj<Mesh> createPrismBoundary(const MPI_Comm comm, const real lower[], const real upper[], const int debug = 0) {$/;"	f	class:ALE::MeshBuilder
createQuadrature	config/PETSc/FEM.py	/^  def createQuadrature(self, shape, degree):$/;"	m	class:QuadratureGenerator
createRecvTopology	include/sieve/SectionCompletion.hh	/^      static Obj<topology_type> createRecvTopology(const Obj<RecvOverlap>& recvOverlap) {$/;"	f	class:ALE::New::SectionCompletion
createReentrantBoundary	include/sieve/Mesh.hh	/^    static Obj<Mesh> createReentrantBoundary(const MPI_Comm comm, const real lower[], const real upper[], real notchpercent[], const int debug = 0) {$/;"	f	class:ALE::MeshBuilder
createReentrantBoxMesh	include/sieve/DMBuilder.hh	/^    static PetscErrorCode createReentrantBoxMesh(MPI_Comm comm, const int dim, const bool interpolate, const int debug, DM *dm) {$/;"	f	class:ALE::DMBuilder
createReentrantSphericalMesh	include/sieve/DMBuilder.hh	/^    static PetscErrorCode createReentrantSphericalMesh(MPI_Comm comm, const int dim, const bool interpolate, const int debug, DM *dm) {$/;"	f	class:ALE::DMBuilder
createReorder	include/sieve/FEMProblem.hh	/^      virtual void createReorder() {$/;"	f	class:ALE::Problem::GeneralDiscretization
createReorder	include/sieve/FEMProblem.hh	/^      virtual void createReorder() {$/;"	f	class:ALE::Problem::GenericFormSubProblem
createReorder	include/sieve/UFCProblem.hh	/^      virtual void createReorder () {$/;"	f	class:ALE::Problem::UFCFormSubProblem
createReorder	include/sieve/UFCProblem.hh	/^      virtual void createReorder() {$/;"	f	class:ALE::Problem::UFCDiscretization
createSendTopology	include/sieve/SectionCompletion.hh	/^      static Obj<topology_type> createSendTopology(const Obj<SendOverlap>& sendOverlap) {$/;"	f	class:ALE::New::SectionCompletion
createServer	config/BuildSystem/config/compile/SIDL.py	/^  def createServer(self, source, outputFiles):$/;"	m	class:Compiler
createServerShell	config/BuildSystem/config/compile/SIDL.py	/^  def createServerShell(self, source, outputFiles):$/;"	m	class:Compiler
createSphericalMesh	include/sieve/DMBuilder.hh	/^    static PetscErrorCode createSphericalMesh(MPI_Comm comm, const int dim, const bool interpolate, const int debug, DM *dm) {$/;"	f	class:ALE::DMBuilder
createSquareBoundary	include/sieve/Mesh.hh	/^    static Obj<Mesh> createSquareBoundary(const MPI_Comm comm, const real lower[], const real upper[], const int edges, const int debug = 0) {$/;"	f	class:ALE::MeshBuilder
createSquareBoundary	include/sieve/Mesh.hh	/^    static Obj<Mesh> createSquareBoundary(const MPI_Comm comm, const real lower[], const real upper[], const int edges[], const int debug = 0) {$/;"	f	class:ALE::MeshBuilder
createTetrahedralMesh	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void createTetrahedralMesh(bool interpolate, ALE::Obj<ALE::Mesh>& m, std::map<ALE::Mesh::point_type,sieve_type::point_type>& renumbering) {$/;"	f	class:FunctionTestISieve
createTmpDir	config/BuildSystem/build/framework.py	/^  def createTmpDir(self):$/;"	m	class:Framework
createTreeXSieve	src/dm/impls/mesh/examples/tests/xsieveTest.hh	/^      static ALE::Obj<symmetric_xsieve_type> createTreeXSieve(const MPI_Comm& comm, const ALE::ArgDB& argDB) {$/;"	f	struct:ALE::Test::XSieveTester
createTriangularMesh	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void createTriangularMesh(bool interpolate, ALE::Obj<ALE::Mesh>& m, std::map<ALE::Mesh::point_type,sieve_type::point_type>& renumbering) {$/;"	f	class:FunctionTestISieve
createUninstaller	config/install.py	/^  def createUninstaller(self):$/;"	m	class:Installer
createcoordinatedm	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*createcoordinatedm)(DM,DM*);$/;"	m	struct:_DMOps
createddscatters	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*createddscatters)(DM,PetscInt,DM*,VecScatter**,VecScatter**,VecScatter**);$/;"	m	struct:_DMOps
createdomaindecomposition	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*createdomaindecomposition)(DM,PetscInt*,char***,IS**,IS**,DM**);$/;"	m	struct:_DMOps
createfielddecomposition	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*createfielddecomposition)(DM,PetscInt*,char***,IS**,DM**);$/;"	m	struct:_DMOps
createfieldis	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*createfieldis)(DM,PetscInt*,char***,IS**);$/;"	m	struct:_DMOps
createglobalvector	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*createglobalvector)(DM,Vec*);$/;"	m	struct:_DMOps
createinterpolation	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*createinterpolation)(DM,DM,Mat*,Vec*);$/;"	m	struct:_DMOps
createlocalvector	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*createlocalvector)(DM,Vec*);$/;"	m	struct:_DMOps
creatematrix	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*creatematrix)(DM, MatType,Mat*);$/;"	m	struct:_DMOps
createsubdm	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*createsubdm)(DM,PetscInt,PetscInt*,IS*,DM*);$/;"	m	struct:_DMOps
creations	include/petsclog.h	/^  int            creations;    \/* The number of objects of this class created *\/$/;"	m	struct:__anon63
csr_matrix	bin/pythonscripts/PetscBinaryIO.py	/^        from scipy.sparse import csr_matrix$/;"	i
ctr	include/petsc-private/threadcommimpl.h	/^  PetscInt               ctr;                               \/* Global Reduction counter *\/$/;"	m	struct:_p_PetscThreadCommReduction
ctr	include/petsc-private/threadcommimpl.h	/^  PetscInt ctr;                                         \/* job counter *\/$/;"	m	struct:_p_PetscThreadCommJobQueue
ctx	include/petsc-private/dmimpl.h	/^  void                    *ctx;    \/* a user context *\/$/;"	m	struct:_p_DM
ctx	include/petsc-private/dmimpl.h	/^  void *ctx;$/;"	m	struct:_DMCoarsenHookLink
ctx	include/petsc-private/dmimpl.h	/^  void *ctx;$/;"	m	struct:_DMGlobalToLocalHookLink
ctx	include/petsc-private/dmimpl.h	/^  void *ctx;$/;"	m	struct:_DMRefineHookLink
ctx	include/petsc-private/dmimpl.h	/^  void *ctx;$/;"	m	struct:_DMSubDomainHookLink
ctx	include/petsc-private/petscimpl.h	/^  void *ctx;$/;"	m	struct:__anon13
ctxdestroy	include/petsc-private/dmimpl.h	/^  PetscErrorCode          (*ctxdestroy)(void**);$/;"	m	struct:_p_DM
ctype	include/petsc-private/matimpl.h	/^  ISColoringType ctype;            \/* IS_COLORING_GLOBAL or IS_COLORING_GHOSTED *\/$/;"	m	struct:_p_MatFDColoring
ctype	include/petsc-private/matimpl.h	/^  ISColoringType ctype;            \/* IS_COLORING_GLOBAL or IS_COLORING_GHOSTED *\/$/;"	m	struct:_p_MatTransposeColoring
ctype	include/petscis.h	/^  ISColoringType  ctype;$/;"	m	struct:_n_ISColoring
curStage	include/petsclog.h	/^  int              curStage;    \/* The current stage (only used in macros so we don't call PetscIntStackTop) *\/$/;"	m	struct:_n_PetscStageLog
curl	include/petsc-private/kspimpl.h	/^typedef struct {PetscInt model,curl,maxl;Mat mat; KSP ksp;}* KSPGuessFischer;$/;"	m	struct:__anon18
curl	include/petscksp.h	/^typedef struct _p_KSPFischerGuess {PetscInt method,curl,maxl,refcnt;PetscBool  monitor;Mat mat; KSP ksp;}* KSPFischerGuess;$/;"	m	struct:_p_KSPFischerGuess
currentMax	include/sieve/ParallelMapping.hh	/^    point_type       currentMax;$/;"	m	class:ALE::PointFactory
currentcolor	include/petsc-private/matimpl.h	/^  PetscInt       currentcolor;     \/* color for which function evaluation is being done now *\/$/;"	m	struct:_p_MatFDColoring
currentcolor	include/petsc-private/matimpl.h	/^  PetscInt       currentcolor;     \/* color for which function evaluation is being done now *\/$/;"	m	struct:_p_MatTransposeColoring
currentpoint	include/petsc-private/drawimpl.h	/^  PetscInt        currentpoint;$/;"	m	struct:_p_PetscDraw
currentpoint_x	include/petsc-private/drawimpl.h	/^  PetscReal       currentpoint_x[20],currentpoint_y[20];$/;"	m	struct:_p_PetscDraw
currentpoint_y	include/petsc-private/drawimpl.h	/^  PetscReal       currentpoint_x[20],currentpoint_y[20];$/;"	m	struct:_p_PetscDraw
currentsize	include/petscerror.h	/^        int       currentsize;$/;"	m	struct:__anon13
currentversion	bin/petscnagupgrade.py	/^def currentversion(petscdir):$/;"	f
curses	config/BuildSystem/logger.py	/^            import curses$/;"	i
curvatureCutoff	src/dm/impls/mesh/examples/tutorials/ex_coarsen.c	/^  PetscReal curvatureCutoff;      \/\/ the cutoff for the curvature$/;"	m	struct:__anon7	file:
curvatureCutoff	src/dm/impls/mesh/examples/tutorials/ex_coarsen_3.c	/^  PetscReal curvatureCutoff;      \/\/ the cutoff for the curvature$/;"	m	struct:__anon1	file:
customAtlasInd_type	include/sieve/Field.hh	/^    typedef std::pair<const int *, const int *>                     customAtlasInd_type;$/;"	t	class:ALE::GeneralSection
customAtlas_type	include/sieve/Field.hh	/^    typedef std::pair<customAtlasInd_type, bool>                    customAtlas_type;$/;"	t	class:ALE::GeneralSection
cygwinpath	config/BuildSystem/build/bk.py	/^    import cygwinpath$/;"	i
cygwinpath	config/BuildSystem/sourceControl.py	/^      import cygwinpath$/;"	i
cygwinpath_convertToFullWin32Path	config/BuildSystem/client-python/cygwinpath.c	/^cygwinpath_convertToFullWin32Path($/;"	f	file:
cygwinpath_convertToFullWin32Path	config/BuildSystem/client-python/cygwinpath.c	/^static PyObject *cygwinpath_convertToFullWin32Path(PyObject *self, PyObject *args) {$/;"	f	file:
d	bin/TOPSInstaller.py	/^			d = diropenbox(msg, title)$/;"	v
d	include/petscdmadda.h	/^  PetscInt     d;                \/* indexes the dof *\/$/;"	m	struct:_ADDAIdx_s
da	include/petscdmdatypes.h	/^  DM               da;$/;"	m	struct:__anon5
damping	include/petsc-private/linesearchimpl.h	/^  PetscReal           damping;$/;"	m	struct:_p_LineSearch
data	include/petsc-private/characteristicimpl.h	/^  void        *data;            \/* Holder for implementation class *\/$/;"	m	struct:_p_Characteristic
data	include/petsc-private/dmimpl.h	/^  void                    *data;$/;"	m	struct:_p_DM
data	include/petsc-private/drawimpl.h	/^  void            *data;$/;"	m	struct:_p_PetscDraw
data	include/petsc-private/isimpl.h	/^  void         *data;$/;"	m	struct:_p_IS
data	include/petsc-private/kspimpl.h	/^  void       *data;                      \/* holder for misc stuff associated$/;"	m	struct:_p_KSP
data	include/petsc-private/kspimpl.h	/^  void *data;$/;"	m	struct:_p_DMKSP
data	include/petsc-private/linesearchimpl.h	/^  void                *data;$/;"	m	struct:_p_LineSearch
data	include/petsc-private/matimpl.h	/^  void                   *data;            \/* implementation-specific data *\/$/;"	m	struct:_p_Mat
data	include/petsc-private/matimpl.h	/^  void        *data;$/;"	m	struct:_p_MatPartitioning
data	include/petsc-private/pcimpl.h	/^  void           *data;$/;"	m	struct:_p_PC
data	include/petsc-private/sfimpl.h	/^  void *data;                   \/* Pointer to implementation *\/$/;"	m	struct:_p_PetscSF
data	include/petsc-private/snesimpl.h	/^  void           *data;                      \/* implementation-specific data *\/$/;"	m	struct:_p_SNES
data	include/petsc-private/snesimpl.h	/^  void *data;$/;"	m	struct:_p_DMSNES
data	include/petsc-private/threadcommimpl.h	/^  void                    *data;        \/* implementation specific data *\/$/;"	m	struct:_p_PetscThreadComm
data	include/petsc-private/tsimpl.h	/^  void     *data;                   \/* implementationspecific data *\/$/;"	m	struct:_p_TS
data	include/petsc-private/tsimpl.h	/^  void *data;$/;"	m	struct:_p_DMTS
data	include/petsc-private/tsimpl.h	/^  void *data;$/;"	m	struct:_p_TSAdapt
data	include/petsc-private/vecimpl.h	/^  void                   *data;     \/* implementation-specific data *\/$/;"	m	struct:_p_Vec
data	include/petsc-private/viewerimpl.h	/^  void              *data;$/;"	m	struct:_p_PetscViewer
data	include/petscoptions.h	/^  void              *data;         \/* used to hold the default value and then any value it is changed to by GUI *\/$/;"	m	struct:_n_PetscOptions
ddhook	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*ddhook)(DM,DM,void*);$/;"	m	struct:_DMSubDomainHookLink
deallocate	include/sieve/ALE_mem.hh	/^    void          deallocate(pointer _p, size_type _n) { universal_allocator::deallocate((char*)_p, _n*sz);           };$/;"	f	class:ALE::polymorphic_allocator
deallocate	include/sieve/ALE_mem.hh	/^    void deallocate(pointer p, size_type n) {$/;"	f	class:ALE::malloc_allocator
deallocate	include/sieve/ALE_mem.hh	/^    void deallocate(pointer p, size_type) {$/;"	f	class:ALE::malloc_allocator
deallocate	include/sieve/ALE_mem.hh	/^  void logged_allocator<T, O>::deallocate(T* _p, size_type _n) {$/;"	f	class:ALE::logged_allocator
deallocate	src/dm/impls/mesh/ALE.cxx	/^  void universal_allocator::deallocate(char *p, const universal_allocator::size_type& sz) {$/;"	f	class:ALE::universal_allocator
debug	config/BuildSystem/patch.py	/^debug = logger.debug$/;"	v
debug	include/sieve/ALE_containers.hh	/^    int                debug()    const {return this->_debug;};$/;"	f	class:ALE::ParallelObject
debug	include/sieve/ALE_mem.hh	/^    int  debug() {return _debug;};$/;"	f	class:ALE::MemoryLogger
debug	include/sieve/Completion.hh	/^      int debug() const {return this->_debug;};$/;"	f	class:ALE::New::ParallelFactory
debug	include/sieve/LabelSifter.hh	/^    int         debug()    const {return this->_debug;};$/;"	f	class:ALE::LabelSifter
debug	include/sieve/Selection.hh	/^      const int              debug;$/;"	m	class:ALE::Selection::FaceInserterV
debug	include/sieve/Selection.hh	/^      const int             debug;$/;"	m	class:ALE::Selection::FaceInserter
debug	include/sieve/Selection.hh	/^      const int       debug;$/;"	m	class:ALE::Selection::FaceVisitor
debug	include/sieve/Sifter.hh	/^    int         debug()    const {return this->_debug;};$/;"	f	class:ALE::ASifter
debug	src/dm/impls/mesh/examples/tests/closure1.cxx	/^  int        debug;       \/\/ The debugging level$/;"	m	struct:__anon7	file:
debug	src/dm/impls/mesh/examples/tests/discretization1.cxx	/^  int debug; \/\/ The debugging level$/;"	m	struct:__anon3	file:
debug	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^  PetscInt   debug;$/;"	m	struct:__anon14	file:
debug	src/dm/impls/mesh/examples/tests/ex1.c	/^  PetscInt      debug;             \/* The debugging level *\/$/;"	m	struct:__anon16	file:
debug	src/dm/impls/mesh/examples/tests/ex2.c	/^  PetscInt      debug;             \/* The debugging level *\/$/;"	m	struct:__anon17	file:
debug	src/dm/impls/mesh/examples/tests/ex3.c	/^  PetscInt      debug;             \/* The debugging level *\/$/;"	m	struct:__anon15	file:
debug	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^  PetscInt   debug;$/;"	m	struct:__anon5	file:
debug	src/dm/impls/mesh/examples/tests/mesh1.cxx	/^  int        debug;           \/\/ The debugging level$/;"	m	struct:__anon4	file:
debug	src/dm/impls/mesh/examples/tests/mesh2.cxx	/^  int        debug;           \/\/ The debugging level$/;"	m	struct:__anon1	file:
debug	src/dm/impls/mesh/examples/tests/meshing.cxx	/^  int debug;$/;"	m	struct:__anon6	file:
debug	src/dm/impls/mesh/examples/tests/operator1.cxx	/^  int        debug;           \/\/ The debugging level$/;"	m	struct:__anon19	file:
debug	src/dm/impls/mesh/examples/tests/overlap1.cxx	/^  int debug; \/\/ The debugging level$/;"	m	struct:__anon9	file:
debug	src/dm/impls/mesh/examples/tests/overlap2.cxx	/^  int        debug;       \/\/ The debugging level$/;"	m	struct:__anon13	file:
debug	src/dm/impls/mesh/examples/tests/refinementTest.cxx	/^  PetscInt debug;$/;"	m	struct:__anon10	file:
debug	src/dm/impls/mesh/examples/tests/section1-old.cxx	/^  int        debug;              \/\/ The debugging level$/;"	m	struct:__anon22	file:
debug	src/dm/impls/mesh/examples/tests/section2.cxx	/^  int debug; \/\/ The debugging level$/;"	m	struct:__anon20	file:
debug	src/dm/impls/mesh/examples/tests/sieve2-old.cxx	/^  int        debug;              \/\/ The debugging level$/;"	m	struct:__anon18	file:
debug	src/dm/impls/mesh/examples/tests/sieveTests.cxx	/^  PetscInt   debug;$/;"	m	struct:__anon11	file:
debug	src/dm/impls/mesh/examples/tests/sifter1.cxx	/^  int      debug; \/\/ The debugging level$/;"	m	struct:__anon8	file:
debug	src/dm/impls/mesh/examples/tests/stl1.cxx	/^  int debug;    \/\/ The debugging level$/;"	m	struct:__anon2	file:
debug	src/dm/impls/mesh/examples/tests/topology1.cxx	/^  int        debug;              \/\/ The debugging level$/;"	m	struct:__anon21	file:
debug	src/dm/impls/mesh/examples/tutorials/ex1.c	/^  int        debug;                  \/\/ The debugging level$/;"	m	struct:__anon6	file:
debug	src/dm/impls/mesh/examples/tutorials/ex_coarsen.c	/^  int       debug;               \/\/ The debugging level$/;"	m	struct:__anon7	file:
debug	src/dm/impls/mesh/examples/tutorials/ex_coarsen.h	/^int    debug;$/;"	v
debug	src/dm/impls/mesh/examples/tutorials/ex_coarsen_2.c	/^  int       debug;               \/\/ The debugging level$/;"	m	struct:__anon8	file:
debug	src/dm/impls/mesh/examples/tutorials/ex_coarsen_3.c	/^  int       debug;               \/\/ The debugging level$/;"	m	struct:__anon1	file:
debug	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^  PetscInt      debug;                       \/\/ The debugging level$/;"	m	struct:__anon3	file:
debug	src/dm/impls/mesh/examples/tutorials/mesh_surgery.cxx	/^  int debug;$/;"	m	struct:__anon2	file:
debug	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  alestagepush_(CHAR name PETSC_MIXED_LEN(lenN), PetscInt *debug, int *ierr PETSC_END_LEN(lenN))$/;"	v
debug	src/dm/impls/plex/examples/tests/ex1.c	/^  PetscInt      debug;             \/* The debugging level *\/$/;"	m	struct:__anon4	file:
debug	src/dm/impls/plex/examples/tests/ex3.c	/^  PetscInt      debug;             \/* The debugging level *\/$/;"	m	struct:__anon3	file:
debug	src/dm/impls/plex/examples/tests/ex4.c	/^  PetscInt  debug;             \/* The debugging level *\/$/;"	m	struct:__anon6	file:
debug	src/dm/impls/plex/examples/tests/ex5.c	/^  PetscInt  debug;       \/* The debugging level *\/$/;"	m	struct:__anon5	file:
debug	src/dm/impls/plex/examples/tests/ex6.c	/^  PetscInt  debug;        \/* The debugging level *\/$/;"	m	struct:__anon2	file:
debug	src/dm/impls/plex/examples/tests/ex7.c	/^  PetscInt  debug;                        \/* The debugging level *\/$/;"	m	struct:__anon1	file:
debugmode	config/BuildSystem/patch.py	/^  debugmode = options.debugmode$/;"	v	class:PatchSet
debugmode	config/BuildSystem/patch.py	/^debugmode = False$/;"	v
decorate_with_conf	bin/pythonscripts/PetscBinaryIO.py	/^def decorate_with_conf(f):$/;"	f
decorated_f	bin/pythonscripts/PetscBinaryIO.py	/^    def decorated_f(self, *args, **kwargs):$/;"	f	function:decorate_with_conf
deepcopy	config/BuildSystem/config/setsBackport.py	/^        from copy import deepcopy$/;"	i
deepcopy	config/BuildSystem/config/setsOrdered.py	/^        from copy import deepcopy$/;"	i
defaultCheckCommand	config/BuildSystem/script.py	/^  def defaultCheckCommand(command, status, output, error):$/;"	m	class:Script
defaultCheckCommand	config/BuildSystem/script.py	/^  defaultCheckCommand = staticmethod(defaultCheckCommand)$/;"	v	class:Script
defaultConstraintDof	include/sieve/Field.hh	/^    void defaultConstraintDof() {$/;"	f	class:ALE::GeneralSection
defaultConstraintDof	include/sieve/Field.hh	/^    void defaultConstraintDof() {};$/;"	f	class:ALE::Section
defaultDB	config/BuildSystem/args.py	/^  defaultDB = None$/;"	v	class:ArgumentProcessor
defaultGlobalSection	include/petsc-private/dmimpl.h	/^  PetscSection            defaultGlobalSection; \/* Layout for global vectors *\/$/;"	m	struct:_p_DM
defaultInstallDir	config/BuildSystem/config/package.py	/^  defaultInstallDir = property(getDefaultInstallDir, setDefaultInstallDir, doc = 'The installation directory of the library')$/;"	v	class:Package
defaultLanguage	config/BuildSystem/config/package.py	/^  defaultLanguage = property(getDefaultLanguage, setDefaultLanguage, doc = 'The language in which to run tests')$/;"	v	class:Package
defaultLog	config/BuildSystem/logger.py	/^  defaultLog = None$/;"	v	class:Logger
defaultOut	config/BuildSystem/logger.py	/^  defaultOut = sys.stdout$/;"	v	class:Logger
defaultPrecision	config/BuildSystem/config/packages/BlasLapack.py	/^  defaultPrecision = property(getDefaultPrecision, setDefaultPrecision, doc = 'The precision of the library')$/;"	v	class:Configure
defaultPrecision	config/BuildSystem/config/packages/f2cblaslapack.py	/^  defaultPrecision = property(getDefaultPrecision, setDefaultPrecision, doc = 'The precision of the library')$/;"	v	class:Configure
defaultSF	include/petsc-private/dmimpl.h	/^  PetscSF                 defaultSF;            \/* SF for parallel dof overlap using default section *\/$/;"	m	struct:_p_DM
defaultSection	include/petsc-private/dmimpl.h	/^  PetscSection            defaultSection;       \/* Layout for local vectors *\/$/;"	m	struct:_p_DM
defaultSection	include/petsc-private/meshimpl.h	/^  PetscSection         defaultSection;$/;"	m	struct:__anon16
defaultValue	include/sieve/Mesh.hh	/^      int         defaultValue;$/;"	m	class:ALE::IBundle::LabelVisitor
default_arrow_type	src/dm/impls/mesh/examples/tests/xsieveTest.hh	/^      typedef ALE::XSieveDef::Arrow<double,int,char>    default_arrow_type;$/;"	t	struct:ALE::Test::XSieveTester
default_simplex	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^from FIAT.reference_element import default_simplex$/;"	i
default_simplex	bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py	/^from FIAT.reference_element import default_simplex$/;"	i
default_simplex	config/PETSc/FEM.py	/^      from FIAT.reference_element import default_simplex$/;"	i
default_simplex	config/PETSc/FEM.py	/^    from FIAT.reference_element import default_simplex$/;"	i
default_xsieve_type	src/dm/impls/mesh/examples/tests/xsieveTest.hh	/^      typedef ALE::XSieve<default_arrow_type,1>         default_xsieve_type;$/;"	t	struct:ALE::Test::XSieveTester
defaultdict	bin/pythonscripts/PetscStaticFunctionCandidates.py	/^from collections import defaultdict$/;"	i
defaultdict	config/cmakegen.py	/^    class defaultdict(dict):$/;"	c
defaultdict	config/cmakegen.py	/^    from collections import defaultdict$/;"	i
degree	include/petsc-private/sfimpl.h	/^  PetscInt        *degree;      \/* Degree of each of my root vertices *\/$/;"	m	struct:_p_PetscSF
degree	include/sieve/Sieve.hh	/^         virtual const int& degree()  const {return this->_itor->degree;};$/;"	f	class:ALE::SieveDef::RecContainerTraits::TwoValueSequence::iterator
degree	include/sieve/Sieve.hh	/^         virtual const int& degree()  const {return this->_itor->degree;};$/;"	f	class:ALE::SieveDef::RecContainerTraits::ValueSequence::iterator
degree	include/sieve/Sieve.hh	/^         virtual const int& degree() const {return this->_itor->degree;};$/;"	f	class:ALE::SieveDef::RecContainerTraits::PointSequence::iterator
degree	include/sieve/Sieve.hh	/^      int         degree;$/;"	m	struct:ALE::SieveDef::Rec
degree	include/sieve/Sifter.hh	/^         virtual const int& degree() const {return this->_itor->degree;};$/;"	f	class:ALE::SifterDef::RecContainerTraits::PointSequence::iterator
degree	include/sieve/Sifter.hh	/^      int            degree;$/;"	m	struct:ALE::SifterDef::Rec
degreeAdjuster	include/sieve/Sieve.hh	/^        degreeAdjuster(int newDegree) : _newDegree(newDegree) {};$/;"	f	struct:ALE::SieveDef::Rec::degreeAdjuster
degreeAdjuster	include/sieve/Sieve.hh	/^      struct degreeAdjuster {$/;"	s	struct:ALE::SieveDef::Rec
degreeAdjuster	include/sieve/Sifter.hh	/^        degreeAdjuster(int newDegree) : _newDegree(newDegree) {};$/;"	f	struct:ALE::SifterDef::Rec::degreeAdjuster
degreeAdjuster	include/sieve/Sifter.hh	/^      struct degreeAdjuster {$/;"	s	struct:ALE::SifterDef::Rec
degreeTag	include/sieve/Sieve.hh	/^      struct degreeTag{};$/;"	s	struct:ALE::SieveDef::RecContainerTraits
degreeknown	include/petsc-private/sfimpl.h	/^  PetscBool       degreeknown;  \/* The degree is currently known, do not have to recompute *\/$/;"	m	struct:_p_PetscSF
degreetmp	include/petsc-private/sfimpl.h	/^  PetscInt        *degreetmp;   \/* Temporary local array for computing degree *\/$/;"	m	struct:_p_PetscSF
del	include/sieve/ALE_mem.hh	/^    void del(pointer p) {$/;"	f	class:ALE::malloc_allocator
del	include/sieve/ALE_mem.hh	/^    void del(pointer p, size_type size) {$/;"	f	class:ALE::malloc_allocator
del	include/sieve/ALE_mem.hh	/^  void logged_allocator<T, O>::del(T* _p) {$/;"	f	class:ALE::logged_allocator
del	include/sieve/ALE_mem.hh	/^  void logged_allocator<T, O>::del(TT* _p, size_type _sz) {$/;"	f	class:ALE::logged_allocator
del	include/sieve/ALE_mem.hh	/^  void polymorphic_allocator<T>::del(T* _p) {$/;"	f	class:ALE::polymorphic_allocator
del	include/sieve/ALE_mem.hh	/^  void polymorphic_allocator<T>::del(TT* _p, size_type _sz) {$/;"	f	class:ALE::polymorphic_allocator
delDefine	config/BuildSystem/config/base.py	/^  def delDefine(self, name):$/;"	m	class:Configure
delMakeMacro	config/BuildSystem/config/base.py	/^  def delMakeMacro(self, name):$/;"	m	class:Configure
delfiles	config/install.py	/^  delfiles=['RDict.db','RDict.log','build.log','default.log','build.log.bkp','default.log.bkp']$/;"	v
deltatol	include/petsc-private/snesimpl.h	/^  PetscReal   deltatol;           \/* trust region convergence tolerance *\/$/;"	m	struct:_p_SNES
denyWindowManagerClose	bin/TOPSInstaller.py	/^def denyWindowManagerClose():$/;"	f
depth	include/petsclog.h	/^  int            depth;         \/* The nesting depth of the event call *\/$/;"	m	struct:__anon65
depth	include/sieve/CartesianSieve.hh	/^    virtual int depth() const {return this->_maxDepth;};$/;"	f	class:ALE::CartesianBundle
depth	include/sieve/CartesianSieve.hh	/^    virtual int depth(const point_type& point) {$/;"	f	class:ALE::CartesianBundle
depth	include/sieve/ISieve.hh	/^      const int   depth;$/;"	m	class:ALE::ISieveVisitor::MeshNConeRetriever
depth	include/sieve/Mesh.hh	/^      label_type&       depth;$/;"	m	class:ALE::IBundle::DepthVisitor
depth	include/sieve/Mesh.hh	/^      label_type& depth;$/;"	m	class:ALE::IBundle::BinaryStratifyVisitor
depth	include/sieve/Mesh.hh	/^    virtual int depth() const {return this->_maxDepth;};$/;"	f	class:ALE::Bundle
depth	include/sieve/Mesh.hh	/^    virtual int depth() const {return this->_maxDepth;};$/;"	f	class:ALE::IBundle
depth	include/sieve/Mesh.hh	/^    virtual int depth(const point_type& point) {$/;"	f	class:ALE::Bundle
depth	include/sieve/Mesh.hh	/^    virtual int depth(const point_type& point) {$/;"	f	class:ALE::IBundle
depth	include/sieve/Sieve.hh	/^         virtual const int& depth()   const {return this->_itor->depth;};$/;"	f	class:ALE::SieveDef::RecContainerTraits::ValueSequence::iterator
depth	include/sieve/Sieve.hh	/^         virtual const int& depth()  const {return this->_itor->depth;};$/;"	f	class:ALE::SieveDef::RecContainerTraits::PointSequence::iterator
depth	include/sieve/Sieve.hh	/^      int         depth;$/;"	m	struct:ALE::SieveDef::Rec
depth	include/sieve/Sieve.hh	/^    int Sieve<Point_,Marker_,Color_>::depth() {$/;"	f	class:ALE::Sieve
depth	include/sieve/Sieve.hh	/^    int Sieve<Point_,Marker_,Color_>::depth(const Obj<InputSequence>& points) {$/;"	f	class:ALE::Sieve
depth	include/sieve/Sieve.hh	/^    int Sieve<Point_,Marker_,Color_>::depth(const point_type& p) {$/;"	f	class:ALE::Sieve
depth	include/sieve/Topology.hh	/^    int depth() const {return this->_maxDepth;};$/;"	f	class:ALE::Topology
depth	include/sieve/Topology.hh	/^    int depth(const patch_type& patch) {$/;"	f	class:ALE::Topology
depth	include/sieve/Topology.hh	/^    int depth(const patch_type& patch, const point_type& point) {$/;"	f	class:ALE::Topology
depthFirstSearch	config/BuildSystem/build/buildGraph.py	/^  def depthFirstSearch(graph, returnFinished = 0, outEdges = 1):$/;"	m	class:BuildGraph
depthFirstSearch	config/BuildSystem/build/buildGraph.py	/^  depthFirstSearch = staticmethod(depthFirstSearch)$/;"	v	class:BuildGraph
depthFirstSearch	config/BuildSystem/graph.py	/^  def depthFirstSearch(graph, returnFinished = 0, outEdges = 1):$/;"	m	class:DirectedGraph
depthFirstSearch	config/BuildSystem/graph.py	/^  depthFirstSearch = staticmethod(depthFirstSearch)$/;"	v	class:DirectedGraph
depthFirstVisit	config/BuildSystem/build/buildGraph.py	/^  def depthFirstVisit(graph, vertex, seen = None, returnFinished = 0, outEdges = 1):$/;"	m	class:BuildGraph
depthFirstVisit	config/BuildSystem/build/buildGraph.py	/^  depthFirstVisit = staticmethod(depthFirstVisit)$/;"	v	class:BuildGraph
depthFirstVisit	config/BuildSystem/graph.py	/^  def depthFirstVisit(graph, vertex, seen = None, returnFinished = 0, outEdges = 1):$/;"	m	class:DirectedGraph
depthFirstVisit	config/BuildSystem/graph.py	/^  depthFirstVisit = staticmethod(depthFirstVisit)$/;"	v	class:DirectedGraph
depthMarkerTag	include/sieve/Sieve.hh	/^      struct depthMarkerTag{};$/;"	s	struct:ALE::SieveDef::RecContainerTraits
depthSequence	include/sieve/Sieve.hh	/^        typedef typename base_container_type::traits::template TwoValueSequence<typename base_container_type::traits::depthMarkerTag,int> depthSequence;$/;"	t	struct:ALE::Sieve::__anon9
depthStratum	include/sieve/CartesianSieve.hh	/^    virtual const Obj<label_sequence> depthStratum(int depth) {$/;"	f	class:ALE::CartesianBundle
depthStratum	include/sieve/Mesh.hh	/^    virtual const Obj<label_sequence>& depthStratum(int depth) {$/;"	f	class:ALE::Bundle
depthStratum	include/sieve/Mesh.hh	/^    virtual const Obj<label_sequence>& depthStratum(int depth) {$/;"	f	class:ALE::IBundle
depthStratum	include/sieve/Sieve.hh	/^      Obj<typename traits::depthSequence> depthStratum(int d) {$/;"	f	class:ALE::Sieve
depthStratum	include/sieve/Sieve.hh	/^      Obj<typename traits::depthSequence> depthStratum(int d, marker_type m) {$/;"	f	class:ALE::Sieve
depthStratum	include/sieve/Topology.hh	/^    const Obj<label_sequence>& depthStratum(const patch_type& patch, int depth) {$/;"	f	class:ALE::Topology
deque	config/cmakeboot.py	/^from collections import deque$/;"	i
deque	config/cmakegen.py	/^from collections import deque$/;"	i
descMem	include/petsclog.h	/^  PetscLogDouble descMem;      \/* The total memory allocated by descendents of these objects *\/$/;"	m	struct:__anon63
description	include/petsc-private/petscimpl.h	/^  char                 *description;$/;"	m	struct:_p_PetscObject
destroy	include/petsc-private/characteristicimpl.h	/^  PetscErrorCode (*destroy)(Characteristic);$/;"	m	struct:_CharacteristicOps
destroy	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*destroy)(DM);$/;"	m	struct:_DMOps
destroy	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*destroy)(PetscDraw);$/;"	m	struct:_PetscDrawOps
destroy	include/petsc-private/isimpl.h	/^  PetscErrorCode (*destroy)(IS);$/;"	m	struct:_ISOps
destroy	include/petsc-private/kspimpl.h	/^  PetscErrorCode (*destroy)(DMKSP*);$/;"	m	struct:_DMKSPOps
destroy	include/petsc-private/kspimpl.h	/^  PetscErrorCode (*destroy)(KSP);$/;"	m	struct:_KSPOps
destroy	include/petsc-private/linesearchimpl.h	/^  PetscErrorCode (*destroy)(SNESLineSearch);$/;"	m	struct:_LineSearchOps
destroy	include/petsc-private/matimpl.h	/^  PetscErrorCode (*destroy)(Mat);$/;"	m	struct:_MatOps
destroy	include/petsc-private/matimpl.h	/^  PetscErrorCode (*destroy)(MatCoarsen);$/;"	m	struct:_MatCoarsenOps
destroy	include/petsc-private/matimpl.h	/^  PetscErrorCode (*destroy)(MatPartitioning);$/;"	m	struct:_MatPartitioningOps
destroy	include/petsc-private/pcimpl.h	/^  PetscErrorCode (*destroy)(PC);$/;"	m	struct:_PCOps
destroy	include/petsc-private/petscimpl.h	/^   PetscErrorCode (*destroy)(PetscObject*);$/;"	m	struct:__anon11
destroy	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*destroy)(DMSNES);$/;"	m	struct:_DMSNESOps
destroy	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*destroy)(SNES);$/;"	m	struct:_SNESOps
destroy	include/petsc-private/threadcommimpl.h	/^  PetscErrorCode (*destroy)(PetscThreadComm);$/;"	m	struct:_PetscThreadCommOps
destroy	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*destroy)(DMTS);$/;"	m	struct:_DMTSOps
destroy	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*destroy)(TS);$/;"	m	struct:_TSOps
destroy	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*destroy)(TSAdapt);$/;"	m	struct:_TSAdaptOps
destroy	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*destroy)(Vec);$/;"	m	struct:_VecOps
destroy	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*destroy)(VecScatter);$/;"	m	struct:_p_VecScatter
destroy	include/petsc-private/viewerimpl.h	/^   PetscErrorCode (*destroy)(PetscViewer);$/;"	m	struct:_PetscViewerOps
destroy	include/sieve/ALE_mem.hh	/^    void          destroy(pointer _p)                  { alloc.destroy(_p);                                           };$/;"	f	class:ALE::polymorphic_allocator
destroy	include/sieve/ALE_mem.hh	/^    void destroy(pointer p) {p->~value_type();}$/;"	f	class:ALE::malloc_allocator
destroy	include/sieve/ALE_mem.hh	/^  void Obj<X,A>::destroy() {$/;"	f	class:ALE::Obj
destroy	include/sieve/ALE_mem.hh	/^  void logged_allocator<T, O>::destroy(T* _p) {$/;"	f	class:ALE::logged_allocator
destroyCSR	include/sieve/Partitioner.hh	/^    static void destroyCSR(int numPoints, int *offsets, int *adjacency) {$/;"	f	class:ALE::Partitioner
destroyCellCoordinates	include/sieve/Partitioner.hh	/^      void destroyCellCoordinates(const int numVertices, Float *X[], Float *Y[], Float *Z[]) const {$/;"	f	class:ALE::Partitioner::MeshManager
destroyIndices	include/sieve/ISieve.hh	/^    void destroyIndices() {$/;"	f	class:ALE::IFSieve
destroyIndices	include/sieve/ISieve.hh	/^    void destroyIndices(const chart_type& chart, offsets_type *coneOffsets, offsets_type *supportOffsets) {$/;"	f	class:ALE::IFSieve
destroyPoints	include/sieve/ISieve.hh	/^    void destroyPoints() {$/;"	f	class:ALE::IFSieve
destroyPoints	include/sieve/ISieve.hh	/^    void destroyPoints(const chart_type& chart, const offsets_type coneOffsets, cones_type *cones, const offsets_type supportOffsets, supports_type *supports, orientations_type *coneOrientations) {$/;"	f	class:ALE::IFSieve
destroyTmpDir	config/BuildSystem/build/framework.py	/^  def destroyTmpDir(self):$/;"	m	class:Framework
destroyvecs	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*destroyvecs)(PetscInt,Vec[]);           \/* free array of vectors *\/$/;"	m	struct:_VecOps
destructions	include/petsclog.h	/^  int            destructions; \/* The number of objects of this class destroyed *\/$/;"	m	struct:__anon63
dfill	include/petsc-private/dmdaimpl.h	/^  PetscInt              *ofill,*dfill;$/;"	m	struct:__anon23
diagonal	include/petsc-private/kspimpl.h	/^  Vec          diagonal;     \/* 1\/sqrt(diag of matrix) *\/$/;"	m	struct:_p_KSP
diagonal_fill	include/petscmat.h	/^  PetscReal     diagonal_fill;  \/* force diagonal to fill in if initially not filled *\/$/;"	m	struct:__anon96
diagonalscale	include/petsc-private/matimpl.h	/^  PetscErrorCode (*diagonalscale)(Mat,Vec,Vec);$/;"	m	struct:_MatOps
diagonalscale	include/petsc-private/pcimpl.h	/^  PetscBool      diagonalscale;$/;"	m	struct:_p_PC
diagonalscaleleft	include/petsc-private/pcimpl.h	/^  Vec            diagonalscaleright,diagonalscaleleft; \/* used for time integration scaling *\/$/;"	m	struct:_p_PC
diagonalscaleright	include/petsc-private/pcimpl.h	/^  Vec            diagonalscaleright,diagonalscaleleft; \/* used for time integration scaling *\/$/;"	m	struct:_p_PC
diagonalset	include/petsc-private/matimpl.h	/^  PetscErrorCode (*diagonalset)(Mat,Vec,InsertMode);$/;"	m	struct:_MatOps
diameter	include/sieve/Sieve.hh	/^    int Sieve<Point_,Marker_,Color_>::diameter() {$/;"	f	class:ALE::Sieve
diameter	include/sieve/Sieve.hh	/^    int Sieve<Point_,Marker_,Color_>::diameter(const point_type& p) {$/;"	f	class:ALE::Sieve
difference	config/BuildSystem/config/setsBackport.py	/^    def difference(self, other):$/;"	m	class:BaseSet
difference	config/BuildSystem/config/setsOrdered.py	/^    def difference(self, other):$/;"	m	class:BaseSet
difference_type	include/sieve/ALE_containers.hh	/^      typedef int                                    difference_type;$/;"	t	class:ALE::IndexSequence::iterator
difference_type	include/sieve/ALE_mem.hh	/^    typedef std::ptrdiff_t    difference_type;$/;"	t	class:ALE::malloc_allocator
difference_type	include/sieve/ALE_mem.hh	/^    typedef typename Alloc::difference_type difference_type;$/;"	t	class:ALE::polymorphic_allocator
difference_type	include/sieve/ALE_mem.hh	/^    typedef typename polymorphic_allocator<T>::difference_type difference_type;$/;"	t	class:ALE::logged_allocator
difference_type	include/sieve/CartesianSieve.hh	/^        typedef int                     difference_type;$/;"	t	class:ALE::CartesianSieveDef::ConeSequence::iterator
difference_type	include/sieve/CartesianSieve.hh	/^        typedef int                     difference_type;$/;"	t	class:ALE::CartesianSieveDef::PointSequence::iterator
difference_type	include/sieve/CartesianSieve.hh	/^        typedef int                     difference_type;$/;"	t	class:ALE::CartesianSieveDef::SupportSequence::iterator
difference_type	include/sieve/ISieve.hh	/^        typedef int                     difference_type;$/;"	t	class:ALE::IFSieveDef::Sequence::const_iterator
difference_type	include/sieve/LabelSifter.hh	/^        typedef int                                    difference_type;$/;"	t	class:ALE::NewSifterDef::IndexSequenceTraits::iterator_base
difference_type	include/sieve/LabelSifter.hh	/^        typedef typename iterator_base::difference_type    difference_type;$/;"	t	class:ALE::NewSifterDef::IndexSequenceTraits::iterator
difference_type	include/sieve/LabelSifter.hh	/^        typedef typename iterator_base::difference_type    difference_type;$/;"	t	class:ALE::NewSifterDef::ReversibleIndexSequenceTraits::reverse_iterator
difference_type	include/sieve/Overlap.hh	/^    typedef int         difference_type;$/;"	t	class:PETSc::DualSequence::iterator
difference_type	include/sieve/Sifter.hh	/^        typedef int                                    difference_type;$/;"	t	class:ALE::SifterDef::IndexSequenceTraits::iterator_base
difference_type	include/sieve/Sifter.hh	/^        typedef typename iterator_base::difference_type    difference_type;$/;"	t	class:ALE::SifterDef::IndexSequenceTraits::iterator
difference_type	include/sieve/Sifter.hh	/^        typedef typename iterator_base::difference_type    difference_type;$/;"	t	class:ALE::SifterDef::ReversibleIndexSequenceTraits::reverse_iterator
difference_update	config/BuildSystem/config/setsBackport.py	/^    def difference_update(self, other):$/;"	m	class:Set
difference_update	config/BuildSystem/config/setsOrdered.py	/^    def difference_update(self, other):$/;"	m	class:Set
diffstat	config/BuildSystem/patch.py	/^  def diffstat(self):$/;"	m	class:PatchSet
dim	bin/TOPSGenerator.py	/^	dim = int(buttonbox(message="Dimension of the grid?", title=title, choices = ["1", "2", "3"],fontSize = 20))$/;"	v
dim	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^  dim        = int(sys.argv[n*5+1])$/;"	v
dim	bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py	/^  dim        = int(sys.argv[n*5+1])$/;"	v
dim	include/petsc-private/dmdaimpl.h	/^  PetscInt              dim;                   \/* DMDA dimension (1,2, or 3) *\/$/;"	m	struct:__anon23
dim	include/petsc-private/dmpleximpl.h	/^  PetscInt             dim;               \/* Topological mesh dimension *\/$/;"	m	struct:__anon30
dim	include/petsc-private/matimpl.h	/^  PetscInt   dim;$/;"	m	struct:__anon2
dim	include/petsc-private/meshimpl.h	/^  PetscInt             dim; \/* Topological mesh dimension *\/$/;"	m	struct:__anon16
dim	include/petscdm.h	/^  PetscInt   dim;    \/*1 The spatial dimension of points *\/$/;"	m	struct:_DMInterpolationInfo
dim	include/petscdmdatypes.h	/^  PetscInt         dim,dof,sw;$/;"	m	struct:__anon5
dim	include/petscdmmesh.h	/^  PetscInt   dim;    \/*1 The spatial dimension of points *\/$/;"	m	struct:_DMMeshInterpolationInfo
dim	include/sieve/Generator.hh	/^        const int dim;$/;"	m	class:ALE::Triangle::Generator::SegmentVisitor
dim	include/sieve/Partitioner.hh	/^      int dim;$/;"	m	class:ALE::Partitioner::SimpleFaceRecognizer
dim	src/dm/impls/mesh/examples/tests/closure1.cxx	/^  PetscInt   dim;         \/\/ The topological mesh dimension$/;"	m	struct:__anon7	file:
dim	src/dm/impls/mesh/examples/tests/ex1.c	/^  PetscInt      dim;               \/* The topological mesh dimension *\/$/;"	m	struct:__anon16	file:
dim	src/dm/impls/mesh/examples/tests/ex2.c	/^  PetscInt      dim;               \/* The topological mesh dimension *\/$/;"	m	struct:__anon17	file:
dim	src/dm/impls/mesh/examples/tests/ex3.c	/^  PetscInt      dim;               \/* The topological mesh dimension *\/$/;"	m	struct:__anon15	file:
dim	src/dm/impls/mesh/examples/tests/mesh1.cxx	/^  int        dim;             \/\/ The topological mesh dimension$/;"	m	struct:__anon4	file:
dim	src/dm/impls/mesh/examples/tests/mesh2.cxx	/^  int        dim;             \/\/ The topological mesh dimension$/;"	m	struct:__anon1	file:
dim	src/dm/impls/mesh/examples/tests/meshing.cxx	/^  int dim;$/;"	m	struct:__anon6	file:
dim	src/dm/impls/mesh/examples/tests/operator1.cxx	/^  int        dim;             \/\/ The topological mesh dimension$/;"	m	struct:__anon19	file:
dim	src/dm/impls/mesh/examples/tests/section1-old.cxx	/^  int        dim;                \/\/ The topological mesh dimension$/;"	m	struct:__anon22	file:
dim	src/dm/impls/mesh/examples/tests/sieve2-old.cxx	/^  int        dim;                \/\/ The topological mesh dimension$/;"	m	struct:__anon18	file:
dim	src/dm/impls/mesh/examples/tests/topology1.cxx	/^  int        dim;                \/\/ The topological mesh dimension$/;"	m	struct:__anon21	file:
dim	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^int                                  dim;$/;"	m	class:ALE::Hierarchy::HierarchyBuilder
dim	src/dm/impls/mesh/examples/tutorials/ex1.c	/^  PetscInt   dim;                    \/\/ The topological mesh dimension$/;"	m	struct:__anon6	file:
dim	src/dm/impls/mesh/examples/tutorials/ex_coarsen.c	/^  int       dim;                 \/\/ The mesh dimension$/;"	m	struct:__anon7	file:
dim	src/dm/impls/mesh/examples/tutorials/ex_coarsen_3.c	/^  int       dim;                 \/\/ The mesh dimension$/;"	m	struct:__anon1	file:
dim	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^  PetscInt      dim;                         \/\/ The topological mesh dimension$/;"	m	struct:__anon3	file:
dim	src/dm/impls/mesh/examples/tutorials/mesh_surgery.cxx	/^  int dim;$/;"	m	struct:__anon2	file:
dim	src/dm/impls/moab/examples/tests/ex1.cxx	/^  PetscInt dim;$/;"	m	class:AppCtx	file:
dim	src/dm/impls/plex/examples/tests/ex1.c	/^  PetscInt  dim;                   \/* The topological mesh dimension *\/$/;"	m	struct:__anon4	file:
dim	src/dm/impls/plex/examples/tests/ex3.c	/^  PetscInt  dim;                   \/* The topological mesh dimension *\/$/;"	m	struct:__anon3	file:
dim	src/dm/impls/plex/examples/tests/ex4.c	/^  PetscInt  dim;               \/* The topological mesh dimension *\/$/;"	m	struct:__anon6	file:
dim	src/dm/impls/plex/examples/tests/ex5.c	/^  PetscInt  dim;         \/* The topological mesh dimension *\/$/;"	m	struct:__anon5	file:
dim	src/dm/impls/plex/examples/tests/ex7.c	/^  PetscInt  dim;                          \/* The topological mesh dimension *\/$/;"	m	struct:__anon1	file:
dims	include/petsc-private/matimpl.h	/^  PetscInt   dims[4];$/;"	m	struct:__anon2
dir	config/BuildSystem/config/packages/PETSc.py	/^  dir = property(getDir, doc = 'The PETSc root directory')$/;"	v	class:Configure
dir	config/PETSc/petsc.py	/^  dir = property(getDir, doc = 'The PETSc root directory')$/;"	v	class:Configure
directory	include/petscerror.h	/^  const char      *directory[PETSCSTACKSIZE];$/;"	m	struct:__anon13
diropenbox	bin/TOPSInstaller.py	/^def diropenbox(msg=None, title=None, argInitialDir=None):$/;"	f
discard	config/BuildSystem/config/setsBackport.py	/^    def discard(self, element):$/;"	m	class:Set
discard	config/BuildSystem/config/setsOrdered.py	/^    def discard(self, element):$/;"	m	class:Set
discretizations_type	include/sieve/FEMProblem.hh	/^      typedef std::map<std::string, Obj<GeneralDiscretization> > discretizations_type;$/;"	t	class:ALE::Problem::GenericFormSubProblem
discretizations_type	include/sieve/Mesh.hh	/^    typedef std::map<std::string, Obj<Discretization> > discretizations_type;$/;"	t	class:ALE::IMesh
discretizations_type	include/sieve/Mesh.hh	/^    typedef std::map<std::string, Obj<Discretization> > discretizations_type;$/;"	t	class:ALE::Mesh
display	config/BuildSystem/build/buildGraph.py	/^  def display(self):$/;"	m	class:BuildGraph
display	config/BuildSystem/graph.py	/^  def display(self):$/;"	m	class:DirectedGraph
display	include/petsc-private/drawimpl.h	/^  char            *display;$/;"	m	struct:_p_PetscDraw
displayStats	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^  bool displayStats; \/\/tell to display stats$/;"	m	struct:ALE::Coarsener::coarsen_Stats
displs	include/petsc-private/vecimpl.h	/^  PetscMPIInt            *counts,*displs;$/;"	m	struct:__anon29
displx	include/petsc-private/vecimpl.h	/^  PetscMPIInt    *displx;$/;"	m	struct:__anon28
distribute	src/dm/impls/mesh/examples/tutorials/ex1.c	/^  PetscBool  distribute;             \/\/ Distribute the mesh among processes$/;"	m	struct:__anon6	file:
distributeArrowSection	include/sieve/Distribution.hh	/^    static Obj<Section> distributeArrowSection(const Obj<Section>& serialSection, const Obj<bundle_type>& serialBundle, const Obj<bundle_type>& parallelBundle, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap) {$/;"	f	class:ALE::Distribution
distributeLabel	include/sieve/Distribution.hh	/^    static void distributeLabel(const Obj<typename Mesh::sieve_type>& sieve, const Obj<Label>& l, const Obj<Partition>& partition, Renumbering& renumbering, const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<NewLabel>& newL) {$/;"	f	class:ALE::DistributionNew
distributeLabelV	include/sieve/Distribution.hh	/^    static void distributeLabelV(const Obj<typename Mesh::sieve_type>& sieve, const Obj<Label>& l, const Obj<Partition>& partition, Renumbering& renumbering, const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<NewLabel>& newL) {$/;"	f	class:ALE::DistributionNew
distributeMesh	include/sieve/Distribution.hh	/^    static Obj<ALE::Mesh<PetscInt,PetscScalar> > distributeMesh(const Obj<ALE::Mesh<PetscInt,PetscScalar> >& serialMesh, const int height = 0, const std::string& partitioner = "chaco") {$/;"	f	class:ALE::Distribution
distributeMesh	include/sieve/Distribution.hh	/^    static Obj<partition_type> distributeMesh(const Obj<Mesh>& mesh, const Obj<NewMesh>& newMesh, Renumbering& renumbering, const Obj<SendOverlap>& sendMeshOverlap, const Obj<RecvOverlap>& recvMeshOverlap, const int height = 0) {$/;"	f	class:ALE::DistributionNew
distributeMeshAndSections	include/sieve/Distribution.hh	/^    static Obj<partition_type> distributeMeshAndSections(const Obj<Mesh>& mesh, const Obj<NewMesh>& newMesh, Renumbering& renumbering, const Obj<SendOverlap>& sendMeshOverlap, const Obj<RecvOverlap>& recvMeshOverlap, const int height = 0) {$/;"	f	class:ALE::DistributionNew
distributeMeshAndSectionsV	include/sieve/Distribution.hh	/^    static void distributeMeshAndSectionsV(const Obj<Mesh>& mesh, const Obj<NewMesh>& newMesh) {$/;"	f	class:ALE::DistributionNew
distributeMeshV	include/sieve/Distribution.hh	/^    static Obj<partition_type> distributeMeshV(const Obj<Mesh>& mesh, const Obj<NewMesh>& newMesh, Renumbering& renumbering, const Obj<SendOverlap>& sendMeshOverlap, const Obj<RecvOverlap>& recvMeshOverlap, const int height = 0) {$/;"	f	class:ALE::DistributionNew
distributeSection	include/sieve/Distribution.hh	/^    static Obj<Section> distributeSection(const Obj<Section>& serialSection, const Obj<bundle_type>& parallelBundle, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap) {$/;"	f	class:ALE::Distribution
distributeSection	include/sieve/Distribution.hh	/^    static void distributeSection(const Obj<Section>& s, const Obj<Partition>& partition, Renumbering& renumbering, const Obj<SendOverlap>& sendOverlap, const Obj<RecvOverlap>& recvOverlap, const Obj<NewSection>& newS) {$/;"	f	class:ALE::DistributionNew
distribution	src/dm/impls/mesh/examples/tests/unitTests.cxx	/^  PetscBool  distribution;  \/\/ Run the Distribution tests$/;"	m	struct:__anon23	file:
distutils	config/BuildSystem/RDict.py	/^    import distutils.sysconfig$/;"	i
distutils	config/BuildSystem/build/templates/usingPython.py	/^        import distutils.sysconfig$/;"	i
distutils	config/BuildSystem/build/templates/usingPython.py	/^    import distutils.sysconfig$/;"	i
distutils	config/BuildSystem/config/python.py	/^        import distutils.sysconfig$/;"	i
distutils	config/BuildSystem/config/python.py	/^    import distutils.sysconfig$/;"	i
divtol	include/petsc-private/kspimpl.h	/^                  divtol;                   \/* divergence tolerance *\/$/;"	m	struct:_p_KSP
dm	include/petsc-private/kspimpl.h	/^  DM              dm;$/;"	m	struct:_p_KSP
dm	include/petsc-private/pcimpl.h	/^  DM             dm;$/;"	m	struct:_p_PC
dm	include/petsc-private/snesimpl.h	/^  DM        dm;$/;"	m	struct:_p_SNES
dm	include/petsc-private/tsimpl.h	/^  DM            dm;$/;"	m	struct:_p_TS
dm	include/petscdmplex.h	/^  DM    dm;$/;"	m	struct:__anon36
dm	src/dm/impls/mesh/examples/tests/ex1.c	/^  DM            dm;                \/* REQUIRED in order to use SNES evaluation functions *\/$/;"	m	struct:__anon16	file:
dm	src/dm/impls/mesh/examples/tests/ex2.c	/^  DM            dm;                \/* REQUIRED in order to use SNES evaluation functions *\/$/;"	m	struct:__anon17	file:
dm	src/dm/impls/mesh/examples/tests/ex3.c	/^  DM            dm;                \/* REQUIRED in order to use SNES evaluation functions *\/$/;"	m	struct:__anon15	file:
dm	src/dm/impls/moab/examples/tests/ex1.cxx	/^  DM            dm;                \/* REQUIRED in order to use SNES evaluation functions *\/$/;"	m	class:AppCtx	file:
dm	src/dm/impls/plex/examples/tests/ex1.c	/^  DM            dm;                \/* REQUIRED in order to use SNES evaluation functions *\/$/;"	m	struct:__anon4	file:
dm	src/dm/impls/plex/examples/tests/ex3.c	/^  DM            dm;                \/* REQUIRED in order to use SNES evaluation functions *\/$/;"	m	struct:__anon3	file:
dm	src/dm/impls/plex/examples/tests/ex4.c	/^  DM        dm;$/;"	m	struct:__anon6	file:
dm	src/dm/impls/plex/examples/tests/ex5.c	/^  DM        dm;$/;"	m	struct:__anon5	file:
dm	src/dm/impls/plex/examples/tests/ex7.c	/^  DM        dm;$/;"	m	struct:__anon1	file:
dmActive	include/petsc-private/kspimpl.h	/^  PetscBool       dmActive;     \/* KSP should use DM for computing operators *\/$/;"	m	struct:_p_KSP
dmAuto	include/petsc-private/kspimpl.h	/^  PetscBool       dmAuto;       \/* DM was created automatically by KSP *\/$/;"	m	struct:_p_KSP
dmAuto	include/petsc-private/snesimpl.h	/^  PetscBool dmAuto;             \/* SNES created currently used DM automatically *\/$/;"	m	struct:_p_SNES
dmBody	src/dm/impls/mesh/examples/tests/ex11f90.F90	/^   Type(DM)                               :: dmBody,/;"	v	program:test2f90
dmBody	src/dm/impls/mesh/examples/tests/ex5f90.F90	/^   Type(DM)                               :: dmBody,/;"	v	program:test1f90
dmBody	src/dm/impls/mesh/examples/tests/ex7f90.F90	/^   Type(DM)                               :: dmBody,/;"	v	program:test2f90
dmBody	src/dm/impls/mesh/examples/tests/ex9f90.F90	/^   Type(DM)                               :: dmBody,/;"	v	program:test2f90
dmCoarse	include/petsc-private/dmpatchimpl.h	/^  DM         dmCoarse;$/;"	m	struct:__anon10
dmFS	src/dm/impls/mesh/examples/tests/ex11f90.F90	/^   Type(DM)                               :: dmBody,dmFS$/;"	v	program:test2f90
dmFS	src/dm/impls/mesh/examples/tests/ex5f90.F90	/^   Type(DM)                               :: dmBody,dmFS$/;"	v	program:test1f90
dmFS	src/dm/impls/mesh/examples/tests/ex7f90.F90	/^   Type(DM)                               :: dmBody,dmFS$/;"	v	program:test2f90
dmFS	src/dm/impls/mesh/examples/tests/ex9f90.F90	/^   Type(DM)                               :: dmBody,dmFS$/;"	v	program:test2f90
dmksp	include/petsc-private/dmimpl.h	/^  PetscObject             dmksp,dmsnes,dmts;$/;"	m	struct:_p_DM
dmmeshcreateexodus_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  dmmeshcreateexodus_(MPI_Fint * comm, CHAR filename PETSC_MIXED_LEN(len), DM *dm, PetscErrorCode *ierr PETSC_END_LEN(len))$/;"	f
dmmeshcreateexodus_	src/dm/impls/mesh/ftn-custom/zmesh.c	31;"	d	file:
dmmeshcreateexodus_	src/dm/impls/mesh/ftn-custom/zmesh.c	6;"	d	file:
dmmeshcreatematrix_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  dmmeshcreatematrix_(DM *mesh, SectionReal *section, CHAR mattype PETSC_MIXED_LEN(lenN), Mat *J, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmmeshcreatematrix_	src/dm/impls/mesh/ftn-custom/zmesh.c	25;"	d	file:
dmmeshcreatematrix_	src/dm/impls/mesh/ftn-custom/zmesh.c	50;"	d	file:
dmmeshcreatepcice_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  dmmeshcreatepcice_(MPI_Fint * comm, int *dim, CHAR coordFilename PETSC_MIXED_LEN(lenC), CHAR adjFilename PETSC_MIXED_LEN(lenA), PetscBool  *interpolate, CHAR bcFilename PETSC_MIXED_LEN(lenB), DM *dm, PetscErrorCode *ierr PETSC_END_LEN(lenC) PETSC_END_LEN(lenA) PETSC_END_LEN(lenB))$/;"	f
dmmeshcreatepcice_	src/dm/impls/mesh/ftn-custom/zmesh.c	30;"	d	file:
dmmeshcreatepcice_	src/dm/impls/mesh/ftn-custom/zmesh.c	5;"	d	file:
dmmeshcreatesection_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  dmmeshcreatesection_(DM *mesh, PetscInt *dim, PetscInt *numFields, PetscInt numComp[], PetscInt numDof[], PetscInt *numBC, PetscInt bcField[], IS bcPoints[], PetscSection *section, int *ierr)$/;"	f
dmmeshcreatesection_	src/dm/impls/mesh/ftn-custom/zmesh.c	23;"	d	file:
dmmeshcreatesection_	src/dm/impls/mesh/ftn-custom/zmesh.c	48;"	d	file:
dmmeshcreatesectionrealis_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  dmmeshcreatesectionrealis_(DM *dm, IS *is, CHAR name PETSC_MIXED_LEN(lenN), PetscInt *fiberDim, SectionReal *section, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmmeshcreatesectionrealis_	src/dm/impls/mesh/ftn-custom/zmesh.c	12;"	d	file:
dmmeshcreatesectionrealis_	src/dm/impls/mesh/ftn-custom/zmesh.c	37;"	d	file:
dmmeshdistribute_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  dmmeshdistribute_(DM *serialMesh, CHAR partitioner PETSC_MIXED_LEN(lenP), DM *parallelMesh, PetscErrorCode *ierr PETSC_END_LEN(lenP))$/;"	f
dmmeshdistribute_	src/dm/impls/mesh/ftn-custom/zmesh.c	32;"	d	file:
dmmeshdistribute_	src/dm/impls/mesh/ftn-custom/zmesh.c	7;"	d	file:
dmmeshgetcellsectionint_	src/dm/impls/mesh/ftn-custom/zmesh.c	11;"	d	file:
dmmeshgetcellsectionint_	src/dm/impls/mesh/ftn-custom/zmesh.c	36;"	d	file:
dmmeshgetcellsectionreal_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  dmmeshgetcellsectionreal_(DM *mesh, CHAR name PETSC_MIXED_LEN(lenN), PetscInt *fiberDim, SectionReal *section, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmmeshgetcellsectionreal_	src/dm/impls/mesh/ftn-custom/zmesh.c	34;"	d	file:
dmmeshgetcellsectionreal_	src/dm/impls/mesh/ftn-custom/zmesh.c	9;"	d	file:
dmmeshgetconef90_	src/dm/impls/mesh/f90-custom/zmeshf90.c	/^void PETSC_STDCALL dmmeshgetconef90_(DM *dm,PetscInt *p,F90Array1d *ptr,int *__ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
dmmeshgetconef90_	src/dm/impls/mesh/f90-custom/zmeshf90.c	10;"	d	file:
dmmeshgetconef90_	src/dm/impls/mesh/f90-custom/zmeshf90.c	17;"	d	file:
dmmeshgetcoordinatesf90_	src/dm/impls/mesh/f90-custom/zmeshf90.c	/^void PETSC_STDCALL dmmeshgetcoordinatesf90_(DM *dm,F90Array2d *ptr,int *__ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
dmmeshgetcoordinatesf90_	src/dm/impls/mesh/f90-custom/zmeshf90.c	13;"	d	file:
dmmeshgetcoordinatesf90_	src/dm/impls/mesh/f90-custom/zmeshf90.c	6;"	d	file:
dmmeshgetelementsf90_	src/dm/impls/mesh/f90-custom/zmeshf90.c	/^void PETSC_STDCALL dmmeshgetelementsf90_(DM *dm,F90Array2d *ptr,int *__ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
dmmeshgetelementsf90_	src/dm/impls/mesh/f90-custom/zmeshf90.c	15;"	d	file:
dmmeshgetelementsf90_	src/dm/impls/mesh/f90-custom/zmeshf90.c	8;"	d	file:
dmmeshgetlabelidis_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL dmmeshgetlabelidis_(DM *dm, CHAR name PETSC_MIXED_LEN(lenN), IS *ids, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmmeshgetlabelidis_	src/dm/impls/mesh/ftn-custom/zmesh.c	17;"	d	file:
dmmeshgetlabelidis_	src/dm/impls/mesh/ftn-custom/zmesh.c	42;"	d	file:
dmmeshgetlabelsize_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  dmmeshgetlabelsize_(DM *mesh, CHAR name PETSC_MIXED_LEN(lenN), PetscInt *size, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmmeshgetlabelsize_	src/dm/impls/mesh/ftn-custom/zmesh.c	16;"	d	file:
dmmeshgetlabelsize_	src/dm/impls/mesh/ftn-custom/zmesh.c	41;"	d	file:
dmmeshgetsectionint_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  dmmeshgetsectionint_(DM *mesh, CHAR name PETSC_MIXED_LEN(lenN), SectionInt *section, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmmeshgetsectionint_	src/dm/impls/mesh/ftn-custom/zmesh.c	21;"	d	file:
dmmeshgetsectionint_	src/dm/impls/mesh/ftn-custom/zmesh.c	46;"	d	file:
dmmeshgetsectionreal_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  dmmeshgetsectionreal_(DM *mesh, CHAR name PETSC_MIXED_LEN(lenN), SectionReal *section, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmmeshgetsectionreal_	src/dm/impls/mesh/ftn-custom/zmesh.c	20;"	d	file:
dmmeshgetsectionreal_	src/dm/impls/mesh/ftn-custom/zmesh.c	45;"	d	file:
dmmeshgetstratumis_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  dmmeshgetstratumis_(DM *mesh, CHAR name PETSC_MIXED_LEN(lenN), PetscInt *value, IS *is, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmmeshgetstratumis_	src/dm/impls/mesh/ftn-custom/zmesh.c	19;"	d	file:
dmmeshgetstratumis_	src/dm/impls/mesh/ftn-custom/zmesh.c	44;"	d	file:
dmmeshgetstratumsize_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  dmmeshgetstratumsize_(DM *mesh, CHAR name PETSC_MIXED_LEN(lenN), PetscInt *value, PetscInt *size, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmmeshgetstratumsize_	src/dm/impls/mesh/ftn-custom/zmesh.c	18;"	d	file:
dmmeshgetstratumsize_	src/dm/impls/mesh/ftn-custom/zmesh.c	43;"	d	file:
dmmeshgetvertexsectionint_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  dmmeshgetvertexsectionint_(DM *mesh, CHAR name PETSC_MIXED_LEN(lenN), PetscInt *fiberDim, SectionInt *section, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmmeshgetvertexsectionint_	src/dm/impls/mesh/ftn-custom/zmesh.c	10;"	d	file:
dmmeshgetvertexsectionint_	src/dm/impls/mesh/ftn-custom/zmesh.c	35;"	d	file:
dmmeshgetvertexsectionreal_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  dmmeshgetvertexsectionreal_(DM *mesh, CHAR name PETSC_MIXED_LEN(lenN), PetscInt *fiberDim, SectionReal *section, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmmeshgetvertexsectionreal_	src/dm/impls/mesh/ftn-custom/zmesh.c	33;"	d	file:
dmmeshgetvertexsectionreal_	src/dm/impls/mesh/ftn-custom/zmesh.c	8;"	d	file:
dmmeshrestoreconef90_	src/dm/impls/mesh/f90-custom/zmeshf90.c	/^void PETSC_STDCALL dmmeshrestoreconef90_(DM *dm,PetscInt *p,F90Array1d *ptr,int *__ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
dmmeshrestoreconef90_	src/dm/impls/mesh/f90-custom/zmeshf90.c	11;"	d	file:
dmmeshrestoreconef90_	src/dm/impls/mesh/f90-custom/zmeshf90.c	18;"	d	file:
dmmeshrestorecoordinatesf90_	src/dm/impls/mesh/f90-custom/zmeshf90.c	/^void PETSC_STDCALL dmmeshrestorecoordinatesf90_(DM *x,F90Array2d *ptr,int *__ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
dmmeshrestorecoordinatesf90_	src/dm/impls/mesh/f90-custom/zmeshf90.c	14;"	d	file:
dmmeshrestorecoordinatesf90_	src/dm/impls/mesh/f90-custom/zmeshf90.c	7;"	d	file:
dmmeshrestoreelementsf90_	src/dm/impls/mesh/f90-custom/zmeshf90.c	/^void PETSC_STDCALL dmmeshrestoreelementsf90_(DM *x,F90Array2d *ptr,int *__ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
dmmeshrestoreelementsf90_	src/dm/impls/mesh/f90-custom/zmeshf90.c	16;"	d	file:
dmmeshrestoreelementsf90_	src/dm/impls/mesh/f90-custom/zmeshf90.c	9;"	d	file:
dmmeshsetsection_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  dmmeshsetsection_(DM *mesh, CHAR name PETSC_MIXED_LEN(lenN), PetscSection *section, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmmeshsetsection_	src/dm/impls/mesh/ftn-custom/zmesh.c	24;"	d	file:
dmmeshsetsection_	src/dm/impls/mesh/ftn-custom/zmesh.c	49;"	d	file:
dmmeshsetsectionreal_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  dmmeshsetsectionreal_(DM *mesh, CHAR name PETSC_MIXED_LEN(lenN), SectionReal *section, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmmeshsetsectionreal_	src/dm/impls/mesh/ftn-custom/zmesh.c	22;"	d	file:
dmmeshsetsectionreal_	src/dm/impls/mesh/ftn-custom/zmesh.c	47;"	d	file:
dmplexcomputecellgeometry_	src/dm/impls/plex/f90-custom/zplexf90.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexcomputecellgeometry_(DM *dm, PetscInt *cell, F90Array1d *ptrV, F90Array1d *ptrJ, F90Array1d *ptrIJ, PetscReal *detJ, int *__ierr PETSC_F90_2PTR_PROTO(ptrVd) PETSC_F90_2PTR_PROTO(ptrJd) PETSC_F90_2PTR_PROTO(ptrIJd))$/;"	f
dmplexcomputecellgeometry_	src/dm/impls/plex/f90-custom/zplexf90.c	25;"	d	file:
dmplexcomputecellgeometry_	src/dm/impls/plex/f90-custom/zplexf90.c	46;"	d	file:
dmplexcreatefromcelllist_	src/dm/impls/plex/ftn-custom/zplex.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexcreatefromcelllist_(MPI_Comm *comm, PetscInt *dim, PetscInt *numCells, PetscInt *numVertices, PetscInt *numCorners, PetscBool *interpolate, const int cells[], PetscInt *spaceDim, const double vertexCoords[], DM *dm, int *ierr)$/;"	f
dmplexcreatefromcelllist_	src/dm/impls/plex/ftn-custom/zplex.c	13;"	d	file:
dmplexcreatefromcelllist_	src/dm/impls/plex/ftn-custom/zplex.c	23;"	d	file:
dmplexcreatesection_	src/dm/impls/plex/f90-custom/zplexf90.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexcreatesection_(DM *dm, PetscInt *dim, PetscInt *numFields, F90Array1d *ptrC, F90Array1d *ptrD, PetscInt *numBC, F90Array1d *ptrF, F90Array1d *ptrP, PetscSection *section, int *__ierr PETSC_F90_2PTR_PROTO(ptrCd) PETSC_F90_2PTR_PROTO(ptrDd) PETSC_F90_2PTR_PROTO(ptrFd) PETSC_F90_2PTR_PROTO(ptrPd))$/;"	f
dmplexcreatesection_	src/dm/impls/plex/f90-custom/zplexf90.c	24;"	d	file:
dmplexcreatesection_	src/dm/impls/plex/f90-custom/zplexf90.c	45;"	d	file:
dmplexcreatesubmesh_	src/dm/impls/plex/ftn-custom/zplexsubmesh.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexcreatesubmesh_(DM *dm, CHAR name PETSC_MIXED_LEN(lenN), PetscInt *value, DM *subdm, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmplexcreatesubmesh_	src/dm/impls/plex/ftn-custom/zplexsubmesh.c	5;"	d	file:
dmplexcreatesubmesh_	src/dm/impls/plex/ftn-custom/zplexsubmesh.c	7;"	d	file:
dmplexdistribute_	src/dm/impls/plex/ftn-custom/zplex.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexdistribute_(DM *dm, CHAR name PETSC_MIXED_LEN(lenN), PetscInt *overlap, DM *dmParallel, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmplexdistribute_	src/dm/impls/plex/ftn-custom/zplex.c	15;"	d	file:
dmplexdistribute_	src/dm/impls/plex/ftn-custom/zplex.c	5;"	d	file:
dmplexgetcone_	src/dm/impls/plex/f90-custom/zplexf90.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexgetcone_(DM *dm, PetscInt *p, F90Array1d *ptr, int *__ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
dmplexgetcone_	src/dm/impls/plex/f90-custom/zplexf90.c	27;"	d	file:
dmplexgetcone_	src/dm/impls/plex/f90-custom/zplexf90.c	6;"	d	file:
dmplexgetconeorientation_	src/dm/impls/plex/f90-custom/zplexf90.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexgetconeorientation_(DM *dm, PetscInt *p, F90Array1d *ptr, int *__ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
dmplexgetconeorientation_	src/dm/impls/plex/f90-custom/zplexf90.c	29;"	d	file:
dmplexgetconeorientation_	src/dm/impls/plex/f90-custom/zplexf90.c	8;"	d	file:
dmplexgetfulljoin_	src/dm/impls/plex/f90-custom/zplexf90.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexgetfulljoin_(DM *dm, PetscInt *numPoints, F90Array1d *pptr, F90Array1d *cptr, int *__ierr PETSC_F90_2PTR_PROTO(pptrd) PETSC_F90_2PTR_PROTO(cptrd))$/;"	f
dmplexgetfulljoin_	src/dm/impls/plex/f90-custom/zplexf90.c	19;"	d	file:
dmplexgetfulljoin_	src/dm/impls/plex/f90-custom/zplexf90.c	40;"	d	file:
dmplexgetfullmeet_	src/dm/impls/plex/f90-custom/zplexf90.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexgetfullmeet_(DM *dm, PetscInt *numPoints, F90Array1d *pptr, F90Array1d *cptr, int *__ierr PETSC_F90_2PTR_PROTO(pptrd) PETSC_F90_2PTR_PROTO(cptrd))$/;"	f
dmplexgetfullmeet_	src/dm/impls/plex/f90-custom/zplexf90.c	22;"	d	file:
dmplexgetfullmeet_	src/dm/impls/plex/f90-custom/zplexf90.c	43;"	d	file:
dmplexgetjoin_	src/dm/impls/plex/f90-custom/zplexf90.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexgetjoin_(DM *dm, PetscInt *numPoints, F90Array1d *pptr, F90Array1d *cptr, int *__ierr PETSC_F90_2PTR_PROTO(pptrd) PETSC_F90_2PTR_PROTO(cptrd))$/;"	f
dmplexgetjoin_	src/dm/impls/plex/f90-custom/zplexf90.c	18;"	d	file:
dmplexgetjoin_	src/dm/impls/plex/f90-custom/zplexf90.c	39;"	d	file:
dmplexgetlabelidis_	src/dm/impls/plex/ftn-custom/zplex.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexgetlabelidis_(DM *dm, CHAR name PETSC_MIXED_LEN(lenN), IS *ids, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmplexgetlabelidis_	src/dm/impls/plex/ftn-custom/zplex.c	10;"	d	file:
dmplexgetlabelidis_	src/dm/impls/plex/ftn-custom/zplex.c	20;"	d	file:
dmplexgetlabelsize_	src/dm/impls/plex/ftn-custom/zplex.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexgetlabelsize_(DM *dm, CHAR name PETSC_MIXED_LEN(lenN), PetscInt *size, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmplexgetlabelsize_	src/dm/impls/plex/ftn-custom/zplex.c	19;"	d	file:
dmplexgetlabelsize_	src/dm/impls/plex/ftn-custom/zplex.c	9;"	d	file:
dmplexgetlabelvalue_	src/dm/impls/plex/ftn-custom/zplex.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexgetlabelvalue_(DM *dm, CHAR name PETSC_MIXED_LEN(lenN), PetscInt *point, PetscInt *value, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmplexgetlabelvalue_	src/dm/impls/plex/ftn-custom/zplex.c	17;"	d	file:
dmplexgetlabelvalue_	src/dm/impls/plex/ftn-custom/zplex.c	7;"	d	file:
dmplexgetmeet_	src/dm/impls/plex/f90-custom/zplexf90.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexgetmeet_(DM *dm, PetscInt *numPoints, F90Array1d *pptr, F90Array1d *cptr, int *__ierr PETSC_F90_2PTR_PROTO(pptrd) PETSC_F90_2PTR_PROTO(cptrd))$/;"	f
dmplexgetmeet_	src/dm/impls/plex/f90-custom/zplexf90.c	21;"	d	file:
dmplexgetmeet_	src/dm/impls/plex/f90-custom/zplexf90.c	42;"	d	file:
dmplexgetstratumis_	src/dm/impls/plex/ftn-custom/zplex.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexgetstratumis_(DM *dm, CHAR name PETSC_MIXED_LEN(lenN), PetscInt *value, IS *is, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmplexgetstratumis_	src/dm/impls/plex/ftn-custom/zplex.c	12;"	d	file:
dmplexgetstratumis_	src/dm/impls/plex/ftn-custom/zplex.c	22;"	d	file:
dmplexgetstratumsize_	src/dm/impls/plex/ftn-custom/zplex.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexgetstratumsize_(DM *dm, CHAR name PETSC_MIXED_LEN(lenN), PetscInt *value, PetscInt *size, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmplexgetstratumsize_	src/dm/impls/plex/ftn-custom/zplex.c	11;"	d	file:
dmplexgetstratumsize_	src/dm/impls/plex/ftn-custom/zplex.c	21;"	d	file:
dmplexgetsupport_	src/dm/impls/plex/f90-custom/zplexf90.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexgetsupport_(DM *dm, PetscInt *p, F90Array1d *ptr, int *__ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
dmplexgetsupport_	src/dm/impls/plex/f90-custom/zplexf90.c	10;"	d	file:
dmplexgetsupport_	src/dm/impls/plex/f90-custom/zplexf90.c	31;"	d	file:
dmplexgettransitiveclosure_	src/dm/impls/plex/f90-custom/zplexf90.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexgettransitiveclosure_(DM *dm, PetscInt *p, PetscBool *useCone, F90Array1d *ptr, int *__ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
dmplexgettransitiveclosure_	src/dm/impls/plex/f90-custom/zplexf90.c	12;"	d	file:
dmplexgettransitiveclosure_	src/dm/impls/plex/f90-custom/zplexf90.c	33;"	d	file:
dmplexhaslabel_	src/dm/impls/plex/ftn-custom/zplex.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexhaslabel_(DM *dm, CHAR name PETSC_MIXED_LEN(lenN), PetscBool *hasLabel, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmplexhaslabel_	src/dm/impls/plex/ftn-custom/zplex.c	16;"	d	file:
dmplexhaslabel_	src/dm/impls/plex/ftn-custom/zplex.c	6;"	d	file:
dmplexmatsetclosure_	src/dm/impls/plex/f90-custom/zplexf90.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexmatsetclosure_(DM *dm, PetscSection *section, PetscSection *globalSection, Mat *A, PetscInt *point, F90Array1d *ptr, InsertMode *mode, int *__ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
dmplexmatsetclosure_	src/dm/impls/plex/f90-custom/zplexf90.c	17;"	d	file:
dmplexmatsetclosure_	src/dm/impls/plex/f90-custom/zplexf90.c	38;"	d	file:
dmplexrestorecone_	src/dm/impls/plex/f90-custom/zplexf90.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexrestorecone_(DM *dm, PetscInt *p, F90Array1d *ptr, int *__ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
dmplexrestorecone_	src/dm/impls/plex/f90-custom/zplexf90.c	28;"	d	file:
dmplexrestorecone_	src/dm/impls/plex/f90-custom/zplexf90.c	7;"	d	file:
dmplexrestoreconeorientation_	src/dm/impls/plex/f90-custom/zplexf90.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexrestoreconeorientation_(DM *dm, PetscInt *p, F90Array1d *ptr, int *__ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
dmplexrestoreconeorientation_	src/dm/impls/plex/f90-custom/zplexf90.c	30;"	d	file:
dmplexrestoreconeorientation_	src/dm/impls/plex/f90-custom/zplexf90.c	9;"	d	file:
dmplexrestorejoin_	src/dm/impls/plex/f90-custom/zplexf90.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexrestorejoin_(DM *dm, PetscInt *numPoints, F90Array1d *pptr, F90Array1d *cptr, int *__ierr PETSC_F90_2PTR_PROTO(pptrd) PETSC_F90_2PTR_PROTO(cptrd))$/;"	f
dmplexrestorejoin_	src/dm/impls/plex/f90-custom/zplexf90.c	20;"	d	file:
dmplexrestorejoin_	src/dm/impls/plex/f90-custom/zplexf90.c	41;"	d	file:
dmplexrestoremeet_	src/dm/impls/plex/f90-custom/zplexf90.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexrestoremeet_(DM *dm, PetscInt *numPoints, F90Array1d *pptr, F90Array1d *cptr, int *__ierr PETSC_F90_2PTR_PROTO(pptrd) PETSC_F90_2PTR_PROTO(cptrd))$/;"	f
dmplexrestoremeet_	src/dm/impls/plex/f90-custom/zplexf90.c	23;"	d	file:
dmplexrestoremeet_	src/dm/impls/plex/f90-custom/zplexf90.c	44;"	d	file:
dmplexrestoresupport_	src/dm/impls/plex/f90-custom/zplexf90.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexrestoresupport_(DM *dm, PetscInt *p, F90Array1d *ptr, int *__ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
dmplexrestoresupport_	src/dm/impls/plex/f90-custom/zplexf90.c	11;"	d	file:
dmplexrestoresupport_	src/dm/impls/plex/f90-custom/zplexf90.c	32;"	d	file:
dmplexrestoretransitiveclosure_	src/dm/impls/plex/f90-custom/zplexf90.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexrestoretransitiveclosure_(DM *dm, PetscInt *p, PetscBool *useCone, F90Array1d *ptr, int *__ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
dmplexrestoretransitiveclosure_	src/dm/impls/plex/f90-custom/zplexf90.c	13;"	d	file:
dmplexrestoretransitiveclosure_	src/dm/impls/plex/f90-custom/zplexf90.c	34;"	d	file:
dmplexsetlabelvalue_	src/dm/impls/plex/ftn-custom/zplex.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexsetlabelvalue_(DM *dm, CHAR name PETSC_MIXED_LEN(lenN), PetscInt *point, PetscInt *value, int *ierr PETSC_END_LEN(lenN))$/;"	f
dmplexsetlabelvalue_	src/dm/impls/plex/ftn-custom/zplex.c	18;"	d	file:
dmplexsetlabelvalue_	src/dm/impls/plex/ftn-custom/zplex.c	8;"	d	file:
dmplexvecgetclosure_	src/dm/impls/plex/f90-custom/zplexf90.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexvecgetclosure_(DM *dm, PetscSection *section, Vec *x, PetscInt *point, F90Array1d *ptr, int *__ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
dmplexvecgetclosure_	src/dm/impls/plex/f90-custom/zplexf90.c	14;"	d	file:
dmplexvecgetclosure_	src/dm/impls/plex/f90-custom/zplexf90.c	35;"	d	file:
dmplexvecrestoreclosure_	src/dm/impls/plex/f90-custom/zplexf90.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexvecrestoreclosure_(DM *dm, PetscSection *section, Vec *v, PetscInt *point, F90Array1d *ptr, int *__ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
dmplexvecrestoreclosure_	src/dm/impls/plex/f90-custom/zplexf90.c	15;"	d	file:
dmplexvecrestoreclosure_	src/dm/impls/plex/f90-custom/zplexf90.c	36;"	d	file:
dmplexvecsetclosure_	src/dm/impls/plex/f90-custom/zplexf90.c	/^PETSC_EXTERN void PETSC_STDCALL dmplexvecsetclosure_(DM *dm, PetscSection *section, Vec *v, PetscInt *point, F90Array1d *ptr, InsertMode *mode, int *__ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
dmplexvecsetclosure_	src/dm/impls/plex/f90-custom/zplexf90.c	16;"	d	file:
dmplexvecsetclosure_	src/dm/impls/plex/f90-custom/zplexf90.c	37;"	d	file:
dmsnes	include/petsc-private/dmimpl.h	/^  PetscObject             dmksp,dmsnes,dmts;$/;"	m	struct:_p_DM
dmts	include/petsc-private/dmimpl.h	/^  PetscObject             dmksp,dmsnes,dmts;$/;"	m	struct:_p_DM
doCleanup	config/BuildSystem/config/framework.py	/^  doCleanup = property(getCleanup, setCleanup, doc = 'Flag for deleting generated files')$/;"	v	class:Framework
doOdd	src/dm/impls/mesh/examples/tutorials/ex1.c	/^  PetscBool  doOdd;                  \/\/ Construct field over odd cells indicating process number$/;"	m	struct:__anon6	file:
doPartition	src/dm/impls/mesh/examples/tutorials/ex1.c	/^  PetscBool  doPartition;            \/\/ Construct field over cells indicating process number$/;"	m	struct:__anon6	file:
doStratify	include/sieve/Sieve.hh	/^      bool doStratify;$/;"	m	class:ALE::Sieve
dof	bin/TOPSGenerator.py	/^        dof = int(enterbox("Number of degrees of freedom per grid point?",title,argDefaultText="1"))$/;"	v
dof	include/petscdm.h	/^  PetscInt   dof;    \/* The number of components to interpolate *\/$/;"	m	struct:_DMInterpolationInfo
dof	include/petscdmdatypes.h	/^  PetscInt         dim,dof,sw;$/;"	m	struct:__anon5
dof	include/petscdmmesh.h	/^  PetscInt   dof;    \/* The number of components to interpolate *\/$/;"	m	struct:_DMMeshInterpolationInfo
dolfin	src/dm/impls/mesh/examples/tutorials/mesh_surgery.cxx	/^  PetscBool  dolfin;$/;"	m	struct:__anon2	file:
domainerror	include/petsc-private/snesimpl.h	/^  PetscBool   domainerror;       \/* set with SNESSetFunctionDomainError() *\/$/;"	m	struct:_p_SNES
donotstash	include/petsc-private/vecimpl.h	/^  PetscBool     donotstash;$/;"	m	struct:__anon24
dot	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*dot)(Vec,Vec,PetscScalar*);             \/* z = x^H * y *\/$/;"	m	struct:_VecOps
dot_local	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*dot_local)(Vec,Vec,PetscScalar*);$/;"	m	struct:_VecOps
dotnorm2	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*dotnorm2)(Vec,Vec,PetscScalar*,PetscScalar*);$/;"	m	struct:_VecOps
downCells	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^  int    *downCells;$/;"	m	struct:__anon4	file:
downLoad	config/BuildSystem/config/package.py	/^  def downLoad(self):$/;"	m	class:Package
downLoadBlasLapack	config/BuildSystem/config/packages/BlasLapack.py	/^  def downLoadBlasLapack(self, f2c, l):$/;"	m	class:Configure
downX	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^  double *downX;$/;"	m	struct:__anon4	file:
downY	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^  double *downY;$/;"	m	struct:__anon4	file:
downZ	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^  double *downZ;$/;"	m	struct:__anon4	file:
downloadPETSc	config/BuildSystem/config/packages/PETSc.py	/^  def downloadPETSc(self):$/;"	m	class:Configure
downloadPETSc	config/PETSc/petsc.py	/^  def downloadPETSc(self):$/;"	m	class:Configure
downloadPackage	config/configure.py	/^def downloadPackage(url, filename, targetDirname):$/;"	f
draw	include/petscdraw.h	/^  PetscDraw draw;$/;"	m	struct:__anon15
dryRun	config/builder.py	/^ def dryRun(self):$/;"	m	class:PETScMaker
dscale	include/petsc-private/kspimpl.h	/^  PetscBool    dscale;       \/* diagonal scale system; used with KSPSetDiagonalScale() *\/$/;"	m	struct:_p_KSP
dscalefix	include/petsc-private/kspimpl.h	/^  PetscBool    dscalefix;    \/* unscale system after solve *\/$/;"	m	struct:_p_KSP
dscalefix2	include/petsc-private/kspimpl.h	/^  PetscBool    dscalefix2;   \/* system has been unscaled *\/$/;"	m	struct:_p_KSP
dsieve_type	include/sieve/Completion.hh	/^      typedef typename ALE::DiscreteSieve<point_type, alloc_type>                         dsieve_type;$/;"	t	class:ALE::New::Completion
dsieve_type	include/sieve/SectionCompletion.hh	/^      typedef typename ALE::DiscreteSieve<point_type, point_alloc_type>                        dsieve_type;$/;"	t	class:ALE::New::SectionCompletion
dsieve_type	src/dm/impls/mesh/examples/tests/overlap2.cxx	/^typedef ALE::Test::OverlapTest::dsieve_type       dsieve_type;$/;"	t	file:
dsieve_type	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^      typedef ALE::New::DiscreteSieve<point_type>                                   dsieve_type;$/;"	t	class:ALE::Test::OverlapTest
dt	include/petscmat.h	/^  PetscReal     dt;             \/* drop tolerance *\/$/;"	m	struct:__anon96
dt_max	include/petsc-private/tsimpl.h	/^  PetscReal   dt_min,dt_max;$/;"	m	struct:_p_TSAdapt
dt_min	include/petsc-private/tsimpl.h	/^  PetscReal   dt_min,dt_max;$/;"	m	struct:_p_TSAdapt
dtcol	include/petscmat.h	/^  PetscReal     dtcol;          \/* tolerance for pivoting *\/$/;"	m	struct:__anon96
dtcount	include/petscmat.h	/^  PetscReal     dtcount;        \/* maximum nonzeros to be allowed per row *\/$/;"	m	struct:__anon96
dtype	include/petsc-private/bagimpl.h	/^  PetscDataType dtype;$/;"	m	struct:_n_PetscBagItem
dummy100	include/petsc-private/matimpl.h	/^  PetscErrorCode (*dummy100)(Mat);$/;"	m	struct:_MatOps
dummy101	include/petsc-private/matimpl.h	/^  PetscErrorCode (*dummy101)(Mat);$/;"	m	struct:_MatOps
dummy210	include/petsc-private/matimpl.h	/^  PetscErrorCode (*dummy210)(Mat);$/;"	m	struct:_MatOps
dummy29	include/petsc-private/matimpl.h	/^  PetscErrorCode (*dummy29)(Mat);$/;"	m	struct:_MatOps
dummy3	include/petsc-private/matimpl.h	/^  PetscErrorCode (*dummy3)(Mat,void*);$/;"	m	struct:_MatOps
dummy4	include/petsc-private/matimpl.h	/^  PetscErrorCode (*dummy4)(Mat,Vec,Vec,Vec);$/;"	m	struct:_MatOps
dummy5	include/petsc-private/matimpl.h	/^  PetscErrorCode (*dummy5)(void);$/;"	m	struct:_MatOps
dummy98	include/petsc-private/matimpl.h	/^  PetscErrorCode (*dummy98)(Mat);$/;"	m	struct:_MatOps
dummy99	include/petsc-private/matimpl.h	/^  PetscErrorCode (*dummy99)(Mat);$/;"	m	struct:_MatOps
dumpCMakeConfig	config/PETSc/Configure.py	/^  def dumpCMakeConfig(self):$/;"	m	class:Configure
dumpCMakeLists	config/PETSc/Configure.py	/^  def dumpCMakeLists(self):$/;"	m	class:Configure
dumpConfFiles	config/BuildSystem/config/framework.py	/^  def dumpConfFiles(self):$/;"	m	class:Framework
dumpConfigInfo	config/PETSc/Configure.py	/^  def dumpConfigInfo(self):$/;"	m	class:Configure
dumpMachineInfo	config/PETSc/Configure.py	/^  def dumpMachineInfo(self):$/;"	m	class:Configure
dumpSubstitutions	config/BuildSystem/config/framework.py	/^  def dumpSubstitutions(self):$/;"	m	class:Framework
duplicate	include/petsc-private/isimpl.h	/^  PetscErrorCode (*duplicate)(IS,IS*);$/;"	m	struct:_ISOps
duplicate	include/petsc-private/kspimpl.h	/^  PetscErrorCode (*duplicate)(DMKSP,DMKSP);$/;"	m	struct:_DMKSPOps
duplicate	include/petsc-private/matimpl.h	/^  PetscErrorCode (*duplicate)(Mat,MatDuplicateOption,Mat*);$/;"	m	struct:_MatOps
duplicate	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*duplicate)(DMSNES,DMSNES);$/;"	m	struct:_DMSNESOps
duplicate	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*duplicate)(DMTS,DMTS);$/;"	m	struct:_DMTSOps
duplicate	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*duplicate)(Vec,Vec*);         \/* get single vector *\/$/;"	m	struct:_VecOps
duplicatevecs	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*duplicatevecs)(Vec,PetscInt,Vec**);     \/* get array of vectors *\/$/;"	m	struct:_VecOps
dupparent	include/petscsys.h	/^  MPI_Comm   dupparent;   \/* duplicate parent communicator, under which the processors of this subcomm have contiguous rank *\/$/;"	m	struct:_n_PetscSubcomm
e	include/petsc-private/dmdaimpl.h	/^  PetscInt              *e;                  \/* the elements *\/$/;"	m	struct:__anon23
edata	include/petscoptions.h	/^  void              *edata;$/;"	m	struct:_n_PetscOptions
edgePoints	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^  int edgePoints;$/;"	m	struct:ALE::Coarsener::coarsen_Stats
edgeSegments	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^  int edgeSegments; \/\/$/;"	m	struct:ALE::Coarsener::coarsen_Stats
edit	config/BuildSystem/build/bk.py	/^  def edit(self, set):$/;"	m	class:Open
edit	config/BuildSystem/emacsclient.py	/^def edit(astring):$/;"	f
edit	config/BuildSystem/sourceControl.py	/^  def edit(self, files):$/;"	m	class:BitKeeper
edit	config/BuildSystem/sourceControl.py	/^  def edit(self, files):$/;"	m	class:VersionControl
editServer	config/BuildSystem/config/compile/SIDL.py	/^  def editServer(self, serverDirs):$/;"	m	class:Compiler
editServer	config/BuildSystem/maker.py	/^  def editServer(self, builder, sidlFile):$/;"	m	class:SIDLMake
eigviewer	include/petsc-private/kspimpl.h	/^  PetscViewer  eigviewer;   \/* Viewer where computed eigenvalues are displayed *\/$/;"	m	struct:_p_KSP
eind_Zoltan	src/dm/impls/mesh/meshzoltan.c	/^int *eind_Zoltan;      \/\/ The vertices in each hyperedge, indexed by eptr$/;"	v
element	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^      element  = DiscontinuousLagrange(default_simplex(dim), order)$/;"	v
element	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^      element  = DiscontinuousLagrange(default_simplex(dim-1), order)$/;"	v
element	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^      element  = Lagrange(default_simplex(dim), order)$/;"	v
element	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^      element  = Lagrange(default_simplex(dim-1), order)$/;"	v
element	bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py	/^    element  = DiscontinuousLagrange(default_simplex(1), order)$/;"	v
element	bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py	/^    element  = Lagrange(default_simplex(1), order)$/;"	v
element_type	include/sieve/ALE_containers.hh	/^    typedef Element_                                                                   element_type;$/;"	t	class:ALE::set
elements	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^elements   = []$/;"	v
elements	bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py	/^elements   = []$/;"	v
elementtype	include/petsc-private/dmdaimpl.h	/^  DMDAElementType       elementtype;$/;"	m	struct:__anon23
ellipse	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*ellipse)(PetscDraw,PetscReal,PetscReal,PetscReal,PetscReal,int);$/;"	m	struct:_PetscDrawOps
embedDim	include/petscdmmesh_formats.hh	/^      unsigned int embedDim; \/\/ The embedding dimension$/;"	m	class:ALE::Dolfin::XMLMesh
empty	include/sieve/ALE_containers.hh	/^    virtual bool         empty() {return this->_index.empty();};$/;"	f	struct:ALE::IndexSequence
empty	include/sieve/CartesianSieve.hh	/^      virtual bool     empty() {return this->_start >= this->_end;};$/;"	f	class:ALE::CartesianSieveDef::PointSequence
empty	include/sieve/LabelSifter.hh	/^        virtual bool         empty() {return this->_index.empty();};$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
empty	include/sieve/Sieve.hh	/^       virtual bool empty(){return this->_index.empty();};$/;"	f	class:ALE::SieveDef::RecContainerTraits::PointSequence
empty	include/sieve/Sieve.hh	/^       virtual bool empty(){return this->_index.empty();};$/;"	f	class:ALE::SieveDef::RecContainerTraits::TwoValueSequence
empty	include/sieve/Sieve.hh	/^       virtual bool empty(){return this->_index.empty();};$/;"	f	class:ALE::SieveDef::RecContainerTraits::ValueSequence
empty	include/sieve/Sifter.hh	/^        virtual bool         empty() {return this->_index.empty();};$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
empty	include/sieve/Sifter.hh	/^       virtual bool empty(){return this->_index.empty();};$/;"	f	class:ALE::SifterDef::RecContainerTraits::PointSequence
end	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*end)(VecScatter,Vec,Vec,InsertMode,ScatterMode);$/;"	m	struct:_p_VecScatter
end	include/petsclog.hh	/^    void end(PetscObject o1 = NULL, PetscObject o2 = NULL, PetscObject o3 = NULL, PetscObject o4 = NULL) {$/;"	f	class:PETSc::LogEvent
end	include/sieve/BasicCommunication.hh	/^    void end() {$/;"	f	class:ALE::MPIMover
end	include/sieve/CartesianSieve.hh	/^      virtual iterator end()   {return iterator(this->_dim, this->_sizes, this->_indices, this->_dim ? 1 << this->_dim: 0);};$/;"	f	class:ALE::CartesianSieveDef::SupportSequence
end	include/sieve/CartesianSieve.hh	/^      virtual iterator end()   {return iterator(this->_end);};$/;"	f	class:ALE::CartesianSieveDef::PointSequence
end	include/sieve/CartesianSieve.hh	/^      virtual iterator end() {$/;"	f	class:ALE::CartesianSieveDef::ConeSequence
end	include/sieve/Field.hh	/^    const_iterator end()   const {return const_iterator(this->_map.end());};$/;"	f	class:ALE::SetFromMap
end	include/sieve/ISieve.hh	/^      virtual iterator end()   const {return iterator(_data, _end);};$/;"	f	class:ALE::IFSieveDef::Sequence
end	include/sieve/ISieve.hh	/^    const_iterator end() const {return const_iterator(this->_max);};$/;"	f	class:ALE::Interval
end	include/sieve/LabelSifter.hh	/^        virtual iterator end() {$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
end	include/sieve/Overlap.hh	/^  iterator end()   {return endP;};$/;"	f	class:PETSc::PointerSequence
end	include/sieve/Overlap.hh	/^  iterator end()   {return iterator(endP,   endRemoteP);};$/;"	f	class:PETSc::DualSequence
end	include/sieve/Sieve.hh	/^       virtual iterator end() {$/;"	f	class:ALE::SieveDef::RecContainerTraits::PointSequence
end	include/sieve/Sieve.hh	/^       virtual iterator end() {$/;"	f	class:ALE::SieveDef::RecContainerTraits::TwoValueSequence
end	include/sieve/Sieve.hh	/^       virtual iterator end() {$/;"	f	class:ALE::SieveDef::RecContainerTraits::ValueSequence
end	include/sieve/Sifter.hh	/^        virtual iterator end() {$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
end	include/sieve/Sifter.hh	/^       virtual iterator end() {$/;"	f	class:ALE::SifterDef::RecContainerTraits::PointSequence
endCommunication	include/sieve/Field.hh	/^    void endCommunication() {$/;"	f	class:ALE::Field
endP	include/sieve/Overlap.hh	/^  const Value *endP;$/;"	m	class:PETSc::PointerSequence
endP	include/sieve/Overlap.hh	/^  const first_type  *endP;$/;"	m	class:PETSc::DualSequence
endRemoteP	include/sieve/Overlap.hh	/^  const second_type *endRemoteP;$/;"	m	class:PETSc::DualSequence
endhook	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*endhook)(DM,Vec,InsertMode,Vec,void*);$/;"	m	struct:_DMGlobalToLocalHookLink
endpage	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*endpage)(PetscDraw);$/;"	m	struct:_PetscDrawOps
ensureCachedRanks	include/sieve/Overlap.hh	/^  void ensureCachedRanks() {$/;"	f	class:PETSc::Overlap
ensureCone	include/sieve/Sections.hh	/^      void ensureCone(const int size) {$/;"	f	class:ALE::New::ArrowSection
ensureCone	include/sieve/Sections.hh	/^      void ensureCone(const int size) {$/;"	f	class:ALE::New::ConeSection
ensureSize	include/sieve/ISieve.hh	/^      void ensureSize(const int size) {$/;"	f	class:ALE::ISieveVisitor::IndicesVisitor
ensureSize	include/sieve/ISieve.hh	/^      void ensureSize(const int size) {$/;"	f	class:ALE::ISieveVisitor::RestrictVecVisitor
ensureSize	include/sieve/ISieve.hh	/^      void ensureSize(const int size) {$/;"	f	class:ALE::ISieveVisitor::RestrictVisitor
ensureSupport	include/sieve/Sections.hh	/^      void ensureSupport(const int size) {$/;"	f	class:ALE::New::SupportSection
ensurelist	config/PETSc/Configure.py	/^    def ensurelist(a):$/;"	f	function:Configure.dumpCMakeConfig
enterbox	bin/TOPSInstaller.py	/^def enterbox(message="Enter something.", title="", argDefaultText=""):$/;"	f
enum	config/PETSc/utilities/cacheDetails.py	/^  def enum(self):$/;"	m	class:CacheAttribute
enumerate	config/BuildSystem/config/framework.py	/^  def enumerate(l):$/;"	f
enumerate	config/BuildSystem/config/libraries.py	/^  def enumerate(l):$/;"	f
enumerate	config/BuildSystem/logger.py	/^  def enumerate(l):$/;"	f
epilog	config/builder2.py	/^                                   epilog          = 'For more information, visit http:\/\/www.mcs.anl.gov\/petsc',$/;"	v
eptr_Zoltan	src/dm/impls/mesh/meshzoltan.c	/^int *eptr_Zoltan;      \/\/ The offsets of each hyperedge$/;"	v
equal	include/petsc-private/matimpl.h	/^  PetscErrorCode (*equal)(Mat,Mat,PetscBool  *);$/;"	m	struct:_MatOps
equal	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  void equal(const ALE::Point& a, const ALE::Point& b) {$/;"	f	struct:reorderedComparator
equal	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  void equal(const double& a, const double& b) {$/;"	f	struct:reorderedComparator
equal	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  void equal(const int& a, const int& b) {$/;"	f	struct:reorderedComparator
equation_type	include/petsc-private/tsimpl.h	/^  TSEquationType equation_type;$/;"	m	struct:_p_TS
errno	config/BuildSystem/RDict.py	/^    import errno$/;"	i
errno	config/BuildSystem/sourceDatabase.py	/^import errno$/;"	i
error	bin/urlget.py	/^def error(*args):$/;"	f
error	config/BuildSystem/script.py	/^          error = 'Runaway process exceeded time limit of '+str(timeout)+'s\\n'$/;"	v	class:Script.executeShellCommand.runInShell.InShell
error_rel	include/petsc-private/matimpl.h	/^  PetscReal      error_rel;        \/* square root of relative error in computing function *\/$/;"	m	struct:_p_MatFDColoring
errorifnotconverged	include/petsc-private/kspimpl.h	/^  PetscBool          errorifnotconverged;    \/* create an error if the KSPSolve() does not converge *\/$/;"	m	struct:_p_KSP
errorifnotconverged	include/petsc-private/snesimpl.h	/^  PetscBool           errorifnotconverged;$/;"	m	struct:_p_SNES
errorifstepfailed	include/petsc-private/tsimpl.h	/^  PetscBool errorifstepfailed;$/;"	m	struct:_p_TS
escape	config/PETSc/Configure.py	/^    def escape(s):$/;"	f	function:Configure.dumpMachineInfo
evaluate	include/sieve/Mesh.hh	/^    PetscReal evaluate(const PetscReal coords[]) const {return this->_func(coords);};$/;"	f	class:ALE::BoundaryCondition
evaluate	include/sieve/UFC.hh	/^  virtual void evaluate(double * values, const double * coordinates, const ufc::cell &c) const {$/;"	f	class:function_wrapper_scalar
evaluateRHS	include/sieve/FEMProblem.hh	/^      virtual double evaluateRHS(int dof) {$/;"	f	class:ALE::Problem::GeneralDiscretization
evaluateRHS	include/sieve/UFCProblem.hh	/^      virtual double evaluateRHS(int dof) {$/;"	f	class:ALE::Problem::UFCDiscretization
evaluatestep	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*evaluatestep)(TS,PetscInt,Vec,PetscBool*);$/;"	m	struct:_TSOps
event	include/petsc-private/logimpl.h	/^  PetscLogEvent  event;         \/* The event number *\/$/;"	m	struct:_Action
eventInfo	include/petsclog.h	/^  PetscEventPerfInfo *eventInfo; \/* The performance information for each event *\/$/;"	m	struct:_n_PetscEventPerfLog
eventInfo	include/petsclog.h	/^  PetscEventRegInfo *eventInfo; \/* The registration information for each event *\/$/;"	m	struct:_n_PetscEventRegLog
eventLog	include/petsclog.h	/^  PetscEventPerfLog  eventLog;  \/* The event information for this stage *\/$/;"	m	struct:_PetscStageInfo
eventLog	include/petsclog.h	/^  PetscEventRegLog eventLog;    \/* The registered events *\/$/;"	m	struct:_n_PetscStageLog
event_registry	include/petsclog.hh	/^    static std::map<std::string,LogEvent> event_registry;$/;"	m	class:PETSc::Log
ex10	bin/matlab/classes/examples/tutorials/ex10.m.html	/^function ex10(args)$/;"	f
exact_final_time	include/petsc-private/tsimpl.h	/^  TSExactFinalTimeOption  exact_final_time;$/;"	m	struct:_p_TS
excludeBase	include/sieve/Sifter.hh	/^    excludeBase(const Obj<InputSequence>& points) {$/;"	f	class:ALE::ASifter
excludeCap	include/sieve/Sifter.hh	/^    excludeCap(const Obj<InputSequence>& points) {$/;"	f	class:ALE::ASifter
execute	config/BuildSystem/build/builder.py	/^  def execute(self, start = None, input = None):$/;"	m	class:Builder
executeGraph	config/BuildSystem/build/framework.py	/^  def executeGraph(self, graph, start = None, input = None, end = None):$/;"	m	class:Framework
executeSection	config/BuildSystem/maker.py	/^  def executeSection(self, section, *args):$/;"	m	class:Make
executeShellCode	config/BuildSystem/config/autoconf.py	/^  def executeShellCode(self, code):$/;"	m	class:Configure
executeShellCommand	config/BuildSystem/regression/buildtest.py	/^  def executeShellCommand(self, command, checkCommand = None):$/;"	m	class:RemoteBuild
executeShellCommand	config/BuildSystem/script.py	/^  def executeShellCommand(command, checkCommand = None, timeout = 600.0, log = None, lineLimit = 0, cwd=None):$/;"	m	class:Script
executeShellCommand	config/BuildSystem/script.py	/^  executeShellCommand = staticmethod(executeShellCommand)$/;"	v	class:Script
executeTarget	config/BuildSystem/build/framework.py	/^  def executeTarget(self, target):$/;"	m	class:Framework
executeTest	config/BuildSystem/config/base.py	/^  def executeTest(self, test, args = [], kargs = {}):$/;"	m	class:Configure
exists	config/BuildSystem/patch.py	/^  from os.path import exists$/;"	i
exists	config/BuildSystem/patch.py	/^from os.path import exists, isabs, isfile, abspath, normpath$/;"	i
exo_KnownElements	src/dm/impls/mesh/examples/tests/TestMeshExodus.c	/^const char exo_KnownElements[] = "tri,tri3,triangle,triangle3,quad,quad4,tet,tet4,tetra,tetra4,hex,hex8";$/;"	v
exo_hexfaces	src/dm/impls/mesh/examples/tests/TestMeshExodus.c	/^const PetscInt exo_hexfaces[6][4]  = {{0,1,5,4}, {1,2,6,5}, {2,3,7,6}, {0,4,7,3}, {0,3,2,1}, {4,5,6,7}};$/;"	v
exo_quadfaces	src/dm/impls/mesh/examples/tests/TestMeshExodus.c	/^const PetscInt exo_quadfaces[4][2] = {{0,1}, {1,2}, {2,3}, {3,0}};$/;"	v
exo_tetfaces	src/dm/impls/mesh/examples/tests/TestMeshExodus.c	/^const PetscInt exo_tetfaces[4][3]  = {{0,1,3}, {1,2,3}, {2,0,3}, {0,1,2}};$/;"	v
exo_trifaces	src/dm/impls/mesh/examples/tests/TestMeshExodus.c	/^const PetscInt exo_trifaces[3][2]  = {{0,1}, {1,2}, {2,0}};$/;"	v
exp	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*exp)(Vec);$/;"	m	struct:_VecOps
expandArchive	config/builder.py	/^ def expandArchive(self, archive, objDir):$/;"	m	class:PETScMaker
expandInterval	include/sieve/Mesh.hh	/^    void expandInterval(const index_type& interval, PetscInt indices[], PetscInt *indx) {$/;"	f	class:ALE::Bundle
expandInterval	include/sieve/Mesh.hh	/^    void expandInterval(const index_type& interval, const int orientation, PetscInt indices[], PetscInt *indx) {$/;"	f	class:ALE::Bundle
expandIntervals	include/sieve/Mesh.hh	/^    void expandIntervals(Obj<oIndexArray> intervals, PetscInt *indices) {$/;"	f	class:ALE::Bundle
expandTargets	config/BuildSystem/build/framework.py	/^  def expandTargets(self,target):$/;"	m	class:Framework
extTest	config/BuildSystem/build/fileset.py	/^  def extTest(self, file):$/;"	m	class:ExtensionFileSet
extend	config/BuildSystem/build/fileset.py	/^  def extend(self, l):$/;"	m	class:FileSet
extendby	config/PETSc/Configure.py	/^      def extendby(lib):$/;"	f	function:Configure.dumpCMakeConfig.writeBuildFlags
extension	bin/urlget.py	/^def extension(filename):$/;"	f
externalPackagesDir	config/BuildSystem/config/package.py	/^  externalPackagesDir = property(getExternalPackagesDir, setExternalPackagesDir, doc = 'The directory for downloaded packages')$/;"	v	class:Package
extraArguments	config/BuildSystem/config/compile/C.py	/^  extraArguments = property(getExtraArguments, config.compile.processor.Processor.setExtraArguments, doc = 'Optional arguments for the end of the command')$/;"	v	class:DynamicLinker
extraArguments	config/BuildSystem/config/compile/C.py	/^  extraArguments = property(getExtraArguments, config.compile.processor.Processor.setExtraArguments, doc = 'Optional arguments for the end of the command')$/;"	v	class:Linker
extraArguments	config/BuildSystem/config/compile/C.py	/^  extraArguments = property(getExtraArguments, config.compile.processor.Processor.setExtraArguments, doc = 'Optional arguments for the end of the command')$/;"	v	class:SharedLinker
extraArguments	config/BuildSystem/config/compile/CUDA.py	/^  extraArguments = property(getExtraArguments, config.compile.processor.Processor.setExtraArguments, doc = 'Optional arguments for the end of the command')$/;"	v	class:Linker
extraArguments	config/BuildSystem/config/compile/Cxx.py	/^  extraArguments = property(getExtraArguments, config.compile.processor.Processor.setExtraArguments, doc = 'Optional arguments for the end of the command')$/;"	v	class:Linker
extraArguments	config/BuildSystem/config/compile/Cxx.py	/^  extraArguments = property(getExtraArguments, config.compile.processor.Processor.setExtraArguments, doc = 'Optional arguments for the end of the command')$/;"	v	class:SharedLinker
extraArguments	config/BuildSystem/config/compile/FC.py	/^  extraArguments = property(getExtraArguments, config.compile.processor.Processor.setExtraArguments, doc = 'Optional arguments for the end of the command')$/;"	v	class:Linker
extraArguments	config/BuildSystem/config/compile/processor.py	/^  extraArguments = property(getExtraArguments, setExtraArguments, doc = 'Optional arguments for the end of the command')$/;"	v	class:Processor
extraLibrariesIter	config/BuildSystem/build/processor.py	/^  def extraLibrariesIter(self):$/;"	m	class:Linker
extraLogs	config/configure.py	/^extraLogs = []$/;"	v
extra_nodes	include/petscmat.h	/^  PetscCDIntNd *extra_nodes;$/;"	m	struct:_PetscCoarsenData
extractTests	config/builder.py	/^  def extractTests(self, filename):$/;"	m	class:MakeParser
extractor_type	include/sieve/ALE_containers.hh	/^    typedef ValueExtractor_                          extractor_type;$/;"	t	struct:ALE::IndexSequence
extractor_type	include/sieve/LabelSifter.hh	/^        typedef ValueExtractor_                        extractor_type;$/;"	t	class:ALE::NewSifterDef::IndexSequenceTraits::iterator_base
extractor_type	include/sieve/LabelSifter.hh	/^        typedef typename iterator_base::extractor_type     extractor_type;$/;"	t	class:ALE::NewSifterDef::IndexSequenceTraits::iterator
extractor_type	include/sieve/LabelSifter.hh	/^        typedef typename iterator_base::extractor_type     extractor_type;$/;"	t	class:ALE::NewSifterDef::ReversibleIndexSequenceTraits::reverse_iterator
extractor_type	include/sieve/Sifter.hh	/^        typedef ValueExtractor_                        extractor_type;$/;"	t	class:ALE::SifterDef::IndexSequenceTraits::iterator_base
extractor_type	include/sieve/Sifter.hh	/^        typedef typename iterator_base::extractor_type     extractor_type;$/;"	t	class:ALE::SifterDef::IndexSequenceTraits::iterator
extractor_type	include/sieve/Sifter.hh	/^        typedef typename iterator_base::extractor_type     extractor_type;$/;"	t	class:ALE::SifterDef::ReversibleIndexSequenceTraits::reverse_iterator
f	bin/TOPSGenerator.py	/^        f = file(os.path.join(app,'makefile'),'w')$/;"	v
f	bin/TOPSGenerator.py	/^        f = file(os.path.join(app,'server','c++',app+'_System_Impl.cc'),'r')$/;"	v
f	bin/TOPSGenerator.py	/^        f = file(os.path.join(app,'server','c++',app+'_System_Impl.cc'),'w')$/;"	v
f	bin/TOPSGenerator.py	/^        f = file(os.path.join(app,'server','c++',app+'_System_Impl.hh'),'r')$/;"	v
f	bin/TOPSGenerator.py	/^        f = file(os.path.join(app,'server','c++',app+'_System_Impl.hh'),'w')$/;"	v
f	bin/TOPSGenerator.py	/^        f = file(os.path.join(app,app+'.sidl'), 'w')$/;"	v
f	bin/TOPSGenerator.py	/^        f = file(os.path.join(app,app+'_rc.in'),'w')$/;"	v
f	bin/TOPSInstaller.py	/^			f = fileopenbox()$/;"	v
f	bin/TOPSInstaller.py	/^			f = filesavebox()$/;"	v
f	bin/TOPSInstaller.py	/^             f = i.find('(')$/;"	v
f	bin/TOPSInstaller.py	/^        f = file(configfile, 'w')$/;"	v
f	bin/pythonscripts/PetscStaticFunctionCandidates.py	/^  f = open(file, "r");$/;"	v
f	include/petsc-private/matimpl.h	/^  PetscErrorCode (*f)(void);       \/* function that defines Jacobian *\/$/;"	m	struct:_p_MatFDColoring
f	include/sieve/Selection.hh	/^      point_type&            f;$/;"	m	class:ALE::Selection::FaceInserterV
f	include/sieve/Selection.hh	/^      point_type&           f;$/;"	m	class:ALE::Selection::FaceInserter
f0BdFuncs	include/petscdm.h	/^  void (**f0BdFuncs)(const PetscScalar[], const PetscScalar[], const PetscReal[], const PetscReal[], PetscScalar[]); \/* The f_0 functions for each field *\/$/;"	m	struct:__anon20
f0Funcs	include/petscdm.h	/^  void (**f0Funcs)(const PetscScalar[], const PetscScalar[], const PetscReal[], PetscScalar[]); \/* The f_0 functions for each field *\/$/;"	m	struct:__anon20
f1BdFuncs	include/petscdm.h	/^  void (**f1BdFuncs)(const PetscScalar[], const PetscScalar[], const PetscReal[], const PetscReal[], PetscScalar[]); \/* The f_1 functions for each field *\/$/;"	m	struct:__anon20
f1Funcs	include/petscdm.h	/^  void (**f1Funcs)(const PetscScalar[], const PetscScalar[], const PetscReal[], PetscScalar[]); \/* The f_1 functions for each field *\/$/;"	m	struct:__anon20
face	include/sieve/Selection.hh	/^      FaceType& face;$/;"	m	class:ALE::Selection::FaceVisitor
faceAreas	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^  double *faceAreas;$/;"	m	struct:__anon4	file:
faceOrientation	include/sieve/Selection.hh	/^    static bool faceOrientation(const point_type& cell, const Obj<Mesh>& mesh, const int numCorners,$/;"	f	class:ALE::Selection
faceRecognizer	include/sieve/Partitioner.hh	/^      Recognizer& faceRecognizer;$/;"	m	class:ALE::Partitioner::MeetVisitor
faceVertices	include/sieve/Selection.hh	/^      PointArray            *faceVertices;$/;"	m	class:ALE::Selection::FaceInserterV
faceVertices	include/sieve/Selection.hh	/^      PointArray           *faceVertices;$/;"	m	class:ALE::Selection::FaceInserter
faceVertices	include/sieve/Selection.hh	/^      PointArray&     faceVertices;$/;"	m	class:ALE::Selection::FaceVisitor
facesTmp	include/petsc-private/dmpleximpl.h	/^  PetscInt            *facesTmp;          \/* Work space for faces operation *\/$/;"	m	struct:__anon30
factor_mallocs	include/petscmat.h	/^  PetscLogDouble factor_mallocs;                     \/* number of mallocs during factorization *\/$/;"	m	struct:__anon93
factortype	include/petsc-private/matimpl.h	/^  MatFactorType          factortype;       \/* MAT_FACTOR_LU, ILU, CHOLESKY or ICC *\/$/;"	m	struct:_p_Mat
fctx	include/petsc-private/matimpl.h	/^  void           *fctx;            \/* optional user-defined context for use by the function f *\/$/;"	m	struct:_p_MatFDColoring
fd	config/install.py	/^  fd = file(os.path.join('conf','petscvariables'))$/;"	v
fd	include/petsc-private/dmimpl.h	/^  MatFDColoring           fd;$/;"	m	struct:_p_DM
fd_pipe	include/sieve/Partitioner.hh	/^      int        fd_stdout, fd_pipe[2];$/;"	m	class:ALE::Chaco::Partitioner
fd_stdout	include/sieve/Partitioner.hh	/^      int        fd_stdout, fd_pipe[2];$/;"	m	class:ALE::Chaco::Partitioner
fdcoloringapply	include/petsc-private/matimpl.h	/^  PetscErrorCode (*fdcoloringapply)(Mat,MatFDColoring,Vec,MatStructure*,void*);$/;"	m	struct:_MatOps
fdcoloringcreate	include/petsc-private/matimpl.h	/^  PetscErrorCode (*fdcoloringcreate)(Mat,ISColoring,MatFDColoring);$/;"	m	struct:_MatOps
fem	src/dm/impls/plex/examples/tests/ex3.c	/^  PetscFEM      fem;               \/* REQUIRED to use DMPlexComputeResidualFEM() *\/$/;"	m	struct:__anon3	file:
fiatDir	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^  fiatDir   = os.path.join(os.environ['PETSC_DIR'],os.environ['PETSC_ARCH'],'lib', 'python'+'.'.join(map(str, sys.version_info[0:2])), 'site-packages')$/;"	v
fiatDir	bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py	/^  fiatDir   = os.path.join(os.environ['PETSC_DIR'],os.environ['PETSC_ARCH'],'lib', 'python'+'.'.join(map(str, sys.version_info[0:2])), 'site-packages')$/;"	v
fiber_type	include/sieve/Field.hh	/^    typedef struct {value_type v[fiberDim];}                                                      fiber_type;$/;"	t	class:ALE::NewUniformSection	typeref:struct:ALE::NewUniformSection::__anon4
fiber_type	include/sieve/Field.hh	/^    typedef struct {value_type v[fiberDim];}                 fiber_type;$/;"	t	class:ALE::UniformSection	typeref:struct:ALE::UniformSection::__anon3
fiber_type	include/sieve/IField.hh	/^    typedef struct {value_type v[fiberDim];}                        fiber_type;$/;"	t	class:ALE::IUniformSection	typeref:struct:ALE::IUniformSection::__anon6
field	include/petsc-private/characteristicimpl.h	/^  PassiveScalar field[MAX_COMPONENTS]; \/* Field being advected *\/$/;"	m	struct:_p_Item
field	include/petsc-private/characteristicimpl.h	/^  Vec          field;           \/* Field field at t_n *\/$/;"	m	struct:_p_Characteristic
field	include/petsc-private/isimpl.h	/^  PetscSection                 *field;        \/* A section describing the layout and constraints for each field *\/$/;"	m	struct:_p_PetscSection
fieldComp	include/petsc-private/characteristicimpl.h	/^  PetscInt    *fieldComp;       \/* Components of the field in the DM *\/$/;"	m	struct:_p_Characteristic
fieldCtx	include/petsc-private/characteristicimpl.h	/^  void        *fieldCtx;        \/* User context for field inteprolation *\/$/;"	m	struct:_p_Characteristic
fieldDA	include/petsc-private/characteristicimpl.h	/^  DM           fieldDA;         \/* DM for the field field *\/$/;"	m	struct:_p_Characteristic
fieldInterp	include/petsc-private/characteristicimpl.h	/^  PetscErrorCode (*fieldInterp)(Vec, PetscReal [], PetscInt, PetscInt [], PetscScalar [], void *);$/;"	m	struct:_p_Characteristic
fieldInterpLocal	include/petsc-private/characteristicimpl.h	/^  PetscErrorCode (*fieldInterpLocal)(void *, PetscReal [], PetscInt, PetscInt [], PetscScalar [], void *);$/;"	m	struct:_p_Characteristic
fieldNames	include/petsc-private/isimpl.h	/^  const char                  **fieldNames;   \/* The field names *\/$/;"	m	struct:_p_PetscSection
fieldOld	include/petsc-private/characteristicimpl.h	/^  Vec          fieldOld;        \/* Field field at t_n-1 *\/$/;"	m	struct:_p_Characteristic
fieldSize	include/sieve/ISieve.hh	/^      PetscInt           *fieldSize;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
fieldSize	include/sieve/ISieve.hh	/^      PetscInt          *fieldSize;$/;"	m	class:ALE::ISieveVisitor::UpdateVecVisitor
fieldSize	include/sieve/ISieve.hh	/^      PetscInt    *fieldSize;$/;"	m	class:ALE::ISieveVisitor::SizeWithBCVisitor
fieldname	include/petsc-private/dmdaimpl.h	/^  char                  **fieldname;           \/* names of individual components in vectors *\/$/;"	m	struct:__anon23
fields	include/petsc-private/dmimpl.h	/^  PetscObject             *fields;$/;"	m	struct:_p_DM
file	bin/petscnagupgrade.py	/^  file     = os.path.join(petscdir,'.nagged')$/;"	v
file	include/petscerror.h	/^  const char      *file[PETSCSTACKSIZE];$/;"	m	struct:__anon13
fileRetrieve	config/BuildSystem/retrieval.py	/^  def fileRetrieve(self, url, root, name,force):$/;"	m	class:Retriever
fileState	config/BuildSystem/build/templates/SIDL.py	/^    import build.fileState$/;"	i
file_create_pause	config/BuildSystem/config/framework.py	/^  file_create_pause = property(getFileCreatePause, setFileCreatePause, doc = 'Add 1 sec pause between config temp file delete\/recreate')$/;"	v	class:Framework
fileinput	config/PETSc/packages/tetgen.py	/^    import fileinput$/;"	i
filename	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^filename = sys.argv[-1]$/;"	v
filename	bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py	/^filename = sys.argv[-1]$/;"	v
filename	src/dm/impls/mesh/examples/tests/ex1.c	/^  char          filename[2048];    \/* Optional filename to read mesh from *\/$/;"	m	struct:__anon16	file:
filename	src/dm/impls/mesh/examples/tests/ex2.c	/^  char          filename[2048];    \/* Optional filename to read mesh from *\/$/;"	m	struct:__anon17	file:
filename	src/dm/impls/mesh/examples/tests/ex3.c	/^  char          filename[2048];    \/* Optional filename to read mesh from *\/$/;"	m	struct:__anon15	file:
filename	src/dm/impls/moab/examples/tests/ex1.cxx	/^  char filename[PETSC_MAX_PATH_LEN];$/;"	m	class:AppCtx	file:
filename	src/dm/impls/plex/examples/tests/ex1.c	/^  char      filename[PETSC_MAX_PATH_LEN]; \/* Import mesh from file *\/$/;"	m	struct:__anon4	file:
filename	src/dm/impls/plex/examples/tests/ex7.c	/^  char      filename[PETSC_MAX_PATH_LEN]; \/* Import mesh from file *\/$/;"	m	struct:__anon1	file:
fileopenbox	bin/TOPSInstaller.py	/^def fileopenbox(msg=None, title=None, argInitialFile=None):$/;"	f
filesavebox	bin/TOPSInstaller.py	/^def filesavebox(msg=None, title=None, argInitialFile=None):$/;"	f
fileset	config/BuildSystem/build/bk.py	/^import build.fileset$/;"	i
fileset	config/BuildSystem/build/compile/SIDL.py	/^import build.fileset$/;"	i
fileset	config/BuildSystem/build/fileState.py	/^import build.fileset$/;"	i
fileset	config/BuildSystem/build/processor.py	/^import build.fileset$/;"	i
fileset	config/BuildSystem/build/transform.py	/^import build.fileset$/;"	i
fill	include/petscmat.h	/^  PetscReal     fill;           \/* expected fill, nonzeros in factored matrix\/nonzeros in original matrix *\/$/;"	m	struct:__anon96
fill	src/dm/impls/plex/examples/tests/ex6.c	/^  PetscReal fill;         \/* Percentage of label to fill *\/$/;"	m	struct:__anon2	file:
fillCount	include/petsc-private/characteristicimpl.h	/^  PetscInt    *fillCount;       \/* Number of Items requested by other processes *\/$/;"	m	struct:_p_Characteristic
fillMatrixWithZero	include/petscdmmesh.hh	/^PetscErrorCode fillMatrixWithZero(Mat A, const int bs, const ALE::Obj<Atlas>& atlas, const ALE::Obj<Order>& globalOrder, const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar>::sieve_type>& adjGraph, PetscBool isSymmetric, PetscInt dnz[], PetscInt onz[])$/;"	f
fillSend	include/sieve/SectionCompletion.hh	/^      static void fillSend(const Filler& sendFiller, const Obj<Section>& sendSection) {$/;"	f	class:ALE::New::SectionCompletion
fill_ratio_given	include/petscmat.h	/^  PetscLogDouble fill_ratio_given,fill_ratio_needed; \/* fill ratio for LU\/ILU *\/$/;"	m	struct:__anon93
fill_ratio_needed	include/petscmat.h	/^  PetscLogDouble fill_ratio_given,fill_ratio_needed; \/* fill ratio for LU\/ILU *\/$/;"	m	struct:__anon93
filter	bin/processSummary.py	/^  def filter(self, line):$/;"	m	class:LogSummarizer
filterCompileOutput	config/BuildSystem/config/base.py	/^  def filterCompileOutput(self, output):$/;"	m	class:Configure
filterCompileOutput	config/BuildSystem/config/framework.py	/^  def filterCompileOutput(self, output):$/;"	m	class:Framework
filterLinkOutput	config/BuildSystem/config/base.py	/^  def filterLinkOutput(self, output):$/;"	m	class:Configure
filterLinkOutput	config/BuildSystem/config/framework.py	/^  def filterLinkOutput(self, output):$/;"	m	class:Framework
filterPreprocessOutput	config/BuildSystem/config/framework.py	/^  def filterPreprocessOutput(self,output):$/;"	m	class:Framework
filterShellOutput	config/BuildSystem/config/compile/SIDL.py	/^  def filterShellOutput(self, output):$/;"	m	class:Compiler
findArch	config/builder.py	/^ def findArch(self):$/;"	m	class:PETScMaker
findArgument	config/BuildSystem/nargs.py	/^  def findArgument(key, argList):$/;"	m	class:Arg
findArgument	config/BuildSystem/nargs.py	/^  findArgument = staticmethod(findArgument)$/;"	v	class:Arg
findMPIInc	config/BuildSystem/config/packages/MPI.py	/^  def findMPIInc(self):$/;"	m	class:Configure
findUndefinedMacros	config/BuildSystem/config/autoconf.py	/^  def findUndefinedMacros(self, codeStr):$/;"	m	class:Configure
findnonzerorows	include/petsc-private/matimpl.h	/^  PetscErrorCode (*findnonzerorows)(Mat,IS*);$/;"	m	struct:_MatOps
findzerodiagonals	include/petsc-private/matimpl.h	/^  PetscErrorCode (*findzerodiagonals)(Mat,IS*);$/;"	m	struct:_MatOps
finiOutput	include/sieve/Generator.hh	/^      static void finiOutput(struct triangulateio *outputCtx) {$/;"	f	class:ALE::Triangle::Generator
finish	config/builder.py	/^  def finish(self):$/;"	m	class:Future
first	include/petsc-private/vecimpl.h	/^  PetscInt       first;$/;"	m	struct:__anon27
first	include/sieve/ALE_containers.hh	/^    X first;$/;"	m	struct:ALE::singleton
first	include/sieve/ALE_containers.hh	/^    first_type  first;$/;"	m	class:ALE::Pair
firstEdge	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^  ALE::Mesh::point_type firstEdge;    \/\/a HACK to name the edge something that most definitely isn't a point name.$/;"	m	struct:ALE::Hierarchy::bound_trav
firstEdge	src/dm/impls/mesh/examples/tutorials/id_bound.h	/^  ALE::Mesh::point_type firstEdge;      \/\/a HACK to name the edge something that most definitely isn't a point name.$/;"	m	struct:ALE::Coarsener::bound_trav
first_type	include/sieve/ALE_containers.hh	/^    typedef FirstType  first_type;$/;"	t	class:ALE::Pair
first_type	include/sieve/Overlap.hh	/^  typedef FirstType  first_type;$/;"	t	class:PETSc::DualSequence
fixConf	config/install.py	/^  def fixConf(self):$/;"	m	class:Installer
fixConfFile	config/install.py	/^  def fixConfFile(self, src):$/;"	m	class:Installer
flag	include/petsc-private/pcimpl.h	/^  MatStructure   flag;$/;"	m	struct:_p_PC
flags	config/BuildSystem/config/compile/C.py	/^  flags = property(getFlags, config.compile.processor.Processor.setFlags, doc = 'The flags for the executable')$/;"	v	class:DynamicLinker
flags	config/BuildSystem/config/compile/C.py	/^  flags = property(getFlags, config.compile.processor.Processor.setFlags, doc = 'The flags for the executable')$/;"	v	class:Linker
flags	config/BuildSystem/config/compile/C.py	/^  flags = property(getFlags, config.compile.processor.Processor.setFlags, doc = 'The flags for the executable')$/;"	v	class:SharedLinker
flags	config/BuildSystem/config/compile/C.py	/^  flags = property(getFlags, config.compile.processor.Processor.setFlags, doc = 'The flags for the static library')$/;"	v	class:StaticLinker
flags	config/BuildSystem/config/compile/Cxx.py	/^  flags = property(getFlags, config.compile.processor.Processor.setFlags, doc = 'The flags for the executable')$/;"	v	class:Linker
flags	config/BuildSystem/config/compile/Cxx.py	/^  flags = property(getFlags, config.compile.processor.Processor.setFlags, doc = 'The flags for the executable')$/;"	v	class:SharedLinker
flags	config/BuildSystem/config/compile/FC.py	/^  flags = property(getFlags, config.compile.processor.Processor.setFlags, doc = 'The flags for the executable')$/;"	v	class:Linker
flags	config/BuildSystem/config/compile/processor.py	/^  flags = property(getFlags, setFlags, doc = 'The flags for the executable')$/;"	v	class:Processor
flexPoints	include/sieve/Overlap.hh	/^  std::map<rank_type, std::vector<point_type> > flexPoints;$/;"	m	class:PETSc::Overlap
flexRanks	include/sieve/Overlap.hh	/^  std::vector<rank_type> flexRanks;$/;"	m	class:PETSc::Overlap
flexRemotePoints	include/sieve/Overlap.hh	/^  std::map<rank_type, std::vector<point_type> > flexRemotePoints;$/;"	m	class:PETSc::Overlap
flg_v	include/petsc-private/matimpl.h	/^  PetscMPIInt   *flg_v;                 \/* indicates what messages have arrived so far and from whom *\/$/;"	m	struct:__anon1
flip	include/sieve/ALE_containers.hh	/^    struct flip {$/;"	s	struct:ALE::Arrow
flip	include/sieve/ISieve.hh	/^    struct flip {$/;"	s	struct:ALE::SimpleArrow
flip	include/sieve/LabelSifter.hh	/^      struct flip {$/;"	s	struct:ALE::NewSifterDef::Arrow
flip	include/sieve/Sifter.hh	/^      struct flip {$/;"	s	struct:ALE::SifterDef::Arrow
flips	src/dm/impls/mesh/examples/tutorials/mesh_surgery.cxx	/^  PetscInt flips;$/;"	m	struct:__anon2	file:
flist	include/petscoptions.h	/^  PetscFunctionList flist;         \/* used for available values for PetscOptionsList() *\/$/;"	m	struct:_n_PetscOptions
flops	include/petsc-private/logimpl.h	/^  PetscLogDouble flops;         \/* The cumlative flops *\/$/;"	m	struct:_Action
flops	include/petsc-private/petscimpl.h	/^  PetscLogDouble       flops,time,mem;$/;"	m	struct:_p_PetscObject
flops	include/petsclog.h	/^  PetscLogDouble flops, flops2,flopsTmp; \/* The flops and flops^2 used in this event *\/$/;"	m	struct:__anon65
flops2	include/petsclog.h	/^  PetscLogDouble flops, flops2,flopsTmp; \/* The flops and flops^2 used in this event *\/$/;"	m	struct:__anon65
flopsTmp	include/petsclog.h	/^  PetscLogDouble flops, flops2,flopsTmp; \/* The flops and flops^2 used in this event *\/$/;"	m	struct:__anon65
flush	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*flush)(PetscDraw);$/;"	m	struct:_PetscDrawOps
flush	include/petsc-private/viewerimpl.h	/^   PetscErrorCode (*flush)(PetscViewer);$/;"	m	struct:_PetscViewerOps
fnorm	include/petsc-private/linesearchimpl.h	/^  PetscReal           fnorm;$/;"	m	struct:_p_LineSearch
for	config/BuildSystem/RDict.py	/^  import build.buildGraph # This is necessary for us to create BuildGraph objects on load$/;"	i
for	config/BuildSystem/RDict.py	/^  import project          # This is necessary for us to create Project objects on load$/;"	i
forcedP1_phi	src/dm/impls/mesh/examples/tutorials/ex_interpolate_1.c	/^void forcedP1_phi(double * w, int dim, double * v) \/\/assume that v is within the reference element and we want to get the coefficients for it.$/;"	f
forcing	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*forcing)(TS,PetscReal,Vec,void*);$/;"	m	struct:_DMTSOps
forcingctx	include/petsc-private/tsimpl.h	/^  void *forcingctx;$/;"	m	struct:_p_DMTS
formGNUConfigureArgs	config/BuildSystem/config/package.py	/^  def formGNUConfigureArgs(self):$/;"	m	class:GNUPackage
formGNUConfigureDepArgs	config/BuildSystem/config/package.py	/^  def formGNUConfigureDepArgs(self):$/;"	m	class:GNUPackage
formGNUConfigureExtraArgs	config/BuildSystem/config/package.py	/^  def formGNUConfigureExtraArgs(self):$/;"	m	class:GNUPackage
formGNUConfigureExtraArgs	config/BuildSystem/config/packages/netcdf-cxx.py	/^  def formGNUConfigureExtraArgs(self):$/;"	m	class:Configure
formGNUConfigureExtraArgs	config/BuildSystem/config/packages/netcdf.py	/^  def formGNUConfigureExtraArgs(self):$/;"	m	class:Configure
format	include/petsc-private/viewerimpl.h	/^  PetscViewerFormat format,formats[10];$/;"	m	struct:_p_PetscViewer
formats	include/petsc-private/viewerimpl.h	/^  PetscViewerFormat format,formats[10];$/;"	m	struct:_p_PetscViewer
formatter_class	config/builder2.py	/^                                   formatter_class = argparse.ArgumentDefaultsHelpFormatter)$/;"	v
fortran_func_pointers	include/petsc-private/kspimpl.h	/^  void (*fortran_func_pointers[3])(void); \/* Store our own function pointers so they are associated with the DMKSP instead of the DM *\/$/;"	m	struct:_p_DMKSP
fortran_func_pointers	include/petsc-private/petscimpl.h	/^  void                 (**fortran_func_pointers)(void);                  \/* used by Fortran interface functions to stash user provided Fortran functions *\/$/;"	m	struct:_p_PetscObject
fortrancallback	include/petsc-private/petscimpl.h	/^  PetscFortranCallback *fortrancallback[PETSC_FORTRAN_CALLBACK_MAXTYPE];$/;"	m	struct:_p_PetscObject
fortranmaxpy2_	include/petsc-private/kernels/petscaxpy.h	20;"	d
fortranmaxpy2_	include/petsc-private/kernels/petscaxpy.h	24;"	d
fortranmaxpy3_	include/petsc-private/kernels/petscaxpy.h	19;"	d
fortranmaxpy3_	include/petsc-private/kernels/petscaxpy.h	23;"	d
fortranmaxpy4_	include/petsc-private/kernels/petscaxpy.h	18;"	d
fortranmaxpy4_	include/petsc-private/kernels/petscaxpy.h	22;"	d
forwardsolve	include/petsc-private/matimpl.h	/^  PetscErrorCode (*forwardsolve)(Mat,Vec,Vec);$/;"	m	struct:_MatOps
found	config/BuildSystem/config/packages/PETSc.py	/^  found = property(getFound, doc = 'Did we find a valid PETSc installation')$/;"	v	class:Configure
found	config/PETSc/petsc.py	/^  found = property(getFound, doc = 'Did we find a valid PETSc installation')$/;"	v	class:Configure
framework	config/BuildSystem/build/framework.py	/^    import config.framework$/;"	i
framework	config/BuildSystem/config/compile/C.py	/^import config.framework$/;"	i
framework	config/BuildSystem/config/compile/CUDA.py	/^import config.framework$/;"	i
framework	config/BuildSystem/config/compile/Cxx.py	/^import config.framework$/;"	i
framework	config/BuildSystem/config/compile/FC.py	/^import config.framework$/;"	i
framework	config/BuildSystem/config/packages/BlasLapack.py	/^  framework = config.framework.Framework(sys.argv[1:])$/;"	v
framework	config/BuildSystem/config/packages/BlasLapack.py	/^  import config.framework$/;"	i
framework	config/BuildSystem/config/packages/MPI.py	/^  framework = config.framework.Framework(sys.argv[1:])$/;"	v	class:Configure
framework	config/BuildSystem/config/packages/MPI.py	/^  import config.framework$/;"	i
framework	config/BuildSystem/config/packages/PETSc.py	/^  framework = config.framework.Framework(sys.argv[1:])$/;"	v
framework	config/BuildSystem/config/packages/PETSc.py	/^  import config.framework$/;"	i
framework	config/BuildSystem/config/regression/frameworkTest.py	/^    import config.framework$/;"	i
framework	config/BuildSystem/maker.py	/^      import config.framework$/;"	i
framework	config/PETSc/petsc.py	/^  framework = config.framework.Framework(sys.argv[1:])$/;"	v
framework	config/PETSc/petsc.py	/^  import config.framework$/;"	i
framework	config/configure.py	/^  import config.framework$/;"	i
freeOnly	include/sieve/ISieve.hh	/^      bool           freeOnly;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
freelist	include/petsc-private/bagimpl.h	/^  PetscBool     freelist;$/;"	m	struct:_n_PetscBagItem
from_n	include/petsc-private/vecimpl.h	/^  PetscInt       to_n,from_n;$/;"	m	struct:_p_VecScatter
fromdata	include/petsc-private/vecimpl.h	/^  void           *fromdata,*todata;$/;"	m	struct:_p_VecScatter
fromfile	config/BuildSystem/patch.py	/^def fromfile(filename):$/;"	f
fromstring	config/BuildSystem/patch.py	/^def fromstring(s):$/;"	f
fromurl	config/BuildSystem/patch.py	/^def fromurl(url):$/;"	f
fset	include/petsc-private/matimpl.h	/^  PetscBool      fset;             \/* indicates that the initial function value F(X) is set *\/$/;"	m	struct:_p_MatFDColoring
ftn_func_cntx	include/petsc-private/matimpl.h	/^  void           *ftn_func_pointer,*ftn_func_cntx; \/* serve the same purpose as *fortran_func_pointers in PETSc objects *\/$/;"	m	struct:_p_MatFDColoring
ftn_func_pointer	include/petsc-private/matimpl.h	/^  void           *ftn_func_pointer,*ftn_func_cntx; \/* serve the same purpose as *fortran_func_pointers in PETSc objects *\/$/;"	m	struct:_p_MatFDColoring
ftpRetrieve	config/BuildSystem/retrieval.py	/^  def ftpRetrieve(self, url, root, name,force):$/;"	m	class:Retriever
ftp_object	bin/urlget.py	/^class ftp_object(url_object):$/;"	c
ftplib	bin/adiforfix.py	/^import ftplib$/;"	i
ftplib	bin/urlget.py	/^import ftplib$/;"	i
func	config/builder.py	/^   def func():$/;"	f	function:PETScMaker.compileFortranParallel
func	include/petsc-private/petscimpl.h	/^  void (*func)(void);$/;"	m	struct:__anon13
function	include/petscerror.h	/^  const char      *function[PETSCSTACKSIZE];$/;"	m	struct:__anon13
function	include/sieve/UFC.hh	/^  PetscScalar (*function)(const double * coords);$/;"	m	class:function_wrapper_scalar
function	src/dm/impls/mesh/examples/tests/unitTests.cxx	/^  PetscBool  function;      \/\/ Run the functionality tests$/;"	m	struct:__anon23	file:
function_calling_dict	bin/pythonscripts/PetscStaticFunctionCandidates.py	/^function_calling_dict = defaultdict(set);  # Dictionary which records all calls to a function$/;"	v
function_dict	bin/pythonscripts/PetscStaticFunctionCandidates.py	/^function_dict = defaultdict(set);$/;"	v
function_type	include/sieve/Mesh.hh	/^    typedef double (*function_type)(const PetscReal []);$/;"	t	class:ALE::BoundaryCondition
function_wrapper_scalar	include/sieve/UFC.hh	/^class function_wrapper_scalar : public ufc::function {$/;"	c
functional	config/PETSc/FEM.py	/^    import FIAT.functional$/;"	i
functionctx	include/petsc-private/snesimpl.h	/^  void *functionctx;$/;"	m	struct:_p_DMSNES
functionname	include/petsc-private/petscfptimpl.h	/^  char     **functionname;$/;"	m	struct:_n_PetscFPT
functionpointer	include/petsc-private/petscfptimpl.h	/^  void     **functionpointer;$/;"	m	struct:_n_PetscFPT
functools	bin/pythonscripts/PetscBinaryIO.py	/^import functools$/;"	i
fuse	include/sieve/INumbering.hh	/^    static void fuse(const Obj<OverlapSection>& overlapSection, const Obj<RecvOverlap>& recvOverlap, const Obj<order_type>& order) {$/;"	f	class:ALE::INumberingFactory
fuse	include/sieve/ParallelMapping.hh	/^      static void fuse(const Obj<OverlapSection>& overlapSection, const Obj<RecvOverlap>& recvOverlap, Renumbering& renumbering, const Obj<IFSieve<Point> >& sieve) {$/;"	f	class:ALE::Pullback::InsertionBinaryFusion
fuse	include/sieve/ParallelMapping.hh	/^      static void fuse(const Obj<OverlapSection>& overlapSection, const Obj<RecvOverlap>& recvOverlap, Renumbering& renumbering, const Obj<Sieve<Point,Point,int> >& sieve) {$/;"	f	class:ALE::Pullback::InsertionBinaryFusion
fuse	include/sieve/ParallelMapping.hh	/^      static void fuse(const Obj<OverlapSection>& overlapSection, const Obj<RecvOverlap>& recvOverlap, const Obj<IFSieve<Point> >& sieve) {$/;"	f	class:ALE::Pullback::InsertionBinaryFusion
fuse	include/sieve/ParallelMapping.hh	/^      static void fuse(const Obj<OverlapSection>& overlapSection, const Obj<RecvOverlap>& recvOverlap, const Obj<Section>& section) {$/;"	f	class:ALE::Pullback::AdditiveBinaryFusion
fuse	include/sieve/ParallelMapping.hh	/^      static void fuse(const Obj<OverlapSection>& overlapSection, const Obj<RecvOverlap>& recvOverlap, const Obj<Section>& section) {$/;"	f	class:ALE::Pullback::InsertionBinaryFusion
fuse	include/sieve/ParallelMapping.hh	/^      static void fuse(const Obj<OverlapSection>& overlapSection, const Obj<RecvOverlap>& recvOverlap, const Obj<Section>& section) {$/;"	f	class:ALE::Pullback::InterpolateMultipleFusion
fuse	include/sieve/ParallelMapping.hh	/^      static void fuse(const Obj<OverlapSection>& overlapSection, const Obj<RecvOverlap>& recvOverlap, const Obj<Section>& section) {$/;"	f	class:ALE::Pullback::ReplacementBinaryFusion
fuse	include/sieve/ParallelMapping.hh	/^      static void fuse(const Obj<OverlapSection>& overlapSection, const Obj<RecvOverlap>& recvOverlap, const Obj<Section>& section, Function binaryOp) {$/;"	f	class:ALE::Pullback::BinaryFusion
fuse	include/sieve/ParallelMapping.hh	/^      static void fuse(const Obj<OverlapSection>& overlapSection, const Obj<RecvOverlap>& recvOverlap, const Obj<Section>& section, const Obj<Bundle>& bundle) {$/;"	f	class:ALE::Pullback::InsertionBinaryFusion
fuse	include/sieve/ParallelMapping.hh	/^      static void fuse(const Obj<OverlapSection>& overlapSection, const Obj<RecvOverlap>& recvOverlap, const Obj<UniformSection<MinimalArrow<int,int>,int> >& section) {$/;"	f	class:ALE::Pullback::InsertionBinaryFusion
fuseNumbering	include/sieve/INumbering.hh	/^    static void fuseNumbering(const Obj<OverlapSection>& overlapSection, const Obj<RecvOverlap>& recvOverlap, const Obj<numbering_type>& numbering) {$/;"	f	class:ALE::INumberingFactory
g0Funcs	include/petscdm.h	/^  void (**g0Funcs)(const PetscScalar[], const PetscScalar[], const PetscReal[], PetscScalar[]); \/* The g_0 functions for each field pair *\/$/;"	m	struct:__anon20
g1Funcs	include/petscdm.h	/^  void (**g1Funcs)(const PetscScalar[], const PetscScalar[], const PetscReal[], PetscScalar[]); \/* The g_1 functions for each field pair *\/$/;"	m	struct:__anon20
g2Funcs	include/petscdm.h	/^  void (**g2Funcs)(const PetscScalar[], const PetscScalar[], const PetscReal[], PetscScalar[]); \/* The g_2 functions for each field pair *\/$/;"	m	struct:__anon20
g3Funcs	include/petscdm.h	/^  void (**g3Funcs)(const PetscScalar[], const PetscScalar[], const PetscReal[], PetscScalar[]); \/* The g_3 functions for each field pair *\/$/;"	m	struct:__anon20
gamma	include/petsc-private/snesimpl.h	/^  PetscReal gamma;               \/* mult. factor for version 2 rtol computation *\/$/;"	m	struct:__anon5
gc	config/BuildSystem/build/fileState.py	/^      import gc$/;"	i
gc	config/BuildSystem/build/framework.py	/^      import gc$/;"	i
generate	src/dm/impls/mesh/examples/tutorials/ex_coarsen.c	/^  PetscBool generate;            \/\/ Generate the mesh rather than reading it in$/;"	m	struct:__anon7	file:
generate	src/dm/impls/mesh/examples/tutorials/ex_coarsen_3.c	/^  PetscBool generate;            \/\/ Generate the mesh rather than reading it in$/;"	m	struct:__anon1	file:
generate	src/dm/impls/mesh/examples/tutorials/mesh_surgery.cxx	/^  PetscBool  generate;$/;"	m	struct:__anon2	file:
generateArchiverGuesses	config/BuildSystem/config/setCompilers.py	/^  def generateArchiverGuesses(self):$/;"	m	class:Configure
generateCCompilerGuesses	config/BuildSystem/config/setCompilers.py	/^  def generateCCompilerGuesses(self):$/;"	m	class:Configure
generateCPreprocessorGuesses	config/BuildSystem/config/setCompilers.py	/^  def generateCPreprocessorGuesses(self):$/;"	m	class:Configure
generateCUDACompilerGuesses	config/BuildSystem/config/setCompilers.py	/^  def generateCUDACompilerGuesses(self):$/;"	m	class:Configure
generateCUDAPreprocessorGuesses	config/BuildSystem/config/setCompilers.py	/^  def generateCUDAPreprocessorGuesses(self):$/;"	m	class:Configure
generateCxxCompilerGuesses	config/BuildSystem/config/setCompilers.py	/^  def generateCxxCompilerGuesses(self):$/;"	m	class:Configure
generateCxxPreprocessorGuesses	config/BuildSystem/config/setCompilers.py	/^  def generateCxxPreprocessorGuesses(self):$/;"	m	class:Configure
generateDynamicLinkerGuesses	config/BuildSystem/config/setCompilers.py	/^  def generateDynamicLinkerGuesses(self):$/;"	m	class:Configure
generateFortranCompilerGuesses	config/BuildSystem/config/setCompilers.py	/^  def generateFortranCompilerGuesses(self):$/;"	m	class:Configure
generateGuesses	config/BuildSystem/config/package.py	/^  def generateGuesses(self):$/;"	m	class:Package
generateGuesses	config/BuildSystem/config/packages/BlasLapack.py	/^  def generateGuesses(self):$/;"	m	class:Configure
generateGuesses	config/PETSc/packages/Matlab.py	/^  def generateGuesses(self):$/;"	m	class:Configure
generateLibList	config/BuildSystem/config/package.py	/^  def generateLibList(self, directory):$/;"	m	class:Package
generateLibList	config/PETSc/packages/hypre.py	/^  def generateLibList(self,dir):$/;"	m	class:Configure
generateLibList	config/PETSc/packages/ml.py	/^  def generateLibList(self,dir):$/;"	m	class:Configure
generateMesh	include/sieve/Generator.hh	/^      static Obj<Mesh> generateMesh(const Obj<Mesh>& boundary, const bool interpolate = false, const bool constrained = false) {$/;"	f	class:ALE::TetGen::Generator
generateMesh	include/sieve/Generator.hh	/^      static Obj<Mesh> generateMesh(const Obj<Mesh>& boundary, const bool interpolate = false, const bool constrained = false) {$/;"	f	class:ALE::Triangle::Generator
generateMesh	include/sieve/Generator.hh	/^    static Obj<Mesh> generateMesh(const Obj<Mesh>& boundary, const bool interpolate = false, const bool constrained = false) {$/;"	f	class:ALE::Generator
generateMeshV	include/sieve/Generator.hh	/^      static Obj<Mesh> generateMeshV(const Obj<Mesh>& boundary, const bool interpolate = false, const bool constrained = false, const bool renumber = false) {$/;"	f	class:ALE::TetGen::Generator
generateMeshV	include/sieve/Generator.hh	/^      static Obj<Mesh> generateMeshV(const Obj<Mesh>& boundary, const bool interpolate = false, const bool constrained = false, const bool renumber = false) {$/;"	f	class:ALE::Triangle::Generator
generateMeshV	include/sieve/Generator.hh	/^    static Obj<Mesh> generateMeshV(const Obj<Mesh>& boundary, const bool interpolate = false, const bool constrained = false, const bool renumber = false) {$/;"	f	class:ALE::Generator
generateSharedLinkerGuesses	config/BuildSystem/config/setCompilers.py	/^  def generateSharedLinkerGuesses(self):$/;"	m	class:Configure
generatefortranstubs	config/PETSc/packages/sowing.py	/^          import generatefortranstubs$/;"	i
generator	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^generator  = PETSc.FEM.QuadratureGenerator()$/;"	v
generator	bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py	/^generator  = PETSc.FEM.QuadratureGenerator()$/;"	v
generators	config/BuildSystem/build/buildGraph.py	/^from __future__ import generators$/;"	i
generators	config/BuildSystem/build/builder.py	/^from __future__ import generators$/;"	i
generators	config/BuildSystem/build/processor.py	/^from __future__ import generators$/;"	i
generators	config/BuildSystem/config/package.py	/^from __future__ import generators$/;"	i
generators	config/BuildSystem/config/packages/BlasLapack.py	/^from __future__ import generators$/;"	i
generators	config/BuildSystem/config/packages/CHOLMOD.py	/^from __future__ import generators$/;"	i
generators	config/BuildSystem/config/packages/MPI.py	/^from __future__ import generators$/;"	i
generators	config/BuildSystem/config/packages/PETSc.py	/^from __future__ import generators$/;"	i
generators	config/BuildSystem/config/packages/UMFPACK.py	/^from __future__ import generators$/;"	i
generators	config/BuildSystem/config/packages/boost.py	/^from __future__ import generators$/;"	i
generators	config/BuildSystem/config/packages/cusp.py	/^from __future__ import generators$/;"	i
generators	config/BuildSystem/config/packages/thrust.py	/^from __future__ import generators$/;"	i
generators	config/BuildSystem/config/setCompilers.py	/^from __future__ import generators$/;"	i
generators	config/BuildSystem/config/setsBackport.py	/^from __future__ import generators$/;"	i
generators	config/BuildSystem/config/setsOrdered.py	/^from __future__ import generators$/;"	i
generators	config/BuildSystem/graph.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/package.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/packages/Matlab.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/packages/MatlabEngine.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/packages/txpetscgpu.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/petsc.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/utilities/CHUD.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/utilities/Etags.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/utilities/FPTrap.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/utilities/Regression.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/utilities/bmakeDir.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/utilities/dataFilesPath.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/utilities/debuggers.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/utilities/fortranCPP.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/utilities/fortranCommandLine.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/utilities/getResidentSetSize.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/utilities/languages.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/utilities/libraryOptions.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/utilities/memAlign.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/utilities/missing.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/utilities/scalarTypes.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/utilities/sharedLibraries.py	/^from __future__ import generators$/;"	i
generators	config/PETSc/utilities/timer.py	/^from __future__ import generators$/;"	i
genericRetrieve	config/BuildSystem/retrieval.py	/^  def genericRetrieve(self, url, root, name):$/;"	m	class:Retriever
get	config/BuildSystem/RDict.py	/^  def get(self, key, default=None):$/;"	m	class:RDict
getAcCCFD	config/BuildSystem/config/autoconf.py	/^  def getAcCCFD(self):$/;"	m	class:Configure
getActionFlags	config/BuildSystem/build/compile/SIDL.py	/^  def getActionFlags(self, source):$/;"	m	class:Compiler
getAggregateBasisStructs	config/PETSc/FEM.py	/^  def getAggregateBasisStructs(self, elements):$/;"	m	class:QuadratureGenerator
getAllocationTotal	include/sieve/ALE_mem.hh	/^    long long getAllocationTotal() {return getAllocationTotal(stageNames.front());};$/;"	f	class:ALE::MemoryLogger
getAllocationTotal	include/sieve/ALE_mem.hh	/^    long long getAllocationTotal(const std::string& stage) {return stages[stage].first.total;};$/;"	f	class:ALE::MemoryLogger
getArch	config/BuildSystem/config/package.py	/^  def getArch(self):$/;"	m	class:Package
getArch	config/BuildSystem/config/packages/PETSc.py	/^  def getArch(self):$/;"	m	class:Configure
getArch	config/PETSc/petsc.py	/^  def getArch(self):$/;"	m	class:Configure
getArchiverFlags	config/BuildSystem/config/setCompilers.py	/^  def getArchiverFlags(self, archiver):$/;"	m	class:Configure
getArgDB	config/BuildSystem/args.py	/^  def getArgDB(self):$/;"	m	class:ArgumentProcessor
getArgName	config/BuildSystem/help.py	/^  def getArgName(self, name):$/;"	m	class:Help
getArray	config/PETSc/FEM.py	/^  def getArray(self, name, values, comment = None, typeName = 'double', static = True, packSize = 1):$/;"	m	class:QuadratureGenerator
getArrowSection	include/sieve/CartesianSieve.hh	/^    const Obj<arrow_section_type>& getArrowSection(const std::string& name) {$/;"	f	class:ALE::CartesianBundle
getArrowSection	include/sieve/Mesh.hh	/^    const Obj<arrow_section_type>& getArrowSection(const std::string& name) {$/;"	f	class:ALE::Bundle
getArrowSection	include/sieve/Mesh.hh	/^    const Obj<arrow_section_type>& getArrowSection(const std::string& name) {$/;"	f	class:ALE::IBundle
getArrowSections	include/sieve/CartesianSieve.hh	/^    Obj<std::set<std::string> > getArrowSections() const {$/;"	f	class:ALE::CartesianBundle
getArrowSections	include/sieve/Mesh.hh	/^    Obj<std::set<std::string> > getArrowSections() const {$/;"	f	class:ALE::Bundle
getArrowSections	include/sieve/Mesh.hh	/^    Obj<std::set<std::string> > getArrowSections() const {$/;"	f	class:ALE::IBundle
getArrows	include/sieve/ISieve.hh	/^      const point_type          *getArrows() const {return this->arrows;}$/;"	f	class:ALE::ISieveVisitor::ArrowRetriever
getAtlas	include/sieve/Field.hh	/^    const Obj<atlas_type>& getAtlas() const {return this->_atlas;};$/;"	f	class:ALE::FEMSection
getAtlas	include/sieve/Field.hh	/^    const Obj<atlas_type>& getAtlas() const {return this->_atlas;};$/;"	f	class:ALE::GeneralSection
getAtlas	include/sieve/Field.hh	/^    const Obj<atlas_type>& getAtlas() {return this->_atlas;}$/;"	f	class:ALE::NewUniformSection
getAtlas	include/sieve/Field.hh	/^    const Obj<atlas_type>& getAtlas() {return this->_atlas;};$/;"	f	class:ALE::Section
getAtlas	include/sieve/Field.hh	/^    const Obj<atlas_type>& getAtlas() {return this->_atlas;};$/;"	f	class:ALE::UniformSection
getAtlas	include/sieve/IField.hh	/^    const Obj<atlas_type>& getAtlas() const {return this->_atlas;};$/;"	f	class:ALE::IUniformSection
getAtlas	include/sieve/Sections.hh	/^    const Obj<atlas_type>& getAtlas() {return this->_atlas;};$/;"	f	class:ALE::ConeSection
getAtlas	include/sieve/Sections.hh	/^    const Obj<atlas_type>& getAtlas() {return this->_atlas;};$/;"	f	class:ALE::ConeSectionV
getAtlas	include/sieve/Sections.hh	/^    const Obj<atlas_type>& getAtlas() {return this->_atlas;};$/;"	f	class:ALE::ConeSizeSection
getAtlas	include/sieve/Sections.hh	/^    const Obj<atlas_type>& getAtlas() {return this->_atlas;};$/;"	f	class:ALE::ConeSizeSectionV
getAtlas	include/sieve/Sections.hh	/^    const Obj<atlas_type>& getAtlas() {return this->_atlas;};$/;"	f	class:ALE::LabelSection
getAtlas	include/sieve/Sections.hh	/^    const Obj<atlas_type>& getAtlas() {return this->_atlas;};$/;"	f	class:ALE::OrientedConeSectionV
getAuthorizedUrl	config/BuildSystem/retrieval.py	/^  def getAuthorizedUrl(self, url):$/;"	m	class:Retriever
getBC	include/sieve/Field.hh	/^    const Obj<bc_type>& getBC() const {return this->_bc;};$/;"	f	class:ALE::FEMSection
getBC	include/sieve/Field.hh	/^    const Obj<bc_type>& getBC() const {return this->_bc;};$/;"	f	class:ALE::GeneralSection
getBCs	include/sieve/Field.hh	/^    const std::vector<Obj<bc_type> >& getBCs() {return this->_bcs;};$/;"	f	class:ALE::FEMSection
getBCs	include/sieve/Field.hh	/^    const std::vector<Obj<bc_type> >& getBCs() {return this->_bcs;};$/;"	f	class:ALE::GeneralSection
getBKParentURL	config/BuildSystem/retrieval.py	/^  def getBKParentURL(self, root):$/;"	f
getBaseSize	include/sieve/ISieve.hh	/^    index_type getBaseSize() const {$/;"	f	class:ALE::IFSieve
getBaseSize	include/sieve/LabelSifter.hh	/^    int getBaseSize() const {$/;"	f	class:ALE::LabelSifter
getBaseSize	include/sieve/Sifter.hh	/^    int getBaseSize() {return this->base()->size();};$/;"	f	class:ALE::ASifter
getBasis	include/sieve/Mesh.hh	/^    const PetscReal *getBasis() {return this->_basis;};$/;"	f	class:ALE::Discretization
getBasisDerivatives	include/sieve/Mesh.hh	/^    const PetscReal *getBasisDerivatives() {return this->_basisDer;};$/;"	f	class:ALE::Discretization
getBasisFuncOrder	config/PETSc/FEM.py	/^  def getBasisFuncOrder(self, element):$/;"	m	class:QuadratureGenerator
getBasisSize	include/sieve/FEMProblem.hh	/^      virtual const int     getBasisSize() {return this->_basisSize;};$/;"	f	class:ALE::Problem::GeneralDiscretization
getBasisSize	include/sieve/Mesh.hh	/^    int           getBasisSize() {return this->_basisSize;};$/;"	f	class:ALE::Discretization
getBasisStructs	config/PETSc/FEM.py	/^  def getBasisStructs(self, name, element, quadrature, num, tensor = 0):$/;"	m	class:QuadratureGenerator
getBasisStructsInline	config/PETSc/FEM.py	/^  def getBasisStructsInline(self, name, element, quadrature, num, tensor = 0):$/;"	m	class:QuadratureGenerator
getBootstrap	config/BuildSystem/regression/buildtest.py	/^  def getBootstrap(self):$/;"	m	class:RemoteBuild
getBoundaryCondition	include/sieve/CartesianSieve.hh	/^    const Obj<BoundaryCondition>& getBoundaryCondition() {return this->_boundaryCondition;};$/;"	f	class:ALE::CartesianMesh
getBoundaryCondition	include/sieve/FEMProblem.hh	/^      virtual Obj<GeneralBoundaryCondition> getBoundaryCondition() {return this->getBoundaryCondition("default");};$/;"	f	class:ALE::Problem::GeneralDiscretization
getBoundaryCondition	include/sieve/FEMProblem.hh	/^      virtual Obj<GeneralBoundaryCondition> getBoundaryCondition(const std::string& name) {return this->_boundaryConditions[name];};$/;"	f	class:ALE::Problem::GeneralDiscretization
getBoundaryCondition	include/sieve/Mesh.hh	/^    const Obj<BoundaryCondition>& getBoundaryCondition() {return this->getBoundaryCondition("default");};$/;"	f	class:ALE::Discretization
getBoundaryCondition	include/sieve/Mesh.hh	/^    const Obj<BoundaryCondition>& getBoundaryCondition(const std::string& name) {return this->_boundaryConditions[name];};$/;"	f	class:ALE::Discretization
getBoundaryConditions	include/sieve/FEMProblem.hh	/^      virtual names_type getBoundaryConditions() const {$/;"	f	class:ALE::Problem::GeneralDiscretization
getBoundaryConditions	include/sieve/Mesh.hh	/^    Obj<std::set<std::string> > getBoundaryConditions() const {$/;"	f	class:ALE::Discretization
getCFlags	config/BuildSystem/config/compilerOptions.py	/^  def getCFlags(self, compiler, bopt):$/;"	m	class:CompilerOptions
getCalculatedOverlap	include/sieve/Mesh.hh	/^    bool getCalculatedOverlap() const {return this->_calculatedOverlap;};$/;"	f	class:ALE::Bundle
getCalculatedOverlap	include/sieve/Mesh.hh	/^    bool getCalculatedOverlap() const {return this->_calculatedOverlap;};$/;"	f	class:ALE::IMesh
getCapSize	include/sieve/ISieve.hh	/^    index_type getCapSize() const {$/;"	f	class:ALE::IFSieve
getCapSize	include/sieve/LabelSifter.hh	/^    int getCapSize() const {$/;"	f	class:ALE::LabelSifter
getCapSize	include/sieve/Sifter.hh	/^    int getCapSize() {return this->cap()->size();};$/;"	f	class:ALE::ASifter
getCell	include/sieve/Partitioner.hh	/^      point_type getCell(const point_type cellNumber) const {$/;"	f	class:ALE::Partitioner::MeshManager
getCell	include/sieve/UFCProblem.hh	/^      ufc::cell * getCell() {$/;"	f	class:ALE::Problem::UFCBoundaryCondition
getCell	include/sieve/UFCProblem.hh	/^      ufc::cell * getCell() {$/;"	f	class:ALE::Problem::UFCFormSubProblem
getCell	include/sieve/UFCProblem.hh	/^      ufc::cell * getCell() {return _cell;};$/;"	f	class:ALE::Problem::UFCDiscretization
getCell	include/sieve/UFCProblem.hh	/^      virtual ufc::cell * getCell() {$/;"	f	class:ALE::Problem::UFCCellIntegral
getCellNumbering	include/petscdmmesh_viewers.hh	/^  static Obj<typename Mesh::numbering_type> getCellNumbering(const Obj<Mesh>& mesh) {$/;"	f	class:VTKXMLViewer
getCellType	include/petscdmmesh_viewers.hh	/^  static int getCellType(const int dim, const int corners) {$/;"	f	class:VTKViewer
getCells	include/petscdmmesh_viewers.hh	/^  static Obj<typename Mesh::label_sequence> getCells(const Obj<Mesh>& mesh) {$/;"	f	class:VTKXMLViewer
getChangedFiles	config/BuildSystem/sourceControl.py	/^  def getChangedFiles(self, files):$/;"	m	class:BitKeeper
getChangedFiles	config/BuildSystem/sourceControl.py	/^  def getChangedFiles(self, files):$/;"	m	class:VersionControl
getChart	include/sieve/Field.hh	/^    const chart_type& getChart() const {return this->_atlas->getChart();};$/;"	f	class:ALE::FEMSection
getChart	include/sieve/Field.hh	/^    const chart_type& getChart() const {return this->_atlas->getChart();};$/;"	f	class:ALE::GeneralSection
getChart	include/sieve/Field.hh	/^    const chart_type& getChart() const {return this->_atlas->getChart();};$/;"	f	class:ALE::Section
getChart	include/sieve/Field.hh	/^    const chart_type& getChart() {return this->_atlas->getChart();};$/;"	f	class:ALE::Section
getChart	include/sieve/Field.hh	/^    const chart_type& getChart() {return this->_atlas->getChart();};$/;"	f	class:ALE::UniformSection
getChart	include/sieve/Field.hh	/^    const chart_type& getChart() {return this->_chart;}$/;"	f	class:ALE::NewUniformSection
getChart	include/sieve/Field.hh	/^    const chart_type& getChart() {return this->_chart;};$/;"	f	class:ALE::ConstantSection
getChart	include/sieve/IField.hh	/^    const chart_type& getChart() const {return this->_atlas->getChart();};$/;"	f	class:ALE::IUniformSection
getChart	include/sieve/IField.hh	/^    const chart_type& getChart() const {return this->_chart;};$/;"	f	class:ALE::IConstantSection
getChart	include/sieve/ISieve.hh	/^    const chart_type& getChart() const {return this->chart;};$/;"	f	class:ALE::IFSieve
getChart	include/sieve/LabelSifter.hh	/^    chart_type& getChart() {static chart_type chart(0, 0); return chart;}$/;"	f	class:ALE::LabelSifter
getChart	include/sieve/Sections.hh	/^      const chart_type& getChart() {return this->_domain;};$/;"	f	class:ALE::New::ConeSection
getChart	include/sieve/Sections.hh	/^      const chart_type& getChart() {return this->_domain;};$/;"	f	class:ALE::New::PartitionSection
getChart	include/sieve/Sections.hh	/^      const chart_type& getChart() {return this->_domain;};$/;"	f	class:ALE::New::SupportSection
getChart	include/sieve/Sections.hh	/^    const chart_type& getChart() const {$/;"	f	class:ALE::BaseSection
getChart	include/sieve/Sections.hh	/^    const chart_type& getChart() const {$/;"	f	class:ALE::LabelBaseSection
getChecksum	config/BuildSystem/config/package.py	/^  def getChecksum(self,source, chunkSize = 1024*1024):$/;"	m	class:Package
getChecksum	config/BuildSystem/sourceDatabase.py	/^  def getChecksum(source, chunkSize = 1024*1024):$/;"	m	class:SourceDB
getChecksum	config/BuildSystem/sourceDatabase.py	/^  getChecksum = staticmethod(getChecksum)$/;"	v	class:SourceDB
getChild	config/BuildSystem/config/framework.py	/^  def getChild(self, moduleName, keywordArgs = {}):$/;"	m	class:Framework
getClassName	include/sieve/ALE_containers.hh	/^    const std::string& getClassName() const {return this->_className;};$/;"	f	class:ALE::ParallelObject
getClassName	include/sieve/ALE_mem.hh	/^    static const char *getClassName() {$/;"	f	class:ALE::MemoryLogger
getClassName	include/sieve/ALE_mem.hh	/^  static const char *getClassName() {$/;"	f	namespace:ALE
getClassName	include/sieve/ALE_mem.hh	/^  static const char *getClassName(const T * \/* obj *\/) {$/;"	f	namespace:ALE
getClasses	config/BuildSystem/build/templates/usingSIDL.py	/^  def getClasses(self, package):$/;"	m	class:UsingSIDL
getClassesInFile	config/BuildSystem/build/templates/usingSIDL.py	/^  def getClassesInFile(path):$/;"	m	class:UsingSIDL
getClassesInFile	config/BuildSystem/build/templates/usingSIDL.py	/^  getClassesInFile = staticmethod(getClassesInFile)$/;"	v	class:UsingSIDL
getCleanup	config/BuildSystem/config/framework.py	/^  def getCleanup(self):$/;"	m	class:Framework
getClientCompileTarget	config/BuildSystem/build/templates/usingCxx.py	/^  def getClientCompileTarget(self):$/;"	m	class:UsingCxx
getClientCompileTarget	config/BuildSystem/build/templates/usingPython.py	/^  def getClientCompileTarget(self):$/;"	m	class:UsingPython
getClientLanguages	config/BuildSystem/maker.py	/^  def getClientLanguages(self):$/;"	m	class:SIDLMake
getClientRootDir	config/BuildSystem/build/templates/usingSIDL.py	/^  def getClientRootDir(self, lang, root = None):$/;"	m	class:UsingSIDL
getClientTarget	config/BuildSystem/build/templates/Compile.py	/^  def getClientTarget(self, lang, fullTarget = 0):$/;"	m	class:Template
getClientTarget	config/BuildSystem/build/templates/SIDL.py	/^  def getClientTarget(self, lang, fullTarget = 0, forceRebuild = 0):$/;"	m	class:Template
getClientTargets	config/BuildSystem/build/templates/Compile.py	/^  def getClientTargets(self):$/;"	m	class:Template
getClientTargets	config/BuildSystem/build/templates/SIDL.py	/^  def getClientTargets(self):$/;"	m	class:Template
getClosedFiles	config/BuildSystem/sourceControl.py	/^  def getClosedFiles(self, files):$/;"	m	class:BitKeeper
getClosedFiles	config/BuildSystem/sourceControl.py	/^  def getClosedFiles(self, files):$/;"	m	class:VersionControl
getCode	config/BuildSystem/config/base.py	/^  def getCode(self, includes, body = None, codeBegin = None, codeEnd = None):$/;"	m	class:Configure
getColor	include/sieve/Sifter.hh	/^    getColor(const typename traits::source_type& s, const typename traits::target_type& t, bool fail = true) {$/;"	f	class:ALE::Sifter
getCommand	config/BuildSystem/config/compile/C.py	/^  def getCommand(self, sourceFiles, outputFile = None):$/;"	m	class:Compiler
getCommand	config/BuildSystem/config/compile/C.py	/^  def getCommand(self, sourceFiles, outputFile):$/;"	m	class:StaticLinker
getCommand	config/BuildSystem/config/compile/CUDA.py	/^  def getCommand(self, sourceFiles, outputFile = None):$/;"	m	class:Compiler
getCommand	config/BuildSystem/config/compile/Cxx.py	/^  def getCommand(self, sourceFiles, outputFile = None):$/;"	m	class:Compiler
getCommand	config/BuildSystem/config/compile/processor.py	/^  def getCommand(self, sourceFiles, outputFile = None):$/;"	m	class:Processor
getCompileGraph	config/BuildSystem/build/framework.py	/^  def getCompileGraph(self):$/;"	m	class:Framework
getCompileSuffix	config/BuildSystem/build/templates/usingC.py	/^  def getCompileSuffix(self):$/;"	m	class:UsingC
getCompileSuffix	config/BuildSystem/build/templates/usingCxx.py	/^  def getCompileSuffix(self):$/;"	m	class:UsingCxx
getCompileTemplate	config/BuildSystem/build/framework.py	/^  def getCompileTemplate(self):$/;"	m	class:Framework
getCompiler	config/BuildSystem/config/base.py	/^  def getCompiler(self):$/;"	m	class:Configure
getCompilerCmd	config/BuildSystem/config/base.py	/^  def getCompilerCmd(self):$/;"	m	class:Configure
getCompilerDriver	config/BuildSystem/build/compile/SIDL.py	/^  def getCompilerDriver(self):$/;"	m	class:Compiler
getCompilerFlags	config/BuildSystem/config/base.py	/^  def getCompilerFlags(self):$/;"	m	class:Configure
getCompilerFlags	config/BuildSystem/config/compilerOptions.py	/^  def getCompilerFlags(self, language, compiler, bopt):$/;"	m	class:CompilerOptions
getCompilerFlagsArg	config/BuildSystem/config/base.py	/^  def getCompilerFlagsArg(self, compilerOnly = 0):$/;"	m	class:Configure
getCompilerFlagsName	config/BuildSystem/config/base.py	/^  def getCompilerFlagsName(self, language, compilerOnly = 0):$/;"	m	class:Configure
getCompilerModule	config/BuildSystem/build/compile/SIDL.py	/^  def getCompilerModule(self, name = 'scandal'):$/;"	m	class:Compiler
getCompilerObject	config/BuildSystem/build/templates/usingC.py	/^  def getCompilerObject(self, language):$/;"	m	class:UsingC
getCompilerObject	config/BuildSystem/build/templates/usingCxx.py	/^  def getCompilerObject(self, language):$/;"	m	class:UsingCxx
getCompilerObject	config/BuildSystem/script.py	/^  def getCompilerObject(self, language):$/;"	m	class:LanguageProcessor
getCompilerVersion	config/BuildSystem/config/compilerOptions.py	/^  def getCompilerVersion(self, language, compiler):$/;"	m	class:CompilerOptions
getCompilers	config/BuildSystem/script.py	/^  def getCompilers(self):$/;"	m	class:LanguageProcessor
getComputationLayoutStructs	config/PETSc/FEM.py	/^  def getComputationLayoutStructs(self, numBlocks):$/;"	m	class:QuadratureGenerator
getComputationTypes	config/PETSc/FEM.py	/^  def getComputationTypes(self, element, num):$/;"	m	class:QuadratureGenerator
getConeOffsets	include/sieve/ISieve.hh	/^    offsets_type      getConeOffsets() {return this->coneOffsets;};$/;"	f	class:ALE::IFSieve
getConeOrientations	include/sieve/ISieve.hh	/^    orientations_type getConeOrientations() {return this->coneOrientations;};$/;"	f	class:ALE::IFSieve
getConeSize	include/sieve/ISieve.hh	/^    index_type getConeSize(const point_type& p) const {$/;"	f	class:ALE::IFSieve
getConeSize	include/sieve/LabelSifter.hh	/^    int getConeSize(const typename traits::target_type& p) {$/;"	f	class:ALE::LabelSifter
getConeSize	include/sieve/Overlap.hh	/^  int getConeSize(rank_type rank) {$/;"	f	class:PETSc::SendOverlap
getConeSize	include/sieve/Overlap.hh	/^  int getConeSize(rank_type rank, point_type remotePoint) {$/;"	f	class:PETSc::SendOverlap
getConeSize	include/sieve/Sifter.hh	/^    int getConeSize(const typename traits::target_type& p) {$/;"	f	class:ALE::ASifter
getCones	include/sieve/ISieve.hh	/^    cones_type        getCones() {return this->cones;};$/;"	f	class:ALE::IFSieve
getConstrainedFiberDimension	include/sieve/Field.hh	/^    int getConstrainedFiberDimension(const point_type& p) const {$/;"	f	class:ALE::FEMSection
getConstrainedFiberDimension	include/sieve/Field.hh	/^    int getConstrainedFiberDimension(const point_type& p) const {$/;"	f	class:ALE::GeneralSection
getConstrainedFiberDimension	include/sieve/Field.hh	/^    int getConstrainedFiberDimension(const point_type& p) const {$/;"	f	class:ALE::Section
getConstrainedFiberDimension	include/sieve/Field.hh	/^    int getConstrainedFiberDimension(const point_type& p, const int space) const {$/;"	f	class:ALE::FEMSection
getConstrainedFiberDimension	include/sieve/Field.hh	/^    int getConstrainedFiberDimension(const point_type& p, const int space) const {$/;"	f	class:ALE::GeneralSection
getConstrainedIndices	include/sieve/ISieve.hh	/^      void getConstrainedIndices(const point_type& p, const int orientation) {$/;"	f	class:ALE::ISieveVisitor::IndicesVisitor
getConstraintDimension	include/sieve/Field.hh	/^    int getConstraintDimension(const point_type& p) const {$/;"	f	class:ALE::FEMSection
getConstraintDimension	include/sieve/Field.hh	/^    int getConstraintDimension(const point_type& p) const {$/;"	f	class:ALE::GeneralSection
getConstraintDimension	include/sieve/Field.hh	/^    int getConstraintDimension(const point_type& p) const {$/;"	f	class:ALE::Section
getConstraintDimension	include/sieve/Field.hh	/^    int getConstraintDimension(const point_type& p, const int space) const {$/;"	f	class:ALE::FEMSection
getConstraintDimension	include/sieve/Field.hh	/^    int getConstraintDimension(const point_type& p, const int space) const {$/;"	f	class:ALE::GeneralSection
getConstraintDof	include/sieve/Field.hh	/^    const int *getConstraintDof(const point_type& p) const {$/;"	f	class:ALE::FEMSection
getConstraintDof	include/sieve/Field.hh	/^    const int *getConstraintDof(const point_type& p) const {$/;"	f	class:ALE::GeneralSection
getConstraintDof	include/sieve/Field.hh	/^    const int *getConstraintDof(const point_type& p, const int space) const {$/;"	f	class:ALE::GeneralSection
getCustomRestrictAtlas	include/sieve/Field.hh	/^    void getCustomRestrictAtlas(const int tag, const int *offsets[], const int *indices[]) {$/;"	f	class:ALE::GeneralSection
getCustomUpdateAtlas	include/sieve/Field.hh	/^    void getCustomUpdateAtlas(const int tag, const int *offsets[], const int *indices[]) {$/;"	f	class:ALE::GeneralSection
getCxxFlags	config/BuildSystem/config/compilerOptions.py	/^  def getCxxFlags(self, compiler, bopt):$/;"	m	class:CompilerOptions
getDatafilespath	config/PETSc/utilities/dataFilesPath.py	/^  def getDatafilespath(self):$/;"	m	class:Configure
getDeallocationTotal	include/sieve/ALE_mem.hh	/^    long long getDeallocationTotal() {return getDeallocationTotal(stageNames.front());};$/;"	f	class:ALE::MemoryLogger
getDeallocationTotal	include/sieve/ALE_mem.hh	/^    long long getDeallocationTotal(const std::string& stage) {return stages[stage].second.total;};$/;"	f	class:ALE::MemoryLogger
getDefault	include/sieve/IField.hh	/^    const value_type *getDefault() const {return this->_emptyValue.v;}$/;"	f	class:ALE::IUniformSection
getDefaultInstallDir	config/BuildSystem/config/package.py	/^  def getDefaultInstallDir(self):$/;"	m	class:Package
getDefaultLanguage	config/BuildSystem/config/package.py	/^  def getDefaultLanguage(self):$/;"	m	class:Package
getDefaultMacros	config/BuildSystem/config/autoconf.py	/^  def getDefaultMacros(self):$/;"	m	class:Configure
getDefaultPrecision	config/BuildSystem/config/packages/BlasLapack.py	/^  def getDefaultPrecision(self):$/;"	m	class:Configure
getDefaultPrecision	config/BuildSystem/config/packages/f2cblaslapack.py	/^  def getDefaultPrecision(self):$/;"	m	class:Configure
getDefaultValue	include/sieve/Field.hh	/^    value_type getDefaultValue() {return this->_value[1];};$/;"	f	class:ALE::ConstantSection
getDefaultValue	include/sieve/IField.hh	/^    value_type getDefaultValue() {return this->_value[1];};$/;"	f	class:ALE::IConstantSection
getDefaultVariables	config/BuildSystem/config/autoconf.py	/^  def getDefaultVariables(self):$/;"	m	class:Configure
getDefineFlags	config/BuildSystem/build/processor.py	/^  def getDefineFlags(self, source = None):$/;"	m	class:Compiler
getDefineName	config/BuildSystem/config/functions.py	/^  def getDefineName(self, funcName):$/;"	m	class:Configure
getDefineName	config/BuildSystem/config/headers.py	/^  def getDefineName(self, header):$/;"	m	class:Configure
getDefineName	config/BuildSystem/config/libraries.py	/^  def getDefineName(self, library):$/;"	m	class:Configure
getDependencies	config/BuildSystem/sourceDatabase.py	/^  def getDependencies(self, source):$/;"	m	class:SourceDB
getDependenciesSIDL	config/BuildSystem/build/compile/SIDL.py	/^  def getDependenciesSIDL(self):$/;"	m	class:Compiler
getDependencyPaths	config/BuildSystem/build/framework.py	/^  def getDependencyPaths(self):$/;"	m	class:Framework
getDescription	config/BuildSystem/help.py	/^  def getDescription(self, section, name):$/;"	m	class:Help
getDescription	config/BuildSystem/help.py	/^  def getDescription(self, section, name):$/;"	m	class:Info
getDimension	include/sieve/CartesianSieve.hh	/^    int getDimension() const {return this->_dim;};$/;"	f	class:ALE::CartesianSieve
getDimension	include/sieve/CartesianSieve.hh	/^    int getDimension() {return this->_dim;};$/;"	f	class:ALE::CartesianMesh
getDimension	include/sieve/Mesh.hh	/^    int getDimension() const {return this->_dim;};$/;"	f	class:ALE::IMesh
getDimension	include/sieve/Mesh.hh	/^    int getDimension() const {return this->_dim;};$/;"	f	class:ALE::Mesh
getDimension	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^int getDimension() { return dim; }$/;"	f	class:ALE::Hierarchy::HierarchyBuilder
getDir	config/BuildSystem/config/package.py	/^  def getDir(self, retry = 1):$/;"	m	class:Package
getDir	config/BuildSystem/config/packages/PETSc.py	/^  def getDir(self):$/;"	m	class:Configure
getDir	config/PETSc/petsc.py	/^  def getDir(self):$/;"	m	class:Configure
getDiscretization	include/sieve/CartesianSieve.hh	/^    const Obj<Discretization>&    getDiscretization() {return this->_discretization;};$/;"	f	class:ALE::CartesianMesh
getDiscretization	include/sieve/FEMProblem.hh	/^      const Obj<GeneralDiscretization>& getDiscretization() {return this->getDiscretization("default");};$/;"	f	class:ALE::Problem::GenericFormSubProblem
getDiscretization	include/sieve/FEMProblem.hh	/^      const Obj<GeneralDiscretization>& getDiscretization(const std::string& name) {return this->_discretizations[name];};$/;"	f	class:ALE::Problem::GenericFormSubProblem
getDiscretization	include/sieve/Mesh.hh	/^    const Obj<Discretization>& getDiscretization() {return this->getDiscretization("default");};$/;"	f	class:ALE::IMesh
getDiscretization	include/sieve/Mesh.hh	/^    const Obj<Discretization>& getDiscretization() {return this->getDiscretization("default");};$/;"	f	class:ALE::Mesh
getDiscretization	include/sieve/Mesh.hh	/^    const Obj<Discretization>& getDiscretization(const std::string& name) {return this->_discretizations[name];};$/;"	f	class:ALE::IMesh
getDiscretization	include/sieve/Mesh.hh	/^    const Obj<Discretization>& getDiscretization(const std::string& name) {return this->_discretizations[name];};$/;"	f	class:ALE::Mesh
getDiscretizations	include/sieve/FEMProblem.hh	/^      Obj<names_type> getDiscretizations() const {$/;"	f	class:ALE::Problem::GenericFormSubProblem
getDiscretizations	include/sieve/Mesh.hh	/^    Obj<names_type> getDiscretizations() const {$/;"	f	class:ALE::IMesh
getDiscretizations	include/sieve/Mesh.hh	/^    Obj<names_type> getDiscretizations() const {$/;"	f	class:ALE::Mesh
getDispatchNames	config/BuildSystem/config/compilers.py	/^  def getDispatchNames(self):$/;"	m	class:Configure
getDistRecvOverlap	include/sieve/CartesianSieve.hh	/^    const Obj<recv_overlap_type>& getDistRecvOverlap() const {return this->_distRecvOverlap;};$/;"	f	class:ALE::CartesianBundle
getDistRecvOverlap	include/sieve/Mesh.hh	/^    const Obj<recv_overlap_type>& getDistRecvOverlap() const {return this->_distRecvOverlap;};$/;"	f	class:ALE::Bundle
getDistRecvOverlap	include/sieve/Topology.hh	/^    const Obj<recv_overlap_type>& getDistRecvOverlap() const {return this->_distRecvOverlap;};$/;"	f	class:ALE::Topology
getDistSendOverlap	include/sieve/CartesianSieve.hh	/^    const Obj<send_overlap_type>& getDistSendOverlap() const {return this->_distSendOverlap;};$/;"	f	class:ALE::CartesianBundle
getDistSendOverlap	include/sieve/Mesh.hh	/^    const Obj<send_overlap_type>& getDistSendOverlap() const {return this->_distSendOverlap;};$/;"	f	class:ALE::Bundle
getDistSendOverlap	include/sieve/Topology.hh	/^    const Obj<send_overlap_type>& getDistSendOverlap() const {return this->_distSendOverlap;};$/;"	f	class:ALE::Topology
getDofClass	include/sieve/FEMProblem.hh	/^      virtual int           getDofClass(const int dim) {return this->_dim2class[dim];};$/;"	f	class:ALE::Problem::GeneralDiscretization
getDofClass	include/sieve/Mesh.hh	/^    int  getDofClass(const int dim) {return this->_dim2class[dim];};$/;"	f	class:ALE::Discretization
getDualIntegrator	include/sieve/Mesh.hh	/^    integrator_type getDualIntegrator() const {return this->_integrator;};$/;"	f	class:ALE::BoundaryCondition
getDynamicLinker	config/BuildSystem/config/base.py	/^  def getDynamicLinker(self):$/;"	m	class:Configure
getDynamicLinkerCmd	config/BuildSystem/config/base.py	/^  def getDynamicLinkerCmd(self):$/;"	m	class:Configure
getDynamicLinkerFlags	config/BuildSystem/config/base.py	/^  def getDynamicLinkerFlags(self):$/;"	m	class:Configure
getDynamicLinkerObject	config/BuildSystem/script.py	/^  def getDynamicLinkerObject(self, language):$/;"	m	class:LanguageProcessor
getEdges	config/BuildSystem/build/buildGraph.py	/^  def getEdges(self, vertex):$/;"	m	class:BuildGraph
getEdges	config/BuildSystem/graph.py	/^  def getEdges(self, vertex):$/;"	m	class:DirectedGraph
getEditedFiles	config/BuildSystem/sourceControl.py	/^  def getEditedFiles(self, files):$/;"	m	class:BitKeeper
getEditedFiles	config/BuildSystem/sourceControl.py	/^  def getEditedFiles(self, files):$/;"	m	class:VersionControl
getElementIntegrals	config/PETSc/FEM.py	/^  def getElementIntegrals(self):$/;"	m	class:QuadratureGenerator
getElementSource	config/PETSc/FEM.py	/^  def getElementSource(self, elements, numBlocks = 1, operator = None, sourceType = 'CPU', tensor = 0, isBoundary = False):$/;"	m	class:QuadratureGenerator
getEntryPrompt	config/BuildSystem/nargs.py	/^  def getEntryPrompt(self):$/;"	m	class:Arg
getEntryPrompt	config/BuildSystem/nargs.py	/^  def getEntryPrompt(self):$/;"	m	class:ArgBool
getEntryPrompt	config/BuildSystem/nargs.py	/^  def getEntryPrompt(self):$/;"	m	class:ArgDir
getEntryPrompt	config/BuildSystem/nargs.py	/^  def getEntryPrompt(self):$/;"	m	class:ArgDirList
getEntryPrompt	config/BuildSystem/nargs.py	/^  def getEntryPrompt(self):$/;"	m	class:ArgDownload
getEntryPrompt	config/BuildSystem/nargs.py	/^  def getEntryPrompt(self):$/;"	m	class:ArgExecutable
getEntryPrompt	config/BuildSystem/nargs.py	/^  def getEntryPrompt(self):$/;"	m	class:ArgFuzzyBool
getEntryPrompt	config/BuildSystem/nargs.py	/^  def getEntryPrompt(self):$/;"	m	class:ArgInt
getEntryPrompt	config/BuildSystem/nargs.py	/^  def getEntryPrompt(self):$/;"	m	class:ArgLibrary
getEntryPrompt	config/BuildSystem/nargs.py	/^  def getEntryPrompt(self):$/;"	m	class:ArgReal
getExactSolution	include/sieve/FEMProblem.hh	/^      Obj<GeneralBoundaryCondition> getExactSolution(){return _exactSolution;};$/;"	f	class:ALE::Problem::GenericFormSubProblem
getExactSolution	include/sieve/Mesh.hh	/^    const Obj<BoundaryCondition>& getExactSolution() {return this->_exactSolution;};$/;"	f	class:ALE::Discretization
getExecutable	config/BuildSystem/config/base.py	/^  def getExecutable(self, names, path = [], getFullPath = 0, useDefaultPath = 0, resultName = '', setMakeMacro = 1):$/;"	m	class:Configure
getExecutableCompileTarget	config/BuildSystem/build/templates/usingCxx.py	/^  def getExecutableCompileTarget(self, program):$/;"	m	class:UsingCxx
getExecutableCompileTarget	config/BuildSystem/build/templates/usingPython.py	/^  def getExecutableCompileTarget(self, program):$/;"	m	class:UsingPython
getExecutableLibrary	config/BuildSystem/build/templates/usingCxx.py	/^  def getExecutableLibrary(self, program):$/;"	m	class:UsingCxx
getExecutableTarget	config/BuildSystem/build/templates/Compile.py	/^  def getExecutableTarget(self, program):$/;"	m	class:Template
getExecutables	config/BuildSystem/config/base.py	/^  def getExecutables(self, names, path = '', getFullPath = 0, useDefaultPath = 0, resultName = ''):$/;"	m	class:Configure
getExternalPackagesDir	config/BuildSystem/config/package.py	/^  def getExternalPackagesDir(self):$/;"	m	class:Package
getExtraArguments	config/BuildSystem/config/compile/C.py	/^  def getExtraArguments(self):$/;"	m	class:DynamicLinker
getExtraArguments	config/BuildSystem/config/compile/C.py	/^  def getExtraArguments(self):$/;"	m	class:Linker
getExtraArguments	config/BuildSystem/config/compile/C.py	/^  def getExtraArguments(self):$/;"	m	class:SharedLinker
getExtraArguments	config/BuildSystem/config/compile/CUDA.py	/^  def getExtraArguments(self):$/;"	m	class:Linker
getExtraArguments	config/BuildSystem/config/compile/Cxx.py	/^  def getExtraArguments(self):$/;"	m	class:Linker
getExtraArguments	config/BuildSystem/config/compile/Cxx.py	/^  def getExtraArguments(self):$/;"	m	class:SharedLinker
getExtraArguments	config/BuildSystem/config/compile/FC.py	/^  def getExtraArguments(self):$/;"	m	class:Linker
getExtraArguments	config/BuildSystem/config/compile/processor.py	/^  def getExtraArguments(self):$/;"	m	class:Processor
getFactory	include/sieve/Mesh.hh	/^    const Obj<MeshNumberingFactory>& getFactory() const {return this->_factory;};$/;"	f	class:ALE::Bundle
getFactory	include/sieve/Mesh.hh	/^    const Obj<MeshNumberingFactory>& getFactory() const {return this->_factory;};$/;"	f	class:ALE::IBundle
getFiberDimension	include/sieve/Field.hh	/^    int getFiberDimension(const Obj<atlas_type>& atlas, const point_type& p) const {$/;"	f	class:ALE::FEMSection
getFiberDimension	include/sieve/Field.hh	/^    int getFiberDimension(const Obj<atlas_type>& atlas, const point_type& p) const {$/;"	f	class:ALE::GeneralSection
getFiberDimension	include/sieve/Field.hh	/^    int getFiberDimension(const Obj<atlas_type>& atlas, const point_type& p) const {$/;"	f	class:ALE::Section
getFiberDimension	include/sieve/Field.hh	/^    int getFiberDimension(const point_type& p) const {$/;"	f	class:ALE::ConstantSection
getFiberDimension	include/sieve/Field.hh	/^    int getFiberDimension(const point_type& p) const {$/;"	f	class:ALE::FEMSection
getFiberDimension	include/sieve/Field.hh	/^    int getFiberDimension(const point_type& p) const {$/;"	f	class:ALE::FauxConstantSection
getFiberDimension	include/sieve/Field.hh	/^    int getFiberDimension(const point_type& p) const {$/;"	f	class:ALE::GeneralSection
getFiberDimension	include/sieve/Field.hh	/^    int getFiberDimension(const point_type& p) const {$/;"	f	class:ALE::NewUniformSection
getFiberDimension	include/sieve/Field.hh	/^    int getFiberDimension(const point_type& p) const {$/;"	f	class:ALE::Section
getFiberDimension	include/sieve/Field.hh	/^    int getFiberDimension(const point_type& p) const {$/;"	f	class:ALE::UniformSection
getFiberDimension	include/sieve/Field.hh	/^    int getFiberDimension(const point_type& p, const int space) const {$/;"	f	class:ALE::FEMSection
getFiberDimension	include/sieve/Field.hh	/^    int getFiberDimension(const point_type& p, const int space) const {$/;"	f	class:ALE::GeneralSection
getFiberDimension	include/sieve/Field.hh	/^    int getFiberDimension(const point_type& p, const int space) {return this->getFiberDimension(p);};$/;"	f	class:ALE::Section
getFiberDimension	include/sieve/IField.hh	/^    int getFiberDimension(const point_type& p) const {$/;"	f	class:ALE::IConstantSection
getFiberDimension	include/sieve/IField.hh	/^    int getFiberDimension(const point_type& p) const {$/;"	f	class:ALE::IUniformSection
getFiberDimension	include/sieve/Sections.hh	/^    int getFiberDimension(const point_type& p) const {$/;"	f	class:ALE::BaseSection
getFiberDimension	include/sieve/Sections.hh	/^    int getFiberDimension(const point_type& p) const {$/;"	f	class:ALE::BaseSectionV
getFiberDimension	include/sieve/Sections.hh	/^    int getFiberDimension(const point_type& p) const {$/;"	f	class:ALE::LabelBaseSection
getFiberDimension	include/sieve/Sections.hh	/^    int getFiberDimension(const point_type& p) const {$/;"	f	class:ALE::LabelBaseSectionV
getFiberDimension	include/sieve/Sections.hh	/^    int getFiberDimension(const point_type& p) {$/;"	f	class:ALE::ConeSection
getFiberDimension	include/sieve/Sections.hh	/^    int getFiberDimension(const point_type& p) {$/;"	f	class:ALE::ConeSectionV
getFiberDimension	include/sieve/Sections.hh	/^    int getFiberDimension(const point_type& p) {$/;"	f	class:ALE::ConeSizeSection
getFiberDimension	include/sieve/Sections.hh	/^    int getFiberDimension(const point_type& p) {$/;"	f	class:ALE::ConeSizeSectionV
getFiberDimension	include/sieve/Sections.hh	/^    int getFiberDimension(const point_type& p) {$/;"	f	class:ALE::LabelSection
getFiberDimension	include/sieve/Sections.hh	/^    int getFiberDimension(const point_type& p) {$/;"	f	class:ALE::OrientedConeSectionV
getFibration	include/sieve/Field.hh	/^    Obj<FEMSection> getFibration(const int space) const {$/;"	f	class:ALE::FEMSection
getFibration	include/sieve/Field.hh	/^    Obj<GeneralSection> getFibration(const int space) const {$/;"	f	class:ALE::GeneralSection
getFibration	include/sieve/IField.hh	/^    Obj<IGeneralSection> getFibration(const int space) const {$/;"	f	class:ALE::IGeneralSection
getFileCreatePause	config/BuildSystem/config/framework.py	/^  def getFileCreatePause(self):$/;"	m	class:Framework
getFiniteElement	include/sieve/UFCProblem.hh	/^      ufc::finite_element * getFiniteElement() {$/;"	f	class:ALE::Problem::UFCBoundaryCondition
getFiniteElement	include/sieve/UFCProblem.hh	/^      ufc::finite_element * getFiniteElement() {$/;"	f	class:ALE::Problem::UFCFormSubProblem
getFiniteElement	include/sieve/UFCProblem.hh	/^      ufc::finite_element * getFiniteElement() {return _finite_element;};$/;"	f	class:ALE::Problem::UFCDiscretization
getFlags	config/BuildSystem/build/compile/SIDL.py	/^  def getFlags(self, source):$/;"	m	class:Compiler
getFlags	config/BuildSystem/build/processor.py	/^  def getFlags(self, source):$/;"	m	class:Compiler
getFlags	config/BuildSystem/build/processor.py	/^  def getFlags(self, source):$/;"	m	class:Linker
getFlags	config/BuildSystem/config/compile/C.py	/^  def getFlags(self):$/;"	m	class:DynamicLinker
getFlags	config/BuildSystem/config/compile/C.py	/^  def getFlags(self):$/;"	m	class:Linker
getFlags	config/BuildSystem/config/compile/C.py	/^  def getFlags(self):$/;"	m	class:SharedLinker
getFlags	config/BuildSystem/config/compile/C.py	/^  def getFlags(self):$/;"	m	class:StaticLinker
getFlags	config/BuildSystem/config/compile/Cxx.py	/^  def getFlags(self):$/;"	m	class:Linker
getFlags	config/BuildSystem/config/compile/Cxx.py	/^  def getFlags(self):$/;"	m	class:SharedLinker
getFlags	config/BuildSystem/config/compile/FC.py	/^  def getFlags(self):$/;"	m	class:Linker
getFlags	config/BuildSystem/config/compile/processor.py	/^  def getFlags(self):$/;"	m	class:Processor
getFortranFlags	config/BuildSystem/config/compilerOptions.py	/^  def getFortranFlags(self, compiler, bopt):$/;"	m	class:CompilerOptions
getFound	config/BuildSystem/config/packages/PETSc.py	/^  def getFound(self):$/;"	m	class:Configure
getFound	config/PETSc/petsc.py	/^  def getFound(self):$/;"	m	class:Configure
getFullDefineName	config/BuildSystem/config/framework.py	/^  def getFullDefineName(self, child, name, prefix = None):$/;"	m	class:Framework
getFullLinkerCmd	config/BuildSystem/config/base.py	/^  def getFullLinkerCmd(self, objects, executable):$/;"	m	class:Configure
getFunction	include/sieve/Mesh.hh	/^    function_type getFunction() const {return this->_func;};$/;"	f	class:ALE::BoundaryCondition
getFunction	include/sieve/UFCProblem.hh	/^      ufc::function * getFunction() {$/;"	f	class:ALE::Problem::UFCBoundaryCondition
getFunctionName	config/PETSc/Configure.py	/^    def getFunctionName(lang):$/;"	f	function:Configure.configureFunctionName
getGenericCompileTarget	config/BuildSystem/build/templates/usingCxx.py	/^  def getGenericCompileTarget(self, action):$/;"	m	class:UsingCxx
getGenericCompileTarget	config/BuildSystem/build/templates/usingPython.py	/^  def getGenericCompileTarget(self, action):$/;"	m	class:UsingPython
getGlobalOffset	include/sieve/INumbering.hh	/^    int        getGlobalOffset(const int p) const {return this->_offsets[p];};$/;"	f	class:ALE::IGlobalOrder
getGlobalOffset	include/sieve/INumbering.hh	/^    int        getGlobalOffset(const int p) const {return this->_offsets[p];};$/;"	f	class:ALE::INumbering
getGlobalOffset	include/sieve/Numbering.hh	/^    int        getGlobalOffset(const int p) const {return this->_offsets[p];};$/;"	f	class:ALE::GlobalOrder
getGlobalOffset	include/sieve/Numbering.hh	/^    int        getGlobalOffset(const int p) const {return this->_offsets[p];};$/;"	f	class:ALE::Numbering
getGlobalOffsets	include/sieve/INumbering.hh	/^    const int *getGlobalOffsets() const {return this->_offsets;};$/;"	f	class:ALE::IGlobalOrder
getGlobalOffsets	include/sieve/INumbering.hh	/^    const int *getGlobalOffsets() const {return this->_offsets;};$/;"	f	class:ALE::INumbering
getGlobalOffsets	include/sieve/Numbering.hh	/^    const int *getGlobalOffsets() const {return this->_offsets;};$/;"	f	class:ALE::GlobalOrder
getGlobalOffsets	include/sieve/Numbering.hh	/^    const int *getGlobalOffsets() const {return this->_offsets;};$/;"	f	class:ALE::Numbering
getGlobalOrder	include/sieve/INumbering.hh	/^    const Obj<order_type>& getGlobalOrder(const Obj<ABundle_>& bundle, const std::string& name, const Obj<Section_>& section) {$/;"	f	class:ALE::INumberingFactory
getGlobalOrder	include/sieve/Numbering.hh	/^    const Obj<order_type>& getGlobalOrder(const Obj<ABundle_>& bundle, const std::string& name, const Iterator_& pointsBegin, const Iterator_& pointsEnd, const Obj<Section_>& section, const int space = -1, const Obj<label_type>& label = NULL) {$/;"	f	class:ALE::NumberingFactory
getGlobalOrder	include/sieve/Numbering.hh	/^    const Obj<order_type>& getGlobalOrder(const Obj<ABundle_>& bundle, const std::string& name, const Obj<Section_>& section, const int space = -1, const Obj<label_type>& label = NULL) {$/;"	f	class:ALE::NumberingFactory
getGlobalOrderWithBC	include/sieve/Numbering.hh	/^    const Obj<order_type>& getGlobalOrderWithBC(const Obj<ABundle_>& bundle, const std::string& name, const Iterator_& pointsBegin, const Iterator_& pointsEnd, const Obj<Section_>& section, const int space = -1, const Obj<label_type>& label = NULL) {$/;"	f	class:ALE::NumberingFactory
getGlobalOrderWithBC	include/sieve/Numbering.hh	/^    const Obj<order_type>& getGlobalOrderWithBC(const Obj<ABundle_>& bundle, const std::string& name, const Obj<Section_>& section, const int space = -1, const Obj<label_type>& label = NULL) {$/;"	f	class:ALE::NumberingFactory
getGlobalSize	include/sieve/INumbering.hh	/^    int        getGlobalSize() const {return this->_offsets[this->commSize()];};$/;"	f	class:ALE::IGlobalOrder
getGlobalSize	include/sieve/INumbering.hh	/^    int        getGlobalSize() const {return this->_offsets[this->commSize()];};$/;"	f	class:ALE::INumbering
getGlobalSize	include/sieve/Numbering.hh	/^    int        getGlobalSize() const {return this->_offsets[this->commSize()];};$/;"	f	class:ALE::GlobalOrder
getGlobalSize	include/sieve/Numbering.hh	/^    int        getGlobalSize() const {return this->_offsets[this->commSize()];};$/;"	f	class:ALE::Numbering
getGrayCode	include/sieve/CartesianSieve.hh	/^    static void getGrayCode(const int n, const int size, int code[]) {$/;"	f	namespace:ALE::CartesianSieveDef
getHeadRevision	config/BuildSystem/build/framework.py	/^  def getHeadRevision(self, proj):$/;"	m	class:Framework
getHeaderPrefix	config/BuildSystem/config/framework.py	/^  def getHeaderPrefix(self, child):$/;"	m	class:Framework
getHeaders	config/BuildSystem/config/base.py	/^  def getHeaders(self):$/;"	m	class:Configure
getHgSizes_Zoltan	src/dm/impls/mesh/meshzoltan.c	/^void getHgSizes_Zoltan(void *data, int *num_lists, int *num_pins, int *format, int *ierr)$/;"	f
getHg_Zoltan	src/dm/impls/mesh/meshzoltan.c	/^void getHg_Zoltan(void *data, int num_gid_entries, int num_row_or_col, int num_pins, int format, ZOLTAN_ID_PTR vtxedge_GID, int *vtxedge_ptr, ZOLTAN_ID_PTR pin_GID, int *ierr)$/;"	f
getHoles	include/sieve/Mesh.hh	/^    const holes_type& getHoles() const {return this->_holes;};$/;"	f	class:ALE::IMesh
getHoles	include/sieve/Mesh.hh	/^    const holes_type& getHoles() const {return this->_holes;};$/;"	f	class:ALE::Mesh
getIORCompileTarget	config/BuildSystem/build/templates/usingCxx.py	/^  def getIORCompileTarget(self, action):$/;"	m	class:UsingCxx
getId	include/petsclog.hh	/^    PetscLogEvent getId() {return this->id;};$/;"	f	class:PETSc::LogEvent
getId	include/petsclog.hh	/^    PetscLogEvent getId() {return this->id;};$/;"	f	class:PETSc::LogStage
getImplementations	config/BuildSystem/project.py	/^  def getImplementations(self):$/;"	m	class:Project
getImplicitDynamicLibraries	config/BuildSystem/maker.py	/^  def getImplicitDynamicLibraries(self):$/;"	m	class:BasicMake
getImplicitExecutables	config/BuildSystem/maker.py	/^  def getImplicitExecutables(self):$/;"	m	class:BasicMake
getImplicitLibraries	config/BuildSystem/maker.py	/^  def getImplicitLibraries(self):$/;"	m	class:BasicMake
getInclude	config/BuildSystem/config/packages/PETSc.py	/^  def getInclude(self, useTrial = 0):$/;"	m	class:Configure
getInclude	config/PETSc/petsc.py	/^  def getInclude(self, useTrial = 0):$/;"	m	class:Configure
getIncludeArgument	config/BuildSystem/config/headers.py	/^  def getIncludeArgument(self, include):$/;"	m	class:Configure
getIncludeArgumentList	config/BuildSystem/config/headers.py	/^  def getIncludeArgumentList(self, include):$/;"	m	class:Configure
getIncludeDirs	config/BuildSystem/config/package.py	/^  def getIncludeDirs(self, prefix, includeDir):$/;"	m	class:Package
getIncludeFlags	config/BuildSystem/build/compile/SIDL.py	/^  def getIncludeFlags(self, source):$/;"	m	class:Compiler
getIncludeFlags	config/BuildSystem/build/processor.py	/^  def getIncludeFlags(self, source = None):$/;"	m	class:Compiler
getIncludeModulesArgumentList	config/BuildSystem/config/headers.py	/^  def getIncludeModulesArgumentList(self, include):$/;"	m	class:Configure
getIncludes	config/BuildSystem/maker.py	/^  def getIncludes(self):$/;"	m	class:SIDLMake
getIndex	include/sieve/Field.hh	/^    const typename index_type::index_type& getIndex(const point_type& p) {$/;"	f	class:ALE::GeneralSection
getIndex	include/sieve/Field.hh	/^    const typename index_type::index_type& getIndex(const point_type& p) {$/;"	f	class:ALE::Section
getIndex	include/sieve/INumbering.hh	/^    virtual int getIndex(const point_type& p) {$/;"	f	class:ALE::IGlobalOrder
getIndex	include/sieve/INumbering.hh	/^    virtual int getIndex(const point_type& point) {$/;"	f	class:ALE::INumbering
getIndex	include/sieve/Numbering.hh	/^    virtual int getIndex(const point_type& p) {$/;"	f	class:ALE::GlobalOrder
getIndex	include/sieve/Numbering.hh	/^    virtual int getIndex(const point_type& point) {$/;"	f	class:ALE::Numbering
getIndexArray	include/sieve/Mesh.hh	/^    int *getIndexArray(const int size) {$/;"	f	class:ALE::Bundle
getIndices	include/sieve/CartesianSieve.hh	/^      void getIndices(const point_type& cell, const int indices[]) {$/;"	f	class:ALE::CartesianSieveDef::ConeSequence
getIndices	include/sieve/CartesianSieve.hh	/^      void getIndices(const point_type& vertex, const int indices[]) {$/;"	f	class:ALE::CartesianSieveDef::SupportSequence
getIndices	include/sieve/CartesianSieve.hh	/^    static void getIndices(const int dim, const int sizes[], const int& point, int indices[]) {$/;"	f	namespace:ALE::CartesianSieveDef
getIndices	include/sieve/FEMProblem.hh	/^      virtual const int *getIndices() {return this->_indices;};$/;"	f	class:ALE::Problem::GeneralDiscretization
getIndices	include/sieve/FEMProblem.hh	/^      virtual const int *getIndices(const int marker) {$/;"	f	class:ALE::Problem::GeneralDiscretization
getIndices	include/sieve/Field.hh	/^    void getIndices(const point_type& p, PetscInt indices[], PetscInt *indx, const int orientation = 1, const bool freeOnly = false, const bool skipConstraints = false) {$/;"	f	class:ALE::Section
getIndices	include/sieve/Field.hh	/^    void getIndices(const point_type& p, PetscInt indices[], PetscInt *indx, const int orientation = 1, const bool freeOnly = false, const bool skipConstraints = true) {$/;"	f	class:ALE::GeneralSection
getIndices	include/sieve/Field.hh	/^    void getIndices(const point_type& p, const Obj<Order_>& order, PetscInt indices[], PetscInt *indx, const int orientation = 1, const bool freeOnly = false, const bool skipConstraints = false) {$/;"	f	class:ALE::GeneralSection
getIndices	include/sieve/Field.hh	/^    void getIndices(const point_type& p, const Obj<Order_>& order, PetscInt indices[], PetscInt *indx, const int orientation = 1, const bool freeOnly = false, const bool skipConstraints = false) {$/;"	f	class:ALE::Section
getIndices	include/sieve/Field.hh	/^    void getIndices(const point_type& p, const int start, PetscInt indices[], PetscInt *indx, const int orientation = 1, const bool freeOnly = false, const bool skipConstraints = false) {$/;"	f	class:ALE::GeneralSection
getIndices	include/sieve/Field.hh	/^    void getIndices(const point_type& p, const int start, PetscInt indices[], PetscInt *indx, const int orientation = 1, const bool freeOnly = false, const bool skipConstraints = false) {$/;"	f	class:ALE::Section
getIndices	include/sieve/Mesh.hh	/^    const indices_type getIndices(const Obj<Section_>& section, const point_type& p, const Obj<Numbering>& numbering, const int level = -1) {$/;"	f	class:ALE::Bundle
getIndices	include/sieve/Mesh.hh	/^    const indices_type getIndices(const Obj<Section_>& section, const point_type& p, const int level = -1) {$/;"	f	class:ALE::Bundle
getIndices	include/sieve/Mesh.hh	/^    const int *getIndices() {return this->_indices;};$/;"	f	class:ALE::Discretization
getIndices	include/sieve/Mesh.hh	/^    const int *getIndices(const int marker) {$/;"	f	class:ALE::Discretization
getIndicesRaw	include/sieve/Field.hh	/^    void getIndicesRaw(const point_type& p, PetscInt indices[], PetscInt *indx, const int orientation = 1) {$/;"	f	class:ALE::GeneralSection
getIndicesRaw	include/sieve/Field.hh	/^    void getIndicesRaw(const point_type& p, const Obj<Order_>& order, PetscInt indices[], PetscInt *indx, const int orientation = 1) {$/;"	f	class:ALE::GeneralSection
getIndicesRaw	include/sieve/Field.hh	/^    void getIndicesRaw(const point_type& p, const int start, PetscInt indices[], PetscInt *indx, const int orientation) {$/;"	f	class:ALE::GeneralSection
getIndicesRaw	include/sieve/Mesh.hh	/^    const indices_type getIndicesRaw(const Obj<Section_>& section, const point_type& p) {$/;"	f	class:ALE::Bundle
getInstallDir	config/BuildSystem/config/package.py	/^  def getInstallDir(self):$/;"	m	class:Package
getIntSection	include/sieve/CartesianSieve.hh	/^    const Obj<int_section_type>& getIntSection(const std::string& name) {$/;"	f	class:ALE::CartesianBundle
getIntSection	include/sieve/Mesh.hh	/^    const Obj<int_section_type>& getIntSection(const std::string& name) {$/;"	f	class:ALE::Bundle
getIntSection	include/sieve/Mesh.hh	/^    const Obj<int_section_type>& getIntSection(const std::string& name) {$/;"	f	class:ALE::IBundle
getIntSections	include/sieve/CartesianSieve.hh	/^    Obj<std::set<std::string> > getIntSections() const {$/;"	f	class:ALE::CartesianBundle
getIntSections	include/sieve/Mesh.hh	/^    Obj<std::set<std::string> > getIntSections() const {$/;"	f	class:ALE::Bundle
getIntSections	include/sieve/Mesh.hh	/^    Obj<std::set<std::string> > getIntSections() const {$/;"	f	class:ALE::IBundle
getIntegral	include/sieve/FEMProblem.hh	/^      const Obj<GeneralIntegral>& getIntegral() {return this->getIntegral("default");};$/;"	f	class:ALE::Problem::GenericFormSubProblem
getIntegral	include/sieve/FEMProblem.hh	/^      const Obj<GeneralIntegral>& getIntegral(const std::string& name) {return this->_integrals[name];};$/;"	f	class:ALE::Problem::GenericFormSubProblem
getIntegral	include/sieve/UFCProblem.hh	/^      virtual ufc::cell_integral * getIntegral () {$/;"	f	class:ALE::Problem::UFCCellIntegral
getIntegrals	include/sieve/FEMProblem.hh	/^      Obj<names_type> getIntegrals() const {$/;"	f	class:ALE::Problem::GenericFormSubProblem
getIntegratorPoints	config/PETSc/FEM.py	/^  def getIntegratorPoints(self, n, element):$/;"	m	class:QuadratureGenerator
getIntegratorSetup	config/PETSc/FEM.py	/^  def getIntegratorSetup(self, n, element, isBd = False):$/;"	m	class:QuadratureGenerator
getIntegratorSetup_IntegralMoment	config/PETSc/FEM.py	/^  def getIntegratorSetup_IntegralMoment(self, n, element):$/;"	m	class:QuadratureGenerator
getIntegratorSetup_PointEvaluation	config/PETSc/FEM.py	/^  def getIntegratorSetup_PointEvaluation(self, n, element, isBd = False):$/;"	m	class:QuadratureGenerator
getInteractive	config/BuildSystem/nargs.py	/^def getInteractive():$/;"	f
getIntermediateFileName	config/BuildSystem/build/processor.py	/^  def getIntermediateFileName(self, source, ext = '.o'):$/;"	m	class:Processor
getInterpreterSuffix	config/BuildSystem/build/templates/usingPython.py	/^  def getInterpreterSuffix(self):$/;"	m	class:UsingPython
getInvRenumbering	include/sieve/ParallelMapping.hh	/^    renumbering_type& getInvRenumbering() {$/;"	f	class:ALE::PointFactory
getIsCone	include/sieve/ISieve.hh	/^      bool getIsCone() const {return this->isCone;};$/;"	f	class:ALE::ISieveVisitor::TransitiveClosureVisitor
getKey	config/BuildSystem/nargs.py	/^  def getKey(self):$/;"	m	class:Arg
getLabel	include/sieve/Mesh.hh	/^    const Obj<label_type>& getLabel(const std::string& name) {$/;"	f	class:ALE::Bundle
getLabel	include/sieve/Mesh.hh	/^    const Obj<label_type>& getLabel(const std::string& name) {$/;"	f	class:ALE::IBundle
getLabel	include/sieve/Topology.hh	/^    const Obj<patch_label_type>& getLabel(const patch_type& patch, const std::string& name) {$/;"	f	class:ALE::Topology
getLabelMarker	include/sieve/FEMProblem.hh	/^      int getLabelMarker() {$/;"	f	class:ALE::Problem::GeneralIntegral
getLabelName	include/sieve/FEMProblem.hh	/^      name_type getLabelName() {$/;"	f	class:ALE::Problem::GeneralIntegral
getLabelName	include/sieve/FEMProblem.hh	/^      virtual const std::string& getLabelName() const {return this->_labelName;};$/;"	f	class:ALE::Problem::GeneralBoundaryCondition
getLabelName	include/sieve/Mesh.hh	/^    const std::string& getLabelName() const {return this->_labelName;};$/;"	f	class:ALE::BoundaryCondition
getLabelStratum	include/sieve/CartesianSieve.hh	/^    virtual const Obj<label_sequence> getLabelStratum(const std::string& name, int value) {$/;"	f	class:ALE::CartesianBundle
getLabelStratum	include/sieve/Mesh.hh	/^    virtual const Obj<label_sequence>& getLabelStratum(const std::string& name, int value) {$/;"	f	class:ALE::Bundle
getLabelStratum	include/sieve/Mesh.hh	/^    virtual const Obj<label_sequence>& getLabelStratum(const std::string& name, int value) {$/;"	f	class:ALE::IBundle
getLabelStratum	include/sieve/Topology.hh	/^    const Obj<label_sequence>& getLabelStratum(const patch_type& patch, const std::string& name, int value) {$/;"	f	class:ALE::Topology
getLabelValue	include/sieve/Mesh.hh	/^      int getLabelValue(const point_type& point) const {$/;"	f	class:ALE::IBundle::LabelVisitor
getLabels	include/sieve/Mesh.hh	/^    const labels_type& getLabels() {$/;"	f	class:ALE::Bundle
getLabels	include/sieve/Mesh.hh	/^    const labels_type& getLabels() {$/;"	f	class:ALE::IBundle
getLabels	include/sieve/Topology.hh	/^    const labels_type& getLabels() {$/;"	f	class:ALE::Topology
getLanguageModule	config/BuildSystem/build/templates/usingC.py	/^  def getLanguageModule(self, language):$/;"	m	class:UsingC
getLanguageModule	config/BuildSystem/build/templates/usingCxx.py	/^  def getLanguageModule(self, language):$/;"	m	class:UsingCxx
getLanguageModule	config/BuildSystem/script.py	/^  def getLanguageModule(self, language, moduleName = None):$/;"	m	class:LanguageProcessor
getLanguages	config/BuildSystem/build/compile/SIDL.py	/^  def getLanguages():$/;"	m	class:SIDLConstants
getLanguages	config/BuildSystem/build/compile/SIDL.py	/^  getLanguages = staticmethod(getLanguages)$/;"	v	class:SIDLConstants
getLeaves	config/BuildSystem/build/buildGraph.py	/^  def getLeaves(graph):$/;"	m	class:BuildGraph
getLeaves	config/BuildSystem/build/buildGraph.py	/^  getLeaves = staticmethod(getLeaves)$/;"	v	class:BuildGraph
getLeaves	config/BuildSystem/graph.py	/^  def getLeaves(graph):$/;"	m	class:DirectedGraph
getLeaves	config/BuildSystem/graph.py	/^  getLeaves = staticmethod(getLeaves)$/;"	v	class:DirectedGraph
getLib	config/BuildSystem/config/packages/PETSc.py	/^  def getLib(self, useTrial = 0):$/;"	m	class:Configure
getLib	config/PETSc/petsc.py	/^  def getLib(self, useTrial = 0):$/;"	m	class:Configure
getLibArgument	config/BuildSystem/config/libraries.py	/^  def getLibArgument(self, library):$/;"	m	class:Configure
getLibArgumentList	config/BuildSystem/config/libraries.py	/^  def getLibArgumentList(self, library):$/;"	m	class:Configure
getLibExt	config/BuildSystem/build/processor.py	/^  def getLibExt(self):$/;"	m	class:ImportSharedLinker
getLibExt	config/BuildSystem/build/processor.py	/^  def getLibExt(self):$/;"	m	class:Linker
getLibExt	config/BuildSystem/build/processor.py	/^  def getLibExt(self):$/;"	m	class:SharedLinker
getLibName	config/BuildSystem/config/libraries.py	/^  def getLibName(library):$/;"	m	class:Configure
getLibName	config/BuildSystem/config/libraries.py	/^  getLibName = staticmethod(getLibName)$/;"	v	class:Configure
getLibraries	config/BuildSystem/script.py	/^  def getLibraries(self):$/;"	m	class:LanguageProcessor
getLibrary	config/BuildSystem/build/processor.py	/^  def getLibrary(self, object):$/;"	m	class:Linker
getLinearAccumulation	config/PETSc/FEM.py	/^  def getLinearAccumulation(self, inputSection, outputSection, elemIter, numBasisFuncs, elemVec, elemMat):$/;"	m	class:QuadratureGenerator
getLinewidth	config/BuildSystem/logger.py	/^  def getLinewidth(self):$/;"	m	class:Logger
getLinker	config/BuildSystem/build/templates/usingC.py	/^  def getLinker(self):$/;"	m	class:UsingC
getLinker	config/BuildSystem/build/templates/usingCxx.py	/^  def getLinker(self):$/;"	m	class:UsingCxx
getLinker	config/BuildSystem/config/base.py	/^  def getLinker(self):$/;"	m	class:Configure
getLinkerCmd	config/BuildSystem/config/base.py	/^  def getLinkerCmd(self):$/;"	m	class:Configure
getLinkerFlags	config/BuildSystem/build/processor.py	/^  def getLinkerFlags(self, source):$/;"	m	class:Archiver
getLinkerFlags	config/BuildSystem/build/processor.py	/^  def getLinkerFlags(self, source):$/;"	m	class:DirectoryArchiver
getLinkerFlags	config/BuildSystem/build/processor.py	/^  def getLinkerFlags(self, source):$/;"	m	class:Linker
getLinkerFlags	config/BuildSystem/build/processor.py	/^  def getLinkerFlags(self, source):$/;"	m	class:SharedLinker
getLinkerFlags	config/BuildSystem/build/templates/usingC.py	/^  def getLinkerFlags(self):$/;"	m	class:UsingC
getLinkerFlags	config/BuildSystem/build/templates/usingCxx.py	/^  def getLinkerFlags(self):$/;"	m	class:UsingCxx
getLinkerFlags	config/BuildSystem/config/base.py	/^  def getLinkerFlags(self):$/;"	m	class:Configure
getLinkerFlagsArg	config/BuildSystem/config/base.py	/^  def getLinkerFlagsArg(self):$/;"	m	class:Configure
getLinkerFlagsName	config/BuildSystem/config/base.py	/^  def getLinkerFlagsName(self, language):$/;"	m	class:Configure
getLinkerObject	config/BuildSystem/build/templates/usingC.py	/^  def getLinkerObject(self, language):$/;"	m	class:UsingC
getLinkerObject	config/BuildSystem/build/templates/usingCxx.py	/^  def getLinkerObject(self, language):$/;"	m	class:UsingCxx
getLinkerObject	config/BuildSystem/script.py	/^  def getLinkerObject(self, language):$/;"	m	class:LanguageProcessor
getLocalElements_Zoltan	src/dm/impls/mesh/meshzoltan.c	/^void getLocalElements_Zoltan(void *data, int num_gid_entries, int num_lid_entries, ZOLTAN_ID_PTR global_ids, ZOLTAN_ID_PTR local_ids, int wgt_dim, float *obj_wgts, int *ierr)$/;"	f
getLocalNumbering	include/sieve/INumbering.hh	/^    const Obj<numbering_type>& getLocalNumbering(const Obj<ABundle_>& bundle, const int depth) {$/;"	f	class:ALE::INumberingFactory
getLocalNumbering	include/sieve/Numbering.hh	/^    const Obj<numbering_type>& getLocalNumbering(const Obj<ABundle_>& bundle, const int depth) {$/;"	f	class:ALE::NumberingFactory
getLocalOrder	include/sieve/Numbering.hh	/^    const Obj<order_type>& getLocalOrder(const Obj<ABundle_>& bundle, const std::string& name, const Obj<Section_>& section, const int space = -1, const Obj<label_type>& label = NULL) {$/;"	f	class:ALE::NumberingFactory
getLocalSize	include/sieve/INumbering.hh	/^    int        getLocalSize() const {return this->_localSize;};$/;"	f	class:ALE::IGlobalOrder
getLocalSize	include/sieve/INumbering.hh	/^    int        getLocalSize() const {return this->_localSize;};$/;"	f	class:ALE::INumbering
getLocalSize	include/sieve/Numbering.hh	/^    int        getLocalSize() const {return this->_localSize;};$/;"	f	class:ALE::GlobalOrder
getLocalSize	include/sieve/Numbering.hh	/^    int        getLocalSize() const {return this->_localSize;};$/;"	f	class:ALE::Numbering
getLocations	config/BuildSystem/config/packages/PETSc.py	/^  def getLocations(self):$/;"	m	class:Configure
getLocations	config/PETSc/petsc.py	/^  def getLocations(self):$/;"	m	class:Configure
getMPIDatatype	include/sieve/BasicCommunication.hh	/^    MPI_Datatype getMPIDatatype() {$/;"	f	class:ALE::MPIMover
getMPIDatatype	include/sieve/Field.hh	/^    MPI_Datatype getMPIDatatype() {$/;"	f	class:ALE::Field
getMPIType	include/sieve/Completion.hh	/^      MPI_Datatype getMPIType() const {return this->_mpiType;};$/;"	f	class:ALE::New::ParallelFactory
getMacroVariables	config/BuildSystem/config/autoconf.py	/^  def getMacroVariables(self, macro):$/;"	m	class:Configure
getMacroVersion	config/BuildSystem/config/autoconf.py	/^  def getMacroVersion(self, macro):$/;"	m	class:Configure
getMake	config/BuildSystem/maker.py	/^  def getMake(self, url):$/;"	m	class:Make
getMakeMacro	config/BuildSystem/config/base.py	/^  def getMakeMacro(self, name):$/;"	m	class:Configure
getMakeModule	config/BuildSystem/build/framework.py	/^  def getMakeModule(self, root, name = 'make'):$/;"	m	class:Framework
getMakeModule	config/BuildSystem/maker.py	/^  def getMakeModule(self):$/;"	m	class:BasicMake
getMarker	include/sieve/FEMProblem.hh	/^      virtual int getMarker() const {return this->_marker;};$/;"	f	class:ALE::Problem::GeneralBoundaryCondition
getMarker	include/sieve/Mesh.hh	/^    int getMarker() const {return this->_marker;};$/;"	f	class:ALE::BoundaryCondition
getMaxConeSize	include/sieve/ISieve.hh	/^    index_type getMaxConeSize() const {$/;"	f	class:ALE::IFSieve
getMaxDepth	include/sieve/Mesh.hh	/^      int getMaxDepth() const {return this->maxDepth;};$/;"	f	class:ALE::IBundle::DepthVisitor
getMaxDof	include/sieve/Mesh.hh	/^    int getMaxDof() const {return this->_maxDof;};$/;"	f	class:ALE::IMesh
getMaxHeight	include/sieve/Mesh.hh	/^      int getMaxHeight() const {return this->maxHeight;};$/;"	f	class:ALE::IBundle::HeightVisitor
getMaxSize	include/sieve/ISieve.hh	/^      int  getMaxSize() const {return this->size;};$/;"	f	class:ALE::ISieveVisitor::IndicesVisitor
getMaxSize	include/sieve/ISieve.hh	/^      int  getMaxSize() const {return this->size;};$/;"	f	class:ALE::ISieveVisitor::RestrictVecVisitor
getMaxSize	include/sieve/ISieve.hh	/^      int  getMaxSize() const {return this->size;};$/;"	f	class:ALE::ISieveVisitor::RestrictVisitor
getMaxSupportSize	include/sieve/ISieve.hh	/^    index_type getMaxSupportSize() const {$/;"	f	class:ALE::IFSieve
getMaxValue	include/sieve/Mesh.hh	/^    int getMaxValue (const Obj<label_type>& label, const Obj<InputPoints>& points, const int defValue = 0) {$/;"	f	class:ALE::Bundle
getMaxValue	include/sieve/Mesh.hh	/^    int getMaxValue (const Obj<label_type>& label, const Obj<InputPoints>& points, const int defValue = 0) {$/;"	f	class:ALE::IBundle
getMaxValue	include/sieve/Topology.hh	/^    int getMaxValue (const Obj<patch_label_type>& label, const Obj<InputPoints>& points, const int defValue = 0) {$/;"	f	class:ALE::Topology
getMaxVolume	include/sieve/Mesh.hh	/^    double getMaxVolume() {$/;"	f	class:ALE::Mesh
getMaxVolume	include/sieve/Mesh.hh	/^    typename real_section_type::value_type getMaxVolume() {$/;"	f	class:ALE::IMesh
getMesh	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^Obj<ALE::Mesh> getMesh() { return mesh; }$/;"	f	class:ALE::Hierarchy::HierarchyBuilder
getMeshType	config/PETSc/FEM.py	/^  def getMeshType(self):$/;"	m	class:QuadratureGenerator
getModificationTime	config/BuildSystem/sourceDatabase.py	/^  def getModificationTime(source):$/;"	m	class:SourceDB
getModificationTime	config/BuildSystem/sourceDatabase.py	/^  getModificationTime = staticmethod(getModificationTime)$/;"	v	class:SourceDB
getModifiedPoints	include/sieve/Mesh.hh	/^      const std::set<typename sieve_type::point_type>& getModifiedPoints() const {return this->modifiedPoints;};$/;"	f	class:ALE::IBundle::DepthVisitor
getModifiedPoints	include/sieve/Mesh.hh	/^      const std::set<typename sieve_type::point_type>& getModifiedPoints() const {return this->modifiedPoints;};$/;"	f	class:ALE::IBundle::HeightVisitor
getModule	config/BuildSystem/script.py	/^  def getModule(root, name):$/;"	m	class:Script
getModule	config/BuildSystem/script.py	/^  getModule = staticmethod(getModule)$/;"	v	class:Script
getNLevels	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^int getNLevels() { return C_levels; }$/;"	f	class:ALE::Hierarchy::HierarchyBuilder
getName	config/BuildSystem/config/compile/processor.py	/^  def getName(self):$/;"	m	class:Processor
getName	config/BuildSystem/config/packages/PETSc.py	/^  def getName(self):$/;"	m	class:Configure
getName	config/BuildSystem/project.py	/^  def getName(self):$/;"	m	class:Project
getName	config/PETSc/petsc.py	/^  def getName(self):$/;"	m	class:Configure
getName	include/sieve/ALE_containers.hh	/^    const std::string& getName() const {return this->_name;};$/;"	f	class:ALE::ParallelObject
getName	src/dm/impls/mesh/examples/tests/isection1.cxx	/^  virtual std::string getName() {return "Constant";};$/;"	f	class:StressTestIConstantSection
getName	src/dm/impls/mesh/examples/tests/isection1.cxx	/^  virtual std::string getName() {return "General";};$/;"	f	class:StressTestSection
getName	src/dm/impls/mesh/examples/tests/isection1.cxx	/^  virtual std::string getName() {return "Uniform";};$/;"	f	class:StressTestIUniformSection
getName	src/dm/impls/mesh/examples/tests/section1.cxx	/^  virtual std::string getName() {return "Big Cube";};$/;"	f	class:StressTestBigCubeMeshSection
getName	src/dm/impls/mesh/examples/tests/section1.cxx	/^  virtual std::string getName() {return "Big Square";};$/;"	f	class:StressTestBigSquareMeshSection
getName	src/dm/impls/mesh/examples/tests/section1.cxx	/^  virtual std::string getName() {return "Cube";};$/;"	f	class:StressTestCubeMeshSection
getName	src/dm/impls/mesh/examples/tests/section1.cxx	/^  virtual std::string getName() {return "General";};$/;"	f	class:StressTestGeneralMeshSection
getName	src/dm/impls/mesh/examples/tests/section1.cxx	/^  virtual std::string getName() {return "Non-Interpolated Cube";};$/;"	f	class:StressTestCubeMeshSectionNonInterp
getName	src/dm/impls/mesh/examples/tests/section1.cxx	/^  virtual std::string getName() {return "Square";};$/;"	f	class:StressTestSquareMeshSection
getName	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  virtual std::string getName() {return "Cube";};$/;"	f	class:StressTestCubeSieve
getName	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  virtual std::string getName() {return "General";};$/;"	f	class:StressTestGeneralSieve
getName	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  virtual std::string getName() {return "Square";};$/;"	f	class:StressTestSquareSieve
getNames	config/BuildSystem/config/base.py	/^    def getNames(name, resultName):$/;"	f	function:Configure.getExecutable
getNeighbors	config/BuildSystem/sourceDatabase.py	/^  def getNeighbors(self, source):$/;"	m	class:DependencyAnalyzer
getNeighbors	include/sieve/Partitioner.hh	/^      const neighbors_type *getNeighbors() {return this->neighborCells;};$/;"	f	class:ALE::Partitioner::MeetVisitor
getNewAtlas	include/sieve/Field.hh	/^    const Obj<atlas_type>& getNewAtlas() const {return this->_atlasNew;};$/;"	f	class:ALE::GeneralSection
getNewAtlas	include/sieve/Field.hh	/^    const Obj<atlas_type>& getNewAtlas() {return this->_atlasNew;};$/;"	f	class:ALE::Section
getNewFiles	config/BuildSystem/build/bk.py	/^  def getNewFiles(self, root):$/;"	m	class:Tag
getNewFiles	config/BuildSystem/sourceControl.py	/^  def getNewFiles(self, files):$/;"	m	class:BitKeeper
getNewFiles	config/BuildSystem/sourceControl.py	/^  def getNewFiles(self, files):$/;"	m	class:VersionControl
getNewPoints	include/sieve/IField.hh	/^    const std::set<newpoint_type>& getNewPoints() {return this->newPoints;};$/;"	f	class:ALE::IGeneralSection
getNewTag	include/sieve/BasicCommunication.hh	/^    int getNewTag() const {$/;"	f	class:ALE::MPIMover
getNewTag	include/sieve/Field.hh	/^    int getNewTag() {$/;"	f	class:ALE::Field
getNumAllocations	include/sieve/ALE_mem.hh	/^    long long getNumAllocations() {return getNumAllocations(stageNames.front());};$/;"	f	class:ALE::MemoryLogger
getNumAllocations	include/sieve/ALE_mem.hh	/^    long long getNumAllocations(const std::string& stage) {return stages[stage].first.num;};$/;"	f	class:ALE::MemoryLogger
getNumCellCorners	include/sieve/Mesh.hh	/^    int getNumCellCorners() {$/;"	f	class:ALE::IMesh
getNumCellCorners	include/sieve/Mesh.hh	/^    int getNumCellCorners() {$/;"	f	class:ALE::Mesh
getNumCellCorners	include/sieve/Mesh.hh	/^    int getNumCellCorners(const point_type& p, const int depth = -1) const {$/;"	f	class:ALE::IMesh
getNumCellCorners	include/sieve/Mesh.hh	/^    int getNumCellCorners(const point_type& p, const int depth = -1) const {$/;"	f	class:ALE::Mesh
getNumCells	include/sieve/CartesianSieve.hh	/^    int getNumCells() const {return this->_numCells;};$/;"	f	class:ALE::CartesianSieve
getNumCoefficients	include/sieve/FEMProblem.hh	/^      int getNumCoefficients() {$/;"	f	class:ALE::Problem::GeneralIntegral
getNumDeallocations	include/sieve/ALE_mem.hh	/^    long long getNumDeallocations() {return getNumDeallocations(stageNames.front());};$/;"	f	class:ALE::MemoryLogger
getNumDeallocations	include/sieve/ALE_mem.hh	/^    long long getNumDeallocations(const std::string& stage) {return stages[stage].second.num;};$/;"	f	class:ALE::MemoryLogger
getNumDof	include/sieve/FEMProblem.hh	/^      virtual int           getNumDof(const int dim) {return this->_dim2dof[dim];};$/;"	f	class:ALE::Problem::GeneralDiscretization
getNumDof	include/sieve/Mesh.hh	/^    int  getNumDof(const int dim) {return this->_dim2dof[dim];};$/;"	f	class:ALE::Discretization
getNumPoints	include/sieve/Overlap.hh	/^  index_type getNumPoints() {$/;"	f	class:PETSc::Overlap
getNumPoints	include/sieve/Overlap.hh	/^  index_type getNumPoints(index_type r) {$/;"	f	class:PETSc::Overlap
getNumPointsByRank	include/sieve/Overlap.hh	/^  PetscErrorCode getNumPointsByRank(index_type rank, index_type *numPoints) {$/;"	f	class:PETSc::Overlap
getNumRanks	include/sieve/Overlap.hh	/^  index_type getNumRanks() {$/;"	f	class:PETSc::Overlap
getNumSpaces	include/sieve/Field.hh	/^    int getNumSpaces() const {return 1;};$/;"	f	class:ALE::Section
getNumSpaces	include/sieve/Field.hh	/^    int getNumSpaces() const {return this->_spaces.size();};$/;"	f	class:ALE::FEMSection
getNumSpaces	include/sieve/Field.hh	/^    int getNumSpaces() const {return this->_spaces.size();};$/;"	f	class:ALE::GeneralSection
getNumVertices	include/sieve/CartesianSieve.hh	/^    int getNumVertices() const {return this->_numVertices;};$/;"	f	class:ALE::CartesianSieve
getNumVertices_Zoltan	src/dm/impls/mesh/meshzoltan.c	/^int getNumVertices_Zoltan(void *data, int *ierr)$/;"	f
getNumber	include/sieve/Partitioner.hh	/^      point_type getNumber(const point_type cell) {$/;"	f	class:ALE::Partitioner::MeshManager
getNumbering	include/sieve/INumbering.hh	/^    const Obj<numbering_type>& getNumbering(const Obj<ABundle_>& bundle, const int depth) {$/;"	f	class:ALE::INumberingFactory
getNumbering	include/sieve/INumbering.hh	/^    const Obj<numbering_type>& getNumbering(const Obj<ABundle_>& bundle, const std::string& labelname, const int value) {$/;"	f	class:ALE::INumberingFactory
getNumbering	include/sieve/Numbering.hh	/^    const Obj<numbering_type>& getNumbering(const Obj<ABundle_>& bundle, const int depth) {$/;"	f	class:ALE::NumberingFactory
getNumbering	include/sieve/Numbering.hh	/^    const Obj<numbering_type>& getNumbering(const Obj<ABundle_>& bundle, const std::string& labelname, const int value) {$/;"	f	class:ALE::NumberingFactory
getObjDir	config/builder.py	/^ def getObjDir(self, libname):$/;"	m	class:PETScMaker
getObjectName	config/builder.py	/^  def getObjectName(self, source, objDir = None):$/;"	m	class:SourceFileManager
getOffset	include/sieve/Partitioner.hh	/^      int  getOffset() {return this->offset;}$/;"	f	class:ALE::Partitioner::AdjVisitor
getOppositeVertex	include/sieve/Selection.hh	/^      int getOppositeVertex() {return this->oppositeVertex;};$/;"	f	class:ALE::Selection::FaceVisitor
getOptimizationFlags	config/BuildSystem/build/compile/C.py	/^  def getOptimizationFlags(self, source = None):$/;"	m	class:Compiler
getOptimizationFlags	config/BuildSystem/build/compile/Cxx.py	/^  def getOptimizationFlags(self, source = None):$/;"	m	class:Compiler
getOptimizationFlags	config/BuildSystem/build/compile/F90.py	/^  def getOptimizationFlags(self, source = None):$/;"	m	class:Compiler
getOptimizationFlags	config/BuildSystem/build/processor.py	/^  def getOptimizationFlags(self, source = None):$/;"	m	class:Compiler
getOptimizationFlags	config/BuildSystem/build/processor.py	/^  def getOptimizationFlags(self, source):$/;"	m	class:Archiver
getOptimizationFlags	config/BuildSystem/build/processor.py	/^  def getOptimizationFlags(self, source):$/;"	m	class:DirectoryArchiver
getOptimizationFlags	config/BuildSystem/build/processor.py	/^  def getOptimizationFlags(self, source):$/;"	m	class:Linker
getOptimizationFlags	config/BuildSystem/build/processor.py	/^  def getOptimizationFlags(self, source):$/;"	m	class:SharedLinker
getOptionalFlagsName	config/BuildSystem/config/compilerFlags.py	/^  def getOptionalFlagsName(self, language, compilerOnly = 0):$/;"	m	class:Configure
getOptionsObject	config/BuildSystem/config/compilerFlags.py	/^  def getOptionsObject(self):$/;"	m	class:Configure
getOptionsString	config/BuildSystem/config/framework.py	/^  def getOptionsString(self, omitArgs = []):$/;"	m	class:Framework
getOrientedArrows	include/sieve/ISieve.hh	/^      const oriented_arrow_type *getOrientedArrows() const {return this->oArrows;}$/;"	f	class:ALE::ISieveVisitor::ArrowRetriever
getOrientedFace	include/sieve/Selection.hh	/^    static bool getOrientedFace(const Obj<FlexMesh>& mesh, const point_type& cell, FaceType face,$/;"	f	class:ALE::Selection
getOrientedFace	include/sieve/Selection.hh	/^    static bool getOrientedFace(const Obj<Mesh>& mesh, const point_type& cell, FaceType face,$/;"	f	class:ALE::Selection
getOrientedPoints	include/sieve/ISieve.hh	/^      const oriented_point_type *getOrientedPoints() const {return this->oPoints;}$/;"	f	class:ALE::ISieveVisitor::FilteredPointRetriever
getOrientedPoints	include/sieve/ISieve.hh	/^      const oriented_point_type *getOrientedPoints() const {return this->oPoints;}$/;"	f	class:ALE::ISieveVisitor::PointRetriever
getOrientedSize	include/sieve/ISieve.hh	/^      size_t                     getOrientedSize() const {return this->o;}$/;"	f	class:ALE::ISieveVisitor::ArrowRetriever
getOrientedSize	include/sieve/ISieve.hh	/^      size_t                     getOrientedSize() const {return this->o;}$/;"	f	class:ALE::ISieveVisitor::PointRetriever
getOrientedSize	include/sieve/ISieve.hh	/^      size_t            getOrientedSize() const {return this->o;}$/;"	f	class:ALE::ISieveVisitor::FilteredPointRetriever
getOtherIncludes	config/BuildSystem/config/packages/PETSc.py	/^  def getOtherIncludes(self):$/;"	m	class:Configure
getOtherIncludes	config/PETSc/petsc.py	/^  def getOtherIncludes(self):$/;"	m	class:Configure
getOtherLibs	config/BuildSystem/config/packages/BlasLapack.py	/^  def getOtherLibs(self, foundBlas = None, blasLibrary = None, separateBlas = None):$/;"	m	class:Configure
getOtherLibs	config/BuildSystem/config/packages/PETSc.py	/^  def getOtherLibs(self):$/;"	m	class:Configure
getOtherLibs	config/PETSc/petsc.py	/^  def getOtherLibs(self):$/;"	m	class:Configure
getOutputFlag	config/BuildSystem/config/compile/C.py	/^  def getOutputFlag(self):$/;"	m	class:StaticLinker
getOutputFlags	config/BuildSystem/build/compile/SIDL.py	/^  def getOutputFlags(self, source):$/;"	m	class:Compiler
getOutputFlags	config/BuildSystem/build/processor.py	/^  def getOutputFlags(self, source):$/;"	m	class:Archiver
getOutputFlags	config/BuildSystem/build/processor.py	/^  def getOutputFlags(self, source):$/;"	m	class:Compiler
getOutputFlags	config/BuildSystem/build/processor.py	/^  def getOutputFlags(self, source):$/;"	m	class:DirectoryArchiver
getOutputFlags	config/BuildSystem/build/processor.py	/^  def getOutputFlags(self, source):$/;"	m	class:ImportSharedLinker
getOutputFlags	config/BuildSystem/build/processor.py	/^  def getOutputFlags(self, source):$/;"	m	class:Linker
getPETScArch	config/BuildSystem/config/packages/PETSc.py	/^  def getPETScArch(self, petscDir):$/;"	m	class:Configure
getPETScArch	config/PETSc/petsc.py	/^  def getPETScArch(self, petscDir):$/;"	m	class:Configure
getPETScDirectory	bin/update.py	/^def getPETScDirectory():$/;"	f
getPackageInfo	config/builder.py	/^ def getPackageInfo(self):$/;"	m	class:PETScMaker
getPackages	config/BuildSystem/project.py	/^  def getPackages(self):$/;"	m	class:Project
getPatch	include/sieve/Topology.hh	/^    const Obj<sieve_type>& getPatch(const patch_type& patch) {$/;"	f	class:ALE::Topology
getPatches	include/sieve/Field.hh	/^    const sheaf_type& getPatches() {$/;"	f	class:ALE::Field
getPatches	include/sieve/Topology.hh	/^    const sheaf_type& getPatches() {$/;"	f	class:ALE::Topology
getPath	config/BuildSystem/project.py	/^  def getPath(self, lang):$/;"	m	class:Project
getPeriodicity	include/sieve/Mesh.hh	/^    bool getPeriodicity(const int d) {return this->_periodicity[d];};$/;"	f	class:ALE::IMesh
getPeriodicity	include/sieve/Mesh.hh	/^    bool getPeriodicity(const int d) {return this->_periodicity[d];};$/;"	f	class:ALE::Mesh
getPhysicsRoutines	config/PETSc/FEM.py	/^  def getPhysicsRoutines(self, operator):$/;"	m	class:QuadratureGenerator
getPoint	include/sieve/INumbering.hh	/^    point_type getPoint(const int& index) {return this->_invOrder[index];};$/;"	f	class:ALE::INumbering
getPoint	include/sieve/Numbering.hh	/^    point_type getPoint(const int& index) {return this->_invOrder[index];};$/;"	f	class:ALE::Numbering
getPointInterpolation	src/dm/impls/mesh/examples/tutorials/ex_interpolate_1.c	/^void getPointInterpolation(Mat A, ALE::Obj<ALE::Mesh> mesh, ALE::Mesh::point_type e, double * point)$/;"	f
getPoints	include/sieve/ISieve.hh	/^      const point_type          *getPoints() const {return this->points;}$/;"	f	class:ALE::ISieveVisitor::PointRetriever
getPoints	include/sieve/ISieve.hh	/^      const point_type *getPoints() const {return this->points;}$/;"	f	class:ALE::ISieveVisitor::FilteredPointRetriever
getPoints	include/sieve/ISieve.hh	/^      const std::set<typename Sieve::point_type>& getPoints() const {return this->seen;};$/;"	f	class:ALE::ISieveVisitor::TransitiveClosureVisitor
getPrecisionFlag	config/BuildSystem/config/packages/BlasLapack.py	/^  def getPrecisionFlag(self,cflags):$/;"	m	class:Configure
getPrecisionFlag	config/BuildSystem/config/packages/f2cblaslapack.py	/^  def getPrecisionFlag(self,cflags):$/;"	m	class:Configure
getPrefix	config/BuildSystem/config/framework.py	/^  def getPrefix(self, child):$/;"	m	class:Framework
getPrefix	config/BuildSystem/config/packages/BlasLapack.py	/^  def getPrefix(self):$/;"	m	class:Configure
getPrefix	config/BuildSystem/maker.py	/^  def getPrefix(self):$/;"	m	class:Make
getPreprocessor	config/BuildSystem/config/base.py	/^  def getPreprocessor(self):$/;"	m	class:Configure
getPreprocessorCmd	config/BuildSystem/config/base.py	/^  def getPreprocessorCmd(self):$/;"	m	class:Configure
getPreprocessorFlagsArg	config/BuildSystem/config/base.py	/^  def getPreprocessorFlagsArg(self):$/;"	m	class:Configure
getPreprocessorFlagsName	config/BuildSystem/config/base.py	/^  def getPreprocessorFlagsName(self, language):$/;"	m	class:Configure
getPreprocessorObject	config/BuildSystem/build/templates/usingC.py	/^  def getPreprocessorObject(self, language):$/;"	m	class:UsingC
getPreprocessorObject	config/BuildSystem/build/templates/usingCxx.py	/^  def getPreprocessorObject(self, language):$/;"	m	class:UsingCxx
getPreprocessorObject	config/BuildSystem/script.py	/^  def getPreprocessorObject(self, language):$/;"	m	class:LanguageProcessor
getProcessor	config/BuildSystem/build/processor.py	/^  def getProcessor(self):$/;"	m	class:Linker
getProcessor	config/BuildSystem/build/processor.py	/^  def getProcessor(self):$/;"	m	class:Processor
getProcessor	config/BuildSystem/config/compile/processor.py	/^  def getProcessor(self):$/;"	m	class:Processor
getProjectCompileGraph	config/BuildSystem/build/framework.py	/^  def getProjectCompileGraph(self, forceRebuild = 0):$/;"	m	class:Framework
getProjectRoot	config/BuildSystem/build/fileset.py	/^  def getProjectRoot(self):$/;"	m	class:RootedFileSet
getProjectUrl	config/BuildSystem/build/fileset.py	/^  def getProjectUrl(self):$/;"	m	class:RootedFileSet
getPythonFile	config/BuildSystem/maker.py	/^  def getPythonFile(self, mod, defaultFile = None):$/;"	m	class:Make
getPythonPath	config/BuildSystem/pythonpath.py	/^def getPythonPath():$/;"	f
getQuadratureBlock	config/PETSc/FEM.py	/^  def getQuadratureBlock(self, num):$/;"	m	class:QuadratureGenerator
getQuadratureFile	config/PETSc/FEM.py	/^  def getQuadratureFile(self, filename, decls):$/;"	m	class:QuadratureGenerator
getQuadraturePoints	include/sieve/Mesh.hh	/^    const PetscReal *getQuadraturePoints() {return this->_points;};$/;"	f	class:ALE::Discretization
getQuadratureSetup	config/PETSc/FEM.py	/^  def getQuadratureSetup(self):$/;"	m	class:QuadratureGenerator
getQuadratureSize	include/sieve/FEMProblem.hh	/^      virtual const int     getQuadratureSize() {return this->_quadSize;};$/;"	f	class:ALE::Problem::GeneralDiscretization
getQuadratureSize	include/sieve/Mesh.hh	/^    int           getQuadratureSize() {return this->_quadSize;};$/;"	f	class:ALE::Discretization
getQuadratureStructs	config/PETSc/FEM.py	/^  def getQuadratureStructs(self, degree, quadrature, num, tensor = 0):$/;"	m	class:QuadratureGenerator
getQuadratureStructsInline	config/PETSc/FEM.py	/^  def getQuadratureStructsInline(self, degree, quadrature, num, tensor = 0):$/;"	m	class:QuadratureGenerator
getQuadratureWeights	include/sieve/Mesh.hh	/^    const PetscReal *getQuadratureWeights() {return this->_weights;};$/;"	f	class:ALE::Discretization
getRHSFunction	include/sieve/UFCProblem.hh	/^      ufc::function * getRHSFunction() {$/;"	f	class:ALE::Problem::UFCDiscretization
getRank	include/sieve/Overlap.hh	/^  PetscErrorCode getRank(index_type r, index_type *rank) {$/;"	f	class:PETSc::Overlap
getRankIndex	include/sieve/Overlap.hh	/^  PetscErrorCode getRankIndex(index_type rank, index_type *rankIndex) {$/;"	f	class:PETSc::Overlap
getRanks	include/sieve/Overlap.hh	/^  void getRanks(point_type point, index_type *size, const rank_type **ranks, const point_type **remotePoints) {$/;"	f	class:PETSc::Overlap
getRanlib	config/BuildSystem/config/compile/C.py	/^  def getRanlib(self):$/;"	m	class:StaticLinker
getRawArray	include/sieve/Field.hh	/^    value_type *getRawArray(const int size) {$/;"	f	class:ALE::FEMSection
getRawArray	include/sieve/Field.hh	/^    value_type *getRawArray(const int size) {$/;"	f	class:ALE::GeneralSection
getRawArray	include/sieve/Field.hh	/^    value_type *getRawArray(const int size) {$/;"	f	class:ALE::NewUniformSection
getRawArray	include/sieve/Field.hh	/^    value_type *getRawArray(const int size) {$/;"	f	class:ALE::Section
getRawArray	include/sieve/Field.hh	/^    value_type *getRawArray(const int size) {$/;"	f	class:ALE::UniformSection
getRawArray	include/sieve/IField.hh	/^    value_type *getRawArray(const int size) {$/;"	f	class:ALE::IUniformSection
getRawArray	include/sieve/Sections.hh	/^    value_type *getRawArray(const int size) {$/;"	f	class:ALE::ConeSection
getRealCoordinates	config/PETSc/FEM.py	/^  def getRealCoordinates(self, dimVar, v0Var, JVar, coordsVar):$/;"	m	class:QuadratureGenerator
getRealSection	include/sieve/CartesianSieve.hh	/^    const Obj<real_section_type>& getRealSection(const std::string& name) {$/;"	f	class:ALE::CartesianBundle
getRealSection	include/sieve/Mesh.hh	/^    const Obj<real_section_type>& getRealSection(const std::string& name) {$/;"	f	class:ALE::Bundle
getRealSection	include/sieve/Mesh.hh	/^    const Obj<real_section_type>& getRealSection(const std::string& name) {$/;"	f	class:ALE::IBundle
getRealSections	include/sieve/CartesianSieve.hh	/^    Obj<std::set<std::string> > getRealSections() const {$/;"	f	class:ALE::CartesianBundle
getRealSections	include/sieve/Mesh.hh	/^    Obj<std::set<std::string> > getRealSections() const {$/;"	f	class:ALE::Bundle
getRealSections	include/sieve/Mesh.hh	/^    Obj<std::set<std::string> > getRealSections() const {$/;"	f	class:ALE::IBundle
getRecvOverlap	include/sieve/CartesianSieve.hh	/^    const Obj<recv_overlap_type>& getRecvOverlap() const {return this->_recvOverlap;};$/;"	f	class:ALE::CartesianBundle
getRecvOverlap	include/sieve/Mesh.hh	/^    const Obj<recv_overlap_type>& getRecvOverlap() const {return this->_recvOverlap;};$/;"	f	class:ALE::Bundle
getRecvOverlap	include/sieve/Mesh.hh	/^    const Obj<recv_overlap_type>& getRecvOverlap() const {return this->_recvOverlap;};$/;"	f	class:ALE::IMesh
getRecvOverlap	include/sieve/Topology.hh	/^    const Obj<recv_overlap_type>& getRecvOverlap() const {return this->_recvOverlap;};$/;"	f	class:ALE::Topology
getReferenceTensor	config/PETSc/FEM.py	/^  def getReferenceTensor(self, element, quadrature):$/;"	m	class:QuadratureGenerator
getRegressionParameters	config/builder.py	/^def getRegressionParameters(maker, exampleDir):$/;"	f
getRelativePath	config/BuildSystem/sourceDatabase.py	/^  def getRelativePath(self, path):$/;"	m	class:SourceDB
getRemoteRenumbering	include/sieve/ParallelMapping.hh	/^    remote_renumbering_type& getRemoteRenumbering() {$/;"	f	class:ALE::PointFactory
getRenumbering	include/sieve/Mesh.hh	/^    renumbering_type& getRenumbering() {return this->_renumbering;};$/;"	f	class:ALE::Bundle
getRenumbering	include/sieve/Mesh.hh	/^    renumbering_type& getRenumbering() {return this->_renumbering;};$/;"	f	class:ALE::IBundle
getRenumbering	include/sieve/ParallelMapping.hh	/^    renumbering_type& getRenumbering() {$/;"	f	class:ALE::PointFactory
getReorder	include/sieve/FEMProblem.hh	/^      virtual const int * getReorder() {$/;"	f	class:ALE::Problem::GeneralBoundaryCondition
getReorder	include/sieve/FEMProblem.hh	/^      virtual const int * getReorder() {$/;"	f	class:ALE::Problem::GeneralDiscretization
getReorder	include/sieve/FEMProblem.hh	/^      virtual const int * getReorder() {$/;"	f	class:ALE::Problem::GeneralIntegral
getReorder	include/sieve/FEMProblem.hh	/^      virtual const int * getReorder() {$/;"	f	class:ALE::Problem::GenericFormSubProblem
getReorder	include/sieve/UFCProblem.hh	/^      virtual const int * getReorder() {$/;"	f	class:ALE::Problem::UFCBoundaryCondition
getReorder	include/sieve/UFCProblem.hh	/^      virtual const int * getReorder() {$/;"	f	class:ALE::Problem::UFCDiscretization
getRoot	config/BuildSystem/logger.py	/^  def getRoot(self):$/;"	m	class:Logger
getRoot	config/BuildSystem/project.py	/^  def getRoot(self):$/;"	m	class:Project
getRoots	config/BuildSystem/build/buildGraph.py	/^  def getRoots(graph):$/;"	m	class:BuildGraph
getRoots	config/BuildSystem/build/buildGraph.py	/^  getRoots = staticmethod(getRoots)$/;"	v	class:BuildGraph
getRoots	config/BuildSystem/graph.py	/^  def getRoots(graph):$/;"	m	class:DirectedGraph
getRoots	config/BuildSystem/graph.py	/^  getRoots = staticmethod(getRoots)$/;"	v	class:DirectedGraph
getRuntimeIncludes	config/BuildSystem/build/templates/usingSIDL.py	/^  def getRuntimeIncludes(self):$/;"	m	class:UsingSIDL
getRuntimeLanguage	config/BuildSystem/build/templates/usingSIDL.py	/^  def getRuntimeLanguage(self):$/;"	m	class:UsingSIDL
getRuntimeLibraries	config/BuildSystem/build/templates/usingSIDL.py	/^  def getRuntimeLibraries(self):$/;"	m	class:UsingSIDL
getRuntimePackage	config/BuildSystem/build/templates/usingSIDL.py	/^  def getRuntimePackage(self):$/;"	m	class:UsingSIDL
getRuntimeProject	config/BuildSystem/build/templates/usingSIDL.py	/^  def getRuntimeProject(self):$/;"	m	class:UsingSIDL
getSIDLClientDirectory	config/BuildSystem/maker.py	/^  def getSIDLClientDirectory(self, builder, sidlFile, language):$/;"	m	class:SIDLMake
getSIDLDLLMap	config/BuildSystem/sidldllpath.py	/^def getSIDLDLLMap():$/;"	f
getSIDLDLLPath	config/BuildSystem/sidldllpath.py	/^def getSIDLDLLPath():$/;"	f
getSIDLServerDirectory	config/BuildSystem/maker.py	/^  def getSIDLServerDirectory(self, builder, sidlFile, language):$/;"	m	class:SIDLMake
getSIDLTemplate	config/BuildSystem/build/framework.py	/^  def getSIDLTemplate(self):$/;"	m	class:Framework
getSearchDirectories	config/BuildSystem/config/package.py	/^  def getSearchDirectories(self):$/;"	m	class:Package
getSearchDirectories	config/BuildSystem/config/packages/MPI.py	/^  def getSearchDirectories(self):$/;"	m	class:Configure
getSearchDirectories	config/BuildSystem/config/packages/boost.py	/^  def getSearchDirectories(self):$/;"	m	class:Configure
getSearchDirectories	config/BuildSystem/config/packages/cusp.py	/^  def getSearchDirectories(self):$/;"	m	class:Configure
getSearchDirectories	config/BuildSystem/config/packages/thrust.py	/^  def getSearchDirectories(self):$/;"	m	class:Configure
getSearchDirectories	config/PETSc/packages/Sieve.py	/^  def getSearchDirectories(self):$/;"	m	class:Configure
getSearchDirectories	config/PETSc/packages/X.py	/^  def getSearchDirectories(self):$/;"	m	class:Configure
getSearchDirectories	config/PETSc/packages/afterimage.py	/^  def getSearchDirectories(self):$/;"	m	class:Configure
getSearchDirectories	config/PETSc/packages/cuda.py	/^  def getSearchDirectories(self):$/;"	m	class:Configure
getSearchDirectories	config/PETSc/packages/glut.py	/^  def getSearchDirectories(self):$/;"	m	class:Configure
getSearchDirectories	config/PETSc/packages/opengl.py	/^  def getSearchDirectories(self):$/;"	m	class:Configure
getSearchDirectories	config/PETSc/packages/pami.py	/^  def getSearchDirectories(self):$/;"	m	class:Configure
getSearchDirectories	config/PETSc/packages/pthread.py	/^  def getSearchDirectories(self):$/;"	m	class:Configure
getSearchDirectories	config/PETSc/packages/txpetscgpu.py	/^  def getSearchDirectories(self):$/;"	m	class:Configure
getSearchDirectories	config/PETSc/packages/valgrind.py	/^  def getSearchDirectories(self):$/;"	m	class:Configure
getSection	include/sieve/Field.hh	/^    Obj<section_type>& getSection(const patch_type& patch) {$/;"	f	class:ALE::Field
getSection	include/sieve/Sections.hh	/^      const Obj<section_type>& getSection(const patch_type& patch) {$/;"	f	class:ALE::New::ConeSizeSection
getSectionSetup	config/PETSc/FEM.py	/^  def getSectionSetup(self, n, element):$/;"	m	class:QuadratureGenerator
getSendOverlap	include/sieve/CartesianSieve.hh	/^    const Obj<send_overlap_type>& getSendOverlap() const {return this->_sendOverlap;};$/;"	f	class:ALE::CartesianBundle
getSendOverlap	include/sieve/Mesh.hh	/^    const Obj<send_overlap_type>& getSendOverlap() const {return this->_sendOverlap;};$/;"	f	class:ALE::Bundle
getSendOverlap	include/sieve/Mesh.hh	/^    const Obj<send_overlap_type>& getSendOverlap() const {return this->_sendOverlap;};$/;"	f	class:ALE::IMesh
getSendOverlap	include/sieve/Topology.hh	/^    const Obj<send_overlap_type>& getSendOverlap() const {return this->_sendOverlap;};$/;"	f	class:ALE::Topology
getServerAddr	config/BuildSystem/RDict.py	/^  def getServerAddr(self, dir):$/;"	m	class:RDict
getServerCompileTarget	config/BuildSystem/build/templates/usingCxx.py	/^  def getServerCompileTarget(self, package):$/;"	m	class:UsingCxx
getServerCompileTarget	config/BuildSystem/build/templates/usingPython.py	/^  def getServerCompileTarget(self, package):$/;"	m	class:UsingPython
getServerLanguages	config/BuildSystem/maker.py	/^  def getServerLanguages(self):$/;"	m	class:SIDLMake
getServerLibrary	config/BuildSystem/build/templates/usingCxx.py	/^  def getServerLibrary(self, package, proj = None, lang = None):$/;"	m	class:UsingCxx
getServerLibrary	config/BuildSystem/build/templates/usingPython.py	/^  def getServerLibrary(self, package, proj = None, lang = None):$/;"	m	class:UsingPython
getServerLibrary	config/BuildSystem/build/templates/usingSIDL.py	/^  def getServerLibrary(self, projectName, lang, package, isShared = 0):$/;"	m	class:UsingSIDL
getServerRootDir	config/BuildSystem/build/templates/usingSIDL.py	/^  def getServerRootDir(self, lang, package):$/;"	m	class:UsingSIDL
getServerTarget	config/BuildSystem/build/templates/Compile.py	/^  def getServerTarget(self, lang, package):$/;"	m	class:Template
getServerTarget	config/BuildSystem/build/templates/SIDL.py	/^  def getServerTarget(self, lang):$/;"	m	class:Template
getServerTargets	config/BuildSystem/build/templates/Compile.py	/^  def getServerTargets(self, isStatic = 0):$/;"	m	class:Template
getServerTargets	config/BuildSystem/build/templates/SIDL.py	/^  def getServerTargets(self):$/;"	m	class:Template
getSharedFlag	config/BuildSystem/config/packages/BlasLapack.py	/^  def getSharedFlag(self,cflags):$/;"	m	class:Configure
getSharedFlag	config/BuildSystem/config/packages/f2cblaslapack.py	/^  def getSharedFlag(self,cflags):$/;"	m	class:Configure
getSharedLinker	config/BuildSystem/config/base.py	/^  def getSharedLinker(self):$/;"	m	class:Configure
getSharedLinkerCmd	config/BuildSystem/config/base.py	/^  def getSharedLinkerCmd(self):$/;"	m	class:Configure
getSharedLinkerFlags	config/BuildSystem/config/base.py	/^  def getSharedLinkerFlags(self):$/;"	m	class:Configure
getSharedLinkerObject	config/BuildSystem/script.py	/^  def getSharedLinkerObject(self, language):$/;"	m	class:LanguageProcessor
getShortLibName	config/BuildSystem/config/libraries.py	/^  def getShortLibName(self,lib):$/;"	m	class:Configure
getSidl	config/BuildSystem/maker.py	/^  def getSidl(self):$/;"	m	class:SIDLMake
getSieve	include/sieve/CartesianSieve.hh	/^    const Obj<sieve_type>& getSieve() const {return this->_sieve;};$/;"	f	class:ALE::CartesianBundle
getSieve	include/sieve/Mesh.hh	/^    const Obj<sieve_type>& getSieve() const {return this->_sieve;};$/;"	f	class:ALE::Bundle
getSieve	include/sieve/Mesh.hh	/^    const Obj<sieve_type>& getSieve() const {return this->_sieve;};$/;"	f	class:ALE::IBundle
getSize	include/sieve/ISieve.hh	/^      int  getSize() const {return this->i;};$/;"	f	class:ALE::ISieveVisitor::IndicesVisitor
getSize	include/sieve/ISieve.hh	/^      int  getSize() const {return this->i;};$/;"	f	class:ALE::ISieveVisitor::RestrictVecVisitor
getSize	include/sieve/ISieve.hh	/^      int  getSize() const {return this->i;};$/;"	f	class:ALE::ISieveVisitor::RestrictVisitor
getSize	include/sieve/ISieve.hh	/^      int getSize() {return this->size;};$/;"	f	class:ALE::ISieveVisitor::SizeVisitor
getSize	include/sieve/ISieve.hh	/^      int getSize() {return this->size;};$/;"	f	class:ALE::ISieveVisitor::SizeWithBCVisitor
getSize	include/sieve/ISieve.hh	/^      size_t                     getSize() const {return this->i;}$/;"	f	class:ALE::ISieveVisitor::ArrowRetriever
getSize	include/sieve/ISieve.hh	/^      size_t                     getSize() const {return this->i;}$/;"	f	class:ALE::ISieveVisitor::PointRetriever
getSize	include/sieve/ISieve.hh	/^      size_t            getSize() const {return this->i;}$/;"	f	class:ALE::ISieveVisitor::FilteredPointRetriever
getSizes	include/sieve/CartesianSieve.hh	/^    const int *getSizes() const {return this->_sizes;};$/;"	f	class:ALE::CartesianSieve
getSourceFileName	config/BuildSystem/build/processor.py	/^  def getSourceFileName(self, object):$/;"	m	class:Processor
getSpaceComponents	include/sieve/Field.hh	/^    int getSpaceComponents(const int space) {return this->_comps[space];};$/;"	f	class:ALE::GeneralSection
getSpaceDimension	include/sieve/FEMProblem.hh	/^      virtual int getSpaceDimension() {$/;"	f	class:ALE::Problem::GeneralIntegral
getSpaces	include/sieve/Field.hh	/^    const std::vector<Obj<atlas_type> >& getSpaces() {return this->_spaces;};$/;"	f	class:ALE::FEMSection
getSpaces	include/sieve/Field.hh	/^    const std::vector<Obj<atlas_type> >& getSpaces() {return this->_spaces;};$/;"	f	class:ALE::GeneralSection
getSplicers	config/BuildSystem/getsplicers.py	/^def getSplicers(directories):$/;"	f
getSplicersDir	config/BuildSystem/getsplicers.py	/^def getSplicersDir(splicedimpls,dir,names):$/;"	f
getStorageSize	include/sieve/Field.hh	/^    int getStorageSize() const {$/;"	f	class:ALE::FEMSection
getStorageSize	include/sieve/Field.hh	/^    int getStorageSize() const {$/;"	f	class:ALE::GeneralSection
getStorageSize	include/sieve/Field.hh	/^    int getStorageSize() const {$/;"	f	class:ALE::Section
getStratification	include/sieve/Sieve.hh	/^      bool getStratification() {return this->doStratify;};$/;"	f	class:ALE::Sieve
getSubstitutionPrefix	config/BuildSystem/config/framework.py	/^  def getSubstitutionPrefix(self, child):$/;"	m	class:Framework
getSupportOffsets	include/sieve/ISieve.hh	/^    offsets_type      getSupportOffsets() {return this->supportOffsets;};$/;"	f	class:ALE::IFSieve
getSupportSize	include/sieve/ISieve.hh	/^    index_type getSupportSize(const point_type& p) const {$/;"	f	class:ALE::IFSieve
getSupportSize	include/sieve/Overlap.hh	/^  int getSupportSize(rank_type rank) {$/;"	f	class:PETSc::RecvOverlap
getSupportSize	include/sieve/Overlap.hh	/^  int getSupportSize(rank_type rank, point_type remotePoint) {$/;"	f	class:PETSc::RecvOverlap
getSupportSize	include/sieve/Sifter.hh	/^    int getSupportSize(const typename traits::source_type& p) {$/;"	f	class:ALE::ASifter
getSupportSize	include/sieve/Sifter.hh	/^    int getSupportSize(const typename traits::source_type& p, const typename traits::color_type& color) {$/;"	f	class:ALE::ASifter
getSupports	include/sieve/ISieve.hh	/^    supports_type     getSupports() {return this->supports;};$/;"	f	class:ALE::IFSieve
getTag	include/sieve/Field.hh	/^    int getTag() const {return this->_tag;};$/;"	f	class:ALE::Field
getTarget	config/BuildSystem/build/templates/Compile.py	/^  def getTarget(self):$/;"	m	class:Template
getTarget	config/BuildSystem/build/templates/SIDL.py	/^  def getTarget(self, forceRebuild = 0):$/;"	m	class:Template
getTarget	config/BuildSystem/config/compile/C.py	/^  def getTarget(self, source):$/;"	m	class:Compiler
getTarget	config/BuildSystem/config/compile/C.py	/^  def getTarget(self, source, shared):$/;"	m	class:Linker
getTarget	config/BuildSystem/config/compile/C.py	/^  def getTarget(self, source, shared):$/;"	m	class:StaticLinker
getTarget	config/BuildSystem/config/compile/C.py	/^  def getTarget(self, source, shared, prefix = 'lib'):$/;"	m	class:DynamicLinker
getTarget	config/BuildSystem/config/compile/C.py	/^  def getTarget(self, source, shared, prefix = 'lib'):$/;"	m	class:SharedLinker
getTarget	config/BuildSystem/config/compile/CUDA.py	/^  def getTarget(self, source):$/;"	m	class:Compiler
getTarget	config/BuildSystem/config/compile/Cxx.py	/^  def getTarget(self, source):$/;"	m	class:Compiler
getTarget	config/BuildSystem/config/compile/Cxx.py	/^  def getTarget(self, source, shared):$/;"	m	class:Linker
getTarget	config/BuildSystem/config/compile/Cxx.py	/^  def getTarget(self, source, shared, prefix = 'lib'):$/;"	m	class:SharedLinker
getTarget	config/BuildSystem/config/compile/FC.py	/^  def getTarget(self, source):$/;"	m	class:Compiler
getTarget	config/BuildSystem/config/compile/FC.py	/^  def getTarget(self, source, shared):$/;"	m	class:Linker
getTarget	config/BuildSystem/config/compile/SIDL.py	/^  def getTarget(self, source):$/;"	m	class:Compiler
getTarget	config/BuildSystem/config/compile/processor.py	/^  def getTarget(self, source, shared = 0):$/;"	m	class:Processor
getTargets	config/builder.py	/^  def getTargets(self, text):$/;"	m	class:MakeParser
getTauFlags	bin/taucc.py	/^def getTauFlags(tau_lib_dir):$/;"	f
getTemporary	config/BuildSystem/nargs.py	/^  def getTemporary(self):$/;"	m	class:Arg
getTensorBasisFuncOrder	config/PETSc/FEM.py	/^  def getTensorBasisFuncOrder(self, element, dim):$/;"	m	class:QuadratureGenerator
getTensorRank	include/sieve/FEMProblem.hh	/^      virtual int getTensorRank() {$/;"	f	class:ALE::Problem::GeneralIntegral
getTestCommand	config/builder.py	/^ def getTestCommand(self, executable, **params):$/;"	m	class:PETScMaker
getTextSizes	config/BuildSystem/help.py	/^  def getTextSizes(self):$/;"	m	class:Info
getTitle	config/BuildSystem/help.py	/^  def getTitle(self):$/;"	m	class:Info
getTmpDir	config/BuildSystem/config/base.py	/^  def getTmpDir(self):$/;"	m	class:Configure
getTmpDir	config/BuildSystem/config/framework.py	/^  def getTmpDir(self):$/;"	m	class:Framework
getType	config/BuildSystem/RDict.py	/^  def getType(self, key):$/;"	m	class:RDict
getType	include/sieve/BasicCommunication.hh	/^    MPI_Datatype getType() {return this->_datatype;};$/;"	f	class:ALE::MPIMover
getUnchangedFiles	config/BuildSystem/build/bk.py	/^  def getUnchangedFiles(self, root):$/;"	m	class:Tag
getUnchangedFiles	config/BuildSystem/sourceControl.py	/^  def getUnchangedFiles(self, files):$/;"	m	class:BitKeeper
getUnchangedFiles	config/BuildSystem/sourceControl.py	/^  def getUnchangedFiles(self, files):$/;"	m	class:VersionControl
getUnconstrainedIndices	include/sieve/ISieve.hh	/^      void getUnconstrainedIndices(const point_type& p, const int orientation) {$/;"	f	class:ALE::ISieveVisitor::IndicesVisitor
getUnlockedFiles	config/BuildSystem/build/bk.py	/^  def getUnlockedFiles(self, root):$/;"	m	class:Tag
getUrl	config/BuildSystem/project.py	/^  def getUrl(self):$/;"	m	class:Project
getUsing	config/BuildSystem/build/templates/Compile.py	/^  def getUsing(self, name):$/;"	m	class:Template
getValue	config/BuildSystem/nargs.py	/^  def getValue(self):$/;"	m	class:Arg
getValue	config/BuildSystem/nargs.py	/^  def getValue(self):$/;"	m	class:ArgDir
getValue	config/BuildSystem/nargs.py	/^  def getValue(self):$/;"	m	class:ArgDirList
getValue	config/BuildSystem/nargs.py	/^  def getValue(self):$/;"	m	class:ArgExecutable
getValue	config/BuildSystem/nargs.py	/^  def getValue(self):$/;"	m	class:ArgLibrary
getValue	include/sieve/CartesianSieve.hh	/^    static inline int getValue(const int dim, const int sizes[], const int indices[], const int code[], const bool forward = true) {$/;"	f	namespace:ALE::CartesianSieveDef
getValue	include/sieve/Mesh.hh	/^      int getValue() const {return this->value;};$/;"	f	class:ALE::IBundle::LabelVisitor
getValue	include/sieve/Mesh.hh	/^    int getValue (const Obj<label_type>& label, const point_type& point, const int defValue = 0) {$/;"	f	class:ALE::Bundle
getValue	include/sieve/Mesh.hh	/^    int getValue (const Obj<label_type>& label, const point_type& point, const int defValue = 0) {$/;"	f	class:ALE::IBundle
getValue	include/sieve/Topology.hh	/^    int getValue (const Obj<patch_label_type>& label, const point_type& point, const int defValue = 0) {$/;"	f	class:ALE::Topology
getValues	include/sieve/ISieve.hh	/^      const value_type *getValues() const {return this->values;};$/;"	f	class:ALE::ISieveVisitor::IndicesVisitor
getValues	include/sieve/ISieve.hh	/^      const value_type *getValues() const {return this->values;};$/;"	f	class:ALE::ISieveVisitor::RestrictVisitor
getValues	include/sieve/ISieve.hh	/^      const value_type *getValues() {$/;"	f	class:ALE::ISieveVisitor::RestrictVecVisitor
getVerbosity	src/dm/impls/mesh/ALE.cxx	/^  int  getVerbosity() {return ALE::verbosity;};$/;"	f	namespace:ALE
getVersion	config/BuildSystem/config/packages/PETSc.py	/^  def getVersion(self):$/;"	m	class:Configure
getVersion	config/PETSc/petsc.py	/^  def getVersion(self):$/;"	m	class:Configure
getVertexNumbering	include/petscdmmesh_viewers.hh	/^  static Obj<typename Mesh::numbering_type> getVertexNumbering(const Obj<Mesh>& mesh) {$/;"	f	class:VTKXMLViewer
getWarningFlags	config/BuildSystem/build/compile/C.py	/^  def getWarningFlags(self, source = None):$/;"	m	class:Compiler
getWarningFlags	config/BuildSystem/build/compile/Cxx.py	/^  def getWarningFlags(self, source = None):$/;"	m	class:Compiler
getWarningFlags	config/BuildSystem/build/compile/F90.py	/^  def getWarningFlags(self, source = None):$/;"	m	class:Compiler
getWarningFlags	config/BuildSystem/build/processor.py	/^  def getWarningFlags(self, source = None):$/;"	m	class:Compiler
getWebDirectory	config/BuildSystem/project.py	/^  def getWebDirectory(self):$/;"	m	class:Project
getWindowsNonOptFlags	config/BuildSystem/config/packages/BlasLapack.py	/^  def getWindowsNonOptFlags(self,cflags):$/;"	m	class:Configure
getWindowsNonOptFlags	config/BuildSystem/config/packages/f2cblaslapack.py	/^  def getWindowsNonOptFlags(self,cflags):$/;"	m	class:Configure
get_conf	bin/pythonscripts/petsc_conf.py	/^def get_conf():$/;"	f
get_field_info	include/web/AMS.py	/^    def get_field_info(self,field, func = null):$/;"	m	class:AMS_Memory
get_field_list	include/web/AMS.py	/^    def get_field_list(self,func = null):$/;"	m	class:AMS_Memory
get_line	config/BuildSystem/patch.py	/^    def get_line():$/;"	f	function:PatchSet.patch_stream
get_memory_list	include/web/AMS.py	/^    def get_memory_list(self,func = null):$/;"	m	class:AMS_Comm
getaggregates	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*getaggregates)(DM,DM,Mat*);$/;"	m	struct:_DMOps
getarray	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*getarray)(Vec,PetscScalar**);            \/* get data array *\/$/;"	m	struct:_VecOps
getarrayread	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*getarrayread)(Vec,const PetscScalar**);$/;"	m	struct:_VecOps
getcoloring	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*getcoloring)(DM,ISColoringType,MatType,ISColoring*);$/;"	m	struct:_DMOps
getcolumnij	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getcolumnij)(Mat,PetscInt,PetscBool ,PetscBool ,PetscInt*,const PetscInt *[],const PetscInt *[],PetscBool  *);$/;"	m	struct:_MatOps
getcolumnnorms	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getcolumnnorms)(Mat,NormType,PetscReal*);$/;"	m	struct:_MatOps
getcolumnvector	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getcolumnvector)(Mat,Vec,PetscInt);$/;"	m	struct:_MatOps
getcomm	include/petsc-private/petscimpl.h	/^   PetscErrorCode (*getcomm)(PetscObject,MPI_Comm *);$/;"	m	struct:__anon11
getconfFunction	config/PETSc/utilities/cacheDetails.py	/^  def getconfFunction(self, a):$/;"	m	class:Configure
getdiagonal	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getdiagonal)(Mat,Vec);$/;"	m	struct:_MatOps
getfactoredmatrix	include/petsc-private/pcimpl.h	/^  PetscErrorCode (*getfactoredmatrix)(PC,Mat*);$/;"	m	struct:_PCOps
getfile	bin/urlget.py	/^    def getfile(filename):$/;"	m	class:url_object
getfile	bin/urlget.py	/^    def getfile(self,outfilename):$/;"	m	class:ftp_object
getfile	bin/urlget.py	/^    def getfile(self,outfilename):$/;"	m	class:http_object
getfile	bin/urlget.py	/^    def getfile(self,outfilename):$/;"	m	class:local_object
getghosts	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getghosts)(Mat,PetscInt*,const PetscInt *[]);$/;"	m	struct:_MatOps
getindices	include/petsc-private/isimpl.h	/^  PetscErrorCode (*getindices)(IS,const PetscInt*[]);$/;"	m	struct:_ISOps
getinertia	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getinertia)(Mat,PetscInt*,PetscInt*,PetscInt*);$/;"	m	struct:_MatOps
getinfo	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getinfo)(Mat,MatInfoType,MatInfo*);$/;"	m	struct:_MatOps
getinjection	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*getinjection)(DM,DM,VecScatter*);$/;"	m	struct:_DMOps
getlocalsize	include/petsc-private/isimpl.h	/^  PetscErrorCode (*getlocalsize)(IS,PetscInt*);$/;"	m	struct:_ISOps
getlocalsize	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*getlocalsize)(Vec,PetscInt*);$/;"	m	struct:_VecOps
getlocalsubmatrix	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getlocalsubmatrix)(Mat,IS,IS,Mat*);$/;"	m	struct:_MatOps
getlocaltoglobalmapping	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*getlocaltoglobalmapping)(DM);$/;"	m	struct:_DMOps
getlocaltoglobalmappingblock	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*getlocaltoglobalmappingblock)(DM);$/;"	m	struct:_DMOps
getmousebutton	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*getmousebutton)(PetscDraw,PetscDrawButton*,PetscReal *,PetscReal *,PetscReal*,PetscReal*);$/;"	m	struct:_PetscDrawOps
getmultiprocblock	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getmultiprocblock)(Mat,MPI_Comm,MatReuse,Mat*);$/;"	m	struct:_MatOps
getpopup	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*getpopup)(PetscDraw,PetscDraw*);$/;"	m	struct:_PetscDrawOps
getrank	include/petsc-private/threadcommimpl.h	/^  PetscErrorCode (*getrank)(PetscInt*);$/;"	m	struct:_PetscThreadCommOps
getredundantmatrix	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getredundantmatrix)(Mat,PetscInt,MPI_Comm,PetscInt,MatReuse,Mat*);$/;"	m	struct:_MatOps
getrow	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getrow)(Mat,PetscInt,PetscInt *,PetscInt*[],PetscScalar*[]);$/;"	m	struct:_MatOps
getrowij	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getrowij)(Mat,PetscInt,PetscBool ,PetscBool ,PetscInt*,const PetscInt *[],const PetscInt *[],PetscBool  *);$/;"	m	struct:_MatOps
getrowmax	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getrowmax)(Mat,Vec,PetscInt[]);$/;"	m	struct:_MatOps
getrowmaxabs	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getrowmaxabs)(Mat,Vec,PetscInt[]);$/;"	m	struct:_MatOps
getrowmin	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getrowmin)(Mat,Vec,PetscInt[]);$/;"	m	struct:_MatOps
getrowminabs	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getrowminabs)(Mat,Vec,PetscInt[]);$/;"	m	struct:_MatOps
getrowuppertriangular	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getrowuppertriangular)(Mat);$/;"	m	struct:_MatOps
getseqnonzerostructure	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getseqnonzerostructure)(Mat,Mat *);$/;"	m	struct:_MatOps
getsingleton	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*getsingleton)(PetscDraw,PetscDraw*);$/;"	m	struct:_PetscDrawOps
getsingleton	include/petsc-private/viewerimpl.h	/^   PetscErrorCode (*getsingleton)(PetscViewer,PetscViewer*);$/;"	m	struct:_PetscViewerOps
getsize	include/petsc-private/isimpl.h	/^  PetscErrorCode (*getsize)(IS,PetscInt*);$/;"	m	struct:_ISOps
getsize	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*getsize)(Vec,PetscInt*);$/;"	m	struct:_VecOps
getsplicers	config/BuildSystem/build/framework.py	/^    import getsplicers$/;"	i
getsubcomm	include/petsc-private/viewerimpl.h	/^   PetscErrorCode (*getsubcomm)(PetscViewer,MPI_Comm,PetscViewer*);$/;"	m	struct:_PetscViewerOps
getsubmatrices	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getsubmatrices)(Mat,PetscInt,const IS[],const IS[],MatReuse,Mat *[]);$/;"	m	struct:_MatOps
getsubmatricesparallel	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getsubmatricesparallel)(Mat,PetscInt,const IS[], const IS[], MatReuse, Mat**);$/;"	m	struct:_MatOps
getsubmatrix	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getsubmatrix)(Mat,IS,IS,MatReuse,Mat*);$/;"	m	struct:_MatOps
getsubvector	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*getsubvector)(Vec,IS,Vec*);$/;"	m	struct:_VecOps
gettime	bin/urlget.py	/^    def gettime():$/;"	m	class:url_object
gettime	bin/urlget.py	/^    def gettime(self):$/;"	m	class:ftp_object
gettime	bin/urlget.py	/^    def gettime(self):$/;"	m	class:http_object
gettime	bin/urlget.py	/^    def gettime(self):$/;"	m	class:local_object
getvalues	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getvalues)(Mat,PetscInt,const PetscInt[],PetscInt,const PetscInt[],PetscScalar []);$/;"	m	struct:_MatOps
getvalues	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*getvalues)(Vec,PetscInt,const PetscInt[],PetscScalar[]);$/;"	m	struct:_VecOps
getvecs	include/petsc-private/matimpl.h	/^  PetscErrorCode (*getvecs)(Mat,Vec*,Vec*);$/;"	m	struct:_MatOps
ghostedcoloring	include/petsc-private/dmdaimpl.h	/^  ISColoring            ghostedcoloring;$/;"	m	struct:__anon23
gid	include/petscmat.h	/^  PetscInt             gid;$/;"	m	struct:_PetscCDIntNd
glob	config/BuildSystem/config/packages/BlasLapack.py	/^        import glob$/;"	i
globalCellNumbers	include/petsc-private/dmpleximpl.h	/^  IS                   globalCellNumbers;$/;"	m	struct:__anon30
globalScatter	include/petsc-private/meshimpl.h	/^  VecScatter           globalScatter;$/;"	m	struct:__anon16
globalVertexNumbers	include/petsc-private/dmpleximpl.h	/^  IS                   globalVertexNumbers;$/;"	m	struct:__anon30
globalend	include/petsc-private/isimpl.h	/^  PetscInt globalend;          \/* last + 1 global referenced in indices *\/$/;"	m	struct:_p_ISLocalToGlobalMapping
globalin	include/petsc-private/dmimpl.h	/^  Vec                     globalin[DM_MAX_WORK_VECTORS],globalout[DM_MAX_WORK_VECTORS];$/;"	m	struct:_p_DM
globalizeLocalAdjacencyGraph	include/petscdmmesh.hh	/^PetscErrorCode globalizeLocalAdjacencyGraph(const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar> >& mesh, const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar>::sieve_type>& adjGraph, const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar>::send_overlap_type>& sendOverlap, const ALE::Obj<Order>& globalOrder)$/;"	f
globalizeLocalAdjacencyGraph	include/petscdmmesh.hh	/^PetscErrorCode globalizeLocalAdjacencyGraph(const ALE::Obj<Mesh>& mesh, const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar>::sieve_type>& adjGraph, const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar>::send_overlap_type>& sendOverlap, const ALE::Obj<Order>& globalOrder)$/;"	f
globalout	include/petsc-private/dmimpl.h	/^  Vec                     globalin[DM_MAX_WORK_VECTORS],globalout[DM_MAX_WORK_VECTORS];$/;"	m	struct:_p_DM
globals	include/petsc-private/isimpl.h	/^  PetscInt *globals;           \/* local index for each global index between start and end *\/$/;"	m	struct:_p_ISLocalToGlobalMapping
globalstart	include/petsc-private/isimpl.h	/^  PetscInt globalstart;        \/* first global referenced in indices *\/$/;"	m	struct:_p_ISLocalToGlobalMapping
globaltolocalbegin	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*globaltolocalbegin)(DM,Vec,InsertMode,Vec);$/;"	m	struct:_DMOps
globaltolocalend	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*globaltolocalend)(DM,Vec,InsertMode,Vec);$/;"	m	struct:_DMOps
graph	config/BuildSystem/config/framework.py	/^    import graph$/;"	i
graph	config/BuildSystem/maker.py	/^      import graph$/;"	i
graph	config/BuildSystem/maker.py	/^    import graph$/;"	i
graph	config/builder.py	/^     import graph$/;"	i
graph	config/builder.py	/^    import graph$/;"	i
graph	include/petsc-private/matimpl.h	/^  Mat         graph;$/;"	m	struct:_p_MatCoarsen
graphDiameter	include/sieve/Sieve.hh	/^      int  maxDepth, maxHeight, graphDiameter;$/;"	m	class:ALE::Sieve
graph_partitioner_type	include/sieve/Partitioner.hh	/^    typedef GraphPartitioner                     graph_partitioner_type;$/;"	t	class:ALE::Partitioner
graph_type	include/sieve/LabelSifter.hh	/^      typedef LabelSifter<Source_, Target_, Alloc_> graph_type;$/;"	t	struct:ALE::LabelSifter::__anon7
graph_type	include/sieve/Sifter.hh	/^      typedef ASifter<Source_, Target_, Color_, colorMultiplicity, SupportCompare_, SourceCtnr_, TargetCtnr_> graph_type;$/;"	t	struct:ALE::ASifter::__anon2
graphset	include/petsc-private/sfimpl.h	/^  PetscBool       graphset;     \/* Flag indicating that the graph has been set, required before calling communication routines *\/$/;"	m	struct:_p_PetscSF
grid	bin/TOPSGenerator.py	/^        grid = buttonbox(message="Type of grid?", title=title, choices = ["logically rectangular", "unstructured"],fontSize = 20)$/;"	v
gridsequence	include/petsc-private/snesimpl.h	/^  PetscInt    gridsequence;       \/* number of grid sequence steps to take; defaults to zero *\/$/;"	m	struct:_p_SNES
gsctx	include/petsc-private/snesimpl.h	/^  void *gsctx;$/;"	m	struct:_p_DMSNES
gtol	include/petsc-private/dmdaimpl.h	/^  VecScatter            gtol,ltog,ltol;        \/* scatters, see below for details *\/$/;"	m	struct:__anon23
gtolhook	include/petsc-private/dmimpl.h	/^  DMGlobalToLocalHookLink gtolhook;$/;"	m	struct:_p_DM
gton	include/petsc-private/dmdaimpl.h	/^  VecScatter            gton;               \/* vector scatter from global to natural *\/$/;"	m	struct:__anon23
guess	include/petsc-private/kspimpl.h	/^  KSPFischerGuess guess;$/;"	m	struct:_p_KSP
guess_knoll	include/petsc-private/kspimpl.h	/^                  guess_knoll;                \/* use initial guess of PCApply(ksp->B,b *\/$/;"	m	struct:_p_KSP
guess_zero	include/petsc-private/kspimpl.h	/^  PetscBool       guess_zero,                  \/* flag for whether initial guess is 0 *\/$/;"	m	struct:_p_KSP
gxm	include/petscdmdatypes.h	/^  PetscInt         gxm,gym,gzm;    \/* number of grid points on this processor including ghosts *\/$/;"	m	struct:__anon5
gxs	include/petscdmdatypes.h	/^  PetscInt         gxs,gys,gzs;    \/* starting point of this processor including ghosts *\/$/;"	m	struct:__anon5
gym	include/petscdmdatypes.h	/^  PetscInt         gxm,gym,gzm;    \/* number of grid points on this processor including ghosts *\/$/;"	m	struct:__anon5
gys	include/petscdmdatypes.h	/^  PetscInt         gxs,gys,gzs;    \/* starting point of this processor including ghosts *\/$/;"	m	struct:__anon5
gzip	bin/urlget.py	/^            import gzip$/;"	i
gzm	include/petscdmdatypes.h	/^  PetscInt         gxm,gym,gzm;    \/* number of grid points on this processor including ghosts *\/$/;"	m	struct:__anon5
gzs	include/petscdmdatypes.h	/^  PetscInt         gxs,gys,gzs;    \/* starting point of this processor including ghosts *\/$/;"	m	struct:__anon5
h	include/petsc-private/drawimpl.h	/^  int             x,y,h,w;$/;"	m	struct:_p_PetscDraw
handle	config/BuildSystem/RDict.py	/^      def handle(self):$/;"	m	class:RDict.serve.ProcessHandler
handleErrors	config/BuildSystem/build/compile/SIDL.py	/^  def handleErrors(self, command, status, output):$/;"	m	class:Compiler
handleErrors	config/BuildSystem/build/processor.py	/^  def handleErrors(self, command, status, output):$/;"	m	class:ImportSharedLinker
handleErrors	config/BuildSystem/build/processor.py	/^  def handleErrors(self, command, status, output):$/;"	m	class:Processor
handleFile	config/BuildSystem/build/bk.py	/^  def handleFile(self, f, set):$/;"	m	class:Tag
handleFile	config/BuildSystem/build/fileState.py	/^  def handleFile(self, f, set):$/;"	m	class:FileChanged
handleFile	config/BuildSystem/build/fileState.py	/^  def handleFile(self, f, set):$/;"	m	class:GenericTag
handleFile	config/BuildSystem/build/fileState.py	/^  def handleFile(self, f, set):$/;"	m	class:Update
handleFile	config/BuildSystem/build/processor.py	/^  def handleFile(self, f, set):$/;"	m	class:LibraryAdder
handleFile	config/BuildSystem/build/processor.py	/^  def handleFile(self, f, set):$/;"	m	class:Processor
handleFile	config/BuildSystem/build/transform.py	/^  def handleFile(self, f, set = None):$/;"	m	class:Transform
handleFile	config/BuildSystem/build/transform.py	/^  def handleFile(self, f, set):$/;"	m	class:Consolidator
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handleFile	config/BuildSystem/build/transform.py	/^  def handleFile(self, f, set):$/;"	m	class:Remover
handleFileSet	config/BuildSystem/build/bk.py	/^  def handleFileSet(self, set):$/;"	m	class:Close
handleFileSet	config/BuildSystem/build/bk.py	/^  def handleFileSet(self, set):$/;"	m	class:Open
handleFileSet	config/BuildSystem/build/fileState.py	/^  def handleFileSet(self, set):$/;"	m	class:GenericTag
handleFileSet	config/BuildSystem/build/fileState.py	/^  def handleFileSet(self, set):$/;"	m	class:Update
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handleFileSet	config/BuildSystem/build/transform.py	/^  def handleFileSet(self, set):$/;"	m	class:Transform
hasArrowSection	include/sieve/CartesianSieve.hh	/^    bool hasArrowSection(const std::string& name) const {$/;"	f	class:ALE::CartesianBundle
hasArrowSection	include/sieve/Mesh.hh	/^    bool hasArrowSection(const std::string& name) const {$/;"	f	class:ALE::Bundle
hasArrowSection	include/sieve/Mesh.hh	/^    bool hasArrowSection(const std::string& name) const {$/;"	f	class:ALE::IBundle
hasBoundaryCondition	include/sieve/FEMProblem.hh	/^      virtual const bool hasBoundaryCondition() {return (this->_boundaryConditions.find("default") != this->_boundaryConditions.end());};$/;"	f	class:ALE::Problem::GeneralDiscretization
hasBoundaryCondition	include/sieve/Mesh.hh	/^    bool hasBoundaryCondition() {return (this->_boundaryConditions.find("default") != this->_boundaryConditions.end());};$/;"	f	class:ALE::Discretization
hasChanged	config/BuildSystem/build/fileState.py	/^  def hasChanged(self, source):$/;"	m	class:FileChanged
hasHelpFlag	config/BuildSystem/script.py	/^  def hasHelpFlag(self):$/;"	m	class:Script
hasIntSection	include/sieve/CartesianSieve.hh	/^    bool hasIntSection(const std::string& name) const {$/;"	f	class:ALE::CartesianBundle
hasIntSection	include/sieve/Mesh.hh	/^    bool hasIntSection(const std::string& name) const {$/;"	f	class:ALE::Bundle
hasIntSection	include/sieve/Mesh.hh	/^    bool hasIntSection(const std::string& name) const {$/;"	f	class:ALE::IBundle
hasLabel	include/sieve/Mesh.hh	/^    bool hasLabel(const std::string& name) {$/;"	f	class:ALE::Bundle
hasLabel	include/sieve/Mesh.hh	/^    bool hasLabel(const std::string& name) {$/;"	f	class:ALE::IBundle
hasLabel	include/sieve/Topology.hh	/^    bool hasLabel(const std::string& name, const patch_type& patch) {$/;"	f	class:ALE::Topology
hasNewPoints	include/sieve/IField.hh	/^    bool hasNewPoints() {return this->newPoints.size() > 0;};$/;"	f	class:ALE::IGeneralSection
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hasParent	config/BuildSystem/RDict.py	/^      hasParent = rdict.hasParent()$/;"	v	class:RDict.serve.ProcessHandler
hasParent	config/BuildSystem/RDict.py	/^  def hasParent(self):$/;"	m	class:RDict
hasPatch	include/sieve/Field.hh	/^    bool hasPatch(const patch_type& patch) {$/;"	f	class:ALE::Field
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hasPoint	include/sieve/Field.hh	/^    bool hasPoint(const point_type& point) const {$/;"	f	class:ALE::ConstantSection
hasPoint	include/sieve/Field.hh	/^    bool hasPoint(const point_type& point) {$/;"	f	class:ALE::FEMSection
hasPoint	include/sieve/Field.hh	/^    bool hasPoint(const point_type& point) {$/;"	f	class:ALE::GeneralSection
hasPoint	include/sieve/Field.hh	/^    bool hasPoint(const point_type& point) {$/;"	f	class:ALE::NewUniformSection
hasPoint	include/sieve/Field.hh	/^    bool hasPoint(const point_type& point) {$/;"	f	class:ALE::Section
hasPoint	include/sieve/Field.hh	/^    bool hasPoint(const point_type& point) {$/;"	f	class:ALE::UniformSection
hasPoint	include/sieve/IField.hh	/^    bool hasPoint(const point_type& point) const {$/;"	f	class:ALE::IConstantSection
hasPoint	include/sieve/IField.hh	/^    bool hasPoint(const point_type& point) const {$/;"	f	class:ALE::IUniformSection
hasPoint	include/sieve/ISieve.hh	/^    bool hasPoint(const point_type& point) const {$/;"	f	class:ALE::Interval
hasPoint	include/sieve/Sections.hh	/^      bool hasPoint(const point_type& point) {$/;"	f	class:ALE::New::SizeSection
hasPoint	include/sieve/Sections.hh	/^      bool hasPoint(const point_type& point) {return this->_sieve->baseContains(point);};$/;"	f	class:ALE::New::ArrowSection
hasPoint	include/sieve/Sections.hh	/^      bool hasPoint(const point_type& point) {return true;};$/;"	f	class:ALE::New::ConeSection
hasPoint	include/sieve/Sections.hh	/^      bool hasPoint(const point_type& point) {return true;};$/;"	f	class:ALE::New::ConeSizeSection
hasPoint	include/sieve/Sections.hh	/^      bool hasPoint(const point_type& point) {return true;};$/;"	f	class:ALE::New::PartitionSection
hasPoint	include/sieve/Sections.hh	/^      bool hasPoint(const point_type& point) {return true;};$/;"	f	class:ALE::New::PartitionSizeSection
hasPoint	include/sieve/Sections.hh	/^      bool hasPoint(const point_type& point) {return true;};$/;"	f	class:ALE::New::SupportSection
hasPoint	include/sieve/Sections.hh	/^      bool hasPoint(const point_type& point) {return true;};$/;"	f	class:ALE::New::SupportSizeSection
hasPoint	include/sieve/Sections.hh	/^    bool hasPoint(const point_type& point) const {$/;"	f	class:ALE::BaseSection
hasPoint	include/sieve/Sections.hh	/^    bool hasPoint(const point_type& point) const {$/;"	f	class:ALE::BaseSectionV
hasPoint	include/sieve/Sections.hh	/^    bool hasPoint(const point_type& point) const {$/;"	f	class:ALE::LabelBaseSection
hasPoint	include/sieve/Sections.hh	/^    bool hasPoint(const point_type& point) const {$/;"	f	class:ALE::LabelBaseSectionV
hasPoint	include/sieve/Sections.hh	/^    bool hasPoint(const point_type& point) {$/;"	f	class:ALE::ConeSection
hasPoint	include/sieve/Sections.hh	/^    bool hasPoint(const point_type& point) {$/;"	f	class:ALE::ConeSectionV
hasPoint	include/sieve/Sections.hh	/^    bool hasPoint(const point_type& point) {$/;"	f	class:ALE::ConeSizeSection
hasPoint	include/sieve/Sections.hh	/^    bool hasPoint(const point_type& point) {$/;"	f	class:ALE::ConeSizeSectionV
hasPoint	include/sieve/Sections.hh	/^    bool hasPoint(const point_type& point) {$/;"	f	class:ALE::LabelSection
hasPoint	include/sieve/Sections.hh	/^    bool hasPoint(const point_type& point) {$/;"	f	class:ALE::OrientedConeSectionV
hasPoint	include/sieve/Sieve.hh	/^      bool hasPoint(const point_type& point) {$/;"	f	class:ALE::Sieve
hasRealSection	include/sieve/CartesianSieve.hh	/^    bool hasRealSection(const std::string& name) const {$/;"	f	class:ALE::CartesianBundle
hasRealSection	include/sieve/Mesh.hh	/^    bool hasRealSection(const std::string& name) const {$/;"	f	class:ALE::Bundle
hasRealSection	include/sieve/Mesh.hh	/^    bool hasRealSection(const std::string& name) const {$/;"	f	class:ALE::IBundle
hasType	config/BuildSystem/RDict.py	/^  def hasType(self, key):$/;"	m	class:RDict
has_cnst	include/petsc-private/matimpl.h	/^  PetscBool      has_cnst;$/;"	m	struct:_p_MatNullSpace
has_key	config/BuildSystem/RDict.py	/^  def has_key(self, key):$/;"	m	class:RDict
has_key	config/BuildSystem/sourceDatabase.py	/^  def has_key(self, key):$/;"	m	class:SourceDB
hashlib	config/builder.py	/^    import hashlib$/;"	i
haveFunction	config/BuildSystem/config/functions.py	/^  def haveFunction(self, function):$/;"	m	class:Configure
haveHeader	config/BuildSystem/config/headers.py	/^  def haveHeader(self, header):$/;"	m	class:Configure
haveLib	config/BuildSystem/config/libraries.py	/^  def haveLib(self, library):$/;"	m	class:Configure
head	include/petscctable.h	/^  PetscInt head;$/;"	m	struct:_n_PetscTable
height	include/sieve/CartesianSieve.hh	/^    virtual int height() const {return this->_maxHeight;};$/;"	f	class:ALE::CartesianBundle
height	include/sieve/CartesianSieve.hh	/^    virtual int height(const point_type& point) {$/;"	f	class:ALE::CartesianBundle
height	include/sieve/Mesh.hh	/^      label_type&       height;$/;"	m	class:ALE::IBundle::HeightVisitor
height	include/sieve/Mesh.hh	/^      label_type& height;$/;"	m	class:ALE::IBundle::BinaryStratifyVisitor
height	include/sieve/Mesh.hh	/^    virtual int height() const {return this->_maxHeight;};$/;"	f	class:ALE::Bundle
height	include/sieve/Mesh.hh	/^    virtual int height() const {return this->_maxHeight;};$/;"	f	class:ALE::IBundle
height	include/sieve/Mesh.hh	/^    virtual int height(const point_type& point) {$/;"	f	class:ALE::Bundle
height	include/sieve/Mesh.hh	/^    virtual int height(const point_type& point) {$/;"	f	class:ALE::IBundle
height	include/sieve/Sieve.hh	/^         virtual const int& height()  const {return this->_itor->height;};$/;"	f	class:ALE::SieveDef::RecContainerTraits::ValueSequence::iterator
height	include/sieve/Sieve.hh	/^         virtual const int& height() const {return this->_itor->height;};$/;"	f	class:ALE::SieveDef::RecContainerTraits::PointSequence::iterator
height	include/sieve/Sieve.hh	/^      int         height;$/;"	m	struct:ALE::SieveDef::Rec
height	include/sieve/Sieve.hh	/^    int Sieve<Point_,Marker_,Color_>::height() {$/;"	f	class:ALE::Sieve
height	include/sieve/Sieve.hh	/^    int Sieve<Point_,Marker_,Color_>::height(const Obj<InputSequence>& points) {$/;"	f	class:ALE::Sieve
height	include/sieve/Sieve.hh	/^    int Sieve<Point_,Marker_,Color_>::height(const point_type& p) {$/;"	f	class:ALE::Sieve
height	include/sieve/Topology.hh	/^    int height() const {return this->_maxHeight;};$/;"	f	class:ALE::Topology
height	include/sieve/Topology.hh	/^    int height(const patch_type& patch) {$/;"	f	class:ALE::Topology
height	include/sieve/Topology.hh	/^    int height(const patch_type& patch, const point_type& point) {$/;"	f	class:ALE::Topology
heightMarkerTag	include/sieve/Sieve.hh	/^      struct heightMarkerTag{};$/;"	s	struct:ALE::SieveDef::RecContainerTraits
heightSequence	include/sieve/Sieve.hh	/^        typedef typename cap_container_type::traits::template TwoValueSequence<typename cap_container_type::traits::heightMarkerTag,int> heightSequence;$/;"	t	struct:ALE::Sieve::__anon9
heightStratum	include/sieve/CartesianSieve.hh	/^    virtual const Obj<label_sequence> heightStratum(int height) {$/;"	f	class:ALE::CartesianBundle
heightStratum	include/sieve/Mesh.hh	/^    virtual const Obj<label_sequence>& heightStratum(int height) {$/;"	f	class:ALE::Bundle
heightStratum	include/sieve/Mesh.hh	/^    virtual const Obj<label_sequence>& heightStratum(int height) {$/;"	f	class:ALE::IBundle
heightStratum	include/sieve/Sieve.hh	/^      Obj<typename traits::heightSequence> heightStratum(int h) {$/;"	f	class:ALE::Sieve
heightStratum	include/sieve/Sieve.hh	/^      Obj<typename traits::heightSequence> heightStratum(int h, marker_type m) {$/;"	f	class:ALE::Sieve
heightStratum	include/sieve/Topology.hh	/^    const Obj<label_sequence>& heightStratum(const patch_type& patch, int height) {$/;"	f	class:ALE::Topology
help	config/BuildSystem/script.py	/^    import help$/;"	i
help	include/petsc-private/bagimpl.h	/^  char          name[PETSC_BAG_NAME_LENGTH],help[PETSC_BAG_HELP_LENGTH];$/;"	m	struct:_n_PetscBagItem
help	src/dm/dt/examples/tests/ex1.c	/^static char help[] = "Tests 1D discretization tools.\\n\\n";$/;"	v	file:
help	src/dm/dt/examples/tests/ex2.c	/^static char help[] = "Tests 1D cell-based discretization tools.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/TestMeshExodus.c	/^static char help[] = "Test a new generation ExodusII reader\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/args0.cxx	/^static char help[] = "Basic ArgDB functionality test.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/closure1.cxx	/^static char help[] = "Traverses the closure of an element.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/discretization1.cxx	/^static char help[] = "Discretization Tests.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^static char help[] = "Sieve Package Parallel Correctness Tests.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/ex00.c	/^static char help[] = "Tests basic ALE memory management and logging.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/ex01.c	/^static char help[] = "Constructs, completes, and views a simple 'hat' Sieve.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/ex02.c	/^static char help[] = "Constructs the doublet Sieve bottom-up and top-down, viewing the resulting stratum structure each time.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/ex03.c	/^static char help[] = "Constructs a series of BiGraphs and performs basic queries on them.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/ex04.cxx	/^static char help[] = "Constructs and views test ParDelta::ConeArraySequences and ParDelta::Flip involved in ParDelta.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/ex05.cxx	/^static char help[] = "Constructs a series of parallel BiGraphs and performs ParDelta routines.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/ex06.cxx	/^static char help[] = "Constructs and views a test BiGraph and then wraps it in a ParDelta::Flip and views the Flip.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/ex07.cxx	/^static char help[] = "Constructs and views test Predicate-enabled ArrowContainers.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/ex08.cxx	/^static char help[] = "Constructs and views test Predicate-enabled ArrowContainers.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/ex1.c	/^static char help[] = "Test of Mesh and Field Distribution.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/ex10.c	/^static char help[] = "test2.c: test of the new generation ExodusII readers: loads a mesh and creates sections and vectors\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/ex2.c	/^static char help[] = "Test of Sieve vs. New Mesh and Field Distribution.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/ex3.c	/^static char help[] = "Mesh Distribution with SF.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/ex4.c	/^static char help[] = "test1.c: test of the new generation ExodusII readers: loads and displays a mesh\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/ex6.c	/^static char help[] = "test2.c: test of the new generation ExodusII readers: loads a meshand creates sections\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/ex8.c	/^static char help[] = "test2.c: test of the new generation ExodusII readers: loads a mesh and creates matrices\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^static char help[] = "Sieve Package Memory Tests.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/mesh1.cxx	/^static char help[] = "Mesh Tests.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/mesh2.cxx	/^static char help[] = "Mesh Tests.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/meshing.cxx	/^static char help[] = "Meshing Tests. \\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/operator1.cxx	/^static char help[] = "Operator Tests.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/overlap1.cxx	/^static char help[] = "Overlap Tests.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/overlap2.cxx	/^static char help[] = "Global Ordering Tests.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/refinementTest.cxx	/^static char help[] = "Mesh Refinement Tests.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/section1-old.cxx	/^static char help[] = "Section Tests.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/section2.cxx	/^static char help[] = "Section Boundary Condition Tests.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/sieve2-old.cxx	/^static char help[] = "Sieve Distribution Tests.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/sieveTests.cxx	/^static char help[] = "Sieve Package Tests.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/topology1.cxx	/^static char help[] = "Topology Tests.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/unitTests.cxx	/^static char help[] = "Sieve Package Correctness and Performance Unit Tests.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/xsieve0.cxx	/^static char help[] = "XSieve Basic Ordering Tests.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/xsieve1.cxx	/^static char help[] = "XSieve Base Tests.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/xsieve2.cxx	/^static char help[] = "XSieve Cone and Support Tests.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/xsieve3.cxx	/^static char help[] = "XSieve Basic Slice test.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tests/xsieve4.cxx	/^static char help[] = "XSieve Boundary Test.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tutorials/ex1.c	/^static char help[] = "Reads, partitions, and outputs an unstructured mesh.\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tutorials/ex_interpolate_1.c	/^static char help[] = "tests getInterpolation\\n\\n";$/;"	v	file:
help	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^static char help[] = "This example reads in a FVM mesh for PFLOTRAN.\\n\\n";$/;"	v	file:
help	src/dm/impls/moab/examples/tests/ex1.cxx	/^static char help[] = "Simple MOAB example\\n\\n";$/;"	v	file:
help	src/dm/impls/plex/examples/tests/ex1.c	/^static char help[] = "Run C version of TetGen to construct and refine a mesh\\n\\n";$/;"	v	file:
help	src/dm/impls/plex/examples/tests/ex3.c	/^static char help[] = "Check that a particular FIAT-style header gives accurate function representations\\n\\n";$/;"	v	file:
help	src/dm/impls/plex/examples/tests/ex4.c	/^static char help[] = "Tests for uniform refinement of hybrid meshes\\n\\n";$/;"	v	file:
help	src/dm/impls/plex/examples/tests/ex5.c	/^static char help[] = "Tests for creation of hybrid meshes\\n\\n";$/;"	v	file:
help	src/dm/impls/plex/examples/tests/ex6.c	/^static char help[] = "Tests for DMLabel lookup\\n\\n";$/;"	v	file:
help	src/dm/impls/plex/examples/tests/ex7.c	/^static char help[] = "Tests for mesh interpolation\\n\\n";$/;"	v	file:
help	src/dm/impls/plex/examples/tests/ex8.c	/^static char help[] = "Tests for cell geometry\\n\\n";$/;"	v	file:
hermitian	include/petsc-private/matimpl.h	/^  PetscBool              symmetric,hermitian,structurally_symmetric,spd;$/;"	m	struct:_p_Mat
hermitian_set	include/petsc-private/matimpl.h	/^  PetscBool              symmetric_set,hermitian_set,structurally_symmetric_set,spd_set; \/* if true, then corresponding flag is correct*\/$/;"	m	struct:_p_Mat
hermitiantranspose	include/petsc-private/matimpl.h	/^  PetscErrorCode (*hermitiantranspose)(Mat,MatReuse,Mat*);$/;"	m	struct:_MatOps
holes_type	include/sieve/Mesh.hh	/^    typedef std::vector<PETSc::Point<3> >    holes_type;$/;"	t	class:ALE::Mesh
holes_type	include/sieve/Mesh.hh	/^    typedef std::vector<typename PETSc::Point<3> >    holes_type;$/;"	t	class:ALE::IMesh
httpRetrieve	config/BuildSystem/retrieval.py	/^  def httpRetrieve(self, url, root, name,force):$/;"	m	class:Retriever
http_object	bin/urlget.py	/^class http_object(url_object):$/;"	c
httplib	bin/adiforfix.py	/^import httplib$/;"	i
htype	include/petsc-private/matimpl.h	/^  const char     *htype;            \/* "wp" or "ds" *\/$/;"	m	struct:_p_MatFDColoring
hybridPointMax	include/petsc-private/dmpleximpl.h	/^  PetscInt             hybridPointMax[8]; \/* Allow segregation of some points, each dimension has a divider (used in VTK output and refinement) *\/$/;"	m	struct:__anon30
hz	include/petscsys.h	1957;"	d
i	bin/TOPSInstaller.py	/^             i = i.lower().replace(' ','')$/;"	v
i	bin/matlab/classes/matlabheader.h	/^    int k,j,i,c;$/;"	m	struct:__anon1
i	include/petsc-private/characteristicimpl.h	/^  int           i, j; \/* The vertex for which we need field values *\/$/;"	m	struct:_p_Item
i	include/petsc-private/matimpl.h	/^  PetscInt   *i;                            \/* compressed row pointer  *\/$/;"	m	struct:__anon3
i	include/petscmat.h	/^  PetscInt k,j,i,c;$/;"	m	struct:__anon89
i	include/sieve/ISieve.hh	/^      PetscInt           i;$/;"	m	class:ALE::ISieveVisitor::UpdateVecVisitor
i	include/sieve/ISieve.hh	/^      int                 i, p;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
i	include/sieve/ISieve.hh	/^      int                i;$/;"	m	class:ALE::ISieveVisitor::RestrictVecVisitor
i	include/sieve/ISieve.hh	/^      int               i;$/;"	m	class:ALE::ISieveVisitor::UpdateAddVisitor
i	include/sieve/ISieve.hh	/^      int               i;$/;"	m	class:ALE::ISieveVisitor::UpdateAllVisitor
i	include/sieve/ISieve.hh	/^      int               i;$/;"	m	class:ALE::ISieveVisitor::UpdateVisitor
i	include/sieve/ISieve.hh	/^      int            i, p;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
i	include/sieve/ISieve.hh	/^      int            i;$/;"	m	class:ALE::ISieveVisitor::RestrictVisitor
i	include/sieve/ISieve.hh	/^      size_t               i, o;$/;"	m	class:ALE::ISieveVisitor::PointRetriever
i	include/sieve/ISieve.hh	/^      size_t              i, o;$/;"	m	class:ALE::ISieveVisitor::ArrowRetriever
i	include/sieve/ISieve.hh	/^      size_t       i, o;$/;"	m	class:ALE::ISieveVisitor::FilteredPointRetriever
iccfactor	include/petsc-private/matimpl.h	/^  PetscErrorCode (*iccfactor)(Mat,IS,const MatFactorInfo*);$/;"	m	struct:_MatOps
iccfactorsymbolic	include/petsc-private/matimpl.h	/^  PetscErrorCode (*iccfactorsymbolic)(Mat,Mat,IS,const MatFactorInfo*);$/;"	m	struct:_MatOps
icreatedinstance	src/dm/impls/moab/dmmoab.cxx	/^  PetscBool icreatedinstance; \/* true if DM created moab instance internally, will destroy instance in DMDestroy *\/$/;"	m	struct:__anon1	file:
id	include/petsc-private/petscimpl.h	/^  PetscInt             id;$/;"	m	struct:_p_PetscObject
id	include/petsclog.h	/^  PetscClassId   id;           \/* The integer identifying this class *\/$/;"	m	struct:__anon63
id	include/petsclog.h	/^  int            id;            \/* The integer identifying this event *\/$/;"	m	struct:__anon65
id	include/petsclog.hh	/^    PetscLogEvent id;$/;"	m	class:PETSc::LogEvent
id	include/petsclog.hh	/^    PetscLogEvent id;$/;"	m	class:PETSc::LogStage
id1	include/petsc-private/logimpl.h	/^  int            id1, id2, id3; \/* The ids of associated objects *\/$/;"	m	struct:_Action
id2	include/petsc-private/logimpl.h	/^  int            id1, id2, id3; \/* The ids of associated objects *\/$/;"	m	struct:_Action
id3	include/petsc-private/logimpl.h	/^  int            id1, id2, id3; \/* The ids of associated objects *\/$/;"	m	struct:_Action
identity	include/petsc-private/isimpl.h	/^  PetscErrorCode (*identity)(IS,PetscBool*);$/;"	m	struct:_ISOps
idistribution	src/dm/impls/mesh/examples/tests/unitTests.cxx	/^  PetscBool  idistribution; \/\/ Run the IDistribution tests$/;"	m	struct:__anon23	file:
idx	include/petsc-private/dmdaimpl.h	/^  PetscInt              *idx,Nl;               \/* local to global map *\/$/;"	m	struct:__anon23
idx	include/petsc-private/matimpl.h	/^  PetscInt           *idx,*idy;$/;"	m	struct:_MatStashSpace
idx	include/petsc-private/vecimpl.h	/^  PetscInt      *idx;                   \/* global row numbers in stash *\/$/;"	m	struct:__anon24
idx	include/sieve/Generator.hh	/^        int idx, v;$/;"	m	class:ALE::Triangle::Generator::SegmentVisitor
idy	include/petsc-private/matimpl.h	/^  PetscInt           *idx,*idy;$/;"	m	struct:_MatStashSpace
iface	src/dm/impls/moab/examples/tests/ex1.cxx	/^  moab::Interface *iface;$/;"	m	class:AppCtx	file:
ifilter	config/BuildSystem/config/setsBackport.py	/^    def ifilter(predicate, iterable):$/;"	f
ifilter	config/BuildSystem/config/setsBackport.py	/^    from itertools import ifilter, ifilterfalse$/;"	i
ifilter	config/BuildSystem/config/setsOrdered.py	/^    def ifilter(predicate, iterable):$/;"	f
ifilter	config/BuildSystem/config/setsOrdered.py	/^    from itertools import ifilter, ifilterfalse$/;"	i
ifilterfalse	config/BuildSystem/config/setsBackport.py	/^    def ifilterfalse(predicate, iterable):$/;"	f
ifilterfalse	config/BuildSystem/config/setsBackport.py	/^    from itertools import ifilter, ifilterfalse$/;"	i
ifilterfalse	config/BuildSystem/config/setsOrdered.py	/^    def ifilterfalse(predicate, iterable):$/;"	f
ifilterfalse	config/BuildSystem/config/setsOrdered.py	/^    from itertools import ifilter, ifilterfalse$/;"	i
iformat	include/petsc-private/viewerimpl.h	/^  int               iformat;   \/* number of formats that have been pushed on formats[] stack *\/$/;"	m	struct:_p_PetscViewer
ifunction	include/petsc-private/tsimpl.h	/^  TSIFunction ifunction;$/;"	m	struct:_DMTSOps
ifunctionctx	include/petsc-private/tsimpl.h	/^  void *ifunctionctx;$/;"	m	struct:_p_DMTS
ifunctionload	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*ifunctionload)(void**,PetscViewer);$/;"	m	struct:_DMTSOps
ifunctionview	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*ifunctionview)(void*,PetscViewer);$/;"	m	struct:_DMTSOps
ig	bin/TOPSGenerator.py	/^        ig = buttonbox(message="Will you provide an initial guess?", title=title, choices = ["No","Yes"],fontSize = 20)$/;"	v
ignorenegidx	include/petsc-private/vecimpl.h	/^  PetscBool     ignorenegidx;           \/* ignore negative indices passed into VecSetValues\/VetGetValues *\/$/;"	m	struct:__anon24
ijacobian	include/petsc-private/tsimpl.h	/^  TSIJacobian ijacobian;$/;"	m	struct:_DMTSOps
ijacobian	include/petsc-private/tsimpl.h	/^  } ijacobian;$/;"	m	struct:_p_TS	typeref:struct:_p_TS::__anon7
ijacobianctx	include/petsc-private/tsimpl.h	/^  void *ijacobianctx;$/;"	m	struct:_p_DMTS
ijacobianload	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*ijacobianload)(void**,PetscViewer);$/;"	m	struct:_DMTSOps
ijacobianview	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*ijacobianview)(void*,PetscViewer);$/;"	m	struct:_DMTSOps
ilufactor	include/petsc-private/matimpl.h	/^  PetscErrorCode (*ilufactor)(Mat,IS,IS,const MatFactorInfo*);$/;"	m	struct:_MatOps
ilufactorsymbolic	include/petsc-private/matimpl.h	/^  PetscErrorCode (*ilufactorsymbolic)(Mat,Mat,IS,IS,const MatFactorInfo*);$/;"	m	struct:_MatOps
imag	include/petscmath.h	/^  typedef struct {double real,imag;} petsc_mpiu_c_double_complex;$/;"	m	struct:__anon58
imag	include/petscmath.h	/^  typedef struct {float real,imag;} petsc_mpiu_c_complex;$/;"	m	struct:__anon59
imaginarypart	include/petsc-private/matimpl.h	/^  PetscErrorCode (*imaginarypart)(Mat);$/;"	m	struct:_MatOps
imesh	src/dm/impls/mesh/examples/tests/unitTests.cxx	/^  PetscBool  imesh;         \/\/ Run the IMesh tests$/;"	m	struct:__anon23	file:
imex	include/petsc-private/tsimpl.h	/^    PetscBool imex;             \/* Flag of the method if it was started as an imex method *\/$/;"	m	struct:_p_TS::__anon7
imp	config/BuildSystem/build/compile/SIDL.py	/^    import imp$/;"	i
imp	config/BuildSystem/build/framework.py	/^    import imp$/;"	i
imp	config/BuildSystem/script.py	/^    import imp$/;"	i
importModule	config/BuildSystem/script.py	/^  def importModule(moduleName):$/;"	m	class:Script
importModule	config/BuildSystem/script.py	/^  importModule = staticmethod(importModule)$/;"	v	class:Script
importer	config/BuildSystem/build/framework.py	/^import importer$/;"	i
importer	config/BuildSystem/checkdlllibs.py	/^import importer$/;"	i
include	config/BuildSystem/config/packages/PETSc.py	/^  include = property(getInclude, doc = 'The PETSc include directories')$/;"	v	class:Configure
include	config/PETSc/petsc.py	/^  include = property(getInclude, doc = 'The PETSc include directories')$/;"	v	class:Configure
includeDirsIter	config/BuildSystem/build/processor.py	/^  def includeDirsIter(self):$/;"	m	class:Compiler
includeGuesses	config/BuildSystem/config/packages/PETSc.py	/^  def includeGuesses(self, path = None):$/;"	m	class:Configure
includeGuesses	config/PETSc/petsc.py	/^  def includeGuesses(self, path = None):$/;"	m	class:Configure
includeRE	config/BuildSystem/sourceDatabase.py	/^  includeRE = re.compile(r'^#include (<|")(?P<includeFile>.+)\\1')$/;"	v	class:SourceDB
included_ALE_ALE_hh	include/sieve/ALE.hh	2;"	d
included_ALE_ALE_log_hh	include/sieve/ALE_log.hh	2;"	d
included_ALE_BasicCommunication_hh	include/sieve/BasicCommunication.hh	2;"	d
included_ALE_CartesianSieve_hh	include/sieve/CartesianSieve.hh	2;"	d
included_ALE_CoSieve_hh	include/sieve/Topology.hh	2;"	d
included_ALE_Completion_hh	include/sieve/Completion.hh	2;"	d
included_ALE_DMBuilder_hh	include/sieve/DMBuilder.hh	2;"	d
included_ALE_Distribution_hh	include/sieve/Distribution.hh	2;"	d
included_ALE_Field_hh	include/sieve/Field.hh	2;"	d
included_ALE_Generator_hh	include/sieve/Generator.hh	2;"	d
included_ALE_IField_hh	include/sieve/IField.hh	2;"	d
included_ALE_INumbering_hh	include/sieve/INumbering.hh	2;"	d
included_ALE_ISieve_hh	include/sieve/ISieve.hh	2;"	d
included_ALE_LabelSifter_hh	include/sieve/LabelSifter.hh	2;"	d
included_ALE_Mesh_hh	include/sieve/Mesh.hh	2;"	d
included_ALE_Numbering_hh	include/sieve/Numbering.hh	2;"	d
included_ALE_Ordering_hh	include/sieve/Ordering.hh	2;"	d
included_ALE_ParallelMapping_hh	include/sieve/ParallelMapping.hh	2;"	d
included_ALE_Partitioner_hh	include/sieve/Partitioner.hh	2;"	d
included_ALE_SectionCompletion_hh	include/sieve/SectionCompletion.hh	2;"	d
included_ALE_Sections_hh	include/sieve/Sections.hh	2;"	d
included_ALE_Selection_hh	include/sieve/Selection.hh	2;"	d
included_ALE_SieveAlgorithms_hh	include/sieve/SieveAlgorithms.hh	2;"	d
included_ALE_SieveBuilder_hh	include/sieve/SieveBuilder.hh	2;"	d
included_ALE_Sieve_hh	include/sieve/Sieve.hh	3;"	d
included_ALE_Sifter_hh	include/sieve/Sifter.hh	2;"	d
included_ALE_args_hh	include/sieve/ALE_args.hh	2;"	d
included_ALE_containers_hh	include/sieve/ALE_containers.hh	2;"	d
included_ALE_exception_hh	include/sieve/ALE_exception.hh	2;"	d
included_ALE_mem_hh	include/sieve/ALE_mem.hh	2;"	d
included_ALE_overlapTest_hh	src/dm/impls/mesh/examples/tests/overlapTest.hh	2;"	d
included_ALE_sectionTest_hh	src/dm/impls/mesh/examples/tests/sectionTest.hh	2;"	d
included_ALE_unitTests_hh	src/dm/impls/mesh/examples/tests/unitTests.hh	2;"	d
included_ALE_xsieveTest_hh	src/dm/impls/mesh/examples/tests/xsieveTest.hh	2;"	d
included_PETSc_Overlap_hh	include/sieve/Overlap.hh	2;"	d
included_location	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^Obj<topology_type::patch_label_type> included_location;   \/\/The triangle where a currently ADDED but unmeshed point.$/;"	m	class:ALE::Hierarchy::HierarchyBuilder
includes	config/BuildSystem/maker.py	/^  includes = property(getIncludes, setIncludes, doc = 'The list of SIDL include files')$/;"	v	class:SIDLMake
increaseoverlap	include/petsc-private/matimpl.h	/^  PetscErrorCode (*increaseoverlap)(Mat,PetscInt,IS[],PetscInt);$/;"	m	struct:_MatOps
index	include/petscsf.h	/^  PetscInt index;               \/* Index of node on rank *\/$/;"	m	struct:__anon6
index	include/sieve/ALE_containers.hh	/^    index_type  index;$/;"	m	class:ALE::Point
indexAlloc	include/sieve/ISieve.hh	/^    index_allocator_type indexAlloc;$/;"	m	class:ALE::IFSieve
indexAllocated	include/sieve/ISieve.hh	/^    bool                 indexAllocated;$/;"	m	class:ALE::IFSieve
indexSet	include/sieve/Mesh.hh	/^  class indexSet : public std::valarray<int> {$/;"	c	namespace:ALE
index_allocator_type	include/sieve/ISieve.hh	/^    typedef typename point_allocator_type::template rebind<index_type>::other index_allocator_type;$/;"	t	class:ALE::IFSieve
index_type	include/sieve/ALE_containers.hh	/^    typedef Index_                                   index_type;$/;"	t	struct:ALE::IndexSequence
index_type	include/sieve/ALE_containers.hh	/^    typedef int32_t index_type;$/;"	t	class:ALE::Point
index_type	include/sieve/Field.hh	/^    typedef Point                                                   index_type;$/;"	t	class:ALE::FEMSection
index_type	include/sieve/Field.hh	/^    typedef Point                                                   index_type;$/;"	t	class:ALE::GeneralSection
index_type	include/sieve/Field.hh	/^    typedef Point                                                   index_type;$/;"	t	class:ALE::Section
index_type	include/sieve/IField.hh	/^    typedef point_type                                              index_type;$/;"	t	class:ALE::IUniformSection
index_type	include/sieve/IField.hh	/^    typedef point_type                       index_type;$/;"	t	class:ALE::IConstantSection
index_type	include/sieve/IField.hh	/^    typedef typename base::index_type       index_type;$/;"	t	class:ALE::IGeneralSection
index_type	include/sieve/IField.hh	/^    typedef typename base::index_type       index_type;$/;"	t	class:ALE::ISection
index_type	include/sieve/ISieve.hh	/^    typedef int                                index_type;$/;"	t	class:ALE::IFSieve
index_type	include/sieve/LabelSifter.hh	/^      typedef Index_ index_type;$/;"	t	struct:ALE::NewSifterDef::IndexSequenceTraits
index_type	include/sieve/LabelSifter.hh	/^      typedef typename base_traits::index_type      index_type;$/;"	t	struct:ALE::NewSifterDef::ReversibleIndexSequenceTraits
index_type	include/sieve/Mesh.hh	/^    typedef ALE::Point                                                index_type;$/;"	t	class:ALE::Bundle
index_type	include/sieve/Mesh.hh	/^    typedef ALE::Point                                                index_type;$/;"	t	class:ALE::IBundle
index_type	include/sieve/Overlap.hh	/^  typedef PetscInt index_type;$/;"	t	class:PETSc::Overlap
index_type	include/sieve/Overlap.hh	/^  typedef PetscInt index_type;$/;"	t	class:PETSc::RecvOverlap
index_type	include/sieve/Overlap.hh	/^  typedef PetscInt index_type;$/;"	t	class:PETSc::SendOverlap
index_type	include/sieve/Sifter.hh	/^      typedef Index_ index_type;$/;"	t	struct:ALE::SifterDef::IndexSequenceTraits
index_type	include/sieve/Sifter.hh	/^      typedef typename base_traits::index_type      index_type;$/;"	t	struct:ALE::SifterDef::ReversibleIndexSequenceTraits
indexbox	bin/TOPSInstaller.py	/^def indexbox(message="Shall I continue?", title="", choices=["Yes","No"]):$/;"	f
indices	include/petsc-private/isimpl.h	/^  PetscInt *indices;           \/* global index of each local index *\/$/;"	m	struct:_p_ISLocalToGlobalMapping
indices	include/petsc-private/vecimpl.h	/^  PetscInt               *indices; \/* list of all components sent or received *\/$/;"	m	struct:__anon29
indices	include/sieve/ISieve.hh	/^      int               *indices;$/;"	m	class:ALE::ISieveVisitor::RestrictVecVisitor
indices	include/sieve/Selection.hh	/^      int                   *indices;$/;"	m	class:ALE::Selection::FaceInserterV
indices	include/sieve/Selection.hh	/^      int                  *indices;$/;"	m	class:ALE::Selection::FaceInserter
indices	include/sieve/Selection.hh	/^      int            *indices;$/;"	m	class:ALE::Selection::FaceVisitor
indices_type	include/sieve/Mesh.hh	/^    typedef std::pair<int *, int>                                     indices_type;$/;"	t	class:ALE::Bundle
indices_type	include/sieve/Mesh.hh	/^    typedef std::pair<int *, int>                                     indices_type;$/;"	t	class:ALE::IBundle
info	config/BuildSystem/patch.py	/^info = logger.info$/;"	v
info	include/petsc-private/logimpl.h	/^  char           info[64]; \/* The information string *\/$/;"	m	struct:_Object
info	include/petsc-private/matimpl.h	/^  MatInfo                info;             \/* matrix information *\/$/;"	m	struct:_p_Mat
ingroup	include/petsc-private/sfimpl.h	/^  MPI_Group       ingroup;      \/* Group of processes connected to my roots *\/$/;"	m	struct:_p_PetscSF
init	include/sieve/CartesianSieve.hh	/^        void init() {$/;"	f	class:ALE::CartesianSieveDef::ConeSequence::iterator
init	include/sieve/CartesianSieve.hh	/^        void init() {$/;"	f	class:ALE::CartesianSieveDef::SupportSequence::iterator
initInput	include/sieve/Generator.hh	/^      static void initInput(struct triangulateio *inputCtx) {$/;"	f	class:ALE::Triangle::Generator
initOutput	include/sieve/Generator.hh	/^      static void initOutput(struct triangulateio *outputCtx) {$/;"	f	class:ALE::Triangle::Generator
initcygwinpath	config/BuildSystem/client-python/cygwinpath.c	/^void initcygwinpath(void) {$/;"	f
initialguessP	include/petsc-private/snesimpl.h	/^  void *initialguessP;           \/* user-defined initial guess context *\/$/;"	m	struct:_p_SNES
initialguessctx	include/petsc-private/kspimpl.h	/^  void *initialguessctx;$/;"	m	struct:_p_DMKSP
initialrtol	include/petsc-private/kspimpl.h	/^  PetscBool  initialrtol;    \/* default relative residual decrease is computing from initial residual, not rhs *\/$/;"	m	struct:__anon21
inputFileType	src/dm/impls/mesh/examples/tutorials/ex1.c	/^  FileType   inputFileType;          \/\/ The input file type, e.g. PCICE$/;"	m	struct:__anon6	file:
insert	config/BuildSystem/build/fileset.py	/^  def insert(self, index, item):$/;"	m	class:FileSet
insert	include/sieve/ALE_containers.hh	/^    inline insert(InputIterator b, InputIterator e) { return super::insert(b,e);}$/;"	f	class:ALE::set
insert	include/sieve/ALE_containers.hh	/^    inline insert(const Element_& e) { return super::insert(e); };$/;"	f	class:ALE::set::std
insert	include/sieve/ALE_containers.hh	/^    inline insert(iterator position, const Element_& e) {return super::insert(position,e);};$/;"	f	class:ALE::set
insert	include/sieve/ISieve.hh	/^      inline static void insert(value_type& x, value_type y) {x  = y;}$/;"	f	class:ALE::ISieveVisitor::UpdateVecVisitor
insertArg	config/BuildSystem/RDict.py	/^  def insertArg(self, key, value, arg):$/;"	m	class:RDict
insertArgs	config/BuildSystem/RDict.py	/^  def insertArgs(self, args):$/;"	m	class:RDict
insertArguments	config/BuildSystem/args.py	/^  def insertArguments(self, useEnvironment = 0):$/;"	m	class:ArgumentProcessor
insertCompilerFlag	config/BuildSystem/config/setCompilers.py	/^  def insertCompilerFlag(self, flag, compilerOnly):$/;"	m	class:Configure
insertFace	include/sieve/Selection.hh	/^    static void insertFace(const Obj<mesh_type>& mesh, const Obj<Sieve>& subSieve, const Obj<PointSet>& face, point_type& f,$/;"	f	class:ALE::Selection
insertNSupport	include/sieve/ISieve.hh	/^    void insertNSupport(point_type p, pointSet& set, const int depth) {$/;"	f	class:ALE::IFSieve
insertOffset	include/sieve/Overlap.hh	/^  index_type *insertOffset;      \/\/ [numRanks]: Offset into points array for fast assembly$/;"	m	class:PETSc::Overlap
insertmode	include/petsc-private/matimpl.h	/^  InsertMode             insertmode;       \/* have values been inserted in matrix or added? *\/$/;"	m	struct:_p_Mat
insertmode	include/petsc-private/vecimpl.h	/^  InsertMode    insertmode;$/;"	m	struct:__anon24
inspect	config/BuildSystem/RDict.py	/^    import inspect$/;"	i
install	config/BuildSystem/build/framework.py	/^    import install.installerclass$/;"	i
install	config/BuildSystem/build/framework.py	/^    import install.retrieval$/;"	i
install	config/BuildSystem/build/templates/Compile.py	/^  def install(self):$/;"	m	class:Template
install	config/BuildSystem/make.py	/^    import install.installerclass$/;"	i
install	config/BuildSystem/maker.py	/^    import install.urlMapping$/;"	i
install	config/BuildSystem/maker.py	/^  def install(self, builder, argDB):$/;"	m	class:BasicMake
install	config/BuildSystem/maker.py	/^  def install(self, builder, argDB):$/;"	m	class:Make
install	config/BuildSystem/maker.py	/^  def install(self, builder, argDB):$/;"	m	class:SIDLMake
install	config/BuildSystem/regression/buildtest.py	/^  def install(self, package, args = []):$/;"	m	class:RemoteBuild
installBin	config/install.py	/^  def installBin(self):$/;"	m	class:Installer
installClasses	config/BuildSystem/build/templates/usingCxx.py	/^  def installClasses(self, package):$/;"	m	class:UsingCxx
installClasses	config/BuildSystem/build/templates/usingPython.py	/^  def installClasses(self, package):$/;"	m	class:UsingPython
installClient	config/BuildSystem/build/templates/usingCxx.py	/^  def installClient(self):$/;"	m	class:UsingCxx
installClient	config/BuildSystem/build/templates/usingPython.py	/^  def installClient(self):$/;"	m	class:UsingPython
installConf	config/install.py	/^  def installConf(self):$/;"	m	class:Installer
installIncludes	config/BuildSystem/maker.py	/^  def installIncludes(self, builder):$/;"	m	class:BasicMake
installIncludes	config/install.py	/^  def installIncludes(self):$/;"	m	class:Installer
installLib	config/install.py	/^  def installLib(self):$/;"	m	class:Installer
installNeeded	config/BuildSystem/config/package.py	/^  def installNeeded(self, mkfile):$/;"	m	class:Package
installServer	config/BuildSystem/build/templates/usingCxx.py	/^  def installServer(self, package):$/;"	m	class:UsingCxx
installServer	config/BuildSystem/build/templates/usingPython.py	/^  def installServer(self, package):$/;"	m	class:UsingPython
installShare	config/install.py	/^  def installShare(self):$/;"	m	class:Installer
installedUrlMap	config/BuildSystem/urlMappingInstalled.py	/^def installedUrlMap(self, url):$/;"	f
installerclass	config/BuildSystem/build/framework.py	/^    import install.installerclass$/;"	i
installerclass	config/BuildSystem/make.py	/^    import install.installerclass$/;"	i
intAlloc	include/sieve/ISieve.hh	/^    int_allocator_type   intAlloc;$/;"	m	class:ALE::IFSieve
int_alloc_type	include/sieve/Completion.hh	/^      typedef typename alloc_type::template rebind<int>::other                            int_alloc_type;$/;"	t	class:ALE::New::Completion
int_alloc_type	include/sieve/Sections.hh	/^    typedef typename alloc_type::template rebind<int>::other int_alloc_type;$/;"	t	class:ALE::OrientedConeSectionV
int_alloc_type	include/sieve/Topology.hh	/^    typedef typename alloc_type::template rebind<int>::other      int_alloc_type;$/;"	t	class:ALE::Topology
int_allocator	include/sieve/ALE_mem.hh	/^    Allocator_int& int_allocator() {$/;"	f	class:ALE::Obj
int_allocator_type	include/sieve/ISieve.hh	/^    typedef typename point_allocator_type::template rebind<int>::other        int_allocator_type;$/;"	t	class:ALE::IFSieve
int_completion	include/sieve/SectionCompletion.hh	/^      typedef typename ALE::New::SectionCompletion<mesh_topology_type, int, alloc_type>        int_completion;$/;"	t	class:ALE::New::SectionCompletion
int_idmax	include/petsc-private/petscimpl.h	/^  PetscInt             int_idmax,        intstar_idmax;$/;"	m	struct:_p_PetscObject
int_section_type	include/petscdmmesh_formats.hh	/^      typedef Mesh::int_section_type  int_section_type;$/;"	t	class:ALE::PyLith::Builder
int_section_type	include/sieve/CartesianSieve.hh	/^    typedef Section<point_type, int>                                  int_section_type;$/;"	t	class:ALE::CartesianBundle
int_section_type	include/sieve/Mesh.hh	/^    typedef IntSection_                                               int_section_type;$/;"	t	class:ALE::Bundle
int_section_type	include/sieve/Mesh.hh	/^    typedef IntSection_                                               int_section_type;$/;"	t	class:ALE::IBundle
int_section_type	include/sieve/Mesh.hh	/^    typedef typename base_type::int_section_type      int_section_type;$/;"	t	class:ALE::IMesh
int_section_type	include/sieve/Selection.hh	/^    typedef typename mesh_type::int_section_type int_section_type;$/;"	t	class:ALE::Selection
int_section_type	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^typedef ALE::Mesh::int_section_type                     int_section_type;$/;"	t	namespace:ALE::Hierarchy
int_sections_type	include/sieve/CartesianSieve.hh	/^    typedef std::map<std::string, Obj<int_section_type> >             int_sections_type;$/;"	t	class:ALE::CartesianBundle
int_sections_type	include/sieve/Mesh.hh	/^    typedef std::map<std::string, Obj<int_section_type> >             int_sections_type;$/;"	t	class:ALE::Bundle
int_sections_type	include/sieve/Mesh.hh	/^    typedef std::map<std::string, Obj<int_section_type> >             int_sections_type;$/;"	t	class:ALE::IBundle
int_set	src/dm/impls/mesh/examples/tests/ex03.c	/^typedef std::set<int> int_set;$/;"	t	class:std	file:
intcomposeddata	include/petsc-private/petscimpl.h	/^  PetscInt             *intcomposeddata, **intstarcomposeddata;$/;"	m	struct:_p_PetscObject
intcomposedstate	include/petsc-private/petscimpl.h	/^  PetscInt             *intcomposedstate,*intstarcomposedstate;$/;"	m	struct:_p_PetscObject
integer4	include/finclude/petscsysdef.h	26;"	d
integer8	include/finclude/petscsysdef.h	25;"	d
integerbox	bin/TOPSInstaller.py	/^def integerbox(message="Enter something.", title=""$/;"	f
integral_type	include/sieve/FEMProblem.hh	/^      typedef std::map<std::string, Obj<GeneralIntegral> > integral_type;$/;"	t	class:ALE::Problem::GenericFormSubProblem
integrateBdResidualFEM	include/petsc-private/dmpleximpl.h	/^  PetscErrorCode (*integrateBdResidualFEM)(PetscInt, PetscInt, PetscInt, PetscQuadrature[], const PetscScalar[],$/;"	m	struct:__anon30
integrateDual	include/sieve/FEMProblem.hh	/^      virtual double integrateDual(unsigned int dof) {$/;"	f	class:ALE::Problem::GeneralBoundaryCondition
integrateDual	include/sieve/Mesh.hh	/^    PetscReal integrateDual(const PetscReal v0[], const PetscReal J[], const int dualIndex) const {return this->_integrator(v0, J, dualIndex, this->_func);};$/;"	f	class:ALE::BoundaryCondition
integrateDual	include/sieve/UFCProblem.hh	/^      virtual double integrateDual(unsigned int dof) {$/;"	f	class:ALE::Problem::UFCBoundaryCondition
integrateJacobianActionFEM	include/petsc-private/dmpleximpl.h	/^  PetscErrorCode (*integrateJacobianActionFEM)(PetscInt, PetscInt, PetscInt, PetscQuadrature[], const PetscScalar[], const PetscScalar[],$/;"	m	struct:__anon30
integrateJacobianFEM	include/petsc-private/dmpleximpl.h	/^  PetscErrorCode (*integrateJacobianFEM)(PetscInt, PetscInt, PetscInt, PetscInt, PetscQuadrature[], const PetscScalar[],$/;"	m	struct:__anon30
integrateResidualFEM	include/petsc-private/dmpleximpl.h	/^  PetscErrorCode (*integrateResidualFEM)(PetscInt, PetscInt, PetscInt, PetscQuadrature[], const PetscScalar[],$/;"	m	struct:__anon30
integrator_type	include/sieve/Mesh.hh	/^    typedef double (*integrator_type)(const PetscReal [], const PetscReal [], const int, function_type);$/;"	t	class:ALE::BoundaryCondition
interphook	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*interphook)(DM,Mat,DM,void*); \/* Run each time a new problem is interpolated to a fine grid *\/$/;"	m	struct:_DMRefineHookLink
interpolate	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*interpolate)(TS,PetscReal,Vec);$/;"	m	struct:_TSOps
interpolate	src/dm/impls/mesh/examples/tests/closure1.cxx	/^  PetscBool  interpolate; \/\/ Generate intermediate mesh elements$/;"	m	struct:__anon7	file:
interpolate	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^  PetscBool  interpolate; \/\/ Interpolate the mesh$/;"	m	struct:__anon14	file:
interpolate	src/dm/impls/mesh/examples/tests/ex1.c	/^  PetscBool     interpolate;       \/* Generate intermediate mesh elements *\/$/;"	m	struct:__anon16	file:
interpolate	src/dm/impls/mesh/examples/tests/ex2.c	/^  PetscBool     interpolate;       \/* Generate intermediate mesh elements *\/$/;"	m	struct:__anon17	file:
interpolate	src/dm/impls/mesh/examples/tests/ex3.c	/^  PetscBool     interpolate;       \/* Generate intermediate mesh elements *\/$/;"	m	struct:__anon15	file:
interpolate	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^  PetscBool  interpolate; \/\/ Interpolate the mesh$/;"	m	struct:__anon5	file:
interpolate	src/dm/impls/mesh/examples/tests/mesh1.cxx	/^  PetscBool  interpolate;     \/\/ Construct missing elements of the mesh$/;"	m	struct:__anon4	file:
interpolate	src/dm/impls/mesh/examples/tests/mesh2.cxx	/^  PetscBool  interpolate;     \/\/ Construct missing elements of the mesh$/;"	m	struct:__anon1	file:
interpolate	src/dm/impls/mesh/examples/tests/meshing.cxx	/^  PetscBool  interpolate;$/;"	m	struct:__anon6	file:
interpolate	src/dm/impls/mesh/examples/tests/operator1.cxx	/^  PetscBool  interpolate;     \/\/ Construct missing elements of the mesh$/;"	m	struct:__anon19	file:
interpolate	src/dm/impls/mesh/examples/tests/overlap2.cxx	/^  PetscBool  interpolate; \/\/ Construct missing elements of the mesh$/;"	m	struct:__anon13	file:
interpolate	src/dm/impls/mesh/examples/tests/section1-old.cxx	/^  PetscBool  interpolate;        \/\/ Construct missing elements of the mesh$/;"	m	struct:__anon22	file:
interpolate	src/dm/impls/mesh/examples/tests/sieve2-old.cxx	/^  PetscBool  interpolate;        \/\/ Construct missing elements of the mesh$/;"	m	struct:__anon18	file:
interpolate	src/dm/impls/mesh/examples/tests/sieveTests.cxx	/^  PetscBool  interpolate;   \/\/ Interpolate the mesh$/;"	m	struct:__anon11	file:
interpolate	src/dm/impls/mesh/examples/tests/topology1.cxx	/^  PetscBool  interpolate;        \/\/ Construct missing elements of the mesh$/;"	m	struct:__anon21	file:
interpolate	src/dm/impls/mesh/examples/tutorials/ex1.c	/^  PetscBool  interpolate;            \/\/ Construct missing elements of the mesh$/;"	m	struct:__anon6	file:
interpolate	src/dm/impls/mesh/examples/tutorials/ex_coarsen.c	/^  PetscBool interpolate;         \/\/construct the subdimensional elements of the mesh$/;"	m	struct:__anon7	file:
interpolate	src/dm/impls/mesh/examples/tutorials/ex_coarsen_3.c	/^  PetscBool interpolate;         \/\/construct the subdimensional elements of the mesh$/;"	m	struct:__anon1	file:
interpolate	src/dm/impls/plex/examples/tests/ex1.c	/^  PetscBool interpolate;           \/* Generate intermediate mesh elements *\/$/;"	m	struct:__anon4	file:
interpolate	src/dm/impls/plex/examples/tests/ex3.c	/^  PetscBool interpolate;           \/* Generate intermediate mesh elements *\/$/;"	m	struct:__anon3	file:
interpolateMesh	include/sieve/Selection.hh	/^    static Obj<mesh_type> interpolateMesh(const Obj<mesh_type>& mesh) {$/;"	f	class:ALE::Selection
interptype	include/petsc-private/dmdaimpl.h	/^  DMDAInterpolationType interptype;$/;"	m	struct:__anon23
intersection	config/BuildSystem/config/setsBackport.py	/^    def intersection(self, other):$/;"	m	class:BaseSet
intersection	config/BuildSystem/config/setsOrdered.py	/^    def intersection(self, other):$/;"	m	class:BaseSet
intersection_update	config/BuildSystem/config/setsBackport.py	/^    def intersection_update(self, other):$/;"	m	class:Set
intersection_update	config/BuildSystem/config/setsOrdered.py	/^    def intersection_update(self, other):$/;"	m	class:Set
intro_message	bin/TOPSInstaller.py	/^	intro_message = ("Pick the kind of box that you wish to demo.\\n\\n"$/;"	v
ints	include/petsc-private/threadcommimpl.h	/^  PetscInt          ints[3];                       \/* Array to hold three integer values *\/$/;"	m	struct:_p_PetscThreadCommJobCtx
intstar_idmax	include/petsc-private/petscimpl.h	/^  PetscInt             int_idmax,        intstar_idmax;$/;"	m	struct:_p_PetscObject
intstarcomposeddata	include/petsc-private/petscimpl.h	/^  PetscInt             *intcomposeddata, **intstarcomposeddata;$/;"	m	struct:_p_PetscObject
intstarcomposedstate	include/petsc-private/petscimpl.h	/^  PetscInt             *intcomposedstate,*intstarcomposedstate;$/;"	m	struct:_p_PetscObject
inuse	include/petsc-private/vecimpl.h	/^  PetscBool      inuse;                \/* prevents corruption from mixing two scatters *\/$/;"	m	struct:_p_VecScatter
inuse_set	include/petsc-private/tsimpl.h	/^    PetscBool  inuse_set;        \/* the current scheme has been set *\/$/;"	m	struct:_p_TSAdapt::__anon8
invRenumbering	include/sieve/ParallelMapping.hh	/^    renumbering_type invRenumbering;$/;"	m	class:ALE::PointFactory
invertblockdiagonal	include/petsc-private/matimpl.h	/^  PetscErrorCode (*invertblockdiagonal)(Mat,const PetscScalar**);$/;"	m	struct:_MatOps
invertpermutation	include/petsc-private/isimpl.h	/^  PetscErrorCode (*invertpermutation)(IS,PetscInt,IS*);$/;"	m	struct:_ISOps
is	config/BuildSystem/RDict.py	/^  import build.buildGraph # This is necessary for us to create BuildGraph objects on load$/;"	i
is	config/BuildSystem/RDict.py	/^  import project          # This is necessary for us to create Project objects on load$/;"	i
is	include/petscis.h	/^  IS              *is;              \/* for each color indicates columns *\/$/;"	m	struct:_n_ISColoring
isAIXAR	config/BuildSystem/config/setCompilers.py	/^  def isAIXAR(ar):$/;"	m	class:Configure
isAIXAR	config/BuildSystem/config/setCompilers.py	/^  isAIXAR = staticmethod(isAIXAR)$/;"	v	class:Configure
isBGL	config/PETSc/utilities/libraryOptions.py	/^  def isBGL(self):$/;"	m	class:Configure
isClang	config/BuildSystem/config/setCompilers.py	/^  def isClang(compiler):$/;"	m	class:Configure
isClang	config/BuildSystem/config/setCompilers.py	/^  isClang = staticmethod(isClang)$/;"	v	class:Configure
isCompaqF90	config/BuildSystem/config/setCompilers.py	/^  def isCompaqF90(compiler):$/;"	m	class:Configure
isCompaqF90	config/BuildSystem/config/setCompilers.py	/^  isCompaqF90 = staticmethod(isCompaqF90)$/;"	v	class:Configure
isCompatible	config/BuildSystem/build/fileset.py	/^  def isCompatible(self, set):$/;"	m	class:FileSet
isCompatible	config/BuildSystem/build/fileset.py	/^  def isCompatible(self, set):$/;"	m	class:RootedFileSet
isCompiled	config/BuildSystem/build/templates/usingC.py	/^  def isCompiled(self):$/;"	m	class:UsingC
isCompiled	config/BuildSystem/build/templates/usingCxx.py	/^  def isCompiled(self):$/;"	m	class:UsingCxx
isCompiled	config/BuildSystem/build/templates/usingPython.py	/^  def isCompiled(self):$/;"	m	class:UsingPython
isCone	include/sieve/ISieve.hh	/^      bool         isCone;$/;"	m	class:ALE::ISieveVisitor::TransitiveClosureVisitor
isCray	config/BuildSystem/config/setCompilers.py	/^  def isCray(compiler):$/;"	m	class:Configure
isCray	config/BuildSystem/config/setCompilers.py	/^  isCray = staticmethod(isCray)$/;"	v	class:Configure
isCrayMPI	config/PETSc/utilities/timer.py	/^  def isCrayMPI(self):$/;"	m	class:Configure
isCrayVector	config/BuildSystem/config/setCompilers.py	/^  def isCrayVector(compiler):$/;"	m	class:Configure
isCrayVector	config/BuildSystem/config/setCompilers.py	/^  isCrayVector = staticmethod(isCrayVector)$/;"	v	class:Configure
isCygwin	config/BuildSystem/config/setCompilers.py	/^  def isCygwin():$/;"	m	class:Configure
isCygwin	config/BuildSystem/config/setCompilers.py	/^  isCygwin = staticmethod(isCygwin)$/;"	v	class:Configure
isDarwin	config/BuildSystem/config/setCompilers.py	/^  def isDarwin():$/;"	m	class:Configure
isDarwin	config/BuildSystem/config/setCompilers.py	/^  isDarwin = staticmethod(isDarwin)$/;"	v	class:Configure
isFreeBSD	config/BuildSystem/config/setCompilers.py	/^  def isFreeBSD():$/;"	m	class:Configure
isFreeBSD	config/BuildSystem/config/setCompilers.py	/^  isFreeBSD = staticmethod(isFreeBSD)$/;"	v	class:Configure
isG95	config/BuildSystem/config/setCompilers.py	/^  def isG95(compiler):$/;"	m	class:Configure
isG95	config/BuildSystem/config/setCompilers.py	/^  isG95 = staticmethod(isG95)$/;"	v	class:Configure
isGNU	config/BuildSystem/config/setCompilers.py	/^  def isGNU(compiler):$/;"	m	class:Configure
isGNU	config/BuildSystem/config/setCompilers.py	/^  isGNU = staticmethod(isGNU)$/;"	v	class:Configure
isGNUPatch	bin/update.py	/^def isGNUPatch(patch):$/;"	f
isGfortran45x	config/BuildSystem/config/setCompilers.py	/^  def isGfortran45x(compiler):$/;"	m	class:Configure
isGfortran45x	config/BuildSystem/config/setCompilers.py	/^  isGfortran45x = staticmethod(isGfortran45x)$/;"	v	class:Configure
isGfortran46plus	config/BuildSystem/config/setCompilers.py	/^  def isGfortran46plus(compiler):$/;"	m	class:Configure
isGfortran46plus	config/BuildSystem/config/setCompilers.py	/^  isGfortran46plus = staticmethod(isGfortran46plus)$/;"	v	class:Configure
isIBM	config/BuildSystem/config/setCompilers.py	/^  def isIBM(compiler):$/;"	m	class:Configure
isIBM	config/BuildSystem/config/setCompilers.py	/^  isIBM = staticmethod(isIBM)$/;"	v	class:Configure
isImplementationFile	config/BuildSystem/build/bk.py	/^  def isImplementationFile(self, filename):$/;"	m	class:Tag
isIntel	config/BuildSystem/config/setCompilers.py	/^  def isIntel(compiler):$/;"	m	class:Configure
isIntel	config/BuildSystem/config/setCompilers.py	/^  isIntel = staticmethod(isIntel)$/;"	v	class:Configure
isLeaf	include/sieve/Mesh.hh	/^      bool        isLeaf;$/;"	m	class:ALE::IBundle::BinaryStratifyVisitor
isLinux	config/BuildSystem/config/setCompilers.py	/^  def isLinux():$/;"	m	class:Configure
isLinux	config/BuildSystem/config/setCompilers.py	/^  isLinux = staticmethod(isLinux)$/;"	v	class:Configure
isLoading	config/BuildSystem/sourceDatabase.py	/^  isLoading = 0$/;"	v	class:SourceDB
isLocal	include/sieve/INumbering.hh	/^    virtual bool isLocal(const point_type& p) {return this->restrictPoint(p)[0].first >= 0;};$/;"	f	class:ALE::IGlobalOrder
isLocal	include/sieve/INumbering.hh	/^    virtual bool isLocal(const point_type& point) {return this->restrictPoint(point)[0] >= 0;};$/;"	f	class:ALE::INumbering
isLocal	include/sieve/Numbering.hh	/^    virtual bool isLocal(const point_type& p) {return this->restrictPoint(p)[0].prefix >= 0;};$/;"	f	class:ALE::GlobalOrder
isLocal	include/sieve/Numbering.hh	/^    virtual bool isLocal(const point_type& point) {return this->restrictPoint(point)[0] >= 0;};$/;"	f	class:ALE::Numbering
isModified	include/sieve/Mesh.hh	/^      bool isModified() const {return this->modifiedPoints.size() > 0;};$/;"	f	class:ALE::IBundle::DepthVisitor
isModified	include/sieve/Mesh.hh	/^      bool isModified() const {return this->modifiedPoints.size() > 0;};$/;"	f	class:ALE::IBundle::HeightVisitor
isNAG	config/BuildSystem/config/setCompilers.py	/^  def isNAG(compiler):$/;"	m	class:Configure
isNAG	config/BuildSystem/config/setCompilers.py	/^  isNAG = staticmethod(isNAG)$/;"	v	class:Configure
isNull	include/sieve/ALE_mem.hh	/^    bool isNull() const {return (this->objPtr == NULL);};$/;"	f	class:ALE::Obj
isPGI	config/BuildSystem/config/setCompilers.py	/^  def isPGI(compiler):$/;"	m	class:Configure
isPGI	config/BuildSystem/config/setCompilers.py	/^  isPGI = staticmethod(isPGI)$/;"	v	class:Configure
isRemote	include/sieve/INumbering.hh	/^    virtual bool isRemote(const point_type& p) {return this->restrictPoint(p)[0].first < 0;};$/;"	f	class:ALE::IGlobalOrder
isRemote	include/sieve/INumbering.hh	/^    virtual bool isRemote(const point_type& point) {return this->restrictPoint(point)[0] < 0;};$/;"	f	class:ALE::INumbering
isRemote	include/sieve/Numbering.hh	/^    virtual bool isRemote(const point_type& p) {return this->restrictPoint(p)[0].prefix < 0;};$/;"	f	class:ALE::GlobalOrder
isRemote	include/sieve/Numbering.hh	/^    virtual bool isRemote(const point_type& point) {return this->restrictPoint(point)[0] < 0;};$/;"	f	class:ALE::Numbering
isSolaris	config/BuildSystem/config/setCompilers.py	/^  def isSolaris():$/;"	m	class:Configure
isSolaris	config/BuildSystem/config/setCompilers.py	/^  isSolaris = staticmethod(isSolaris)$/;"	v	class:Configure
isSolarisAR	config/BuildSystem/config/setCompilers.py	/^  def isSolarisAR(ar):$/;"	m	class:Configure
isSolarisAR	config/BuildSystem/config/setCompilers.py	/^  isSolarisAR = staticmethod(isSolarisAR)$/;"	v	class:Configure
isSun	config/BuildSystem/config/setCompilers.py	/^  def isSun(compiler):$/;"	m	class:Configure
isSun	config/BuildSystem/config/setCompilers.py	/^  isSun = staticmethod(isSun)$/;"	v	class:Configure
isValueSet	config/BuildSystem/nargs.py	/^  def isValueSet(self):$/;"	m	class:Arg
isWindows	config/BuildSystem/config/setCompilers.py	/^  def isWindows(compiler):$/;"	m	class:Configure
isWindows	config/BuildSystem/config/setCompilers.py	/^  isWindows = staticmethod(isWindows)$/;"	v	class:Configure
is_copy	include/petsc-private/vecimpl.h	/^  PetscBool      is_copy;$/;"	m	struct:__anon26
is_empty	config/BuildSystem/patch.py	/^      def is_empty(self):$/;"	m	class:PatchSet.parse.wrapumerate
isabs	config/BuildSystem/patch.py	/^from os.path import exists, isabs, isfile, abspath, normpath$/;"	i
isection	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^  PetscBool  isection;    \/\/ Run the ISection tests$/;"	m	struct:__anon14	file:
isection	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^  PetscBool  isection;    \/\/ Run the ISection tests$/;"	m	struct:__anon5	file:
isection	src/dm/impls/mesh/examples/tests/unitTests.cxx	/^  PetscBool  isection;      \/\/ Run the ISection tests$/;"	m	struct:__anon23	file:
isfile	config/BuildSystem/patch.py	/^from os.path import exists, isabs, isfile, abspath, normpath$/;"	i
ishermitian	include/petsc-private/matimpl.h	/^  PetscErrorCode (*ishermitian)(Mat,PetscReal,PetscBool *);$/;"	m	struct:_MatOps
isidentity	include/petsc-private/isimpl.h	/^  PetscBool    isidentity;$/;"	m	struct:_p_IS
isieve	src/dm/impls/mesh/examples/tests/unitTests.cxx	/^  PetscBool  isieve;        \/\/ Run the ISieve tests$/;"	m	struct:__anon23	file:
isnothread	include/petsc-private/threadcommimpl.h	/^  PetscBool               isnothread;   \/* No threading model used *\/$/;"	m	struct:_p_PetscThreadComm
isperm	include/petsc-private/isimpl.h	/^  PetscBool    isperm;          \/* if is a permutation *\/$/;"	m	struct:_p_IS
isstructurallysymmetric	include/petsc-private/matimpl.h	/^  PetscErrorCode (*isstructurallysymmetric)(Mat,PetscBool *);$/;"	m	struct:_MatOps
issubset	config/BuildSystem/config/setsBackport.py	/^    def issubset(self, other):$/;"	m	class:BaseSet
issubset	config/BuildSystem/config/setsOrdered.py	/^    def issubset(self, other):$/;"	m	class:BaseSet
issuperset	config/BuildSystem/config/setsBackport.py	/^    def issuperset(self, other):$/;"	m	class:BaseSet
issuperset	config/BuildSystem/config/setsOrdered.py	/^    def issuperset(self, other):$/;"	m	class:BaseSet
issymmetric	include/petsc-private/matimpl.h	/^  PetscErrorCode (*issymmetric)(Mat,PetscReal,PetscBool *);$/;"	m	struct:_MatOps
itemType	include/petsc-private/characteristicimpl.h	/^  MPI_Datatype itemType;        \/* Type corresponding to the item struct *\/$/;"	m	struct:_p_Characteristic
items	config/BuildSystem/RDict.py	/^  def items(self):$/;"	m	class:RDict
items	config/BuildSystem/sourceDatabase.py	/^  def items(self):$/;"	m	class:SourceDB
items	include/sieve/ALE_mem.hh	/^      std::map<std::string, long long> items;$/;"	m	struct:ALE::MemoryLogger::Log
iter	include/petsc-private/snesimpl.h	/^  PetscInt    iter;               \/* global iteration number *\/$/;"	m	struct:_p_SNES
iterator	include/sieve/ALE_containers.hh	/^      iterator(const iterator& iter)                          : _sequence(iter._sequence),_itor(iter._itor) {}$/;"	f	class:ALE::IndexSequence::iterator
iterator	include/sieve/ALE_containers.hh	/^      iterator(sequence_type& sequence, itor_type itor)       : _sequence(sequence),_itor(itor) {};$/;"	f	class:ALE::IndexSequence::iterator
iterator	include/sieve/ALE_containers.hh	/^    class iterator {$/;"	c	struct:ALE::IndexSequence
iterator	include/sieve/ALE_containers.hh	/^    typedef typename super::iterator                                                   iterator;$/;"	t	class:ALE::set
iterator	include/sieve/CartesianSieve.hh	/^        iterator(const int dim, const int sizes[], const int cellSizes[], const int numCells, const value_type indices[], const int pos, const bool addSelf = false) : _dim(dim), _sizes(sizes), _cellSizes(cellSizes), _numCells(numCells), _pos(pos) {$/;"	f	class:ALE::CartesianSieveDef::ConeSequence::iterator
iterator	include/sieve/CartesianSieve.hh	/^        iterator(const int dim, const int sizes[], const value_type indices[], const int pos) : _dim(dim), _sizes(sizes), _pos(pos) {$/;"	f	class:ALE::CartesianSieveDef::SupportSequence::iterator
iterator	include/sieve/CartesianSieve.hh	/^        iterator(const iterator& iter) : _dim(iter._dim), _sizes(iter._sizes), _cellSizes(iter._cellSizes), _numCells(iter._numCells), _pos(iter._pos) {$/;"	f	class:ALE::CartesianSieveDef::ConeSequence::iterator
iterator	include/sieve/CartesianSieve.hh	/^        iterator(const iterator& iter) : _dim(iter._dim), _sizes(iter._sizes), _pos(iter._pos) {$/;"	f	class:ALE::CartesianSieveDef::SupportSequence::iterator
iterator	include/sieve/CartesianSieve.hh	/^        iterator(const iterator& iter) : _value(iter._value) {};$/;"	f	class:ALE::CartesianSieveDef::PointSequence::iterator
iterator	include/sieve/CartesianSieve.hh	/^        iterator(const value_type& start) : _value(start) {};$/;"	f	class:ALE::CartesianSieveDef::PointSequence::iterator
iterator	include/sieve/CartesianSieve.hh	/^      class iterator {$/;"	c	class:ALE::CartesianSieveDef::ConeSequence
iterator	include/sieve/CartesianSieve.hh	/^      class iterator {$/;"	c	class:ALE::CartesianSieveDef::PointSequence
iterator	include/sieve/CartesianSieve.hh	/^      class iterator {$/;"	c	class:ALE::CartesianSieveDef::SupportSequence
iterator	include/sieve/ISieve.hh	/^      typedef const_iterator iterator;$/;"	t	class:ALE::IFSieveDef::Sequence
iterator	include/sieve/LabelSifter.hh	/^          iterator(const typename traits::iterator::itor_type& itor) : traits::iterator(itor) {};$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence::iterator
iterator	include/sieve/LabelSifter.hh	/^        class iterator : public traits::iterator {$/;"	c	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
iterator	include/sieve/LabelSifter.hh	/^        iterator(const itor_type& itor) : iterator_base(itor) {};$/;"	f	class:ALE::NewSifterDef::IndexSequenceTraits::iterator
iterator	include/sieve/LabelSifter.hh	/^        typedef typename base_type::iterator iterator;$/;"	t	struct:ALE::LabelSifter::__anon7::coneSequence
iterator	include/sieve/LabelSifter.hh	/^        typedef typename base_type::iterator iterator;$/;"	t	struct:ALE::LabelSifter::__anon7::supportSequence
iterator	include/sieve/LabelSifter.hh	/^      class iterator : public iterator_base {$/;"	c	struct:ALE::NewSifterDef::IndexSequenceTraits
iterator	include/sieve/LabelSifter.hh	/^      typedef typename base_traits::iterator        iterator;$/;"	t	struct:ALE::NewSifterDef::ReversibleIndexSequenceTraits
iterator	include/sieve/Overlap.hh	/^    iterator(const iterator& iter) : points(iter.points), remotePoints(iter.remotePoints) {};$/;"	f	class:PETSc::DualSequence::iterator
iterator	include/sieve/Overlap.hh	/^    iterator(const value_type *points, const color_type *remotePoints) : points(points), remotePoints(remotePoints) {};$/;"	f	class:PETSc::DualSequence::iterator
iterator	include/sieve/Overlap.hh	/^  class iterator {$/;"	c	class:PETSc::DualSequence
iterator	include/sieve/Overlap.hh	/^  typedef Value *iterator;$/;"	t	class:PETSc::Sequence
iterator	include/sieve/Overlap.hh	/^  typedef const Value *iterator;$/;"	t	class:PETSc::PointerSequence
iterator	include/sieve/Sieve.hh	/^         iterator(const typename traits::iterator::itor_type& itor) : traits::iterator(itor) {};$/;"	f	class:ALE::SieveDef::RecContainerTraits::PointSequence::iterator
iterator	include/sieve/Sieve.hh	/^         iterator(const typename traits::iterator::itor_type& itor) : traits::iterator(itor) {};$/;"	f	class:ALE::SieveDef::RecContainerTraits::TwoValueSequence::iterator
iterator	include/sieve/Sieve.hh	/^         iterator(const typename traits::iterator::itor_type& itor) : traits::iterator(itor) {};$/;"	f	class:ALE::SieveDef::RecContainerTraits::ValueSequence::iterator
iterator	include/sieve/Sieve.hh	/^       class iterator : public traits::iterator {$/;"	c	class:ALE::SieveDef::RecContainerTraits::PointSequence
iterator	include/sieve/Sieve.hh	/^       class iterator : public traits::iterator {$/;"	c	class:ALE::SieveDef::RecContainerTraits::TwoValueSequence
iterator	include/sieve/Sieve.hh	/^       class iterator : public traits::iterator {$/;"	c	class:ALE::SieveDef::RecContainerTraits::ValueSequence
iterator	include/sieve/Sifter.hh	/^          iterator(const typename traits::iterator::itor_type& itor) : traits::iterator(itor) {};$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence::iterator
iterator	include/sieve/Sifter.hh	/^         iterator(const typename traits::iterator::itor_type& itor) : traits::iterator(itor) {};$/;"	f	class:ALE::SifterDef::RecContainerTraits::PointSequence::iterator
iterator	include/sieve/Sifter.hh	/^        class iterator : public traits::iterator {$/;"	c	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
iterator	include/sieve/Sifter.hh	/^        iterator(const itor_type& itor) : iterator_base(itor) {};$/;"	f	class:ALE::SifterDef::IndexSequenceTraits::iterator
iterator	include/sieve/Sifter.hh	/^        typedef typename base_type::iterator iterator;$/;"	t	struct:ALE::ASifter::__anon2::coneSequence
iterator	include/sieve/Sifter.hh	/^        typedef typename base_type::iterator iterator;$/;"	t	struct:ALE::ASifter::__anon2::supportSequence
iterator	include/sieve/Sifter.hh	/^       class iterator : public traits::iterator {$/;"	c	class:ALE::SifterDef::RecContainerTraits::PointSequence
iterator	include/sieve/Sifter.hh	/^      class iterator : public iterator_base {$/;"	c	struct:ALE::SifterDef::IndexSequenceTraits
iterator	include/sieve/Sifter.hh	/^      typedef typename base_traits::iterator        iterator;$/;"	t	struct:ALE::SifterDef::ReversibleIndexSequenceTraits
iterator_base	include/sieve/LabelSifter.hh	/^        iterator_base(itor_type itor) {$/;"	f	class:ALE::NewSifterDef::IndexSequenceTraits::iterator_base
iterator_base	include/sieve/LabelSifter.hh	/^      class iterator_base {$/;"	c	struct:ALE::NewSifterDef::IndexSequenceTraits
iterator_base	include/sieve/LabelSifter.hh	/^      typedef typename base_traits::iterator_base   iterator_base;$/;"	t	struct:ALE::NewSifterDef::ReversibleIndexSequenceTraits
iterator_base	include/sieve/Sifter.hh	/^        iterator_base(itor_type itor) {$/;"	f	class:ALE::SifterDef::IndexSequenceTraits::iterator_base
iterator_base	include/sieve/Sifter.hh	/^      class iterator_base {$/;"	c	struct:ALE::SifterDef::IndexSequenceTraits
iterator_base	include/sieve/Sifter.hh	/^      typedef typename base_traits::iterator_base   iterator_base;$/;"	t	struct:ALE::SifterDef::ReversibleIndexSequenceTraits
iterator_category	include/sieve/ALE_containers.hh	/^      typedef std::input_iterator_tag                iterator_category;$/;"	t	class:ALE::IndexSequence::iterator
iterator_category	include/sieve/CartesianSieve.hh	/^        typedef std::input_iterator_tag iterator_category;$/;"	t	class:ALE::CartesianSieveDef::ConeSequence::iterator
iterator_category	include/sieve/CartesianSieve.hh	/^        typedef std::input_iterator_tag iterator_category;$/;"	t	class:ALE::CartesianSieveDef::PointSequence::iterator
iterator_category	include/sieve/CartesianSieve.hh	/^        typedef std::input_iterator_tag iterator_category;$/;"	t	class:ALE::CartesianSieveDef::SupportSequence::iterator
iterator_category	include/sieve/ISieve.hh	/^        typedef std::input_iterator_tag iterator_category;$/;"	t	class:ALE::IFSieveDef::Sequence::const_iterator
iterator_category	include/sieve/LabelSifter.hh	/^        typedef std::input_iterator_tag                iterator_category;$/;"	t	class:ALE::NewSifterDef::IndexSequenceTraits::iterator_base
iterator_category	include/sieve/LabelSifter.hh	/^        typedef typename iterator_base::iterator_category  iterator_category;$/;"	t	class:ALE::NewSifterDef::IndexSequenceTraits::iterator
iterator_category	include/sieve/LabelSifter.hh	/^        typedef typename iterator_base::iterator_category  iterator_category;$/;"	t	class:ALE::NewSifterDef::ReversibleIndexSequenceTraits::reverse_iterator
iterator_category	include/sieve/Sifter.hh	/^        typedef std::input_iterator_tag                iterator_category;$/;"	t	class:ALE::SifterDef::IndexSequenceTraits::iterator_base
iterator_category	include/sieve/Sifter.hh	/^        typedef typename iterator_base::iterator_category  iterator_category;$/;"	t	class:ALE::SifterDef::IndexSequenceTraits::iterator
iterator_category	include/sieve/Sifter.hh	/^        typedef typename iterator_base::iterator_category  iterator_category;$/;"	t	class:ALE::SifterDef::ReversibleIndexSequenceTraits::reverse_iterator
iters	src/dm/impls/mesh/examples/tests/sifter1.cxx	/^  PetscInt iters; \/\/ The number of test repetitions$/;"	m	struct:__anon8	file:
iters	src/dm/impls/mesh/examples/tests/stl1.cxx	/^  int iters;    \/\/ The number of test repetitions$/;"	m	struct:__anon2	file:
itor_type	include/sieve/ALE_containers.hh	/^      typedef typename index_type::iterator          itor_type;$/;"	t	class:ALE::IndexSequence::iterator
itor_type	include/sieve/LabelSifter.hh	/^        typedef typename index_type::iterator          itor_type;$/;"	t	class:ALE::NewSifterDef::IndexSequenceTraits::iterator_base
itor_type	include/sieve/LabelSifter.hh	/^        typedef typename iterator_base::itor_type          itor_type;$/;"	t	class:ALE::NewSifterDef::IndexSequenceTraits::iterator
itor_type	include/sieve/LabelSifter.hh	/^        typedef typename iterator_base::itor_type          itor_type;$/;"	t	class:ALE::NewSifterDef::ReversibleIndexSequenceTraits::reverse_iterator
itor_type	include/sieve/Sifter.hh	/^        typedef typename index_type::iterator          itor_type;$/;"	t	class:ALE::SifterDef::IndexSequenceTraits::iterator_base
itor_type	include/sieve/Sifter.hh	/^        typedef typename iterator_base::itor_type          itor_type;$/;"	t	class:ALE::SifterDef::IndexSequenceTraits::iterator
itor_type	include/sieve/Sifter.hh	/^        typedef typename iterator_base::itor_type          itor_type;$/;"	t	class:ALE::SifterDef::ReversibleIndexSequenceTraits::reverse_iterator
its	include/petsc-private/kspimpl.h	/^  PetscInt       its;       \/* number of iterations so far computed *\/$/;"	m	struct:_p_KSP
j	bin/matlab/classes/matlabheader.h	/^    int k,j,i,c;$/;"	m	struct:__anon1
j	include/petsc-private/characteristicimpl.h	/^  int           i, j; \/* The vertex for which we need field values *\/$/;"	m	struct:_p_Item
j	include/petscmat.h	/^  PetscInt k,j,i,c;$/;"	m	struct:__anon89
j	include/sieve/ISieve.hh	/^      PetscInt           *j;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
j	include/sieve/ISieve.hh	/^      PetscInt          *j;$/;"	m	class:ALE::ISieveVisitor::UpdateVecVisitor
jac	bin/TOPSGenerator.py	/^          jac = buttonbox(message="Will you provide analytic Jacobian?", title=title, choices = ["No", "Yes"],fontSize = 20,message2="Otherwise it will be computed via finite differencing")$/;"	v
jacobian	include/petsc-private/snesimpl.h	/^  Mat  jacobian;                 \/* Jacobian matrix *\/$/;"	m	struct:_p_SNES
jacobian_pre	include/petsc-private/snesimpl.h	/^  Mat  jacobian_pre;             \/* preconditioner matrix *\/$/;"	m	struct:_p_SNES
jacobianctx	include/petsc-private/snesimpl.h	/^  void *jacobianctx;$/;"	m	struct:_p_DMSNES
job_ctr	include/petsc-private/threadcommimpl.h	/^  PetscInt                job_ctr;      \/* which job is this threadcomm running in the job queue *\/$/;"	m	struct:_p_PetscThreadComm
job_status	include/petsc-private/threadcommimpl.h	/^  PetscInt          *job_status;                   \/* Thread job status *\/$/;"	m	struct:_p_PetscThreadCommJobCtx
jobs	include/petsc-private/threadcommimpl.h	/^  PetscThreadCommJobCtx jobs;                           \/* queue of jobs *\/$/;"	m	struct:_p_PetscThreadCommJobQueue
join	include/sieve/ALE_containers.hh	/^    inline void join(Obj<set> s) {$/;"	f	class:ALE::set
join	include/sieve/ISieve.hh	/^    void join(const Sequence& points, Visitor& v) const {$/;"	f	class:ALE::IFSieve
join	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportSet> Sieve<Point_,Marker_,Color_>::join(const Obj<InputSequence>& chain0, const Obj<InputSequence>& chain1) {$/;"	f	class:ALE::Sieve
join	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportSet> Sieve<Point_,Marker_,Color_>::join(const Obj<InputSequence>& chain0, const Obj<InputSequence>& chain1, const Color_& color) {$/;"	f	class:ALE::Sieve
join	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportSet> Sieve<Point_,Marker_,Color_>::join(const Point_& p, const Point_& q) {$/;"	f	class:ALE::Sieve
join	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportSet> Sieve<Point_,Marker_,Color_>::join(const Point_& p, const Point_& q, const Color_& color) {$/;"	f	class:ALE::Sieve
joinTmpA	include/petsc-private/meshimpl.h	/^  PetscInt            *joinTmpA,    *joinTmpB;    \/* Work space for join operation *\/$/;"	m	struct:__anon16
joinTmpB	include/petsc-private/meshimpl.h	/^  PetscInt            *joinTmpA,    *joinTmpB;    \/* Work space for join operation *\/$/;"	m	struct:__anon16
json	include/web/AMSSnoopStack.py	/^import json$/;"	i
k	bin/matlab/classes/matlabheader.h	/^    int k,j,i,c;$/;"	m	struct:__anon1
k	include/petscmat.h	/^  PetscInt k,j,i,c;$/;"	m	struct:__anon89
keeplambda	include/petsc-private/linesearchimpl.h	/^  PetscBool           keeplambda;$/;"	m	struct:_p_LineSearch
kernel_ctr	include/petsc-private/threadcommimpl.h	/^  PetscInt kernel_ctr;                                  \/* kernel counter .. need this otherwise race conditions are unavoidable *\/$/;"	m	struct:_p_PetscThreadCommJobQueue
key	include/sieve/LabelSifter.hh	/^        key_type                                                  key;$/;"	m	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
key	include/sieve/Sifter.hh	/^        key_type                                                  key;$/;"	m	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
key_type	include/sieve/LabelSifter.hh	/^        typedef Key_                                                    key_type;$/;"	t	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
key_type	include/sieve/Sifter.hh	/^        typedef Key_                                                    key_type;$/;"	t	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
keys	config/BuildSystem/RDict.py	/^  def keys(self):$/;"	m	class:RDict
keys	config/BuildSystem/sourceDatabase.py	/^  def keys(self):$/;"	m	class:SourceDB
keytable	include/petscctable.h	/^  PetscInt *keytable;$/;"	m	struct:_n_PetscTable
ksp	include/petsc-private/kspimpl.h	/^typedef struct {PetscInt model,curl,maxl;Mat mat; KSP ksp;}* KSPGuessFischer;$/;"	m	struct:__anon18
ksp	include/petsc-private/snesimpl.h	/^  KSP  ksp;                      \/* linear solver context *\/$/;"	m	struct:_p_SNES
ksp	include/petscksp.h	/^typedef struct _p_KSPFischerGuess {PetscInt method,curl,maxl,refcnt;PetscBool  monitor;Mat mat; KSP ksp;}* KSPFischerGuess;$/;"	m	struct:_p_KSPFischerGuess
ksp_ewconv	include/petsc-private/snesimpl.h	/^  PetscBool   ksp_ewconv;        \/* flag indicating use of Eisenstat-Walker KSP convergence criteria *\/$/;"	m	struct:_p_SNES
ksp_its	include/petsc-private/tsimpl.h	/^  PetscInt  ksp_its;                \/* total number of linear solver iterations *\/$/;"	m	struct:_p_TS
kspconvctx	include/petsc-private/snesimpl.h	/^  void        *kspconvctx;       \/* Eisenstat-Walker KSP convergence context *\/$/;"	m	struct:_p_SNES
label	include/sieve/ISieve.hh	/^      Label& label;$/;"	m	class:ALE::ISieveVisitor::MarkVisitor
label	include/sieve/Mesh.hh	/^      label_type& label;$/;"	m	class:ALE::IBundle::LabelVisitor
label	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^  PetscBool  label;       \/\/ Run the label tests$/;"	m	struct:__anon5	file:
label	src/dm/impls/mesh/examples/tests/sieveTests.cxx	/^  PetscBool  label;         \/\/ Run the Label tests$/;"	m	struct:__anon11	file:
label_sequence	include/sieve/CartesianSieve.hh	/^    typedef CartesianBundle::label_sequence    label_sequence;$/;"	t	class:ALE::CartesianMesh
label_sequence	include/sieve/CartesianSieve.hh	/^    typedef sieve_type::baseSequence                                  label_sequence;$/;"	t	class:ALE::CartesianBundle
label_sequence	include/sieve/Mesh.hh	/^    typedef typename base_type::label_sequence        label_sequence;$/;"	t	class:ALE::IMesh
label_sequence	include/sieve/Mesh.hh	/^    typedef typename base_type::label_sequence        label_sequence;$/;"	t	class:ALE::Mesh
label_sequence	include/sieve/Mesh.hh	/^    typedef typename label_type::supportSequence                      label_sequence;$/;"	t	class:ALE::Bundle
label_sequence	include/sieve/Mesh.hh	/^    typedef typename label_type::supportSequence                      label_sequence;$/;"	t	class:ALE::IBundle
label_sequence	include/sieve/Topology.hh	/^    typedef typename patch_label_type::supportSequence                       label_sequence;$/;"	t	class:ALE::Topology
label_sequence	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^typedef ALE::Mesh::topology_type::label_sequence        label_sequence;$/;"	t	namespace:ALE::Hierarchy
label_type	include/sieve/Mesh.hh	/^    typedef Label_                                                    label_type;$/;"	t	class:ALE::IBundle
label_type	include/sieve/Mesh.hh	/^    typedef typename ALE::LabelSifter<int, point_type>                label_type;$/;"	t	class:ALE::Bundle
label_type	include/sieve/Mesh.hh	/^    typedef typename base_type::label_type            label_type;$/;"	t	class:ALE::IMesh
label_type	include/sieve/Mesh.hh	/^    typedef typename base_type::label_type            label_type;$/;"	t	class:ALE::Mesh
label_type	include/sieve/Numbering.hh	/^    typedef typename bundle_type::label_type                label_type;$/;"	t	class:ALE::NumberingFactory
label_type	include/sieve/Sections.hh	/^    typedef Label_                                    label_type;$/;"	t	class:ALE::LabelBaseSection
label_type	include/sieve/Sections.hh	/^    typedef Label_                                    label_type;$/;"	t	class:ALE::LabelBaseSectionV
label_type	include/sieve/Sections.hh	/^    typedef Label_                              label_type;$/;"	t	class:ALE::LabelSection
label_type	include/sieve/Topology.hh	/^    typedef typename std::map<patch_type, Obj<patch_label_type>, std::less<patch_type>, pair2_alloc_type>     label_type;$/;"	t	class:ALE::Topology
label_type	src/dm/impls/mesh/examples/tests/mesh1.cxx	/^typedef ALE::Mesh::label_type        label_type;$/;"	t	file:
labels	include/petsc-private/dmpleximpl.h	/^  DMLabel              labels;            \/* Linked list of labels *\/$/;"	m	struct:__anon30
labels	include/petsc-private/meshimpl.h	/^  SieveLabel           labels;         \/* Linked list of labels *\/$/;"	m	struct:__anon16
labels_type	include/sieve/Mesh.hh	/^    typedef typename base_type::labels_type           labels_type;$/;"	t	class:ALE::IMesh
labels_type	include/sieve/Mesh.hh	/^    typedef typename std::map<const std::string, Obj<label_type> >    labels_type;$/;"	t	class:ALE::Bundle
labels_type	include/sieve/Mesh.hh	/^    typedef typename std::map<const std::string, Obj<label_type> >    labels_type;$/;"	t	class:ALE::IBundle
labels_type	include/sieve/Topology.hh	/^    typedef typename std::map<const std::string, label_type, std::less<const std::string>, pair4_alloc_type>  labels_type;$/;"	t	class:ALE::Topology
lagjacobian	include/petsc-private/snesimpl.h	/^  PetscInt    lagjacobian;        \/* SNESSetLagJacobian() *\/$/;"	m	struct:_p_SNES
lagnorm	include/petsc-private/kspimpl.h	/^  PetscBool     lagnorm;             \/* Lag the residual norm calculation so that it is computed as part of the$/;"	m	struct:_p_KSP
lagpreconditioner	include/petsc-private/snesimpl.h	/^  PetscInt    lagpreconditioner;  \/* SNESSetLagPreconditioner() *\/$/;"	m	struct:_p_SNES
lagrange	config/BuildSystem/config/packages/fiat.py	/^        import FIAT.lagrange$/;"	i
lagrange	config/PETSc/FEM.py	/^      from FIAT.Lagrange import lagrange$/;"	i
lambda	include/petsc-private/linesearchimpl.h	/^  PetscReal           lambda;$/;"	m	struct:_p_LineSearch
languageNames	config/BuildSystem/maker.py	/^  languageNames = {'C': 'C', 'Cxx': 'Cxx', 'FC': 'Fortran', 'Python': 'Python'}$/;"	v	class:BasicMake
last	include/sieve/ALE_containers.hh	/^    inline iterator last() {$/;"	f	class:ALE::set
lastCorn	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^  ALE::Mesh::point_type lastCorn;    \/\/the last corner seen.  as we string along we will connect these two in the new topology definition$/;"	m	struct:ALE::Hierarchy::bound_trav
lastCorn	src/dm/impls/mesh/examples/tutorials/id_bound.h	/^  ALE::Mesh::point_type lastCorn;      \/\/the last corner seen.  as we string along we will connect these two in the new topology definition$/;"	m	struct:ALE::Coarsener::bound_trav
lastEdge	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^  ALE::Mesh::point_type lastEdge;     \/\/a HACK to keep edges from getting duplicated.$/;"	m	struct:ALE::Hierarchy::bound_trav
lastEdge	src/dm/impls/mesh/examples/tutorials/id_bound.h	/^  ALE::Mesh::point_type lastEdge;       \/\/a HACK to keep edges from getting duplicated.$/;"	m	struct:ALE::Coarsener::bound_trav
lastNode	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^  ALE::Mesh::point_type lastNode;    \/\/the last node seen, so we do not backtrace.$/;"	m	struct:ALE::Hierarchy::bound_trav
lastNode	src/dm/impls/mesh/examples/tutorials/id_bound.h	/^  ALE::Mesh::point_type lastNode;      \/\/the last node seen, so we do not backtrace.$/;"	m	struct:ALE::Coarsener::bound_trav
leader	include/petsc-private/threadcommimpl.h	/^  PetscInt                leader;       \/* Rank of the leader thread. This thread manages$/;"	m	struct:_p_PetscThreadComm
leaves	include/sieve/CartesianSieve.hh	/^    Obj<baseSequence> leaves() {$/;"	f	class:ALE::CartesianSieve
leaves	include/sieve/Field.hh	/^    const Obj<baseSequence>& leaves() {return this->_points;}$/;"	f	class:ALE::DiscreteSieve
leaves	include/sieve/ISieve.hh	/^    void leaves(Visitor& v) const {$/;"	f	class:ALE::IFSieve
leaves	include/sieve/ISieve.hh	/^    void leaves(const Visitor& v) const {$/;"	f	class:ALE::IFSieve
leaves	include/sieve/Sieve.hh	/^      Obj<typename traits::heightSequence> leaves() {$/;"	f	class:ALE::Sieve
length	include/petscsys.hh	/^    inline value_type length() const {value_type l = 0.0; for(int d = 0; d < dim; ++d) {l += x[d]*x[d];} return sqrt(l);};$/;"	f	struct:PETSc::Point
length	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^  int                   length;$/;"	m	struct:ALE::Hierarchy::bound_trav
length	src/dm/impls/mesh/examples/tutorials/id_bound.h	/^  int                   length;$/;"	m	struct:ALE::Coarsener::bound_trav
lessPair	include/sieve/ParallelMapping.hh	/^    struct lessPair: public std::binary_function<std::pair<T,T>, std::pair<T,T>, bool> {$/;"	s	class:ALE::OverlapBuilder
lessThan	include/petscsys.hh	/^    static bool lessThan(const Point& a, const Point &b) {$/;"	f	struct:PETSc::Point
less_than	include/sieve/ALE_containers.hh	/^    class less_than {$/;"	c	class:ALE::Pair
less_than	include/sieve/ALE_containers.hh	/^    class less_than {$/;"	c	class:ALE::Point
less_than	include/sieve/ALE_containers.hh	/^    class less_than {$/;"	c	struct:ALE::MinimalArrow
leveldown	include/petsc-private/dmimpl.h	/^  PetscInt                levelup,leveldown;  \/* if the DM has been obtained by refining (or coarsening) this indicates how many times that process has been used to generate this DM *\/$/;"	m	struct:_p_DM
levels	include/petscmat.h	/^  PetscReal     levels;         \/* ICC\/ILU(levels) *\/$/;"	m	struct:__anon96
levels	src/dm/impls/mesh/examples/tutorials/ex_coarsen.c	/^  PetscInt  levels;              \/\/ The number of levels in the hierarchy$/;"	m	struct:__anon7	file:
levels	src/dm/impls/mesh/examples/tutorials/ex_coarsen_2.c	/^  PetscInt  levels;              \/\/ The number of levels in the hierarchy$/;"	m	struct:__anon8	file:
levels	src/dm/impls/mesh/examples/tutorials/ex_coarsen_3.c	/^  PetscInt  levels;              \/\/ The number of levels in the hierarchy$/;"	m	struct:__anon1	file:
levelup	include/petsc-private/dmimpl.h	/^  PetscInt                levelup,leveldown;  \/* if the DM has been obtained by refining (or coarsening) this indicates how many times that process has been used to generate this DM *\/$/;"	m	struct:_p_DM
lf	include/petsc-private/dmdaimpl.h	/^  PetscErrorCode (*lf)(DM, Vec, Vec, void *);$/;"	m	struct:__anon23
lf	include/petsc-private/meshimpl.h	/^  DMMeshLocalFunction1 lf;$/;"	m	struct:__anon16
lib	config/BuildSystem/config/packages/PETSc.py	/^  lib = property(getLib, doc = 'The PETSc libraries')$/;"	v	class:Configure
lib	config/PETSc/petsc.py	/^  lib = property(getLib, doc = 'The PETSc libraries')$/;"	v	class:Configure
libExt	config/BuildSystem/build/processor.py	/^  libExt = property(getLibExt, Linker.setLibExt, doc = 'The library extension')$/;"	v	class:ImportSharedLinker
libExt	config/BuildSystem/build/processor.py	/^  libExt = property(getLibExt, Linker.setLibExt, doc = 'The library extension')$/;"	v	class:SharedLinker
libExt	config/BuildSystem/build/processor.py	/^  libExt = property(getLibExt, setLibExt, doc = 'The library extension')$/;"	v	class:Linker
libpath	config/PETSc/Configure.py	/^    def libpath(lib):$/;"	f	function:Configure.dumpCMakeConfig
libraries	config/BuildSystem/config/compile/C.py	/^import config.libraries$/;"	i
libraries	config/BuildSystem/config/compile/CUDA.py	/^import config.libraries$/;"	i
libraries	config/BuildSystem/config/compile/Cxx.py	/^import config.libraries$/;"	i
libraries	config/BuildSystem/config/compile/FC.py	/^import config.libraries$/;"	i
libraries	config/BuildSystem/script.py	/^  libraries = property(getLibraries, doc = 'The config.libraries configure object')$/;"	v	class:LanguageProcessor
libraryGuesses	config/BuildSystem/config/packages/PETSc.py	/^  def libraryGuesses(self, root = None):$/;"	m	class:Configure
libraryGuesses	config/PETSc/petsc.py	/^  def libraryGuesses(self, root = None):$/;"	m	class:Configure
limit	include/sieve/ISieve.hh	/^      size_t               skip, limit;$/;"	m	class:ALE::ISieveVisitor::PointRetriever
limitPoint	include/sieve/Mesh.hh	/^      const point_type  limitPoint;$/;"	m	class:ALE::IBundle::DepthVisitor
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linear_its	include/petsc-private/snesimpl.h	/^  PetscInt    linear_its;         \/* total number of linear solver iterations *\/$/;"	m	struct:_p_SNES
linear_x	src/dm/impls/plex/examples/tests/ex3.c	/^void linear_x(const PetscReal coords[], PetscScalar *u)$/;"	f
linear_y	src/dm/impls/plex/examples/tests/ex3.c	/^void linear_y(const PetscReal coords[], PetscScalar *u)$/;"	f
linear_z	src/dm/impls/plex/examples/tests/ex3.c	/^void linear_z(const PetscReal coords[], PetscScalar *u)$/;"	f
linearstability	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*linearstability)(TS,PetscReal,PetscReal,PetscReal*,PetscReal*);$/;"	m	struct:_TSOps
linegetwidth	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*linegetwidth)(PetscDraw,PetscReal*);$/;"	m	struct:_PetscDrawOps
lineno	config/BuildSystem/patch.py	/^      def lineno(self):$/;"	m	class:PatchSet.parse.wrapumerate
lineno	config/BuildSystem/patch.py	/^      lineno = fe.lineno$/;"	v	class:PatchSet.parse.wrapumerate
linesearch	include/petsc-private/snesimpl.h	/^  SNESLineSearch linesearch;     \/* line search context *\/$/;"	m	struct:_p_SNES
linesetwidth	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*linesetwidth)(PetscDraw,PetscReal);$/;"	m	struct:_PetscDrawOps
linewidth	config/BuildSystem/logger.py	/^  linewidth = property(getLinewidth, setLinewidth, doc = 'The maximum number of characters per log line')$/;"	v	class:Logger
link	config/builder.py	/^ def link(self, executable, objects, language):$/;"	m	class:PETScMaker
linkShared	config/builder.py	/^ def linkShared(self, sharedLib, libDir, tmpDir):$/;"	m	class:PETScMaker
linker	config/BuildSystem/build/templates/usingC.py	/^  linker = property(getLinker, setLinker, doc = 'The linker corresponding to the C compiler')$/;"	v	class:UsingC
linker	config/BuildSystem/build/templates/usingCxx.py	/^  linker = property(getLinker, setLinker, doc = 'The linker corresponding to the Cxx compiler')$/;"	v	class:UsingCxx
linkerFlags	config/BuildSystem/build/templates/usingC.py	/^  linkerFlags = property(getLinkerFlags, setLinkerFlags, doc = 'The flags for the C linker')$/;"	v	class:UsingC
linkerFlags	config/BuildSystem/build/templates/usingCxx.py	/^  linkerFlags = property(getLinkerFlags, setLinkerFlags, doc = 'The flags for the Cxx linker')$/;"	v	class:UsingCxx
list	include/petsc-private/bagimpl.h	/^  char          **list;$/;"	m	struct:_n_PetscBagItem
list	include/petscoptions.h	/^  const char *const *list;        \/* used for available values for PetscOptionsEList() *\/$/;"	m	struct:_n_PetscOptions
listChoices	bin/TOPSInstaller.py	/^			listChoices = ["aaa", "bbb", "ccc", "ggg", "hhh", "iii", "jjj", "kkk"$/;"	v
listChoices	bin/TOPSInstaller.py	/^			listChoices = ["nnn", "ddd", "eee", "fff", "aaa", longchoice$/;"	v
listDirs	config/BuildSystem/config/framework.py	/^  def listDirs(self, base, variable):$/;"	m	class:Framework
lj	include/petsc-private/dmdaimpl.h	/^  PetscErrorCode (*lj)(DM, Vec, Vec, void *);$/;"	m	struct:__anon23
lj	include/petsc-private/meshimpl.h	/^  DMMeshLocalJacobian1 lj;$/;"	m	struct:__anon16
load	config/BuildSystem/RDict.py	/^  def load(self):$/;"	m	class:RDict
load	config/BuildSystem/RDict.py	/^  import build.buildGraph # This is necessary for us to create BuildGraph objects on load$/;"	i
load	config/BuildSystem/RDict.py	/^  import project          # This is necessary for us to create Project objects on load$/;"	i
load	config/BuildSystem/sourceDatabase.py	/^  def load(self):$/;"	m	class:SourceDB
load	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*load)(DM,PetscViewer);$/;"	m	struct:_DMOps
load	include/petsc-private/kspimpl.h	/^  PetscErrorCode (*load)(KSP,PetscViewer);$/;"	m	struct:_KSPOps
load	include/petsc-private/matimpl.h	/^  PetscErrorCode (*load)(Mat, PetscViewer);$/;"	m	struct:_MatOps
load	include/petsc-private/pcimpl.h	/^  PetscErrorCode (*load)(PC,PetscViewer);$/;"	m	struct:_PCOps
load	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*load)(SNES,PetscViewer);$/;"	m	struct:_SNESOps
load	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*load)(TS,PetscViewer);$/;"	m	struct:_TSOps
load	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*load)(TSAdapt,PetscViewer);$/;"	m	struct:_TSAdaptOps
load	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*load)(Vec,PetscViewer);$/;"	m	struct:_VecOps
loadConfiguration	config/BuildSystem/maker.py	/^  def loadConfiguration(self, builder, name):$/;"	m	class:SIDLMake
loadConfigure	config/BuildSystem/script.py	/^  def loadConfigure(self, argDB = None):$/;"	m	class:Script
loadFramework	config/BuildSystem/config/framework.py	/^  def loadFramework(self, path):$/;"	m	class:Framework
loadLabel	include/sieve/LabelSifter.hh	/^    static void loadLabel(std::ifstream& fs, LabelSifter& label) {$/;"	f	class:ALE::LabelSifterSerializer
loadMesh	include/sieve/Mesh.hh	/^    static void loadMesh(const std::string& filename, Mesh& mesh) {$/;"	f	class:ALE::MeshSerializer
loadMesh	include/sieve/Mesh.hh	/^    static void loadMesh(std::ifstream& fs, Mesh& mesh) {$/;"	f	class:ALE::MeshSerializer
loadOverlap	include/sieve/Overlap.hh	/^  static void loadOverlap(std::ifstream& fs, Overlap& overlap) {$/;"	f	class:PETSc::OverlapSerializer
loadSection	include/sieve/IField.hh	/^    static void loadSection(std::ifstream& fs, IConstantSection<Point_, Value_>& section) {$/;"	f	class:ALE::SectionSerializer
loadSection	include/sieve/IField.hh	/^    static void loadSection(std::ifstream& fs, IGeneralSection<Point_, Value_>& section) {$/;"	f	class:ALE::SectionSerializer
loadSection	include/sieve/IField.hh	/^    static void loadSection(std::ifstream& fs, ISection<Point_, Value_>& section) {$/;"	f	class:ALE::SectionSerializer
loadSection	include/sieve/IField.hh	/^    static void loadSection(std::ifstream& fs, IUniformSection<Point_, Value_, fiberDim>& section) {$/;"	f	class:ALE::SectionSerializer
loadSieve	include/sieve/ISieve.hh	/^    static void loadSieve(const std::string& filename, ISieve& sieve) {$/;"	f	class:ALE::ISieveSerializer
loadSieve	include/sieve/ISieve.hh	/^    static void loadSieve(std::ifstream& fs, ISieve& sieve) {$/;"	f	class:ALE::ISieveSerializer
loadSifter	include/sieve/Sifter.hh	/^    static void loadSifter(std::ifstream& fs, Sifter& sifter) {$/;"	f	class:ALE::SifterSerializer
local	include/petsc-private/vecimpl.h	/^  VecScatter_Seq_General local;    \/* any part that happens to be local *\/$/;"	m	struct:__anon29
localOffsets	include/petsc-private/characteristicimpl.h	/^  PetscInt    *localOffsets;    \/* Offset into queue for each process (Prefix sums of need_count) *\/$/;"	m	struct:_p_Characteristic
localRegressionParameters	config/builder.py	/^localRegressionParameters = {}$/;"	v
localSpaceDimension	include/sieve/FEMProblem.hh	/^      virtual int localSpaceDimension() {$/;"	f	class:ALE::Problem::GenericFormSubProblem
localSpaceDimension	include/sieve/UFCProblem.hh	/^      virtual int localSpaceDimension() {$/;"	f	class:ALE::Problem::UFCFormSubProblem
local_object	bin/urlget.py	/^class local_object(url_object):$/;"	c
local_offset	include/petsc-private/isimpl.h	/^  PetscInt     local_offset;        \/* offset to the local part within the total index set *\/$/;"	m	struct:_p_IS
local_red	include/petsc-private/threadcommimpl.h	/^  void                          *local_red;     \/* Array to hold local reduction contribution from each thread *\/$/;"	m	struct:_p_PetscThreadCommRedCtx
local_remaining	include/petsc-private/matimpl.h	/^  PetscInt           local_remaining;$/;"	m	struct:_MatStashSpace
local_used	include/petsc-private/matimpl.h	/^  PetscInt           local_used;$/;"	m	struct:_MatStashSpace
localcoloring	include/petsc-private/dmdaimpl.h	/^  ISColoring            localcoloring;       \/* set by DMCreateColoring() *\/$/;"	m	struct:__anon23
localin	include/petsc-private/dmimpl.h	/^  Vec                     localin[DM_MAX_WORK_VECTORS],localout[DM_MAX_WORK_VECTORS];$/;"	m	struct:_p_DM
localitems	config/BuildSystem/RDict.py	/^  def localitems(self):$/;"	m	class:RDict
localizeLocalAdjacencyGraph	include/petscdmmesh.hh	/^PetscErrorCode localizeLocalAdjacencyGraph(const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar> >& mesh, const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar>::sieve_type>& adjGraph, const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar>::send_overlap_type>& sendOverlap, const ALE::Obj<Order>& globalOrder)$/;"	f
localizeLocalAdjacencyGraph	include/petscdmmesh.hh	/^PetscErrorCode localizeLocalAdjacencyGraph(const ALE::Obj<Mesh>& mesh, const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar>::sieve_type>& adjGraph, const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar>::send_overlap_type>& sendOverlap, const ALE::Obj<Order>& globalOrder)$/;"	f
localout	include/petsc-private/dmimpl.h	/^  Vec                     localin[DM_MAX_WORK_VECTORS],localout[DM_MAX_WORK_VECTORS];$/;"	m	struct:_p_DM
localtoglobalbegin	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*localtoglobalbegin)(DM,Vec,InsertMode,Vec);$/;"	m	struct:_DMOps
localtoglobalend	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*localtoglobalend)(DM,Vec,InsertMode,Vec);$/;"	m	struct:_DMOps
locate	config/BuildSystem/RDict.py	/^    import RDict # Need this to locate server script$/;"	i
locatePoint	include/sieve/Mesh.hh	/^    point_type locatePoint(const typename real_section_type::value_type point[], point_type guess = -1) {$/;"	f	class:ALE::IMesh
locatePoint	include/sieve/Mesh.hh	/^    point_type locatePoint(const typename real_section_type::value_type point[], point_type guess = -1) {$/;"	f	class:ALE::Mesh
locatePoint_2D	include/sieve/Mesh.hh	/^    point_type locatePoint_2D(const typename real_section_type::value_type point[]) {$/;"	f	class:ALE::Mesh
locatePoint_3D	include/sieve/Mesh.hh	/^    point_type locatePoint_3D(const typename real_section_type::value_type point[]) {$/;"	f	class:ALE::Mesh
locatePoint_General_2D	include/sieve/Mesh.hh	/^    point_type locatePoint_General_2D(const typename real_section_type::value_type p[], const point_type cell) {$/;"	f	class:ALE::IMesh
locatePoint_General_3D	include/sieve/Mesh.hh	/^    point_type locatePoint_General_3D(const typename real_section_type::value_type p[], const point_type cell) {$/;"	f	class:ALE::IMesh
locatePoint_Simplex_2D	include/sieve/Mesh.hh	/^    point_type locatePoint_Simplex_2D(const typename real_section_type::value_type point[], const point_type cell) {$/;"	f	class:ALE::IMesh
locatePoint_Simplex_3D	include/sieve/Mesh.hh	/^    point_type locatePoint_Simplex_3D(const typename real_section_type::value_type point[], const point_type cell) {$/;"	f	class:ALE::IMesh
locatepoints	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*locatepoints)(DM,Vec,IS*);$/;"	m	struct:_DMOps
location	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^Obj<topology_type::patch_label_type> location;            \/\/The triangle where the point (currently orphaned) lives$/;"	m	class:ALE::Hierarchy::HierarchyBuilder
log	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*log)(Vec);$/;"	m	struct:_VecOps
logAllocation	include/sieve/ALE_mem.hh	/^    void logAllocation(const std::string& className, int bytes) {$/;"	f	class:ALE::MemoryLogger
logAllocation	include/sieve/ALE_mem.hh	/^    void logAllocation(const std::string& stage, const std::string& className, int bytes) {$/;"	f	class:ALE::MemoryLogger
logBack	config/BuildSystem/logger.py	/^  def logBack(self):$/;"	m	class:Logger
logClear	config/BuildSystem/logger.py	/^  def logClear(self):$/;"	m	class:Logger
logClearRemoveDirectory	config/BuildSystem/logger.py	/^  def logClearRemoveDirectory(self):$/;"	m	class:Logger
logDeallocation	include/sieve/ALE_mem.hh	/^    void logDeallocation(const std::string& className, int bytes) {$/;"	f	class:ALE::MemoryLogger
logDeallocation	include/sieve/ALE_mem.hh	/^    void logDeallocation(const std::string& stage, const std::string& className, int bytes) {$/;"	f	class:ALE::MemoryLogger
logIndent	config/BuildSystem/logger.py	/^  def logIndent(self, debugLevel = -1, debugSection = None, comm = None):$/;"	m	class:Logger
logOutput	config/BuildSystem/script.py	/^    def logOutput(log, output):$/;"	f	function:Script.executeShellCommand
logPrint	config/BuildSystem/logger.py	/^  def logPrint(self, msg, debugLevel = -1, debugSection = None, indent = 1, comm = None, forceScroll = 0):$/;"	m	class:Logger
logPrintBox	config/BuildSystem/logger.py	/^  def logPrintBox(self,msg, debugLevel = -1, debugSection = 'screen', indent = 1, comm = None):$/;"	m	class:Logger
logPrintDivider	config/BuildSystem/logger.py	/^  def logPrintDivider(self, debugLevel = -1, debugSection = None, single = 0):$/;"	m	class:Logger
logResetRemoveDirectory	config/BuildSystem/logger.py	/^  def logResetRemoveDirectory(self):$/;"	m	class:Logger
logSize	include/sieve/Partitioner.hh	/^      const int  logSize;$/;"	m	class:ALE::Chaco::Partitioner
logWrite	config/BuildSystem/logger.py	/^  def logWrite(self, msg, debugLevel = -1, debugSection = None, forceScroll = 0):$/;"	m	class:Logger
logformat	config/BuildSystem/patch.py	/^  logformat = "%(message)s"$/;"	v	class:PatchSet
logged_allocator	include/sieve/ALE_mem.hh	/^    logged_allocator()                                   : polymorphic_allocator<T>()  {__log_initialize(); __alloc_initialize();};$/;"	f	class:ALE::logged_allocator
logged_allocator	include/sieve/ALE_mem.hh	/^    logged_allocator(const logged_allocator& a)          : polymorphic_allocator<T>(a) {__log_initialize(); __alloc_initialize();};$/;"	f	class:ALE::logged_allocator
logged_allocator	include/sieve/ALE_mem.hh	/^    logged_allocator(const logged_allocator<TT>& aa)    : polymorphic_allocator<T>(aa){__log_initialize(); __alloc_initialize();}$/;"	f	class:ALE::logged_allocator
logged_allocator	include/sieve/ALE_mem.hh	/^  class logged_allocator : public polymorphic_allocator<T> {$/;"	c	namespace:ALE
logger	config/BuildSystem/config/compile/processor.py	/^import logger$/;"	i
logger	config/BuildSystem/config/regression/frameworkTest.py	/^    import logger$/;"	i
logger	config/BuildSystem/help.py	/^import logger$/;"	i
logger	config/BuildSystem/patch.py	/^logger = logging.getLogger(__name__)$/;"	v
logger	config/BuildSystem/retrieval.py	/^import logger$/;"	i
logger	config/BuildSystem/script.py	/^import logger$/;"	i
logger	config/BuildSystem/sourceControl.py	/^import logger$/;"	i
logger	config/BuildSystem/sourceDatabase.py	/^import logger$/;"	i
logger	config/builder.py	/^import logger, script$/;"	i
logging	config/BuildSystem/patch.py	/^import logging$/;"	i
logging	include/finclude/petscsysdef.h	/^!     that are not used in the numerical computations, but rather in logging,$/;"	v
loghandler	config/BuildSystem/patch.py	/^  loghandler = logging.StreamHandler()$/;"	v	class:PatchSet
loglevel	config/BuildSystem/patch.py	/^  loglevel = verbosity_levels[options.verbosity]$/;"	v	class:PatchSet
longchoice	bin/TOPSInstaller.py	/^			longchoice = "This is an example of a very long option which you may or may not wish to choose."*2$/;"	v
lresid_last	include/petsc-private/snesimpl.h	/^  PetscReal lresid_last;         \/* linear residual from last iteration *\/$/;"	m	struct:__anon5
lt1	include/sieve/Mesh.hh	/^    static bool lt1(const Value& a, const Value& b) {$/;"	f	class:ALE::IBundle
ltog	include/petsc-private/dmdaimpl.h	/^  VecScatter            gtol,ltog,ltol;        \/* scatters, see below for details *\/$/;"	m	struct:__anon23
ltog_tag	src/dm/impls/moab/dmmoab.cxx	/^  moab::Tag           ltog_tag;$/;"	m	struct:__anon2	file:
ltog_tag	src/dm/impls/moab/dmmoab.cxx	/^  moab::Tag ltog_tag; \/* moab supports "global id" tags, which are usually local to global numbering *\/$/;"	m	struct:__anon1	file:
ltog_tag	src/dm/impls/moab/examples/tests/ex1.cxx	/^  moab::Tag ltog_tag;$/;"	m	class:AppCtx	file:
ltogmap	include/petsc-private/dmimpl.h	/^  ISLocalToGlobalMapping  ltogmap,ltogmapb;$/;"	m	struct:_p_DM
ltogmapb	include/petsc-private/dmimpl.h	/^  ISLocalToGlobalMapping  ltogmap,ltogmapb;$/;"	m	struct:_p_DM
ltol	include/petsc-private/dmdaimpl.h	/^  VecScatter            gtol,ltog,ltol;        \/* scatters, see below for details *\/$/;"	m	struct:__anon23
ltol	include/petsc-private/linesearchimpl.h	/^  PetscReal           ltol;$/;"	m	struct:_p_LineSearch
lua_VecCreate	interfaces/lua/src/luasrc.c	/^int lua_VecCreate(lua_State *L)$/;"	f
lua_VecSetSize	interfaces/lua/src/luasrc.c	/^int lua_VecSetSize(lua_State *L)$/;"	f
luaopen_libpetsc	interfaces/lua/src/luasrc.c	/^int luaopen_libpetsc(lua_State *L)$/;"	f
lufactor	include/petsc-private/matimpl.h	/^  PetscErrorCode (*lufactor)(Mat,IS,IS,const MatFactorInfo*);$/;"	m	struct:_MatOps
lufactornumeric	include/petsc-private/matimpl.h	/^  PetscErrorCode (*lufactornumeric)(Mat,Mat,const MatFactorInfo*);$/;"	m	struct:_MatOps
lufactorsymbolic	include/petsc-private/matimpl.h	/^  PetscErrorCode (*lufactorsymbolic)(Mat,Mat,IS,IS,const MatFactorInfo*);$/;"	m	struct:_MatOps
lx	include/petsc-private/dmdaimpl.h	/^  PetscInt              *lx,*ly,*lz;        \/* number of nodes in each partition block along 3 axis *\/$/;"	m	struct:__anon23
ly	include/petsc-private/dmdaimpl.h	/^  PetscInt              *lx,*ly,*lz;        \/* number of nodes in each partition block along 3 axis *\/$/;"	m	struct:__anon23
lz	include/petsc-private/dmdaimpl.h	/^  PetscInt              *lx,*ly,*lz;        \/* number of nodes in each partition block along 3 axis *\/$/;"	m	struct:__anon23
m	bin/pythonscripts/PetscStaticFunctionCandidates.py	/^      m = re.match(' void\\s*([^\\s]*)\\(', line)$/;"	v
m	bin/pythonscripts/PetscStaticFunctionCandidates.py	/^    m = re.match('^PetscErrorCode\\s*([^\\s]*)\\(', line)$/;"	v
m	include/petsc-private/dmdaimpl.h	/^  PetscInt              m,n,p;                 \/* processor layout *\/$/;"	m	struct:__anon23
m	include/petsc-private/matimpl.h	/^  PetscInt       M,N,m;            \/* total rows, columns; local rows *\/$/;"	m	struct:_p_MatFDColoring
m	include/petsc-private/matimpl.h	/^  PetscInt       M,N,m;            \/* total rows, columns; local rows *\/$/;"	m	struct:_p_MatTransposeColoring
m	include/petsc-private/meshimpl.h	/^  ALE::Obj<ALE::CartesianMesh> m;$/;"	m	struct:__anon17
m	include/petsc-private/meshimpl.h	/^  ALE::Obj<PETSC_MESH_TYPE> m;$/;"	m	struct:__anon16
macroToShell	config/BuildSystem/config/autoconf.py	/^  def macroToShell(self, macro):$/;"	m	class:Configure
main	bin/adiforfix.py	/^def main():$/;"	f
main	bin/taucc.py	/^def main():$/;"	f
main	bin/urlget.py	/^def main():$/;"	f
main	config/BuildSystem/build/framework.py	/^  def main(self, target = None):$/;"	m	class:Framework
main	config/builder.py	/^   from generateetags import main$/;"	i
main	config/builder.py	/^   from generatefortranstubs import main, processf90interfaces$/;"	i
main	config/cmakeboot.py	/^def main(petscdir, petscarch, argDB=None, framework=None, log=StdoutLogger(), args=[]):$/;"	f
main	config/cmakegen.py	/^def main(petscdir, log=StdoutLogger()):$/;"	f
main	src/dm/dt/examples/tests/ex1.c	/^int main(int argc,char **argv)$/;"	f
main	src/dm/dt/examples/tests/ex2.c	/^int main(int argc,char **argv)$/;"	f
main	src/dm/impls/mesh/examples/tests/TestMeshExodus.c	/^int main (int argc,char ** argv)$/;"	f
main	src/dm/impls/mesh/examples/tests/args0.cxx	/^int main(int argc, char** argv){$/;"	f
main	src/dm/impls/mesh/examples/tests/closure1.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/conversion1.cxx	/^int main(int argc, char **argv) {$/;"	f
main	src/dm/impls/mesh/examples/tests/discretization1.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/ex00.c	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/ex01.c	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/ex02.c	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/ex03.c	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/ex04.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/ex05.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/ex06.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/ex07.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/ex08.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/ex1.c	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/ex10.c	/^int main(int argc,char ** argv)$/;"	f
main	src/dm/impls/mesh/examples/tests/ex2.c	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/ex3.c	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/ex4.c	/^int main(int argc,char ** argv)$/;"	f
main	src/dm/impls/mesh/examples/tests/ex6.c	/^int main(int argc,char ** argv)$/;"	f
main	src/dm/impls/mesh/examples/tests/ex8.c	/^int main(int argc,char ** argv)$/;"	f
main	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/mesh1.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/mesh2.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/meshing.cxx	/^int main(int argc, char * argv[]) {$/;"	f
main	src/dm/impls/mesh/examples/tests/operator1.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/overlap1.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/overlap2.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/refinementTest.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/section1-old.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/section2.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/sieve2-old.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/sieveTests.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/subset.cxx	/^int main(int argc, char *argv[]) {$/;"	f
main	src/dm/impls/mesh/examples/tests/topology1.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/unitTests.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/xsieve0.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/xsieve1.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/xsieve2.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/xsieve3.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tests/xsieve4.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tutorials/ex1.c	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tutorials/ex4f90.F	/^      program main$/;"	p
main	src/dm/impls/mesh/examples/tutorials/ex_coarsen.c	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tutorials/ex_coarsen_2.c	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tutorials/ex_coarsen_3.c	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tutorials/ex_interpolate_1.c	/^int main(int argc, char * argv[])$/;"	f
main	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^int main(int argc, char *argv[])$/;"	f
main	src/dm/impls/mesh/examples/tutorials/mesh_surgery.cxx	/^int main (int argc, char * argv[]) {$/;"	f
main	src/dm/impls/moab/examples/tests/ex1.cxx	/^int main(int argc, char **argv)$/;"	f
main	src/dm/impls/plex/examples/tests/ex1.c	/^int main(int argc, char **argv)$/;"	f
main	src/dm/impls/plex/examples/tests/ex1f90.F	/^      program main$/;"	p
main	src/dm/impls/plex/examples/tests/ex2f90.F	/^      program main$/;"	p
main	src/dm/impls/plex/examples/tests/ex3.c	/^int main(int argc, char **argv)$/;"	f
main	src/dm/impls/plex/examples/tests/ex4.c	/^int main(int argc, char **argv)$/;"	f
main	src/dm/impls/plex/examples/tests/ex5.c	/^int main(int argc, char **argv)$/;"	f
main	src/dm/impls/plex/examples/tests/ex6.c	/^int main(int argc, char **argv)$/;"	f
main	src/dm/impls/plex/examples/tests/ex7.c	/^int main(int argc, char **argv)$/;"	f
main	src/dm/impls/plex/examples/tests/ex8.c	/^int main(int argc, char **argv)$/;"	f
mainBuild	config/BuildSystem/build/framework.py	/^  def mainBuild(self, target = None):$/;"	m	class:Framework
make	config/BuildSystem/maker.py	/^        import make$/;"	i
makeSourceDBPathsAbsolute	config/BuildSystem/build/framework.py	/^  def makeSourceDBPathsAbsolute(self, sourceDB):$/;"	m	class:Framework
makeSourceDBPathsRelative	config/BuildSystem/build/framework.py	/^  def makeSourceDBPathsRelative(self, sourceDB):$/;"	m	class:Framework
make_coarsest_boundary	src/dm/impls/mesh/examples/tutorials/id_bound.h	/^PetscErrorCode make_coarsest_boundary(Obj<ALE::Mesh>& mesh, int dim, ALE::Mesh::real_section_type::patch_type patch)$/;"	f	namespace:ALE::Coarsener
maker	config/BuildSystem/make.py	/^import maker$/;"	i
malloc_allocator	include/sieve/ALE_mem.hh	/^    malloc_allocator() : numAllocs(0) {className = ALE::MemoryLogger::getClassName<T>();sz = sizeof(value_type);}$/;"	f	class:ALE::malloc_allocator
malloc_allocator	include/sieve/ALE_mem.hh	/^    malloc_allocator() : numAllocs(0) {sz = sizeof(value_type);}$/;"	f	class:ALE::malloc_allocator
malloc_allocator	include/sieve/ALE_mem.hh	/^    malloc_allocator(const malloc_allocator&) : numAllocs(0) {className = ALE::MemoryLogger::getClassName<T>();sz = sizeof(value_type);}$/;"	f	class:ALE::malloc_allocator
malloc_allocator	include/sieve/ALE_mem.hh	/^    malloc_allocator(const malloc_allocator&) : numAllocs(0) {sz = sizeof(value_type);}$/;"	f	class:ALE::malloc_allocator
malloc_allocator	include/sieve/ALE_mem.hh	/^    malloc_allocator(const malloc_allocator<U>&) : numAllocs(0) {className = ALE::MemoryLogger::getClassName<T>();sz = sizeof(value_type);}$/;"	f	class:ALE::malloc_allocator
malloc_allocator	include/sieve/ALE_mem.hh	/^    malloc_allocator(const malloc_allocator<U>&) : numAllocs(0) {sz = sizeof(value_type);}$/;"	f	class:ALE::malloc_allocator
malloc_allocator	include/sieve/ALE_mem.hh	/^  class malloc_allocator$/;"	c	namespace:ALE
malloc_allocator	include/sieve/ALE_mem.hh	/^  template<> class malloc_allocator<void>$/;"	c	namespace:ALE
mallocs	include/petscmat.h	/^  PetscLogDouble mallocs;                            \/* number of mallocs during MatSetValues() *\/$/;"	m	struct:__anon93
man	include/petscoptions.h	/^  char              *man;$/;"	m	struct:_n_PetscOptions
manager	include/sieve/Partitioner.hh	/^      Manager& manager;$/;"	m	class:ALE::Partitioner::MeetVisitor
mangleFortranFunction	config/BuildSystem/config/compilers.py	/^  def mangleFortranFunction(self, name):$/;"	m	class:Configure
mansec	include/petsc-private/petscimpl.h	/^  char                 *mansec;$/;"	m	struct:_p_PetscObject
map	include/petsc-private/dmimpl.h	/^  PetscLayout             map;$/;"	m	struct:_p_DM
map	include/petsc-private/vecimpl.h	/^  PetscLayout            map;$/;"	m	struct:_p_Vec
mapToRealSpace	config/PETSc/FEM.py	/^  def mapToRealSpace(self, dim, decls, stmts, refVar = None, realVar = None, isBd = False):$/;"	m	class:QuadratureGenerator
mapping	include/petscis.h	/^  ISLocalToGlobalMapping mapping;     \/* mapping used in Vec\/MatSetValuesLocal() *\/$/;"	m	struct:_n_PetscLayout
markBoundaryCells	include/sieve/Mesh.hh	/^    void markBoundaryCells(const std::string& name, const int marker = 1, const int newMarker = 2, const bool onlyVertices = false) {$/;"	f	class:ALE::IMesh
markBoundaryCells	include/sieve/Mesh.hh	/^    void markBoundaryCells(const std::string& name, const int marker = 1, const int newMarker = 2, const bool onlyVertices = false) {$/;"	f	class:ALE::Mesh
marker	config/builder.py	/^  def marker(dep):$/;"	m	class:SourceDatabase
marker	config/builder.py	/^  def marker(dep):$/;"	m	class:SourceDatabaseDict
marker	include/sieve/ISieve.hh	/^      int    marker;$/;"	m	class:ALE::ISieveVisitor::MarkVisitor
marker	include/sieve/Sieve.hh	/^         virtual const int& marker()  const {return this->_itor->marker;};$/;"	f	class:ALE::SieveDef::RecContainerTraits::TwoValueSequence::iterator
marker	include/sieve/Sieve.hh	/^         virtual const int& marker()  const {return this->_itor->marker;};$/;"	f	class:ALE::SieveDef::RecContainerTraits::ValueSequence::iterator
marker	include/sieve/Sieve.hh	/^         virtual const int& marker() const {return this->_itor->marker;};$/;"	f	class:ALE::SieveDef::RecContainerTraits::PointSequence::iterator
marker	include/sieve/Sieve.hh	/^      marker_type marker;$/;"	m	struct:ALE::SieveDef::Rec
markerSequence	include/sieve/Sieve.hh	/^        typedef typename cap_container_type::traits::template ValueSequence<typename cap_container_type::traits::markerTag,marker_type> markerSequence;$/;"	t	struct:ALE::Sieve::__anon9
markerSet	include/sieve/Sieve.hh	/^      typedef std::set<marker_type>   markerSet;$/;"	t	class:ALE::Sieve
markerTag	include/sieve/Sieve.hh	/^      struct markerTag{};$/;"	s	struct:ALE::SieveDef::RecContainerTraits
marker_type	include/sieve/Sections.hh	/^      typedef Marker_                            marker_type;$/;"	t	class:ALE::New::PartitionSection
marker_type	include/sieve/Sections.hh	/^      typedef Marker_                          marker_type;$/;"	t	class:ALE::New::PartitionSizeSection
marker_type	include/sieve/Sieve.hh	/^      typedef Marker_ marker_type;$/;"	t	class:ALE::Sieve
marker_type	include/sieve/Sieve.hh	/^      typedef Marker_ marker_type;$/;"	t	struct:ALE::SieveDef::Rec
marker_type	include/sieve/Sieve.hh	/^      typedef typename rec_type::marker_type marker_type;$/;"	t	struct:ALE::SieveDef::RecContainerTraits
markers	include/sieve/Sieve.hh	/^      Obj<markerSet> markers() {return this->_markers;};$/;"	f	class:ALE::Sieve
mat	include/petsc-private/kspimpl.h	/^typedef struct {PetscInt model,curl,maxl;Mat mat; KSP ksp;}* KSPGuessFischer;$/;"	m	struct:__anon18
mat	include/petsc-private/pcimpl.h	/^  Mat            mat,pmat;$/;"	m	struct:_p_PC
mat	include/petscksp.h	/^typedef struct _p_KSPFischerGuess {PetscInt method,curl,maxl,refcnt;PetscBool  monitor;Mat mat; KSP ksp;}* KSPFischerGuess;$/;"	m	struct:_p_KSPFischerGuess
mat	include/petscmat.h	/^  Mat          mat;  \/* cache a Mat for communication data *\/$/;"	m	struct:_PetscCoarsenData
matchExcludeDir	config/BuildSystem/config/package.py	/^  def matchExcludeDir(self,dir):$/;"	m	class:Package
matched	config/BuildSystem/patch.py	/^      matched = False$/;"	v	class:PatchSet._match_file_hunks.NoMatch
matmatmult	include/petsc-private/matimpl.h	/^  PetscErrorCode (*matmatmult)(Mat,Mat,Mat,MatReuse,PetscReal,Mat*);$/;"	m	struct:_MatOps
matmatmultnumeric	include/petsc-private/matimpl.h	/^  PetscErrorCode (*matmatmultnumeric)(Mat,Mat,Mat,Mat);$/;"	m	struct:_MatOps
matmatmultsymbolic	include/petsc-private/matimpl.h	/^  PetscErrorCode (*matmatmultsymbolic)(Mat,Mat,Mat,PetscReal,Mat*);$/;"	m	struct:_MatOps
matmult	include/petsc-private/matimpl.h	/^  PetscErrorCode (*matmult)(Mat,Mat,MatReuse,PetscReal,Mat*);$/;"	m	struct:_MatOps
matmultnumeric	include/petsc-private/matimpl.h	/^  PetscErrorCode (*matmultnumeric)(Mat,Mat,Mat);$/;"	m	struct:_MatOps
matmultsymbolic	include/petsc-private/matimpl.h	/^  PetscErrorCode (*matmultsymbolic)(Mat,Mat,PetscReal,Mat*);$/;"	m	struct:_MatOps
matrix_section_type	src/dm/impls/mesh/examples/tests/operator1.cxx	/^typedef ALE::UniformSection<arrow_type, double>                         matrix_section_type;$/;"	t	file:
matsolve	include/petsc-private/matimpl.h	/^  PetscErrorCode (*matsolve)(Mat,Mat,Mat);$/;"	m	struct:_MatOps
matstruct	include/petsc-private/snesimpl.h	/^  MatStructure matstruct;        \/* Used by Picard solver *\/$/;"	m	struct:_p_SNES
mattransposemult	include/petsc-private/matimpl.h	/^  PetscErrorCode (*mattransposemult)(Mat,Mat,MatReuse,PetscReal,Mat*);$/;"	m	struct:_MatOps
mattransposemultnumeric	include/petsc-private/matimpl.h	/^  PetscErrorCode (*mattransposemultnumeric)(Mat,Mat,Mat);$/;"	m	struct:_MatOps
mattransposemultsymbolic	include/petsc-private/matimpl.h	/^  PetscErrorCode (*mattransposemultsymbolic)(Mat,Mat,PetscReal,Mat*);$/;"	m	struct:_MatOps
mattype	include/petsc-private/dmimpl.h	/^  MatType                 mattype;  \/* type of matrix created with DMCreateMatrix() *\/$/;"	m	struct:_p_DM
max	include/petsc-private/isimpl.h	/^  PetscInt     max,min;         \/* range of possible values *\/$/;"	m	struct:_p_IS
max	include/petsc-private/logimpl.h	/^  int  max;   \/* The maximum stack size *\/$/;"	m	struct:_n_PetscIntStack
max	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*max)(Vec,PetscInt*,PetscReal*);      \/* z = max(x); idx=index of max(x) *\/$/;"	m	struct:_VecOps
max	include/sieve/ISieve.hh	/^    point_type max() const {return this->_max;};$/;"	f	class:ALE::Interval
maxAngle	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^  double * maxAngle; \/\/the maximum angle in each level$/;"	m	struct:ALE::Coarsener::coarsen_Stats
maxClasses	include/petsclog.h	/^  int                maxClasses; \/* The maximum number of classes *\/$/;"	m	struct:_n_PetscClassPerfLog
maxClasses	include/petsclog.h	/^  int               maxClasses; \/* The maximum number of classes *\/$/;"	m	struct:_n_PetscClassRegLog
maxConeSize	include/petsc-private/dmpleximpl.h	/^  PetscInt             maxConeSize;       \/* Cached for fast lookup *\/$/;"	m	struct:__anon30
maxConeSize	include/petsc-private/meshimpl.h	/^  PetscInt             maxConeSize;    \/* Cached for fast lookup *\/$/;"	m	struct:__anon16
maxConeSize	include/sieve/ISieve.hh	/^    index_type           maxConeSize;$/;"	m	class:ALE::IFSieve
maxDepth	include/sieve/Mesh.hh	/^      int               maxDepth;$/;"	m	class:ALE::IBundle::DepthVisitor
maxDepth	include/sieve/Sieve.hh	/^      int  maxDepth, maxHeight, graphDiameter;$/;"	m	class:ALE::Sieve
maxDof	include/petsc-private/isimpl.h	/^  PetscInt                      maxDof;       \/* Maximum dof on any point *\/$/;"	m	struct:_p_PetscSection
maxEvents	include/petsclog.h	/^  int                maxEvents;  \/* The maximum number of events *\/$/;"	m	struct:_n_PetscEventPerfLog
maxEvents	include/petsclog.h	/^  int               maxEvents;  \/* The maximum number of events *\/$/;"	m	struct:_n_PetscEventRegLog
maxFailures	include/petsc-private/snesimpl.h	/^  PetscInt    maxFailures;        \/* maximum number of unsuccessful step attempts *\/$/;"	m	struct:_p_SNES
maxHeight	include/sieve/Mesh.hh	/^      int               maxHeight;$/;"	m	class:ALE::IBundle::HeightVisitor
maxHeight	include/sieve/Sieve.hh	/^      int  maxDepth, maxHeight, graphDiameter;$/;"	m	class:ALE::Sieve
maxLinearSolveFailures	include/petsc-private/snesimpl.h	/^  PetscInt    maxLinearSolveFailures;$/;"	m	struct:_p_SNES
maxStages	include/petsclog.h	/^  int              maxStages;   \/* The maximum number of stages *\/$/;"	m	struct:_n_PetscStageLog
maxSupportSize	include/petsc-private/dmpleximpl.h	/^  PetscInt             maxSupportSize;    \/* Cached for fast lookup *\/$/;"	m	struct:__anon30
maxSupportSize	include/petsc-private/meshimpl.h	/^  PetscInt             maxSupportSize; \/* Cached for fast lookup *\/$/;"	m	struct:__anon16
maxSupportSize	include/sieve/ISieve.hh	/^    index_type           maxSupportSize;$/;"	m	class:ALE::IFSieve
max_funcs	include/petsc-private/snesimpl.h	/^  PetscInt    max_funcs;          \/* max number of function evals *\/$/;"	m	struct:_p_SNES
max_it	include/petsc-private/kspimpl.h	/^  PetscInt        max_it;                     \/* maximum number of iterations *\/$/;"	m	struct:_p_KSP
max_its	include/petsc-private/linesearchimpl.h	/^  PetscInt            max_its;$/;"	m	struct:_p_LineSearch
max_its	include/petsc-private/snesimpl.h	/^  PetscInt    max_its;            \/* max number of iterations *\/$/;"	m	struct:_p_SNES
max_label_type	include/sieve/Topology.hh	/^    typedef typename std::map<patch_type, int, std::less<patch_type>, pair3_alloc_type>                       max_label_type;$/;"	t	class:ALE::Topology
max_reject	include/petsc-private/tsimpl.h	/^  PetscInt reject,max_reject;$/;"	m	struct:_p_TS
max_size	include/sieve/ALE_mem.hh	/^    size_type     max_size() const                     { return (size_type)floor(universal_allocator::max_size()\/sz); };$/;"	f	class:ALE::polymorphic_allocator
max_size	include/sieve/ALE_mem.hh	/^    size_type max_size() const {return static_cast<size_type>(-1) \/ sizeof(T);}$/;"	f	class:ALE::malloc_allocator
max_size	src/dm/impls/mesh/ALE.cxx	/^  universal_allocator::size_type universal_allocator::max_size() {$/;"	f	class:ALE::universal_allocator
max_snes_failures	include/petsc-private/tsimpl.h	/^  PetscInt max_snes_failures;$/;"	m	struct:_p_TS
max_steps	include/petsc-private/tsimpl.h	/^  PetscInt  max_steps;              \/* max number of steps *\/$/;"	m	struct:_p_TS
max_time	include/petsc-private/tsimpl.h	/^  PetscReal max_time;               \/* max time allowed *\/$/;"	m	struct:_p_TS
maxkey	include/petscctable.h	/^  PetscInt maxkey;   \/* largest key allowed *\/$/;"	m	struct:_n_PetscTable
maxl	include/petsc-private/kspimpl.h	/^typedef struct {PetscInt model,curl,maxl;Mat mat; KSP ksp;}* KSPGuessFischer;$/;"	m	struct:__anon18
maxl	include/petscksp.h	/^typedef struct _p_KSPFischerGuess {PetscInt method,curl,maxl,refcnt;PetscBool  monitor;Mat mat; KSP ksp;}* KSPFischerGuess;$/;"	m	struct:_p_KSPFischerGuess
maxleaf	include/petsc-private/sfimpl.h	/^  PetscInt        minleaf,maxleaf;$/;"	m	struct:_p_PetscSF
maxmem	include/petsc-private/logimpl.h	/^  PetscLogDouble maxmem;        \/* The maximum memory usage *\/$/;"	m	struct:_Action
maxpointwisedivide	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*maxpointwisedivide)(Vec,Vec,PetscReal*);      \/* m = max abs(x .\/ y) *\/$/;"	m	struct:_VecOps
maxpy	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*maxpy)(Vec,PetscInt,const PetscScalar*,Vec*); \/* y = y + alpha[j] x[j] *\/$/;"	m	struct:_VecOps
maxstep	include/petsc-private/linesearchimpl.h	/^  PetscReal           maxstep;$/;"	m	struct:_p_LineSearch
mbiface	src/dm/impls/moab/dmmoab.cxx	/^  moab::Interface    *mbiface;$/;"	m	struct:__anon2	file:
mbiface	src/dm/impls/moab/dmmoab.cxx	/^  moab::Interface *mbiface;$/;"	m	struct:__anon1	file:
mdmeshgetcellsectionint_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  mdmeshgetcellsectionint_(DM *mesh, CHAR name PETSC_MIXED_LEN(lenN), PetscInt *fiberDim, SectionInt *section, int *ierr PETSC_END_LEN(lenN))$/;"	f
mdot	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*mdot)(Vec,PetscInt,const Vec[],PetscScalar*); \/* z[j] = x dot y[j] *\/$/;"	m	struct:_VecOps
mdot_local	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*mdot_local)(Vec,PetscInt,const Vec[],PetscScalar*);$/;"	m	struct:_VecOps
meet	include/sieve/ALE_containers.hh	/^    inline void meet(Obj<set> s) {\/\/ this should be called 'intersect' (the verb)$/;"	f	class:ALE::set
meet	include/sieve/ISieve.hh	/^    void meet(const point_type& p, const point_type& q, Visitor& v) const {$/;"	f	class:ALE::IFSieve
meet	include/sieve/Sieve.hh	/^    const Obj<typename Sieve<Point_,Marker_,Color_>::coneSet>& Sieve<Point_,Marker_,Color_>::meet(const Obj<InputSequence>& chain0, const Obj<InputSequence>& chain1) {$/;"	f	class:ALE::Sieve
meet	include/sieve/Sieve.hh	/^    const Obj<typename Sieve<Point_,Marker_,Color_>::coneSet>& Sieve<Point_,Marker_,Color_>::meet(const Obj<InputSequence>& chain0, const Obj<InputSequence>& chain1, const Color_& color) {$/;"	f	class:ALE::Sieve
meet	include/sieve/Sieve.hh	/^    const Obj<typename Sieve<Point_,Marker_,Color_>::coneSet>& Sieve<Point_,Marker_,Color_>::meet(const Point_& p, const Point_& q) {$/;"	f	class:ALE::Sieve
meet	include/sieve/Sieve.hh	/^    const Obj<typename Sieve<Point_,Marker_,Color_>::coneSet>& Sieve<Point_,Marker_,Color_>::meet(const Point_& p, const Point_& q, const Color_& color) {$/;"	f	class:ALE::Sieve
meetTmpA	include/petsc-private/meshimpl.h	/^  PetscInt            *meetTmpA,    *meetTmpB;    \/* Work space for meet operation *\/$/;"	m	struct:__anon16
meetTmpB	include/petsc-private/meshimpl.h	/^  PetscInt            *meetTmpA,    *meetTmpB;    \/* Work space for meet operation *\/$/;"	m	struct:__anon16
mem	include/petsc-private/dmimpl.h	/^  void       *mem;$/;"	m	struct:_DMWorkLink
mem	include/petsc-private/logimpl.h	/^  PetscLogDouble mem;           \/* The current memory usage *\/$/;"	m	struct:_Action
mem	include/petsc-private/logimpl.h	/^  PetscLogDouble mem;      \/* The memory associated with the object *\/$/;"	m	struct:_Object
mem	include/petsc-private/petscimpl.h	/^  PetscLogDouble       flops,time,mem;$/;"	m	struct:_p_PetscObject
mem	include/petsclog.h	/^  PetscLogDouble mem;          \/* The total memory allocated by objects of this class *\/$/;"	m	struct:__anon63
memory	include/petscmat.h	/^  PetscLogDouble memory;                             \/* memory allocated *\/$/;"	m	struct:__anon93
memory	src/dm/impls/mesh/examples/tests/unitTests.cxx	/^  PetscBool  memory;        \/\/ Run the memory tests$/;"	m	struct:__anon23	file:
memory_attach	include/web/AMS.py	/^    def memory_attach(self,memory,func = null):$/;"	m	class:AMS_Comm
mergePair	include/sieve/ParallelMapping.hh	/^    struct mergePair: public std::binary_function<std::pair<T,T>, std::pair<T,T>, bool> {$/;"	s	class:ALE::OverlapBuilder
mesh	include/petscdmmesh_formats.hh	/^      const Obj<PETSC_MESH_TYPE>& mesh;$/;"	m	class:ALE::Dolfin::XMLMesh
mesh	include/sieve/ISieve.hh	/^      const Mesh& mesh;$/;"	m	class:ALE::ISieveVisitor::MeshNConeRetriever
mesh	include/sieve/Partitioner.hh	/^      const Obj<Mesh>& mesh;$/;"	m	class:ALE::Partitioner::MeshManager
mesh	include/sieve/Selection.hh	/^      const Obj<mesh_type>  mesh;$/;"	m	class:ALE::Selection::FaceInserter
mesh	include/sieve/Selection.hh	/^      const Obj<mesh_type>&  mesh;$/;"	m	class:ALE::Selection::FaceInserterV
mesh	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^  PetscBool  mesh;        \/\/ Run the Mesh tests$/;"	m	struct:__anon5	file:
mesh	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^Obj<ALE::Mesh>                       mesh;$/;"	m	class:ALE::Hierarchy::HierarchyBuilder
mesh	src/dm/impls/mesh/examples/tutorials/ex4f90.F	/^      type(DM)  mesh$/;"	v	program:main
mesh_topology_type	include/sieve/SectionCompletion.hh	/^      typedef Topology_                                                                        mesh_topology_type;$/;"	t	class:ALE::New::SectionCompletion
mesh_type	include/sieve/Selection.hh	/^    typedef Mesh_                                mesh_type;$/;"	t	class:ALE::Selection
mesh_type	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^  typedef ALE::Mesh                    mesh_type;$/;"	t	class:FunctionTestDistribution	file:
mesh_type	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  typedef ALE::IMesh<>                 mesh_type;$/;"	t	class:FunctionTestIDistribution	file:
mesh_type	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  typedef ALE::IMesh<>          mesh_type;$/;"	t	class:FunctionTestIMesh	file:
mesh_type	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  typedef ALE::IMesh<>          mesh_type;$/;"	t	class:MemoryTestIMesh	file:
mesh_type	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  typedef ALE::IMesh<>          mesh_type;$/;"	t	class:StressTestIMesh	file:
mesh_type	src/dm/impls/mesh/examples/tests/section1.cxx	/^typedef ALE::Mesh                    mesh_type;$/;"	t	file:
mesh_type	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^typedef ALE::Mesh                        mesh_type;$/;"	t	file:
message	bin/TOPSInstaller.py	/^			message = "Here is some sample code. " * 16$/;"	v
message	bin/TOPSInstaller.py	/^			message = "Here is some sample text. " * 16$/;"	v
message	bin/TOPSInstaller.py	/^			message = "Pick as many choices as you wish."$/;"	v
message	bin/TOPSInstaller.py	/^			message = "Pick something. " + ("A wrapable sentence of text ?! "*30) + "\\nA separate line of text."*6$/;"	v
message	bin/TOPSInstaller.py	/^			message = "Pick something. "$/;"	v
message	include/petscsys.hh	/^    const char *message()   const {return this->_txt.str().c_str();}$/;"	f	class:PETSc::Exception
message	include/sieve/ALE_exception.hh	/^    const char   *message() const  {return this->what();};$/;"	f	class:ALE::Exception
message	include/sieve/ALE_exception.hh	/^    const char   *message() const {return this->_txt.str().c_str();};$/;"	f	class:ALE::XException
messageLength	include/petsclog.h	/^  PetscLogDouble messageLength; \/* The total message lengths in this event *\/$/;"	m	struct:__anon65
method	include/petscksp.h	/^typedef struct _p_KSPFischerGuess {PetscInt method,curl,maxl,refcnt;PetscBool  monitor;Mat mat; KSP ksp;}* KSPFischerGuess;$/;"	m	struct:_p_KSPFischerGuess
mf	include/petsc-private/snesimpl.h	/^  PetscBool   mf;               \/* -snes_mf was used on this snes *\/$/;"	m	struct:_p_SNES
mf_operator	include/petsc-private/snesimpl.h	/^  PetscBool   mf_operator;      \/* -snes_mf_operator was used on this snes *\/$/;"	m	struct:_p_SNES
mf_version	include/petsc-private/snesimpl.h	/^  PetscInt    mf_version;       \/* The version of snes_mf used *\/$/;"	m	struct:_p_SNES
min	include/petsc-private/isimpl.h	/^  PetscInt     max,min;         \/* range of possible values *\/$/;"	m	struct:_p_IS
min	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*min)(Vec,PetscInt*,PetscReal*);      \/* z = min(x); idx=index of min(x) *\/$/;"	m	struct:_VecOps
min	include/sieve/ISieve.hh	/^    point_type min() const {return this->_min;};$/;"	f	class:ALE::Interval
minAngle	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^  double * minAngle; \/\/the minimum angle in each level$/;"	m	struct:ALE::Coarsener::coarsen_Stats
mine	include/petsc-private/sfimpl.h	/^  PetscInt        *mine;        \/* Location of leaves in leafdata arrays provided to the communication routines *\/$/;"	m	struct:_p_PetscSF
mine_alloc	include/petsc-private/sfimpl.h	/^  PetscInt        *mine_alloc;$/;"	m	struct:_p_PetscSF
mininitialrtol	include/petsc-private/kspimpl.h	/^  PetscBool  mininitialrtol; \/* default relative residual decrease is computing from min of initial residual and rhs *\/$/;"	m	struct:__anon21
minleaf	include/petsc-private/sfimpl.h	/^  PetscInt        minleaf,maxleaf;$/;"	m	struct:_p_PetscSF
mis	config/PETSc/FEM.py	/^    from FIAT.polynomial_set import mis$/;"	i
miscSetup	config/PETSc/packages/ccafe.py	/^  def miscSetup(self):$/;"	m	class:Configure
missingClients	config/BuildSystem/build/framework.py	/^  def missingClients(self):$/;"	m	class:Framework
missingdiagonal	include/petsc-private/matimpl.h	/^  PetscErrorCode (*missingdiagonal)(Mat,PetscBool *,PetscInt*);$/;"	m	struct:_MatOps
mkfile	config/BuildSystem/config/programs.py	/^      def mkfile(base,contents):$/;"	f	function:.configurePrograms
mname	include/petsc-private/matimpl.h	/^  char        *bname,*sname,*mname;$/;"	m	struct:_p_MatBaseName
mode	include/sieve/ISieve.hh	/^      const InsertMode   mode;$/;"	m	class:ALE::ISieveVisitor::UpdateVecVisitor
model	include/petsc-private/kspimpl.h	/^typedef struct {PetscInt model,curl,maxl;Mat mat; KSP ksp;}* KSPGuessFischer;$/;"	m	struct:__anon18
modifiedPoints	include/sieve/Mesh.hh	/^      std::set<point_type> modifiedPoints;$/;"	m	class:ALE::IBundle::DepthVisitor
modifiedPoints	include/sieve/Mesh.hh	/^      std::set<typename sieve_type::point_type> modifiedPoints;$/;"	m	class:ALE::IBundle::HeightVisitor
modifyColor	include/sieve/Sifter.hh	/^    void modifyColor(const typename traits::source_type& s, const typename traits::target_type& t, const ColorChanger& changeColor) {$/;"	f	class:ALE::Sifter
modifysubmatrices	include/petsc-private/pcimpl.h	/^  PetscErrorCode (*modifysubmatrices)(PC,PetscInt,const IS[],const IS[],Mat[],void*); \/* user provided routine *\/$/;"	m	struct:_p_PC
modifysubmatricesP	include/petsc-private/pcimpl.h	/^  void           *modifysubmatricesP; \/* context for user routine *\/$/;"	m	struct:_p_PC
module	config/BuildSystem/maker.py	/^  module = property(getMakeModule, setMakeModule, doc = 'The make module for this build')$/;"	v	class:BasicMake
monitor	include/petsc-private/kspimpl.h	/^  PetscErrorCode (*monitor[MAXKSPMONITORS])(KSP,PetscInt,PetscReal,void*); \/* returns control to user after *\/$/;"	m	struct:_p_KSP
monitor	include/petsc-private/linesearchimpl.h	/^  PetscViewer         monitor;$/;"	m	struct:_p_LineSearch
monitor	include/petsc-private/snesimpl.h	/^  PetscErrorCode      (*monitor[MAXSNESMONITORS])(SNES,PetscInt,PetscReal,void*); \/* monitor routine *\/$/;"	m	struct:_p_SNES
monitor	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*monitor[MAXTSMONITORS])(TS,PetscInt,PetscReal,Vec,void*); \/* returns control to user after *\/$/;"	m	struct:_p_TS
monitor	include/petsc-private/tsimpl.h	/^  PetscViewer monitor;$/;"	m	struct:_p_TSAdapt
monitor	include/petscksp.h	/^typedef struct _p_KSPFischerGuess {PetscInt method,curl,maxl,refcnt;PetscBool  monitor;Mat mat; KSP ksp;}* KSPFischerGuess;$/;"	m	struct:_p_KSPFischerGuess
monitorcontext	include/petsc-private/kspimpl.h	/^  void *monitorcontext[MAXKSPMONITORS];                  \/* residual calculation, allows user *\/$/;"	m	struct:_p_KSP
monitorcontext	include/petsc-private/snesimpl.h	/^  void                *monitorcontext[MAXSNESMONITORS];                           \/* monitor context *\/$/;"	m	struct:_p_SNES
monitorcontext	include/petsc-private/tsimpl.h	/^  void *monitorcontext[MAXTSMONITORS];                 \/* residual calculation, allows user *\/$/;"	m	struct:_p_TS
monitordestroy	include/petsc-private/kspimpl.h	/^  PetscErrorCode (*monitordestroy[MAXKSPMONITORS])(void**);         \/* *\/$/;"	m	struct:_p_KSP
monitordestroy	include/petsc-private/snesimpl.h	/^  PetscErrorCode      (*monitordestroy[MAXSNESMONITORS])(void**);                 \/* monitor context destroy routine *\/$/;"	m	struct:_p_SNES
monitordestroy	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*monitordestroy[MAXTSMONITORS])(void**);$/;"	m	struct:_p_TS
move_configure_log	config/configure.py	/^def move_configure_log(framework):$/;"	f
move_type	include/sieve/BasicCommunication.hh	/^    typedef std::pair<num_type, const value_type*> move_type;$/;"	t	class:ALE::MPIMover
moves_type	include/sieve/BasicCommunication.hh	/^    typedef std::map<int, move_type>               moves_type;$/;"	t	class:ALE::MPIMover
mpe_id_begin	include/petsclog.h	/^  int          mpe_id_begin; \/* MPE IDs that define the event *\/$/;"	m	struct:__anon64
mpe_id_end	include/petsclog.h	/^  int          mpe_id_end;$/;"	m	struct:__anon64
mpi	config/BuildSystem/regression/testCase.py	/^  mpi = None$/;"	v	class:MPITest
msg	bin/TOPSInstaller.py	/^			msg   =  "Demo of " + reply[0]$/;"	v
msg	bin/TOPSInstaller.py	/^			msg = "This is a test of the diropenbox.\\n\\nPick the directory that you wish to open."$/;"	v
msg	include/petscsys.hh	/^    const std::string msg() const {return this->_txt.str();}$/;"	f	class:PETSc::Exception
msg	include/sieve/ALE_exception.hh	/^    const string msg()     const {return this->_txt.str();};$/;"	f	class:ALE::XException
msg	include/sieve/ALE_exception.hh	/^    string msg()     const  {return std::string(this->what());};$/;"	f	class:ALE::Exception
msgLog	include/sieve/Partitioner.hh	/^      char      *msgLog;$/;"	m	class:ALE::Chaco::Partitioner
msgbox	bin/TOPSInstaller.py	/^def msgbox(message="Shall I continue?", title="", buttonMessage="OK"):$/;"	f
msgemm_	include/petsc-private/kernels/blockinvert.h	349;"	d
msgemm_	include/petsc-private/kernels/blockinvert.h	356;"	d
msgemmi_	include/petsc-private/kernels/blockinvert.h	348;"	d
msgemmi_	include/petsc-private/kernels/blockinvert.h	355;"	d
msgemv_	include/petsc-private/kernels/blockinvert.h	344;"	d
msgemv_	include/petsc-private/kernels/blockinvert.h	351;"	d
msgemvm_	include/petsc-private/kernels/blockinvert.h	346;"	d
msgemvm_	include/petsc-private/kernels/blockinvert.h	353;"	d
msgemvp_	include/petsc-private/kernels/blockinvert.h	345;"	d
msgemvp_	include/petsc-private/kernels/blockinvert.h	352;"	d
msgemvt_	include/petsc-private/kernels/blockinvert.h	347;"	d
msgemvt_	include/petsc-private/kernels/blockinvert.h	354;"	d
msize	include/petsc-private/bagimpl.h	/^  PetscInt      msize;$/;"	m	struct:_n_PetscBagItem
mstructure	include/petsc-private/tsimpl.h	/^    MatStructure mstructure;    \/* The structure returned *\/$/;"	m	struct:_p_TS::__anon6
mstructure	include/petsc-private/tsimpl.h	/^    MatStructure mstructure;    \/* The structure returned *\/$/;"	m	struct:_p_TS::__anon7
mtdot	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*mtdot)(Vec,PetscInt,const Vec[],PetscScalar*);\/* z[j] = x dot y[j] *\/$/;"	m	struct:_VecOps
mtdot_local	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*mtdot_local)(Vec,PetscInt,const Vec[],PetscScalar*);$/;"	m	struct:_VecOps
mult	include/petsc-private/matimpl.h	/^  PetscErrorCode (*mult)(Mat,Vec,Vec);$/;"	m	struct:_MatOps
multadd	include/petsc-private/matimpl.h	/^  PetscErrorCode (*multadd)(Mat,Vec,Vec,Vec);$/;"	m	struct:_MatOps
multchoicebox	bin/TOPSInstaller.py	/^def multchoicebox(message="Pick as many items as you like.", title=""$/;"	f
multconstrained	include/petsc-private/matimpl.h	/^  PetscErrorCode (*multconstrained)(Mat,Vec,Vec);$/;"	m	struct:_MatOps
multdiagonalblock	include/petsc-private/matimpl.h	/^  PetscErrorCode (*multdiagonalblock)(Mat,Vec,Vec);$/;"	m	struct:_MatOps
multenterbox	bin/TOPSInstaller.py	/^def multenterbox(message="Fill in values for the fields."$/;"	f
multhermitiantranspose	include/petsc-private/matimpl.h	/^  PetscErrorCode (*multhermitiantranspose)(Mat,Vec,Vec);$/;"	m	struct:_MatOps
multhermitiantransposeadd	include/petsc-private/matimpl.h	/^  PetscErrorCode (*multhermitiantransposeadd)(Mat,Vec,Vec,Vec);$/;"	m	struct:_MatOps
multi	include/petsc-private/sfimpl.h	/^  PetscSF         multi;        \/* Internal graph used to implement gather and scatter operations *\/$/;"	m	struct:_p_PetscSF
multiColor	include/sieve/Sifter.hh	/^    typedef enum {multiColor, uniColor} ColorMultiplicity;$/;"	e	enum:ALE::SifterDef::__anon1
multiprocessing	config/BuildSystem/config/programs.py	/^        import multiprocessing$/;"	i
mults	include/petsc-private/matimpl.h	/^  PetscErrorCode (*mults)(Mat, Vecs, Vecs);$/;"	m	struct:_MatOps
multtranspose	include/petsc-private/matimpl.h	/^  PetscErrorCode (*multtranspose)(Mat,Vec,Vec);$/;"	m	struct:_MatOps
multtransposeadd	include/petsc-private/matimpl.h	/^  PetscErrorCode (*multtransposeadd)(Mat,Vec,Vec,Vec);$/;"	m	struct:_MatOps
multtransposeconstrained	include/petsc-private/matimpl.h	/^  PetscErrorCode (*multtransposeconstrained)(Mat,Vec,Vec);$/;"	m	struct:_MatOps
mx	include/petscdmdatypes.h	/^  PetscInt         mx,my,mz;    \/* global number of grid points in each direction *\/$/;"	m	struct:__anon5
mxArray	bin/matlab/classes/matlabheader.h	/^typedef struct mxArray_tag mxArray;$/;"	t	typeref:struct:mxArray_tag
my	include/petscdmdatypes.h	/^  PetscInt         mx,my,mz;    \/* global number of grid points in each direction *\/$/;"	m	struct:__anon5
mz	include/petscdmdatypes.h	/^  PetscInt         mx,my,mz;    \/* global number of grid points in each direction *\/$/;"	m	struct:__anon5
n	bin/TOPSInstaller.py	/^        f.write('  import configure\\n')$/;"	i
n	bin/TOPSInstaller.py	/^        f.write('  import sys\\n')$/;"	i
n	config/PETSc/Configure.py	/^    f.write('  import configure\\n')$/;"	i
n	config/PETSc/Configure.py	/^    f.write('  import os\\n')$/;"	i
n	config/PETSc/Configure.py	/^    f.write('  import sys\\n')$/;"	i
n	config/install.py	/^    f.write('import os\\n')$/;"	i
n	include/petsc-private/dmdaimpl.h	/^  PetscInt              m,n,p;                 \/* processor layout *\/$/;"	m	struct:__anon23
n	include/petsc-private/isimpl.h	/^  PetscInt n;                  \/* number of local indices *\/$/;"	m	struct:_p_ISLocalToGlobalMapping
n	include/petsc-private/matimpl.h	/^  PetscInt       n;$/;"	m	struct:_p_MatNullSpace
n	include/petsc-private/matimpl.h	/^  PetscInt      n;                      \/* stash size *\/$/;"	m	struct:__anon1
n	include/petsc-private/matimpl.h	/^  PetscInt    n;                                 \/* number of partitions *\/$/;"	m	struct:_p_MatPartitioning
n	include/petsc-private/tsimpl.h	/^    PetscInt   n;                \/* number of candidate schemes, including the one currently in use *\/$/;"	m	struct:_p_TSAdapt::__anon8
n	include/petsc-private/vecimpl.h	/^  PetscInt               n;        \/* number of processors to send\/receive *\/$/;"	m	struct:__anon29
n	include/petsc-private/vecimpl.h	/^  PetscInt       n;                    \/* number of components to scatter *\/$/;"	m	struct:__anon26
n	include/petsc-private/vecimpl.h	/^  PetscInt       n;$/;"	m	struct:__anon27
n	include/petsc-private/vecimpl.h	/^  PetscInt      n;                      \/* stash size *\/$/;"	m	struct:__anon24
n	include/petscdm.h	/^  PetscInt   n;      \/* The number of local points *\/$/;"	m	struct:_DMInterpolationInfo
n	include/petscdmmesh.h	/^  PetscInt   n;      \/* The number of local points *\/$/;"	m	struct:_DMMeshInterpolationInfo
n	include/petscis.h	/^  PetscInt               n,N;         \/* local, global vector size *\/$/;"	m	struct:_n_PetscLayout
n	include/petscis.h	/^  PetscInt        n;                \/* number of colors *\/$/;"	m	struct:_n_ISColoring
n	include/petscsys.h	/^  PetscInt   n;           \/* num of subcommunicators under the parent communicator *\/$/;"	m	struct:_n_PetscSubcomm
n	include/petscvec.h	/^        struct _n_Vecs  {PetscInt n; Vec v;};$/;"	m	struct:_n_Vecs
nCone	include/sieve/CartesianSieve.hh	/^    Obj<coneSequence> nCone(const point_type& p, const int n) {$/;"	f	class:ALE::CartesianSieve
nCone	include/sieve/Field.hh	/^    const Obj<coneSet>& nCone(const point_type& p, const int level) {$/;"	f	class:ALE::DiscreteSieve
nCone	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::coneArray> Sieve<Point_,Marker_,Color_>::nCone(const Point_& p, int n) {$/;"	f	class:ALE::Sieve
nCone	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::coneArray> Sieve<Point_,Marker_,Color_>::nCone(const Point_& p, int n, const Color_& color, bool useColor) {$/;"	f	class:ALE::Sieve
nCone	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::coneSet> Sieve<Point_,Marker_,Color_>::nCone(const Obj<InputSequence>& points, int n) {$/;"	f	class:ALE::Sieve
nCone	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::coneSet> Sieve<Point_,Marker_,Color_>::nCone(const Obj<InputSequence>& points, int n, const Color_& color, bool useColor ) {$/;"	f	class:ALE::Sieve
nCone	include/sieve/SieveAlgorithms.hh	/^    static Obj<coneArray> nCone(const Obj<bundle_type>& bundle, const point_type& p, const int n) {$/;"	f	class:ALE::SieveAlg
nF	include/sieve/ISieve.hh	/^      PetscInt            nF;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
nF	include/sieve/ISieve.hh	/^      PetscInt           nF;$/;"	m	class:ALE::ISieveVisitor::UpdateVecVisitor
nF	include/sieve/ISieve.hh	/^      int                nF;$/;"	m	class:ALE::ISieveVisitor::RestrictVecVisitor
nFaces	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^  int * nFaces; \/\/the number of faces$/;"	m	struct:ALE::Coarsener::coarsen_Stats
nInput	include/petscdm.h	/^  PetscInt   nInput; \/* The number of input points *\/$/;"	m	struct:_DMInterpolationInfo
nInput	include/petscdmmesh.h	/^  PetscInt   nInput; \/* The number of input points *\/$/;"	m	struct:_DMMeshInterpolationInfo
nJoin	include/sieve/ISieve.hh	/^    void nJoin(const SequenceIterator& pointsBegin, const SequenceIterator& pointsEnd, const int depth, Visitor& v) {$/;"	f	class:ALE::IFSieve
nJoin	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportSet> Sieve<Point_,Marker_,Color_>::nJoin(const Obj<InputSequence>& chain, const int depth) {$/;"	f	class:ALE::Sieve
nJoin	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportSet> Sieve<Point_,Marker_,Color_>::nJoin(const Obj<InputSequence>& chain0, const Obj<InputSequence>& chain1, int n) {$/;"	f	class:ALE::Sieve
nJoin	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportSet> Sieve<Point_,Marker_,Color_>::nJoin(const Obj<InputSequence>& chain0,const Obj<InputSequence>& chain1,int n,const Color_& color,bool useColor){$/;"	f	class:ALE::Sieve
nJoin	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportSet> Sieve<Point_,Marker_,Color_>::nJoin(const Point_& p, const Point_& q, int n) {$/;"	f	class:ALE::Sieve
nJoin	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportSet> Sieve<Point_,Marker_,Color_>::nJoin(const Point_& p, const Point_& q, int n, const Color_& color, bool useColor) {$/;"	f	class:ALE::Sieve
nJoin1	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportSet> Sieve<Point_,Marker_,Color_>::nJoin1(const Obj<InputSequence>& chain) {$/;"	f	class:ALE::Sieve
nMeet	include/sieve/Sieve.hh	/^    const Obj<typename Sieve<Point_,Marker_,Color_>::coneSet>& Sieve<Point_,Marker_,Color_>::nMeet(const Obj<InputSequence>& chain0, const Obj<InputSequence>& chain1, int n) {$/;"	f	class:ALE::Sieve
nMeet	include/sieve/Sieve.hh	/^    const Obj<typename Sieve<Point_,Marker_,Color_>::coneSet>& Sieve<Point_,Marker_,Color_>::nMeet(const Obj<InputSequence>& chain0, const Obj<InputSequence>& chain1,int n,const Color_& color, bool useColor){$/;"	f	class:ALE::Sieve
nMeet	include/sieve/Sieve.hh	/^    const Obj<typename Sieve<Point_,Marker_,Color_>::coneSet>& Sieve<Point_,Marker_,Color_>::nMeet(const Point_& p, const Point_& q, int n) {$/;"	f	class:ALE::Sieve
nMeet	include/sieve/Sieve.hh	/^    const Obj<typename Sieve<Point_,Marker_,Color_>::coneSet>& Sieve<Point_,Marker_,Color_>::nMeet(const Point_& p, const Point_& q, int n, const Color_& color, bool useColor ) {$/;"	f	class:ALE::Sieve
nMeshes	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^  int nMeshes; \/\/the number of meshes$/;"	m	struct:ALE::Coarsener::coarsen_Stats
nNodes	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^  int * nNodes; \/\/the number of nodes$/;"	m	struct:ALE::Coarsener::coarsen_Stats
nStar	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportSet> Sieve<Point_,Marker_,Color_>::nStar(const Obj<InputSequence>& points, int n) {$/;"	f	class:ALE::Sieve
nStar	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportSet> Sieve<Point_,Marker_,Color_>::nStar(const Obj<InputSequence>& points, int n, const Color_& color, bool useColor ) {$/;"	f	class:ALE::Sieve
nStar	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportSet> Sieve<Point_,Marker_,Color_>::nStar(const Point_& p, int n) {$/;"	f	class:ALE::Sieve
nStar	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportSet> Sieve<Point_,Marker_,Color_>::nStar(const Point_& p, int n, const Color_& color, bool useColor ) {$/;"	f	class:ALE::Sieve
nSupport	include/sieve/CartesianSieve.hh	/^    Obj<supportSequence> nSupport(const point_type& p, const int n) {$/;"	f	class:ALE::CartesianSieve
nSupport	include/sieve/Field.hh	/^    const Obj<supportSet>& nSupport(const point_type& p, const int level) {$/;"	f	class:ALE::DiscreteSieve
nSupport	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportArray> Sieve<Point_,Marker_,Color_>::nSupport(const Point_& p, int n) {$/;"	f	class:ALE::Sieve
nSupport	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportArray> Sieve<Point_,Marker_,Color_>::nSupport(const Point_& p, int n, const Color_& color, bool useColor) {$/;"	f	class:ALE::Sieve
nSupport	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportSet> Sieve<Point_,Marker_,Color_>::nSupport(const Obj<InputSequence>& points, int n) {$/;"	f	class:ALE::Sieve
nSupport	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportSet> Sieve<Point_,Marker_,Color_>::nSupport(const Obj<InputSequence>& points, int n, const Color_& color, bool useColor ) {$/;"	f	class:ALE::Sieve
nSupport	include/sieve/SieveAlgorithms.hh	/^    static Obj<supportArray> nSupport(const Obj<bundle_type>& bundle, const point_type& p, const int n) {$/;"	f	class:ALE::SieveAlg
n_nonmatching	include/petsc-private/vecimpl.h	/^  PetscInt       n_nonmatching;        \/* number of "from"s  != "to"s *\/$/;"	m	struct:__anon26
naggedtoday	bin/petscnagupgrade.py	/^def naggedtoday(file):$/;"	f
name	config/BuildSystem/config/compile/processor.py	/^  name = property(getName, setName, doc = 'The name of the processor in RDict')$/;"	v	class:Processor
name	config/BuildSystem/config/packages/PETSc.py	/^  name = property(getName, doc = 'The PETSc installation type')$/;"	v	class:Configure
name	config/PETSc/petsc.py	/^  name = property(getName, doc = 'The PETSc installation type')$/;"	v	class:Configure
name	include/petsc-private/bagimpl.h	/^  char          name[PETSC_BAG_NAME_LENGTH],help[PETSC_BAG_HELP_LENGTH];$/;"	m	struct:_n_PetscBagItem
name	include/petsc-private/dmimpl.h	/^  char *name;$/;"	m	struct:_DMNamedVecLink
name	include/petsc-private/dmpleximpl.h	/^  char     *name;           \/* Label name *\/$/;"	m	struct:_n_DMLabel
name	include/petsc-private/logimpl.h	/^  char           name[64]; \/* The object name *\/$/;"	m	struct:_Object
name	include/petsc-private/meshimpl.h	/^  char      *name;           \/* Label name *\/$/;"	m	struct:Sieve_Label
name	include/petsc-private/petscimpl.h	/^  char*                name;$/;"	m	struct:_p_PetscObject
name	include/petsc-private/tsimpl.h	/^    const char *name[16];        \/* name of the scheme *\/$/;"	m	struct:_p_TSAdapt::__anon8
name	include/petsclog.h	/^  char               *name;     \/* The stage name *\/$/;"	m	struct:_PetscStageInfo
name	include/petsclog.h	/^  char           *name;   \/* The class name *\/$/;"	m	struct:__anon62
name	include/petsclog.h	/^  char         *name;         \/* The name of this event *\/$/;"	m	struct:__anon64
name	include/petsclog.hh	/^    std::string   name;$/;"	m	class:PETSc::LogEvent
name	include/petsclog.hh	/^    std::string   name;$/;"	m	class:PETSc::LogStage
name	include/sieve/ALE_args.hh	/^    const string& name() const {return this->_name;};$/;"	f	class:ALE::ArgDB
name_type	include/sieve/FEMProblem.hh	/^      typedef std::string name_type;$/;"	t	class:ALE::Problem::GeneralIntegral
name_type	include/sieve/FEMProblem.hh	/^      typedef std::string name_type;$/;"	t	class:ALE::Problem::SubProblem
namecount	include/petsc-private/petscimpl.h	/^  PetscInt    namecount;        \/* used to generate the next name, as in Vec_0, Mat_1, ... *\/$/;"	m	struct:__anon14
namedglobal	include/petsc-private/dmimpl.h	/^  DMNamedVecLink          namedglobal;$/;"	m	struct:_p_DM
namedlocal	include/petsc-private/dmimpl.h	/^  DMNamedVecLink          namedlocal;$/;"	m	struct:_p_DM
names	include/sieve/ALE_mem.hh	/^    typedef std::deque<std::string>                     names;$/;"	t	class:ALE::MemoryLogger
names_type	include/sieve/FEMProblem.hh	/^      typedef std::set<std::string> names_type;$/;"	t	class:ALE::Problem::GeneralDiscretization
names_type	include/sieve/FEMProblem.hh	/^      typedef std::set<std::string> names_type;$/;"	t	class:ALE::Problem::GenericFormSubProblem
names_type	include/sieve/Mesh.hh	/^    typedef std::set<std::string>                     names_type;$/;"	t	class:ALE::IMesh
names_type	include/sieve/Mesh.hh	/^    typedef std::set<std::string>            names_type;$/;"	t	class:ALE::Mesh
nargs	config/BuildSystem/RDict.py	/^import nargs$/;"	i
nargs	config/BuildSystem/build/compile/SIDL.py	/^    import nargs$/;"	i
nargs	config/BuildSystem/build/framework.py	/^import nargs$/;"	i
nargs	config/BuildSystem/config/ase.py	/^    import nargs$/;"	i
nargs	config/BuildSystem/config/compilerFlags.py	/^    import nargs$/;"	i
nargs	config/BuildSystem/config/compilers.py	/^    import nargs$/;"	i
nargs	config/BuildSystem/config/framework.py	/^      import nargs$/;"	i
nargs	config/BuildSystem/config/framework.py	/^    import nargs$/;"	i
nargs	config/BuildSystem/config/functions.py	/^    import nargs$/;"	i
nargs	config/BuildSystem/config/package.py	/^    import nargs$/;"	i
nargs	config/BuildSystem/config/packages/BlasLapack.py	/^    import nargs$/;"	i
nargs	config/BuildSystem/config/packages/MPI.py	/^    import nargs$/;"	i
nargs	config/BuildSystem/config/packages/PETSc.py	/^    import nargs$/;"	i
nargs	config/BuildSystem/config/preTests.py	/^    import nargs$/;"	i
nargs	config/BuildSystem/config/programs.py	/^    import nargs$/;"	i
nargs	config/BuildSystem/config/regression/frameworkTest.py	/^import nargs$/;"	i
nargs	config/BuildSystem/config/setCompilers.py	/^    import nargs$/;"	i
nargs	config/BuildSystem/config/sourceControl.py	/^    import nargs$/;"	i
nargs	config/BuildSystem/config/types.py	/^    import nargs$/;"	i
nargs	config/BuildSystem/logger.py	/^    import nargs$/;"	i
nargs	config/BuildSystem/maker.py	/^    import nargs$/;"	i
nargs	config/BuildSystem/regression/buildtest.py	/^    import nargs$/;"	i
nargs	config/BuildSystem/script.py	/^    import nargs$/;"	i
nargs	config/BuildSystem/script.py	/^import nargs$/;"	i
nargs	config/PETSc/Configure.py	/^    import nargs$/;"	i
nargs	config/PETSc/package.py	/^import nargs$/;"	i
nargs	config/PETSc/packages/MUMPS.py	/^    import nargs$/;"	i
nargs	config/PETSc/packages/Matlab.py	/^    import nargs$/;"	i
nargs	config/PETSc/packages/Sieve.py	/^    import nargs$/;"	i
nargs	config/PETSc/packages/cmake.py	/^    import nargs$/;"	i
nargs	config/PETSc/packages/cuda.py	/^    import nargs$/;"	i
nargs	config/PETSc/packages/sowing.py	/^    import nargs$/;"	i
nargs	config/PETSc/petsc.py	/^    import nargs$/;"	i
nargs	config/PETSc/utilities/CHUD.py	/^    import nargs$/;"	i
nargs	config/PETSc/utilities/Etags.py	/^    import nargs$/;"	i
nargs	config/PETSc/utilities/FPTrap.py	/^    import nargs$/;"	i
nargs	config/PETSc/utilities/Regression.py	/^    import nargs$/;"	i
nargs	config/PETSc/utilities/arch.py	/^    import nargs$/;"	i
nargs	config/PETSc/utilities/bmakeDir.py	/^    import nargs$/;"	i
nargs	config/PETSc/utilities/cacheDetails.py	/^    import nargs$/;"	i
nargs	config/PETSc/utilities/dataFilesPath.py	/^    import nargs$/;"	i
nargs	config/PETSc/utilities/debuggers.py	/^    import nargs$/;"	i
nargs	config/PETSc/utilities/debugging.py	/^    import nargs$/;"	i
nargs	config/PETSc/utilities/fortranCPP.py	/^    import nargs$/;"	i
nargs	config/PETSc/utilities/fortranCommandLine.py	/^    import nargs$/;"	i
nargs	config/PETSc/utilities/getResidentSetSize.py	/^    import nargs$/;"	i
nargs	config/PETSc/utilities/languages.py	/^    import nargs$/;"	i
nargs	config/PETSc/utilities/libraryOptions.py	/^    import nargs$/;"	i
nargs	config/PETSc/utilities/memAlign.py	/^    import nargs$/;"	i
nargs	config/PETSc/utilities/missing.py	/^    import nargs$/;"	i
nargs	config/PETSc/utilities/petscdir.py	/^    import nargs$/;"	i
nargs	config/PETSc/utilities/scalarTypes.py	/^    import nargs$/;"	i
nargs	config/PETSc/utilities/sharedLibraries.py	/^    import nargs$/;"	i
nargs	config/PETSc/utilities/timer.py	/^    import nargs$/;"	i
nargs	config/builder.py	/^   import nargs$/;"	i
nargs	config/install.py	/^    import nargs$/;"	i
nargs	include/petsc-private/threadcommimpl.h	/^  PetscInt          nargs;                         \/* Number of arguments for the kernel *\/$/;"	m	struct:_p_PetscThreadCommJobCtx
nargs	src/dm/impls/mesh/examples/tests/memoryTests.py	/^    import nargs$/;"	i
nargs	src/dm/impls/mesh/examples/tests/sieveTests.py	/^    import nargs$/;"	i
natural	include/petsc-private/dmdaimpl.h	/^  Vec                   natural;            \/* global vector for storing items in natural order *\/$/;"	m	struct:__anon23
ncolors	include/petsc-private/matimpl.h	/^  PetscInt       ncolors;          \/* number of colors *\/$/;"	m	struct:_p_MatFDColoring
ncolors	include/petsc-private/matimpl.h	/^  PetscInt       ncolors;          \/* number of colors *\/$/;"	m	struct:_p_MatTransposeColoring
ncolumns	include/petsc-private/matimpl.h	/^  PetscInt       *ncolumns;        \/* number of local columns for a color *\/$/;"	m	struct:_p_MatFDColoring
ncolumns	include/petsc-private/matimpl.h	/^  PetscInt       *ncolumns;        \/* number of local columns for a color *\/$/;"	m	struct:_p_MatTransposeColoring
ne	include/petsc-private/dmdaimpl.h	/^  PetscInt              ne;                  \/* number of elements *\/$/;"	m	struct:__anon23
nearnullsp	include/petsc-private/matimpl.h	/^  MatNullSpace           nearnullsp;       \/* near null space to be used by multigrid methods *\/$/;"	m	struct:_p_Mat
necessary	config/BuildSystem/RDict.py	/^  import build.buildGraph # This is necessary for us to create BuildGraph objects on load$/;"	i
necessary	config/BuildSystem/RDict.py	/^  import project          # This is necessary for us to create Project objects on load$/;"	i
needCount	include/petsc-private/characteristicimpl.h	/^  PetscInt    *needCount;       \/* Number of Items requested from other processes *\/$/;"	m	struct:_p_Characteristic
neighborCells	include/sieve/Partitioner.hh	/^      neighbors_type *neighborCells;$/;"	m	class:ALE::Partitioner::MeetVisitor
neighbors	include/petsc-private/characteristicimpl.h	/^  PetscMPIInt *neighbors;       \/* Ranks of neighbors *\/$/;"	m	struct:_p_Characteristic
neighbors	include/petsc-private/dmdaimpl.h	/^  PetscMPIInt           *neighbors;         \/* ranks of all neighbors and self *\/$/;"	m	struct:__anon23
neighbors_type	include/sieve/Partitioner.hh	/^      typedef std::set<typename Sieve::point_type> neighbors_type;$/;"	t	class:ALE::Partitioner::MeetVisitor
newCones	include/sieve/ISieve.hh	/^    newpoints_type       newCones;$/;"	m	class:ALE::IFSieve
newDepth	include/sieve/Sieve.hh	/^        int newDepth;$/;"	m	struct:ALE::Sieve::changeDepth
newHeight	include/sieve/Sieve.hh	/^        int newHeight;$/;"	m	struct:ALE::Sieve::changeHeight
newMarker	include/sieve/Sieve.hh	/^        marker_type newMarker;$/;"	m	struct:ALE::Sieve::changeMarker
newPoints	include/sieve/IField.hh	/^    std::set<newpoint_type> newPoints;$/;"	m	class:ALE::IGeneralSection
newSupports	include/sieve/ISieve.hh	/^    newpoints_type       newSupports;$/;"	m	class:ALE::IFSieve
new_label_type	src/dm/impls/mesh/examples/tests/mesh1.cxx	/^typedef ALE::LabelSifter<int,sieve_type::point_type> new_label_type;$/;"	t	file:
new_left	include/petscmat.h	/^  PetscInt     new_left;$/;"	m	struct:_PetscCoarsenData
new_md5	config/BuildSystem/build/compile/SIDL.py	/^  from hashlib import md5 as new_md5$/;"	i
new_md5	config/BuildSystem/build/compile/SIDL.py	/^  from md5 import new as new_md5$/;"	i
new_md5	config/BuildSystem/config/framework.py	/^  from hashlib import md5 as new_md5$/;"	i
new_md5	config/BuildSystem/config/framework.py	/^  from md5 import new as new_md5$/;"	i
new_md5	config/BuildSystem/config/package.py	/^  from hashlib import md5 as new_md5$/;"	i
new_md5	config/BuildSystem/config/package.py	/^  from md5 import new as new_md5$/;"	i
new_md5	config/BuildSystem/sourceDatabase.py	/^  from hashlib import md5 as new_md5$/;"	i
new_md5	config/BuildSystem/sourceDatabase.py	/^  from md5 import new as new_md5$/;"	i
new_md5	config/PETSc/package.py	/^  from hashlib import md5 as new_md5$/;"	i
new_md5	config/PETSc/package.py	/^  from md5 import new as new_md5$/;"	i
new_node	include/petscmat.h	/^  PetscCDIntNd *new_node;$/;"	m	struct:_PetscCoarsenData
new_tag	src/dm/impls/moab/dmmoab.cxx	/^  PetscBool           new_tag;$/;"	m	struct:__anon2	file:
newpoint_type	include/sieve/IField.hh	/^    typedef std::pair<point_type,int>       newpoint_type;$/;"	t	class:ALE::IGeneralSection
newpoints_type	include/sieve/ISieve.hh	/^    typedef std::map<point_type, std::vector<point_type> > newpoints_type;$/;"	t	class:ALE::IFSieve
newshift	include/petsc-private/matimpl.h	/^  PetscBool      newshift;$/;"	m	struct:__anon4
next	config/BuildSystem/build/fileset.py	/^  def next(self):$/;"	m	class:FileSetIterator
next	config/BuildSystem/patch.py	/^      def next(self):$/;"	m	class:PatchSet.parse.wrapumerate
next	include/petsc-private/bagimpl.h	/^  PetscBagItem  next;$/;"	m	struct:_n_PetscBagItem
next	include/petsc-private/dmimpl.h	/^  DMCoarsenHookLink next;$/;"	m	struct:_DMCoarsenHookLink
next	include/petsc-private/dmimpl.h	/^  DMGlobalToLocalHookLink next;$/;"	m	struct:_DMGlobalToLocalHookLink
next	include/petsc-private/dmimpl.h	/^  DMNamedVecLink next;$/;"	m	struct:_DMNamedVecLink
next	include/petsc-private/dmimpl.h	/^  DMRefineHookLink next;$/;"	m	struct:_DMRefineHookLink
next	include/petsc-private/dmimpl.h	/^  DMSubDomainHookLink next;$/;"	m	struct:_DMSubDomainHookLink
next	include/petsc-private/dmimpl.h	/^  DMWorkLink next;$/;"	m	struct:_DMWorkLink
next	include/petsc-private/dmpleximpl.h	/^  DMLabel   next;           \/* Linked list *\/$/;"	m	struct:_n_DMLabel
next	include/petsc-private/matimpl.h	/^  MatBaseName next;$/;"	m	struct:_p_MatBaseName
next	include/petsc-private/matimpl.h	/^  PetscMatStashSpace next;$/;"	m	struct:_MatStashSpace
next	include/petsc-private/meshimpl.h	/^  SieveLabel next;           \/* Linked list *\/$/;"	m	struct:Sieve_Label
next	include/petscmat.h	/^  struct _PetscCDArrNd *next;$/;"	m	struct:_PetscCDArrNd	typeref:struct:_PetscCDArrNd::_PetscCDArrNd
next	include/petscmat.h	/^  struct _PetscCDIntNd *next;$/;"	m	struct:_PetscCDIntNd	typeref:struct:_PetscCDIntNd::_PetscCDIntNd
next	include/petscoptions.h	/^  PetscOptions      next;$/;"	m	struct:_n_PetscOptions
next	include/petscoptions.h	/^  PetscOptions     next;$/;"	m	struct:__anon35
nextCodeEven	include/sieve/CartesianSieve.hh	/^    static void nextCodeEven(int a[], const int n, const int size) {$/;"	f	namespace:ALE::CartesianSieveDef
nextCodeOdd	include/sieve/CartesianSieve.hh	/^    static void nextCodeOdd(int a[], const int n, const int size) {$/;"	f	namespace:ALE::CartesianSieveDef
nfuncs	include/petsc-private/snesimpl.h	/^  PetscInt    nfuncs;             \/* number of function evaluations *\/$/;"	m	struct:_p_SNES
nhedges_Zoltan	src/dm/impls/mesh/meshzoltan.c	/^int nhedges_Zoltan;    \/\/ The number of hyperedges$/;"	v
nkernels	include/petsc-private/threadcommimpl.h	/^  PetscInt                nkernels;     \/* Maximum kernels launched *\/$/;"	m	struct:_p_PetscThreadComm
nleaves	include/petsc-private/sfimpl.h	/^  PetscInt        nleaves;      \/* Number of leaf vertices on current process (this process specifies a root for each leaf) *\/$/;"	m	struct:_p_PetscSF
nlist	include/petscoptions.h	/^  char              nlist;         \/* number of entries in list *\/$/;"	m	struct:_n_PetscOptions
nlocal	include/petsc-private/dmdaimpl.h	/^  PetscInt              nlocal,Nlocal;         \/* local size of local vector and global vector, includes the * w term *\/$/;"	m	struct:__anon23
nmax	include/petsc-private/matimpl.h	/^  PetscInt      nmax;                   \/* maximum stash size *\/$/;"	m	struct:__anon1
nmax	include/petsc-private/vecimpl.h	/^  PetscInt      nmax;                   \/* maximum stash size *\/$/;"	m	struct:__anon24
noCheck	config/BuildSystem/config/setCompilers.py	/^def noCheck(command, status, output, error):$/;"	f
noCheck	config/cmakeboot.py	/^def noCheck(command, status, output, error):$/;"	f
noCheckCommand	config/builder.py	/^def noCheckCommand(command, status, output, error):$/;"	f
no_configure	config/BuildSystem/config/base.py	/^  def no_configure(self):$/;"	m	class:Configure
no_configure	config/BuildSystem/config/compilers.py	/^  def no_configure(self):$/;"	m	class:Configure
no_configure	config/BuildSystem/config/setCompilers.py	/^  def no_configure(self):$/;"	m	class:Configure
noc	include/petsc-private/matimpl.h	/^  PetscBool  noc;        \/* this is a single component problem, hence user will not set MatStencil.c *\/$/;"	m	struct:__anon2
nonlocal	include/petsc-private/isimpl.h	/^  PetscInt     *total, *nonlocal;   \/* local representation of ALL indices across the comm as well as the nonlocal part. *\/$/;"	m	struct:_p_IS
nonmatching_computed	include/petsc-private/vecimpl.h	/^  PetscBool      nonmatching_computed;$/;"	m	struct:__anon26
nonxm	include/petsc-private/dmdaimpl.h	/^  PetscInt              nonxm,nonym,nonzm;     \/* the nonoverlapping sizes in the case of a subdomain da *\/$/;"	m	struct:__anon23
nonxs	include/petsc-private/dmdaimpl.h	/^  PetscInt              nonxs,nonys,nonzs;     \/* the nonoverlapping starts in the case of a subdomain da *\/$/;"	m	struct:__anon23
nonym	include/petsc-private/dmdaimpl.h	/^  PetscInt              nonxm,nonym,nonzm;     \/* the nonoverlapping sizes in the case of a subdomain da *\/$/;"	m	struct:__anon23
nonys	include/petsc-private/dmdaimpl.h	/^  PetscInt              nonxs,nonys,nonzs;     \/* the nonoverlapping starts in the case of a subdomain da *\/$/;"	m	struct:__anon23
nonzero_guess	include/petsc-private/pcimpl.h	/^  PetscBool      nonzero_guess; \/* used by PCKSP, PCREDUNDANT and PCHMPI *\/$/;"	m	struct:_p_PC
nonzm	include/petsc-private/dmdaimpl.h	/^  PetscInt              nonxm,nonym,nonzm;     \/* the nonoverlapping sizes in the case of a subdomain da *\/$/;"	m	struct:__anon23
nonzs	include/petsc-private/dmdaimpl.h	/^  PetscInt              nonxs,nonys,nonzs;     \/* the nonoverlapping starts in the case of a subdomain da *\/$/;"	m	struct:__anon23
nooffprocentries	include/petsc-private/matimpl.h	/^  PetscBool              nooffprocentries,nooffproczerorows;$/;"	m	struct:_p_Mat
nooffproczerorows	include/petsc-private/matimpl.h	/^  PetscBool              nooffprocentries,nooffproczerorows;$/;"	m	struct:_p_Mat
noptionhandler	include/petsc-private/petscimpl.h	/^  PetscInt             noptionhandler;$/;"	m	struct:_p_PetscObject
norm	include/petsc-private/matimpl.h	/^  PetscErrorCode (*norm)(Mat,NormType,PetscReal*);$/;"	m	struct:_MatOps
norm	include/petsc-private/snesimpl.h	/^  PetscReal   norm;               \/* residual norm of current iterate *\/$/;"	m	struct:_p_SNES
norm	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*norm)(Vec,NormType,PetscReal*);        \/* z = sqrt(x^H * x) *\/$/;"	m	struct:_VecOps
norm_init	include/petsc-private/snesimpl.h	/^  PetscReal   norm_init;          \/* the initial norm value *\/$/;"	m	struct:_p_SNES
norm_init_set	include/petsc-private/snesimpl.h	/^  PetscBool   norm_init_set;      \/* the initial norm has been set *\/$/;"	m	struct:_p_SNES
norm_last	include/petsc-private/snesimpl.h	/^  PetscReal norm_last;           \/* function norm from last iteration *\/$/;"	m	struct:__anon5
norm_local	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*norm_local)(Vec,NormType,PetscReal*);$/;"	m	struct:_VecOps
normpath	config/BuildSystem/patch.py	/^from os.path import exists, isabs, isfile, abspath, normpath$/;"	i
norms	include/petsc-private/linesearchimpl.h	/^  PetscBool           norms;$/;"	m	struct:_p_LineSearch
normsupporttable	include/petsc-private/kspimpl.h	/^  PetscInt        normsupporttable[KSP_NORM_MAX][PC_SIDE_MAX]; \/* Table of supported norms and pc_side, see KSPSetSupportedNorm() *\/$/;"	m	struct:_p_KSP
normtype	include/petsc-private/kspimpl.h	/^  KSPNormType    normtype;          \/* type of norm used for convergence tests *\/$/;"	m	struct:_p_KSP
normtype	include/petsc-private/snesimpl.h	/^  SNESNormType normtype;          \/* Norm computation type for SNES instance *\/$/;"	m	struct:_p_SNES
notstandardinclude	config/PETSc/Configure.py	/^    def notstandardinclude(path):$/;"	f	function:Configure.dumpCMakeConfig
np	bin/pythonscripts/PetscBinaryIO.py	/^import numpy as np$/;"	i
np	config/PETSc/FEM.py	/^    import numpy as np$/;"	i
nports	include/petscdraw.h	/^  PetscInt  nports;$/;"	m	struct:__anon15
nprocessed	include/petsc-private/matimpl.h	/^  PetscInt      nprocessed;             \/* number of messages already processed *\/$/;"	m	struct:__anon1
nprocessed	include/petsc-private/vecimpl.h	/^  PetscInt      nprocessed;             \/* number of messages already processed *\/$/;"	m	struct:__anon24
nprocs	include/petsc-private/vecimpl.h	/^  PetscInt      *nprocs;                \/* tmp data used both during scatterbegin and end *\/$/;"	m	struct:__anon24
nranks	include/petsc-private/sfimpl.h	/^  PetscInt        nranks;       \/* Number of ranks owning roots connected to my leaves *\/$/;"	m	struct:_p_PetscSF
nrecvs	include/petsc-private/matimpl.h	/^  PetscInt      nsends,nrecvs;          \/* numbers of sends and receives *\/$/;"	m	struct:__anon1
nrecvs	include/petsc-private/vecimpl.h	/^  PetscInt      nsends,nrecvs;          \/* numbers of sends and receives *\/$/;"	m	struct:__anon24
nreds	include/petsc-private/threadcommimpl.h	/^  PetscInt              nreds;                              \/* Number of reductions in operation *\/$/;"	m	struct:_p_PetscThreadCommReduction
nroots	include/petsc-private/sfimpl.h	/^  PetscInt        nroots;       \/* Number of root vertices on current process (candidates for incoming edges) *\/$/;"	m	struct:_p_PetscSF
nrows	include/petsc-private/matimpl.h	/^  PetscInt       *nrows;           \/* number of local rows for each color *\/$/;"	m	struct:_p_MatFDColoring
nrows	include/petsc-private/matimpl.h	/^  PetscInt       *nrows;           \/* number of local rows for each color *\/$/;"	m	struct:_p_MatTransposeColoring
nrows	include/petsc-private/matimpl.h	/^  PetscInt   nrows;                         \/* number of non-zero rows *\/$/;"	m	struct:__anon3
nsends	include/petsc-private/matimpl.h	/^  PetscInt      nsends,nrecvs;          \/* numbers of sends and receives *\/$/;"	m	struct:__anon1
nsends	include/petsc-private/vecimpl.h	/^  PetscInt      nsends,nrecvs;          \/* numbers of sends and receives *\/$/;"	m	struct:__anon24
nshift	include/petsc-private/matimpl.h	/^  PetscInt       nshift,nshift_max;$/;"	m	struct:__anon4
nshift_max	include/petsc-private/matimpl.h	/^  PetscInt       nshift,nshift_max;$/;"	m	struct:__anon4
ntruebounds	include/petsc-private/snesimpl.h	/^  PetscInt    ntruebounds;       \/* number of non-infinite bounds set for VI box constraints *\/$/;"	m	struct:_p_SNES
nub	config/PETSc/Configure.py	/^    def nub(lst):$/;"	f	function:Configure.dumpCMakeConfig
nublast	config/PETSc/Configure.py	/^    def nublast(lst):$/;"	f	function:Configure.dumpCMakeConfig
nullsp	include/petsc-private/kspimpl.h	/^  MatNullSpace nullsp;      \/* Null space of the operator, removed from Krylov space *\/$/;"	m	struct:_p_KSP
nullsp	include/petsc-private/matimpl.h	/^  MatNullSpace           nullsp;           \/* null space (operator is singular) *\/$/;"	m	struct:_p_Mat
nullspaceConstructors	include/petsc-private/dmimpl.h	/^  NullSpaceFunc           nullspaceConstructors[10];$/;"	m	struct:_p_DM
num	include/sieve/ALE_mem.hh	/^      long long num;$/;"	m	struct:ALE::MemoryLogger::Log
numAllocs	include/sieve/ALE_mem.hh	/^    int         numAllocs;$/;"	m	class:ALE::malloc_allocator
numBasisFuncs	include/petscdm.h	/^  PetscInt         numBasisFuncs; \/* The number of finite element basis functions on an element *\/$/;"	m	struct:__anon19
numBlocks	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^  numBlocks  = int(sys.argv[n*5+4])$/;"	v
numBlocks	bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py	/^  numBlocks  = int(sys.argv[n*5+4])$/;"	v
numCases	include/sieve/Partitioner.hh	/^      int numCases;$/;"	m	class:ALE::Partitioner::FaceRecognizer
numCells	include/petscdmmesh_formats.hh	/^      unsigned int numCells; \/\/ The number of cells (co-dim 0)$/;"	m	class:ALE::Dolfin::XMLMesh
numCells	include/sieve/Partitioner.hh	/^      const int numCells;$/;"	m	class:ALE::Partitioner::MeetVisitor
numCells	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^  PetscInt   numCells;    \/\/ If possible, set the total number of cells$/;"	m	struct:__anon14	file:
numCells	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^  PetscInt   numCells;    \/\/ If possible, set the total number of cells$/;"	m	struct:__anon5	file:
numCells	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^  int     numCells;$/;"	m	struct:__anon4	file:
numClasses	include/petsclog.h	/^  int                numClasses; \/* The number of logging classes *\/$/;"	m	struct:_n_PetscClassPerfLog
numClasses	include/petsclog.h	/^  int               numClasses; \/* The number of classes registered *\/$/;"	m	struct:_n_PetscClassRegLog
numComponents	include/petscdm.h	/^  PetscInt         numComponents; \/* The number of components for each basis function *\/$/;"	m	struct:__anon19
numCorners	include/sieve/Selection.hh	/^      const int              numCorners;$/;"	m	class:ALE::Selection::FaceInserterV
numCorners	include/sieve/Selection.hh	/^      const int             numCorners;$/;"	m	class:ALE::Selection::FaceInserter
numDof	include/petsc-private/isimpl.h	/^  PetscInt numDof;       \/* Describes layout of storage, point --> (constant # of values, (p - pStart)*constant # of values) *\/$/;"	m	struct:_n_PetscUniformSection
numEvents	include/petsclog.h	/^  int                numEvents;  \/* The number of logging events *\/$/;"	m	struct:_n_PetscEventPerfLog
numEvents	include/petsclog.h	/^  int               numEvents;  \/* The number of registered events *\/$/;"	m	struct:_n_PetscEventRegLog
numFaceVertices	include/sieve/Partitioner.hh	/^      int numFaceVertices[maxSize];$/;"	m	class:ALE::Partitioner::FaceRecognizer
numFaceVertices	include/sieve/Selection.hh	/^    static int numFaceVertices(const Obj<Mesh>& mesh) {$/;"	f	class:ALE::Selection
numFaceVertices	include/sieve/Selection.hh	/^    static int numFaceVertices(const Obj<Mesh>& mesh, const unsigned int numCorners) {$/;"	f	class:ALE::Selection
numFaces	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^  int     numFaces;$/;"	m	struct:__anon4	file:
numFailures	include/petsc-private/snesimpl.h	/^  PetscInt    numFailures;        \/* number of unsuccessful step attempts *\/$/;"	m	struct:_p_SNES
numFieldComp	include/petsc-private/characteristicimpl.h	/^  PetscInt     numFieldComp;    \/* Number of field components (should be the mesh dimension) *\/$/;"	m	struct:_p_Characteristic
numFieldComponents	include/petsc-private/isimpl.h	/^  PetscInt                     *numFieldComponents; \/* The number of components in each field *\/$/;"	m	struct:_p_PetscSection
numFields	include/petsc-private/dmimpl.h	/^  PetscInt                numFields;$/;"	m	struct:_p_DM
numFields	include/petsc-private/isimpl.h	/^  PetscInt                      numFields;    \/* The number of fields making up the degrees of freedom *\/$/;"	m	struct:_p_PetscSection
numFields	include/sieve/ISieve.hh	/^      PetscInt     numFields;$/;"	m	class:ALE::ISieveVisitor::SizeWithBCVisitor
numIds	include/petsc-private/characteristicimpl.h	/^  PetscInt     numIds;          \/* Number of integers necessary to identify a mesh element *\/$/;"	m	struct:_p_Characteristic
numItems	src/dm/impls/mesh/examples/tests/stl1.cxx	/^  int numItems; \/\/ The number of items per container$/;"	m	struct:__anon2	file:
numLeaves	include/sieve/ISieve.hh	/^    int numLeaves() {$/;"	f	class:ALE::IFSieve
numLevels	src/dm/impls/mesh/examples/tests/refinementTest.cxx	/^  PetscInt numLevels; \/\/ The number of refinement levels$/;"	m	struct:__anon10	file:
numLinearSolveFailures	include/petsc-private/snesimpl.h	/^  PetscInt    numLinearSolveFailures;$/;"	m	struct:_p_SNES
numMessages	include/petsclog.h	/^  PetscLogDouble numMessages;   \/* The number of messages in this event *\/$/;"	m	struct:__anon65
numNeighbors	include/petsc-private/characteristicimpl.h	/^  PetscInt     numNeighbors;    \/* Number of neighboring processes *\/$/;"	m	struct:_p_Characteristic
numPointRanks	include/sieve/Overlap.hh	/^  index_type  numPointRanks;     \/\/ Number of partner process ranks which share a given point (needs search)$/;"	m	class:PETSc::Overlap
numProcs	src/dm/impls/mesh/examples/tests/ex1.c	/^  PetscMPIInt   numProcs;          \/* The number of processes *\/$/;"	m	struct:__anon16	file:
numProcs	src/dm/impls/mesh/examples/tests/ex2.c	/^  PetscMPIInt   numProcs;          \/* The number of processes *\/$/;"	m	struct:__anon17	file:
numProcs	src/dm/impls/mesh/examples/tests/ex3.c	/^  PetscMPIInt   numProcs;          \/* The number of processes *\/$/;"	m	struct:__anon15	file:
numQuadPoints	include/petscdm.h	/^  PetscInt         numQuadPoints; \/* The number of quadrature points on an element *\/$/;"	m	struct:__anon19
numRanks	include/sieve/Overlap.hh	/^  PetscInt    numRanks;          \/\/ Number of partner processes$/;"	m	class:PETSc::Overlap
numReductions	include/petsclog.h	/^  PetscLogDouble numReductions; \/* The number of reductions in this event *\/$/;"	m	struct:__anon65
numRoots	include/sieve/ISieve.hh	/^    int numRoots() {$/;"	f	class:ALE::IFSieve
numStages	include/petsclog.h	/^  int              numStages;   \/* The number of registered stages *\/$/;"	m	struct:_n_PetscStageLog
numStrata	include/petsc-private/dmpleximpl.h	/^  PetscInt  numStrata;      \/* Number of integer values *\/$/;"	m	struct:_n_DMLabel
numStrata	include/petsc-private/meshimpl.h	/^  PetscInt   numStrata;      \/* Number of integer values *\/$/;"	m	struct:Sieve_Label
numStrata	src/dm/impls/plex/examples/tests/ex6.c	/^  PetscInt  numStrata;    \/* The number of label strata *\/$/;"	m	struct:__anon2	file:
numVelocityComp	include/petsc-private/characteristicimpl.h	/^  PetscInt     numVelocityComp; \/* Number of velocity components (should be the mesh dimension) *\/$/;"	m	struct:_p_Characteristic
num_ass	include/petsc-private/matimpl.h	/^  PetscInt               num_ass;          \/* number of times matrix has been assembled *\/$/;"	m	struct:_p_Mat
num_fortran_func_pointers	include/petsc-private/petscimpl.h	/^  PetscInt             num_fortran_func_pointers;                        \/* number of Fortran function pointers allocated *\/$/;"	m	struct:_p_PetscObject
num_fortrancallback	include/petsc-private/petscimpl.h	/^  PetscInt             num_fortrancallback[PETSC_FORTRAN_CALLBACK_MAXTYPE];$/;"	m	struct:_p_PetscObject
num_snes_failures	include/petsc-private/tsimpl.h	/^  PetscInt num_snes_failures;$/;"	m	struct:_p_TS
num_type	include/sieve/BasicCommunication.hh	/^    typedef size_t                                 num_type;$/;"	t	class:ALE::MPIMover
number	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^  PetscInt   number;      \/\/ Number of each class to create$/;"	m	struct:__anon14	file:
number	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^  PetscInt   number;      \/\/ Number of each class to create$/;"	m	struct:__anon5	file:
numbering_type	include/sieve/INumbering.hh	/^    typedef INumbering<point_type, value_type, alloc_type>                                       numbering_type;$/;"	t	class:ALE::INumberingFactory
numbering_type	include/sieve/Mesh.hh	/^    typedef typename MeshNumberingFactory::numbering_type             numbering_type;$/;"	t	class:ALE::Bundle
numbering_type	include/sieve/Mesh.hh	/^    typedef typename MeshNumberingFactory::numbering_type             numbering_type;$/;"	t	class:ALE::IBundle
numbering_type	include/sieve/Mesh.hh	/^    typedef typename base_type::numbering_type        numbering_type;$/;"	t	class:ALE::IMesh
numbering_type	include/sieve/Mesh.hh	/^    typedef typename base_type::numbering_type        numbering_type;$/;"	t	class:ALE::Mesh
numbering_type	include/sieve/Numbering.hh	/^    typedef Numbering<point_type, value_type, alloc_type>   numbering_type;$/;"	t	class:ALE::NumberingFactory
numbering_type	src/dm/impls/mesh/examples/tests/overlap2.cxx	/^typedef ALE::New::Numbering<topology_type>        numbering_type;$/;"	t	file:
numberings_type	include/sieve/INumbering.hh	/^    typedef std::map<bundle_type*, std::map<std::string, std::map<int, Obj<numbering_type> > > > numberings_type;$/;"	t	class:ALE::INumberingFactory
numberings_type	include/sieve/Numbering.hh	/^    typedef std::map<bundle_type*, std::map<std::string, std::map<int, Obj<numbering_type> > > > numberings_type;$/;"	t	class:ALE::NumberingFactory
numbermonitors	include/petsc-private/kspimpl.h	/^  PetscInt  numbermonitors;                                   \/* to, for instance, print residual norm, etc. *\/$/;"	m	struct:_p_KSP
numbermonitors	include/petsc-private/snesimpl.h	/^  PetscInt            numbermonitors;                                             \/* number of monitors *\/$/;"	m	struct:_p_SNES
numbermonitors	include/petsc-private/tsimpl.h	/^  PetscInt  numbermonitors;                                 \/* to, for instance, print residual norm, etc. *\/$/;"	m	struct:_p_TS
numbers	include/sieve/Partitioner.hh	/^      std::map<point_type, point_type> numbers;$/;"	m	class:ALE::Partitioner::MeshManager
numpy	config/PETSc/FEM.py	/^    import numpy$/;"	i
numpy	config/PETSc/packages/Numpy.py	/^      import numpy$/;"	i
nvtxs_Zoltan	src/dm/impls/mesh/meshzoltan.c	/^int nvtxs_Zoltan;      \/\/ The number of vertices$/;"	v
nvwork	include/petsc-private/snesimpl.h	/^  PetscInt    nvwork;$/;"	m	struct:_p_SNES
nwork	include/petsc-private/kspimpl.h	/^  PetscInt       nwork;$/;"	m	struct:_p_KSP
nwork	include/petsc-private/linesearchimpl.h	/^  PetscInt            nwork;$/;"	m	struct:_p_LineSearch
nwork	include/petsc-private/snesimpl.h	/^  PetscInt    nwork;$/;"	m	struct:_p_SNES
nwork	include/petsc-private/tsimpl.h	/^  PetscInt nwork;$/;"	m	struct:_p_TS
nworkThreads	include/petsc-private/threadcommimpl.h	/^  PetscInt                nworkThreads; \/* Number of threads in the pool *\/$/;"	m	struct:_p_PetscThreadComm
nz_allocated	include/petscmat.h	/^  PetscLogDouble nz_allocated,nz_used,nz_unneeded;   \/* number of nonzeros *\/$/;"	m	struct:__anon93
nz_unneeded	include/petscmat.h	/^  PetscLogDouble nz_allocated,nz_used,nz_unneeded;   \/* number of nonzeros *\/$/;"	m	struct:__anon93
nz_used	include/petscmat.h	/^  PetscLogDouble nz_allocated,nz_used,nz_unneeded;   \/* number of nonzeros *\/$/;"	m	struct:__anon93
o	include/sieve/ISieve.hh	/^      size_t               i, o;$/;"	m	class:ALE::ISieveVisitor::PointRetriever
o	include/sieve/ISieve.hh	/^      size_t              i, o;$/;"	m	class:ALE::ISieveVisitor::ArrowRetriever
o	include/sieve/ISieve.hh	/^      size_t       i, o;$/;"	m	class:ALE::ISieveVisitor::FilteredPointRetriever
oAlloc_type	include/sieve/INumbering.hh	/^    typedef typename alloc_type::template rebind<oValue_type>::other                             oAlloc_type;$/;"	t	class:ALE::INumberingFactory
oArrows	include/sieve/ISieve.hh	/^      oriented_arrow_type oArrows[size];$/;"	m	class:ALE::ISieveVisitor::ArrowRetriever
oConeArray	include/sieve/Mesh.hh	/^    typedef typename sieve_alg_type::orientedConeArray                oConeArray;$/;"	t	class:ALE::Bundle
oConeArray	include/sieve/Mesh.hh	/^    typedef typename sieve_alg_type::orientedConeArray                oConeArray;$/;"	t	class:ALE::IBundle
oIndexArray	include/sieve/Mesh.hh	/^    typedef std::vector<oIndex_type>                                  oIndexArray;$/;"	t	class:ALE::Bundle
oIndexArray	include/sieve/Mesh.hh	/^    typedef std::vector<oIndex_type>                                  oIndexArray;$/;"	t	class:ALE::IBundle
oIndex_type	include/sieve/Mesh.hh	/^    typedef std::pair<index_type, int>                                oIndex_type;$/;"	t	class:ALE::Bundle
oIndex_type	include/sieve/Mesh.hh	/^    typedef std::pair<index_type, int>                                oIndex_type;$/;"	t	class:ALE::IBundle
oPointArray	include/sieve/Selection.hh	/^    typedef std::vector<oPoint_type>                        oPointArray;$/;"	t	class:ALE::Selection
oPointArray	include/sieve/SieveBuilder.hh	/^    typedef std::vector<oPoint_type>                        oPointArray;$/;"	t	class:ALE::SieveBuilder
oPoint_type	include/sieve/Selection.hh	/^    typedef std::pair<typename sieve_type::point_type, int> oPoint_type;$/;"	t	class:ALE::Selection
oPoint_type	include/sieve/SieveBuilder.hh	/^    typedef std::pair<typename sieve_type::point_type, int> oPoint_type;$/;"	t	class:ALE::SieveBuilder
oPoints	include/sieve/ISieve.hh	/^      oriented_point_type *oPoints;$/;"	m	class:ALE::ISieveVisitor::FilteredPointRetriever
oPoints	include/sieve/ISieve.hh	/^      oriented_point_type *oPoints;$/;"	m	class:ALE::ISieveVisitor::PointRetriever
oValue_alloc_type	include/sieve/Numbering.hh	/^    typedef typename alloc_type::template rebind<oValue_type>::other         oValue_alloc_type;$/;"	t	class:ALE::NumberingFactory
oValue_type	include/sieve/INumbering.hh	/^    typedef typename ALE::Pair<value_type, value_type>                                           oValue_type;$/;"	t	class:ALE::INumberingFactory
oValue_type	include/sieve/Numbering.hh	/^    typedef typename order_type::value_type                 oValue_type;$/;"	t	class:ALE::NumberingFactory
obj	include/petsc-private/logimpl.h	/^  PetscObject    obj;      \/* The associated PetscObject *\/$/;"	m	struct:_Object
obj	include/sieve/ALE_mem.hh	/^    X  obj() const     {assertNull(false); return *objPtr;};$/;"	f	class:ALE::Obj
objPtr	include/sieve/ALE_mem.hh	/^    X*        objPtr; \/\/ object pointer$/;"	m	class:ALE::Obj
object	include/petscoptions.h	/^  PetscObject      object;$/;"	m	struct:__anon35
object	include/sieve/ALE_mem.hh	/^    X  object() const  {assertNull(false); return *objPtr;};$/;"	f	class:ALE::Obj
objectivectx	include/petsc-private/snesimpl.h	/^  void *objectivectx;$/;"	m	struct:_p_DMSNES
objects	config/BuildSystem/RDict.py	/^  import build.buildGraph # This is necessary for us to create BuildGraph objects on load$/;"	i
objects	config/BuildSystem/RDict.py	/^  import project          # This is necessary for us to create Project objects on load$/;"	i
odd	src/dm/impls/mesh/examples/tutorials/ex1.c	/^  SectionInt odd;                    \/\/ Section with cell number in each odd cell$/;"	m	struct:__anon6	file:
offset	include/petsc-private/bagimpl.h	/^  PetscInt      offset;$/;"	m	struct:_n_PetscBagItem
offset	include/sieve/Partitioner.hh	/^      int                        offset;$/;"	m	class:ALE::Partitioner::AdjVisitor
offsets	include/sieve/ISieve.hh	/^      int               *offsets;$/;"	m	class:ALE::ISieveVisitor::RestrictVecVisitor
offsets	include/sieve/Partitioner.hh	/^      int         *offsets;$/;"	m	class:ALE::Partitioner::OffsetVisitor
offsets_type	include/sieve/ISieve.hh	/^    typedef index_type *offsets_type;$/;"	t	class:ALE::IFSieve
ofill	include/petsc-private/dmdaimpl.h	/^  PetscInt              *ofill,*dfill;$/;"	m	struct:__anon23
ofillcols	include/petsc-private/dmdaimpl.h	/^  PetscInt              *ofillcols;$/;"	m	struct:__anon23
oldRetrieve	config/BuildSystem/retrieval.py	/^  def oldRetrieve(self, url, root = None, canExist = 0, force = 0):$/;"	f
oldnmax	include/petsc-private/matimpl.h	/^  PetscInt      oldnmax;                \/* the nmax value used previously *\/$/;"	m	struct:__anon1
oldnmax	include/petsc-private/vecimpl.h	/^  PetscInt      oldnmax;                \/* the nmax value used previously *\/$/;"	m	struct:__anon24
olist	include/petsc-private/petscimpl.h	/^  PetscObjectList      olist;$/;"	m	struct:_p_PetscObject
on	config/BuildSystem/RDict.py	/^  import build.buildGraph # This is necessary for us to create BuildGraph objects on load$/;"	i
on	config/BuildSystem/RDict.py	/^  import project          # This is necessary for us to create Project objects on load$/;"	i
onClick	include/web/AMSOptions.py	/^    def onClick(self, sender):$/;"	m	class:AMSJavascriptExample
onClick	include/web/AMSSnoopObjects.py	/^    def onClick(self, sender):$/;"	m	class:AMSSnoopObjects
onClick	include/web/AMSSnoopStack.py	/^    def onClick(self, sender):$/;"	m	class:AMSSnoopStack
onModuleLoad	include/web/AMSOptions.py	/^    def onModuleLoad(self):$/;"	m	class:AMSJavascriptExample
onModuleLoad	include/web/AMSSnoopObjects.py	/^    def onModuleLoad(self):$/;"	m	class:AMSSnoopObjects
onModuleLoad	include/web/AMSSnoopStack.py	/^    def onModuleLoad(self):$/;"	m	class:AMSSnoopStack
onRemoteError	include/web/AMS.py	/^    def onRemoteError(self, code, errobj, request_info):$/;"	m	class:AMS_Comm
onRemoteError	include/web/AMS.py	/^    def onRemoteError(self, code, errobj, request_info):$/;"	m	class:AMS_Memory
onRemoteResponse	include/web/AMS.py	/^    def onRemoteResponse(self, response, request_info):$/;"	m	class:AMS_Comm
onRemoteResponse	include/web/AMS.py	/^    def onRemoteResponse(self, response, request_info):$/;"	m	class:AMS_Memory
oncomm	include/petsc-private/isimpl.h	/^  PetscErrorCode (*oncomm)(IS,MPI_Comm,PetscCopyMode,IS*);$/;"	m	struct:_ISOps
op	include/petsc-private/threadcommimpl.h	/^  PetscThreadCommReductionOp    op;             \/* The reduction operation *\/$/;"	m	struct:_p_PetscThreadCommRedCtx
open	include/petscdmmesh_formats.hh	/^      virtual void open(const std::string& filename) {};$/;"	f	class:ALE::Dolfin::XMLObject
open	include/petscdmmesh_formats.hh	/^      void open(std::string filename) {};$/;"	f	class:ALE::Dolfin::XMLMesh
openPipe	config/BuildSystem/script.py	/^    def openPipe(command):$/;"	f	function:Script.importModule
operator	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^  operator   = sys.argv[n*5+5]$/;"	v
operator	bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py	/^  operator   = sys.argv[n*5+5]$/;"	v
operator !=	include/sieve/ALE_containers.hh	/^      virtual bool              operator!=(const iterator& iter) const {return this->_itor != iter._itor;};$/;"	f	class:ALE::IndexSequence::iterator
operator !=	include/sieve/ALE_containers.hh	/^    bool operator!=(const MinimalArrow& q) const {$/;"	f	struct:ALE::MinimalArrow
operator !=	include/sieve/ALE_containers.hh	/^    bool operator!=(const Pair& q) const {$/;"	f	class:ALE::Pair
operator !=	include/sieve/ALE_containers.hh	/^    bool operator!=(const Point& q) const {$/;"	f	class:ALE::Point
operator !=	include/sieve/ALE_mem.hh	/^    bool operator!=(const Obj& obj) { return (this->objPtr != obj.objPtr);};$/;"	f	class:ALE::Obj
operator !=	include/sieve/ALE_mem.hh	/^  inline bool operator!=(const malloc_allocator<T>&, const malloc_allocator<T>&) {$/;"	f	namespace:ALE
operator !=	include/sieve/CartesianSieve.hh	/^        virtual bool              operator!=(const iterator& iter) const {return this->_pos != iter._pos;};$/;"	f	class:ALE::CartesianSieveDef::ConeSequence::iterator
operator !=	include/sieve/CartesianSieve.hh	/^        virtual bool              operator!=(const iterator& iter) const {return this->_pos != iter._pos;};$/;"	f	class:ALE::CartesianSieveDef::SupportSequence::iterator
operator !=	include/sieve/CartesianSieve.hh	/^        virtual bool             operator!=(const iterator& iter) const {return this->_value != iter._value;};$/;"	f	class:ALE::CartesianSieveDef::PointSequence::iterator
operator !=	include/sieve/Field.hh	/^      bool operator!=(const const_iterator& iter) const {return this->_iter != iter._iter;};$/;"	f	class:ALE::SetFromMap::const_iterator
operator !=	include/sieve/ISieve.hh	/^        virtual bool              operator!=(const const_iterator& iter) const {return this->_pos != iter._pos;};$/;"	f	class:ALE::IFSieveDef::Sequence::const_iterator
operator !=	include/sieve/ISieve.hh	/^      bool operator!=(const const_iterator& iter) const {return this->_p != iter._p;};$/;"	f	class:ALE::Interval::const_iterator
operator !=	include/sieve/LabelSifter.hh	/^        virtual bool              operator!=(const iterator_base& iter) const {return this->_itor != iter._itor;};$/;"	f	class:ALE::NewSifterDef::IndexSequenceTraits::iterator_base
operator !=	include/sieve/Mesh.hh	/^  operator!=(const indexSet& __x, const indexSet& __y) {$/;"	f	namespace:ALE
operator !=	include/sieve/Overlap.hh	/^    virtual bool             operator!=(const iterator& iter) const {return points != iter.points;};$/;"	f	class:PETSc::DualSequence::iterator
operator !=	include/sieve/Sifter.hh	/^        virtual bool              operator!=(const iterator_base& iter) const {return this->_itor != iter._itor;};$/;"	f	class:ALE::SifterDef::IndexSequenceTraits::iterator_base
operator ()	include/petscdmmesh.hh	/^  const typename Arrow::source_type& operator()(const Arrow& x) const {return x.source;}$/;"	f	struct:SelectSource
operator ()	include/petscdmmesh.hh	/^  const typename Pair::first_type& operator()(const Pair& x) const {return x.first;}$/;"	f	struct:Select1st
operator ()	include/petscdmmesh.hh	/^  typename Arrow::source_type& operator()(Arrow& x) const {return x.source;}$/;"	f	struct:SelectSource
operator ()	include/petscdmmesh.hh	/^  typename Pair::first_type& operator()(Pair& x) const {return x.first;}$/;"	f	struct:Select1st
operator ()	include/sieve/ALE_args.hh	/^    ArgDB& operator()(const ArgDB& argDB) {$/;"	f	class:ALE::ArgDB
operator ()	include/sieve/ALE_args.hh	/^    ArgDB& operator()(const string& name, const AnyArg& descriptor) {$/;"	f	class:ALE::ArgDB
operator ()	include/sieve/ALE_args.hh	/^    ArgDB& operator()(const string& name, const string& helpLine) {$/;"	f	class:ALE::ArgDB
operator ()	include/sieve/ALE_args.hh	/^    ArgDB& operator()(const string& name, const string& helpLine, const AnyArg& descriptor) {$/;"	f	class:ALE::ArgDB
operator ()	include/sieve/ALE_containers.hh	/^      bool operator()(const MinimalArrow& p, const MinimalArrow& q) const {$/;"	f	class:ALE::MinimalArrow::less_than
operator ()	include/sieve/ALE_containers.hh	/^      bool operator()(const Pair& p, const Pair& q) const {$/;"	f	class:ALE::Pair::less_than
operator ()	include/sieve/ALE_containers.hh	/^      bool operator()(const Point& p, const Point& q) const {$/;"	f	class:ALE::Point::less_than
operator ()	include/sieve/ALE_containers.hh	/^      void operator()(arrow_type& a) { a.target = this->_newTarget;}$/;"	f	struct:ALE::Arrow::targetChanger
operator ()	include/sieve/ALE_containers.hh	/^      void operator()(arrow_type& a) {a.source = this->_newSource;}$/;"	f	struct:ALE::Arrow::sourceChanger
operator ()	include/sieve/LabelSifter.hh	/^        void operator()(arrow_type& a) { a.target = this->_newTarget;}$/;"	f	struct:ALE::NewSifterDef::Arrow::targetChanger
operator ()	include/sieve/LabelSifter.hh	/^        void operator()(arrow_type& a) {a.source = this->_newSource;}$/;"	f	struct:ALE::NewSifterDef::Arrow::sourceChanger
operator ()	include/sieve/Overlap.hh	/^    bool operator()(index_type i, index_type j) {return values[i] < values[j];};$/;"	f	class:PETSc::Overlap::sort_indices
operator ()	include/sieve/ParallelMapping.hh	/^      bool operator()(const std::pair<T,T>& x, const std::pair<T,T>& y) const {$/;"	f	struct:ALE::OverlapBuilder::lessPair
operator ()	include/sieve/ParallelMapping.hh	/^      std::pair<T,std::pair<T,T> > operator()(const std::pair<T,T>& x, const std::pair<T,T>& y) const {$/;"	f	struct:ALE::OverlapBuilder::mergePair
operator ()	include/sieve/ParallelMapping.hh	/^    _Tp& operator()(_Tp& x) const {return x;}$/;"	f	struct:ALE::Identity
operator ()	include/sieve/ParallelMapping.hh	/^    bool operator()(_Tp& y) const {return x == y;}$/;"	f	struct:ALE::IsEqual
operator ()	include/sieve/ParallelMapping.hh	/^    bool operator()(_Tp& y, _Tp& dummy) const {return x == y;}$/;"	f	struct:ALE::IsEqual
operator ()	include/sieve/ParallelMapping.hh	/^    bool operator()(const _Tp& y) const {return x == y;}$/;"	f	struct:ALE::IsEqual
operator ()	include/sieve/ParallelMapping.hh	/^    bool operator()(const _Tp& y, const _Tp& dummy) const {return x == y;}$/;"	f	struct:ALE::IsEqual
operator ()	include/sieve/ParallelMapping.hh	/^    const _Tp& operator()(const _Tp& x) const {return x;}$/;"	f	struct:ALE::Identity
operator ()	include/sieve/Partitioner.hh	/^      bool operator()(point_type cellA, point_type cellB, int meetSize) {$/;"	f	class:ALE::Partitioner::FaceRecognizer
operator ()	include/sieve/Partitioner.hh	/^      bool operator()(point_type cellA, point_type cellB, int meetSize) {$/;"	f	class:ALE::Partitioner::SimpleFaceRecognizer
operator ()	include/sieve/Selection.hh	/^      void operator()(const Obj<PointArray>& face) {$/;"	f	class:ALE::Selection::FaceInserter
operator ()	include/sieve/Selection.hh	/^      void operator()(const Obj<PointArray>& face) {$/;"	f	class:ALE::Selection::FaceInserterV
operator ()	include/sieve/Sieve.hh	/^        void operator()(Rec& r) { r.degree = this->_newDegree; }$/;"	f	struct:ALE::SieveDef::Rec::degreeAdjuster
operator ()	include/sieve/Sieve.hh	/^        void operator()(typename traits::base_container_type::traits::rec_type& p) {$/;"	f	struct:ALE::Sieve::changeDepth
operator ()	include/sieve/Sieve.hh	/^        void operator()(typename traits::base_container_type::traits::rec_type& p) {$/;"	f	struct:ALE::Sieve::changeHeight
operator ()	include/sieve/Sieve.hh	/^        void operator()(typename traits::base_container_type::traits::rec_type& p) {$/;"	f	struct:ALE::Sieve::changeMarker
operator ()	include/sieve/Sifter.hh	/^        void operator()(Rec& r) { r.degree = this->_newDegree; }$/;"	f	struct:ALE::SifterDef::Rec::degreeAdjuster
operator ()	include/sieve/Sifter.hh	/^        void operator()(arrow_type& a) { a.target = this->_newTarget;}$/;"	f	struct:ALE::SifterDef::Arrow::targetChanger
operator ()	include/sieve/Sifter.hh	/^        void operator()(arrow_type& a) {a.source = this->_newSource;}$/;"	f	struct:ALE::SifterDef::Arrow::sourceChanger
operator ()	include/sieve/Sifter.hh	/^      void operator()(typename traits::arrow_type& p) const {$/;"	f	struct:ALE::Sifter::ColorSetter
operator ()	src/dm/impls/mesh/examples/tests/subset.cxx	/^  void operator()(const Obj<selection::PointArray>& subset) {$/;"	f	class:Processor
operator *	include/petscsys.hh	/^    inline friend Point operator* (const Point& a, const Point &b) {$/;"	f	struct:PETSc::Point
operator *	include/petscsys.hh	/^    inline friend Point operator* (const Point& a, const double c) {$/;"	f	struct:PETSc::Point
operator *	include/sieve/ALE_containers.hh	/^      virtual const value_type  operator*() const {return _ex(*(this->_itor));};$/;"	f	class:ALE::IndexSequence::iterator
operator *	include/sieve/ALE_mem.hh	/^    X& operator*() const {assertNull(false); return *objPtr;};$/;"	f	class:ALE::Obj
operator *	include/sieve/CartesianSieve.hh	/^        virtual const value_type  operator*() const {return this->_value;};$/;"	f	class:ALE::CartesianSieveDef::ConeSequence::iterator
operator *	include/sieve/CartesianSieve.hh	/^        virtual const value_type  operator*() const {return this->_value;};$/;"	f	class:ALE::CartesianSieveDef::SupportSequence::iterator
operator *	include/sieve/CartesianSieve.hh	/^        virtual const value_type operator*() const {return this->_value;};$/;"	f	class:ALE::CartesianSieveDef::PointSequence::iterator
operator *	include/sieve/Field.hh	/^      value_type operator*() const {return this->_iter->first;};$/;"	f	class:ALE::SetFromMap::const_iterator
operator *	include/sieve/ISieve.hh	/^        virtual const value_type  operator*() const {return this->_data[this->_pos];};$/;"	f	class:ALE::IFSieveDef::Sequence::const_iterator
operator *	include/sieve/ISieve.hh	/^      point_type operator*() const {return this->_p;};$/;"	f	class:ALE::Interval::const_iterator
operator *	include/sieve/LabelSifter.hh	/^        virtual const value_type  operator*() const {return _ex(*(this->_itor));};$/;"	f	class:ALE::NewSifterDef::IndexSequenceTraits::iterator_base
operator *	include/sieve/Overlap.hh	/^    virtual const value_type operator*() const {return *points;};$/;"	f	class:PETSc::DualSequence::iterator
operator *	include/sieve/Sifter.hh	/^        virtual const value_type  operator*() const {return _ex(*(this->_itor));};$/;"	f	class:ALE::SifterDef::IndexSequenceTraits::iterator_base
operator *=	include/petscsys.hh	/^    inline void operator*=(const Point& p) {for(int d = 0; d < dim; ++d) {x[d] *= p.x[d];}}$/;"	f	struct:PETSc::Point
operator *=	include/petscsys.hh	/^    inline void operator*=(const value_type& c) {for(int d = 0; d < dim; ++d) {x[d] *= c;}}$/;"	f	struct:PETSc::Point
operator +	include/petscsys.hh	/^    inline friend Point operator+ (const Point& a, const Point &b) {$/;"	f	struct:PETSc::Point
operator +	include/petscsys.hh	/^    inline friend Point operator+ (const Point& a, const double c) {$/;"	f	struct:PETSc::Point
operator ++	include/sieve/ALE_containers.hh	/^      virtual iterator   operator++() {++this->_itor; return *this;};$/;"	f	class:ALE::IndexSequence::iterator
operator ++	include/sieve/ALE_containers.hh	/^      virtual iterator   operator++(int n) {iterator tmp(*this); ++this->_itor; return tmp;};$/;"	f	class:ALE::IndexSequence::iterator
operator ++	include/sieve/CartesianSieve.hh	/^        virtual iterator          operator++(int n) {$/;"	f	class:ALE::CartesianSieveDef::ConeSequence::iterator
operator ++	include/sieve/CartesianSieve.hh	/^        virtual iterator          operator++(int n) {$/;"	f	class:ALE::CartesianSieveDef::SupportSequence::iterator
operator ++	include/sieve/CartesianSieve.hh	/^        virtual iterator         operator++(int n) {iterator tmp(*this); ++this->_value; return tmp;};$/;"	f	class:ALE::CartesianSieveDef::PointSequence::iterator
operator ++	include/sieve/CartesianSieve.hh	/^        virtual iterator&         operator++() {$/;"	f	class:ALE::CartesianSieveDef::ConeSequence::iterator
operator ++	include/sieve/CartesianSieve.hh	/^        virtual iterator&         operator++() {$/;"	f	class:ALE::CartesianSieveDef::SupportSequence::iterator
operator ++	include/sieve/CartesianSieve.hh	/^        virtual iterator&        operator++() {++this->_value; return *this;};$/;"	f	class:ALE::CartesianSieveDef::PointSequence::iterator
operator ++	include/sieve/Field.hh	/^      const_iterator operator++(int) {$/;"	f	class:ALE::SetFromMap::const_iterator
operator ++	include/sieve/Field.hh	/^      const_iterator& operator++() {++this->_iter; return *this;}$/;"	f	class:ALE::SetFromMap::const_iterator
operator ++	include/sieve/ISieve.hh	/^        virtual const_iterator    operator++(int n) {$/;"	f	class:ALE::IFSieveDef::Sequence::const_iterator
operator ++	include/sieve/ISieve.hh	/^        virtual const_iterator&   operator++() {++this->_pos; return *this;};$/;"	f	class:ALE::IFSieveDef::Sequence::const_iterator
operator ++	include/sieve/ISieve.hh	/^      const_iterator& operator++() {++this->_p; return *this;}$/;"	f	class:ALE::Interval::const_iterator
operator ++	include/sieve/ISieve.hh	/^      const_iterator& operator++(int) {$/;"	f	class:ALE::Interval::const_iterator
operator ++	include/sieve/LabelSifter.hh	/^        virtual iterator   operator++() {++this->_itor; return *this;};$/;"	f	class:ALE::NewSifterDef::IndexSequenceTraits::iterator
operator ++	include/sieve/LabelSifter.hh	/^        virtual iterator   operator++(int n) {iterator tmp(this->_itor); ++this->_itor; return tmp;};$/;"	f	class:ALE::NewSifterDef::IndexSequenceTraits::iterator
operator ++	include/sieve/LabelSifter.hh	/^        virtual reverse_iterator     operator++() {--this->_itor; return *this;};$/;"	f	class:ALE::NewSifterDef::ReversibleIndexSequenceTraits::reverse_iterator
operator ++	include/sieve/LabelSifter.hh	/^        virtual reverse_iterator     operator++(int n) {reverse_iterator tmp(this->_itor); --this->_itor; return tmp;};$/;"	f	class:ALE::NewSifterDef::ReversibleIndexSequenceTraits::reverse_iterator
operator ++	include/sieve/Overlap.hh	/^    virtual iterator         operator++(int) {$/;"	f	class:PETSc::DualSequence::iterator
operator ++	include/sieve/Overlap.hh	/^    virtual iterator&        operator++() {++points; ++remotePoints; return *this;};$/;"	f	class:PETSc::DualSequence::iterator
operator ++	include/sieve/Sifter.hh	/^        virtual iterator   operator++() {++this->_itor; return *this;};$/;"	f	class:ALE::SifterDef::IndexSequenceTraits::iterator
operator ++	include/sieve/Sifter.hh	/^        virtual iterator   operator++(int n) {iterator tmp(this->_itor); ++this->_itor; return tmp;};$/;"	f	class:ALE::SifterDef::IndexSequenceTraits::iterator
operator ++	include/sieve/Sifter.hh	/^        virtual reverse_iterator     operator++() {--this->_itor; return *this;};$/;"	f	class:ALE::SifterDef::ReversibleIndexSequenceTraits::reverse_iterator
operator ++	include/sieve/Sifter.hh	/^        virtual reverse_iterator     operator++(int n) {reverse_iterator tmp(this->_itor); --this->_itor; return tmp;};$/;"	f	class:ALE::SifterDef::ReversibleIndexSequenceTraits::reverse_iterator
operator +=	include/petscsys.hh	/^    inline void operator+=(const Point& p) {for(int d = 0; d < dim; ++d) {x[d] += p.x[d];}}$/;"	f	struct:PETSc::Point
operator +=	include/petscsys.hh	/^    inline void operator+=(const value_type& c) {for(int d = 0; d < dim; ++d) {x[d] += c;}}$/;"	f	struct:PETSc::Point
operator +=	include/sieve/ALE_containers.hh	/^    void operator+=(const Pair& q) {$/;"	f	class:ALE::Pair
operator +=	include/sieve/ALE_containers.hh	/^    void operator+=(const Point& q) {$/;"	f	class:ALE::Point
operator -	include/petscsys.hh	/^    inline Point& operator-() {$/;"	f	struct:PETSc::Point
operator -	include/petscsys.hh	/^    inline friend Point operator- (const Point& a, const Point &b) {$/;"	f	struct:PETSc::Point
operator --	include/sieve/Field.hh	/^      const_iterator operator--(int) {$/;"	f	class:ALE::SetFromMap::const_iterator
operator --	include/sieve/Field.hh	/^      const_iterator& operator--() {--this->_iter; return *this;}$/;"	f	class:ALE::SetFromMap::const_iterator
operator --	include/sieve/ISieve.hh	/^      const_iterator& operator--() {--this->_p; return *this;}$/;"	f	class:ALE::Interval::const_iterator
operator --	include/sieve/ISieve.hh	/^      const_iterator& operator--(int) {$/;"	f	class:ALE::Interval::const_iterator
operator -=	include/petscsys.hh	/^    inline void operator-=(const Point& p) {for(int d = 0; d < dim; ++d) {x[d] -= p.x[d];}}$/;"	f	struct:PETSc::Point
operator -=	include/petscsys.hh	/^    inline void operator-=(const value_type& c) {for(int d = 0; d < dim; ++d) {x[d] -= c;}}$/;"	f	struct:PETSc::Point
operator ->	include/sieve/ALE_mem.hh	/^    X*   operator->() const {return objPtr;};$/;"	f	class:ALE::Obj
operator /	include/petscsys.hh	/^    inline friend Point operator\/ (const Point& a, const Point &b) {$/;"	f	struct:PETSc::Point
operator /=	include/petscsys.hh	/^    inline void operator\/=(const Point& p) {for(int d = 0; d < dim; ++d) {x[d] \/= p.x[d];}}$/;"	f	struct:PETSc::Point
operator /=	include/petscsys.hh	/^    inline void operator\/=(const value_type& c) {for(int d = 0; d < dim; ++d) {x[d] \/= c;}}$/;"	f	struct:PETSc::Point
operator <	include/sieve/ALE_containers.hh	/^    bool operator<(const MinimalArrow& q) const {$/;"	f	struct:ALE::MinimalArrow
operator <	include/sieve/ALE_containers.hh	/^    bool operator<(const Pair& q) const {$/;"	f	class:ALE::Pair
operator <	include/sieve/ALE_containers.hh	/^    bool operator<(const Point& q) const {$/;"	f	class:ALE::Point
operator <	include/sieve/ISieve.hh	/^    friend bool operator<(const SimpleArrow& x, const SimpleArrow& y) {$/;"	f	struct:ALE::SimpleArrow
operator <	include/sieve/Mesh.hh	/^    operator<(const indexSet& __x) {$/;"	f	class:ALE::indexSet
operator <	include/sieve/Mesh.hh	/^  operator<(const indexSet& __x, const indexSet& __y) {$/;"	f	namespace:ALE
operator <<	include/petscsys.hh	/^    Exception& operator<<(const Input& in) {$/;"	f	class:PETSc::Exception
operator <<	include/petscsys.hh	/^    friend Stream& operator<<(Stream& os, const Exception& e) {$/;"	f	class:PETSc::Exception
operator <<	include/petscsys.hh	/^    friend std::ostream& operator<<(std::ostream& stream, const Point& p) {$/;"	f	struct:PETSc::Point
operator <<	include/sieve/ALE_args.hh	/^    friend std::ostream& operator<<(std::ostream& os, const ArgDB& argDB) {$/;"	f	class:ALE::ArgDB
operator <<	include/sieve/ALE_containers.hh	/^    friend Stream_& operator<<(Stream_& os, const Arrow& a) {$/;"	f	struct:ALE::Arrow
operator <<	include/sieve/ALE_containers.hh	/^    friend std::ostream& operator<<(std::ostream& os, const MinimalArrow& a) {$/;"	f	struct:ALE::MinimalArrow
operator <<	include/sieve/ALE_containers.hh	/^    friend std::ostream& operator<<(std::ostream& os, const Pair& p) {$/;"	f	class:ALE::Pair
operator <<	include/sieve/ALE_containers.hh	/^    friend std::ostream& operator<<(std::ostream& os, const Point& p) {$/;"	f	class:ALE::Point
operator <<	include/sieve/ALE_containers.hh	/^    friend std::ostream& operator<<(std::ostream& os, const pair& p) {$/;"	f	struct:ALE::pair
operator <<	include/sieve/ALE_exception.hh	/^    XException& operator<<(const Input_& in) {$/;"	f	class:ALE::XException
operator <<	include/sieve/ALE_exception.hh	/^    friend Stream_& operator<<(Stream_& os, const Exception& e) {$/;"	f	class:ALE::Exception
operator <<	include/sieve/ALE_exception.hh	/^    friend Stream_& operator<<(Stream_& os, const XException& e) {$/;"	f	class:ALE::XException
operator <<	include/sieve/ISieve.hh	/^    friend std::ostream& operator<<(std::ostream& os, const SimpleArrow& a) {$/;"	f	struct:ALE::SimpleArrow
operator <<	include/sieve/ISieve.hh	/^    friend std::ostream& operator<<(std::ostream& stream, const Interval& interval) {$/;"	f	class:ALE::Interval
operator <<	include/sieve/ISieve.hh	/^    friend std::ostream& operator<<(std::ostream& stream, const OrientedPoint& point) {$/;"	f	class:ALE::OrientedPoint
operator <<	include/sieve/LabelSifter.hh	/^      friend std::ostream& operator<<(std::ostream& os, const Arrow& a) {$/;"	f	struct:ALE::NewSifterDef::Arrow
operator <<	include/sieve/Sieve.hh	/^      friend std::ostream& operator<<(std::ostream& os, Obj<Sieve<Point_,Marker_,Color_> > s) {$/;"	f	class:ALE::Sieve
operator <<	include/sieve/Sieve.hh	/^      friend std::ostream& operator<<(std::ostream& os, Sieve<Point_,Marker_,Color_>& s) {$/;"	f	class:ALE::Sieve
operator <<	include/sieve/Sieve.hh	/^      friend std::ostream& operator<<(std::ostream& os, const Rec& p) {$/;"	f	struct:ALE::SieveDef::Rec
operator <<	include/sieve/Sifter.hh	/^      friend std::ostream& operator<<(std::ostream& os, const Arrow& a) {$/;"	f	struct:ALE::SifterDef::Arrow
operator <<	include/sieve/Sifter.hh	/^      friend std::ostream& operator<<(std::ostream& os, const Rec& p) {$/;"	f	struct:ALE::SifterDef::Rec
operator <<	src/dm/impls/mesh/examples/tests/refinementTest.cxx	/^  friend std::ostream& operator<<(std::ostream& stream, const Edge& edge) {$/;"	f	class:Edge
operator <=	include/sieve/Mesh.hh	/^  operator<=(const indexSet& __x, const indexSet& __y) {$/;"	f	namespace:ALE
operator =	include/petscsys.hh	/^    inline void operator=(const Point& p) {for(int d = 0; d < dim; ++d) {x[d] = p.x[d];}}$/;"	f	struct:PETSc::Point
operator =	include/petscsys.hh	/^    inline void operator=(value_type v) {for(int d = 0; d < dim; ++d) {x[d] = v;}}$/;"	f	struct:PETSc::Point
operator =	include/sieve/ALE_mem.hh	/^  Obj<X,A>& Obj<X,A>::operator=(const Obj<X,A>& obj) {$/;"	f	class:ALE::Obj
operator =	include/sieve/ALE_mem.hh	/^  Obj<X,A>& Obj<X,A>::operator=(const Obj<Y>& obj) {$/;"	f	class:ALE::Obj
operator =	include/sieve/Field.hh	/^      const_iterator& operator=(const const_iterator& iter) {this->_iter = iter._iter; return this->_iter;};$/;"	f	class:ALE::SetFromMap::const_iterator
operator =	include/sieve/ISieve.hh	/^      const_iterator& operator=(const const_iterator& iter) {this->_p = iter._p; return *this;};$/;"	f	class:ALE::Interval::const_iterator
operator =	include/sieve/ISieve.hh	/^      void operator=(const NConeRetriever& ncr) {$/;"	f	class:ALE::ISieveVisitor::NConeRetriever
operator =	include/sieve/ISieve.hh	/^      void operator=(const PointRetriever& pr) {$/;"	f	class:ALE::ISieveVisitor::PointRetriever
operator =	include/sieve/ISieve.hh	/^    Interval& operator=(const Interval& interval) {_min = interval.min(); _max = interval.max(); return *this;}$/;"	f	class:ALE::Interval
operator =	include/sieve/Overlap.hh	/^    iterator& operator=(const iterator& iter) {$/;"	f	class:PETSc::DualSequence::iterator
operator ==	include/petscsys.hh	/^    inline bool operator==(const Point& p) {for(int d = 0; d < dim; ++d) {if (x[d] != p.x[d]) return false;} return true;}$/;"	f	struct:PETSc::Point
operator ==	include/sieve/ALE_containers.hh	/^      virtual bool              operator==(const iterator& iter) const {return this->_itor == iter._itor;};$/;"	f	class:ALE::IndexSequence::iterator
operator ==	include/sieve/ALE_containers.hh	/^    bool operator==(const MinimalArrow& q) const {$/;"	f	struct:ALE::MinimalArrow
operator ==	include/sieve/ALE_containers.hh	/^    bool operator==(const Pair& q) const {$/;"	f	class:ALE::Pair
operator ==	include/sieve/ALE_containers.hh	/^    bool operator==(const Point& q) const {$/;"	f	class:ALE::Point
operator ==	include/sieve/ALE_mem.hh	/^    bool operator==(const Obj& obj) { return (this->objPtr == obj.objPtr);};$/;"	f	class:ALE::Obj
operator ==	include/sieve/ALE_mem.hh	/^  inline bool operator==(const malloc_allocator<T>&, const malloc_allocator<T>&) {$/;"	f	namespace:ALE
operator ==	include/sieve/CartesianSieve.hh	/^        virtual bool              operator==(const iterator& iter) const {return this->_pos == iter._pos;};$/;"	f	class:ALE::CartesianSieveDef::ConeSequence::iterator
operator ==	include/sieve/CartesianSieve.hh	/^        virtual bool              operator==(const iterator& iter) const {return this->_pos == iter._pos;};$/;"	f	class:ALE::CartesianSieveDef::SupportSequence::iterator
operator ==	include/sieve/CartesianSieve.hh	/^        virtual bool             operator==(const iterator& iter) const {return this->_value == iter._value;};$/;"	f	class:ALE::CartesianSieveDef::PointSequence::iterator
operator ==	include/sieve/Field.hh	/^      bool operator==(const const_iterator& iter) const {return this->_iter == iter._iter;};$/;"	f	class:ALE::SetFromMap::const_iterator
operator ==	include/sieve/ISieve.hh	/^        virtual bool              operator==(const const_iterator& iter) const {return this->_pos == iter._pos;};$/;"	f	class:ALE::IFSieveDef::Sequence::const_iterator
operator ==	include/sieve/ISieve.hh	/^      bool operator==(const const_iterator& iter) const {return this->_p == iter._p;};$/;"	f	class:ALE::Interval::const_iterator
operator ==	include/sieve/LabelSifter.hh	/^        virtual bool              operator==(const iterator_base& iter) const {return this->_itor == iter._itor;};$/;"	f	class:ALE::NewSifterDef::IndexSequenceTraits::iterator_base
operator ==	include/sieve/Mesh.hh	/^  operator==(const indexSet& __x, const indexSet& __y) {$/;"	f	namespace:ALE
operator ==	include/sieve/Overlap.hh	/^    virtual bool             operator==(const iterator& iter) const {return points == iter.points;};$/;"	f	class:PETSc::DualSequence::iterator
operator ==	include/sieve/Sifter.hh	/^        virtual bool              operator==(const iterator_base& iter) const {return this->_itor == iter._itor;};$/;"	f	class:ALE::SifterDef::IndexSequenceTraits::iterator_base
operator >>	include/sieve/ALE_containers.hh	/^    friend std::istream& operator>>(std::istream& is, Point& p) {$/;"	f	class:ALE::Point
operator Obj<Y> const	include/sieve/ALE_mem.hh	/^  Obj<X,A>::operator Obj<Y> const() {$/;"	f	class:ALE::Obj
operator T&	include/sieve/ALE_args.hh	/^    operator T& () {$/;"	f	struct:ALE::ArgValue
operator X	include/sieve/ALE_mem.hh	/^    operator X()  {assertNull(false); return *objPtr;};$/;"	f	class:ALE::Obj
operator X*	include/sieve/ALE_mem.hh	/^    operator X*() {return objPtr;};$/;"	f	class:ALE::Obj
operator []	include/petscsys.hh	/^    inline value_type operator[](const int i) const {return this->x[i];};$/;"	f	struct:PETSc::Point
operator []	include/petscsys.hh	/^    inline value_type& operator[](const int i) {return this->x[i];};$/;"	f	struct:PETSc::Point
operator []	include/sieve/ALE_args.hh	/^    ArgValue operator[](const string& str) const {return super::operator[](str);};$/;"	f	class:ALE::ArgDB
operator const T&	include/sieve/ALE_args.hh	/^    operator const T&() {$/;"	f	struct:ALE::ArgValue
operator value_semantic_ptr	include/sieve/ALE_args.hh	/^    virtual operator value_semantic_ptr() const {$/;"	f	struct:ALE::Arg
operator value_type *	include/petscsys.hh	/^    inline operator value_type *() {return x;};$/;"	f	struct:PETSc::Point
operatorsctx	include/petsc-private/kspimpl.h	/^  void *operatorsctx;$/;"	m	struct:_p_DMKSP
oppositeVertex	include/sieve/Selection.hh	/^      int             oppositeVertex;$/;"	m	class:ALE::Selection::FaceVisitor
ops	include/petsc-private/threadcommimpl.h	/^  PetscThreadCommOps      ops;          \/* Operations table *\/$/;"	m	struct:_p_PetscThreadComm
opt	config/BuildSystem/patch.py	/^  opt = OptionParser(usage="1. %prog [options] unified.diff\\n"$/;"	v	class:PatchSet
option	include/petscoptions.h	/^  char              *option;$/;"	m	struct:_n_PetscOptions
optionctx	include/petsc-private/petscimpl.h	/^  void                 *optionctx[PETSC_MAX_OPTIONS_HANDLER];$/;"	m	struct:_p_PetscObject
optiondestroy	include/petsc-private/petscimpl.h	/^  PetscErrorCode       (*optiondestroy[PETSC_MAX_OPTIONS_HANDLER])(PetscObject,void*);$/;"	m	struct:_p_PetscObject
optionhandler	include/petsc-private/petscimpl.h	/^  PetscErrorCode       (*optionhandler[PETSC_MAX_OPTIONS_HANDLER])(PetscObject,void*);$/;"	m	struct:_p_PetscObject
options	bin/TOPSInstaller.py	/^        options = []$/;"	v
options	include/finclude/petscmat.h	/^!  Matrix options; must match those in include\/petscmat.h$/;"	v
optionsprinted	include/petsc-private/petscimpl.h	/^  PetscBool            optionsprinted;$/;"	m	struct:_p_PetscObject
optparse	config/cmakegen.py	/^  import optparse$/;"	i
order	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^  order      = int(sys.argv[n*5+2])$/;"	v
order	bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py	/^  order      = int(sys.argv[n*5+2])$/;"	v
order	include/petsc-private/linesearchimpl.h	/^  PetscInt            order;$/;"	m	struct:_p_LineSearch
order	include/petsc-private/tsimpl.h	/^    PetscInt   order[16];        \/* classical order of each scheme *\/$/;"	m	struct:_p_TSAdapt::__anon8
order	include/sieve/ISieve.hh	/^      Order&              order;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
order	include/sieve/ISieve.hh	/^      Order&         order;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
order	src/dm/impls/plex/examples/tests/ex3.c	/^  PetscInt order;                  \/* Order of polynomials to test *\/$/;"	m	struct:__anon3	file:
orderPatch	include/sieve/Numbering.hh	/^    void orderPatch(const Obj<Section_>& section, const Obj<sieve_type>& sieve, const Obj<send_overlap_type>& sendOverlap = NULL, const value_type offset = 0, const value_type bcOffset = -2) {$/;"	f	class:ALE::NumberingFactory
orderPoint	include/sieve/Numbering.hh	/^    void orderPoint(const Obj<Section_>& section, const Obj<sieve_type>& sieve, const typename Section_::point_type& point, value_type& offset, value_type& bcOffset, const Obj<send_overlap_type>& sendOverlap = NULL) {$/;"	f	class:ALE::NumberingFactory
orderPointNew	include/sieve/Numbering.hh	/^    void orderPointNew(const Obj<Section_>& section, const Obj<sieve_type>& sieve, const typename Section_::point_type& point, value_type& offset, value_type& bcOffset, const Obj<send_overlap_type>& sendOverlap = NULL) {$/;"	f	class:ALE::NumberingFactory
orderPoints	include/sieve/Field.hh	/^    void orderPoints(const Obj<atlas_type>& atlas){$/;"	f	class:ALE::FEMSection
orderPoints	include/sieve/Field.hh	/^    void orderPoints(const Obj<atlas_type>& atlas){$/;"	f	class:ALE::GeneralSection
orderPoints	include/sieve/Field.hh	/^    void orderPoints(const Obj<atlas_type>& atlas){$/;"	f	class:ALE::Section
order_type	include/sieve/INumbering.hh	/^    typedef IGlobalOrder<point_type, oValue_type, oAlloc_type>                                   order_type;$/;"	t	class:ALE::INumberingFactory
order_type	include/sieve/Mesh.hh	/^    typedef typename MeshNumberingFactory::order_type                 order_type;$/;"	t	class:ALE::Bundle
order_type	include/sieve/Mesh.hh	/^    typedef typename MeshNumberingFactory::order_type                 order_type;$/;"	t	class:ALE::IBundle
order_type	include/sieve/Mesh.hh	/^    typedef typename base_type::order_type            order_type;$/;"	t	class:ALE::IMesh
order_type	include/sieve/Mesh.hh	/^    typedef typename base_type::order_type            order_type;$/;"	t	class:ALE::Mesh
order_type	include/sieve/Numbering.hh	/^    typedef GlobalOrder<point_type>                         order_type;$/;"	t	class:ALE::NumberingFactory
orders_type	include/sieve/INumbering.hh	/^    typedef std::map<bundle_type*, std::map<std::string, Obj<order_type> > >                     orders_type;$/;"	t	class:ALE::INumberingFactory
orders_type	include/sieve/Numbering.hh	/^    typedef std::map<bundle_type*, std::map<std::string, Obj<order_type> > > orders_type;$/;"	t	class:ALE::NumberingFactory
orientCones	include/sieve/ISieve.hh	/^    bool                 orientCones;$/;"	m	class:ALE::IFSieve
orientations_type	include/sieve/ISieve.hh	/^    typedef int        *orientations_type;$/;"	t	class:ALE::IFSieve
orientedArrowArray	include/sieve/SieveAlgorithms.hh	/^    typedef ALE::array<oriented_arrow_type>          orientedArrowArray;$/;"	t	class:ALE::SieveAlg
orientedClosure	include/sieve/ISieve.hh	/^    static void orientedClosure(const Sieve& sieve, const point_type& p, Visitor& v) {$/;"	f	class:ALE::ISieveTraversal
orientedClosure	include/sieve/SieveAlgorithms.hh	/^    static Obj<orientedConeArray> orientedClosure(const Obj<bundle_type>& bundle, const point_type& p) {$/;"	f	class:ALE::SieveAlg
orientedClosure	include/sieve/SieveAlgorithms.hh	/^    static Obj<orientedConeArray> orientedClosure(const bundle_type *bundle, const Obj<arrow_section_type>& orientation, const point_type& p) {$/;"	f	class:ALE::SieveAlg
orientedCone	include/sieve/ISieve.hh	/^    void orientedCone(const point_type& p, Visitor& v) const {$/;"	f	class:ALE::IFSieve
orientedConeArray	include/sieve/SieveAlgorithms.hh	/^    typedef ALE::array<oriented_point_type>          orientedConeArray;$/;"	t	class:ALE::SieveAlg
orientedCones	include/sieve/ISieve.hh	/^    bool orientedCones() const {return this->orientCones;};$/;"	f	class:ALE::IFSieve
orientedReverseCone	include/sieve/ISieve.hh	/^    void orientedReverseCone(const point_type& p, Visitor& v) const {$/;"	f	class:ALE::IFSieve
orientedReverseSupport	include/sieve/ISieve.hh	/^    void orientedReverseSupport(const point_type& p, Visitor& v) const {$/;"	f	class:ALE::IFSieve
orientedStar	include/sieve/ISieve.hh	/^    static void orientedStar(const Sieve& sieve, const point_type& p, Visitor& v) {$/;"	f	class:ALE::ISieveTraversal
orientedSupport	include/sieve/ISieve.hh	/^    void orientedSupport(const point_type& p, Visitor& v) const {$/;"	f	class:ALE::IFSieve
oriented_arrow_type	include/sieve/ISieve.hh	/^      typedef std::pair<arrow_type,int>  oriented_arrow_type;$/;"	t	class:ALE::ISieveVisitor::ArrowRetriever
oriented_arrow_type	include/sieve/SieveAlgorithms.hh	/^    typedef std::pair<arrow_type, int>               oriented_arrow_type;$/;"	t	class:ALE::SieveAlg
oriented_cones_type	include/sieve/Distribution.hh	/^    typedef ALE::Section<ALE::Pair<int, point_type>, oriented_point_type> oriented_cones_type;$/;"	t	class:ALE::DistributionNew
oriented_point_type	include/sieve/Distribution.hh	/^    typedef OrientedPoint<point_type>                     oriented_point_type;$/;"	t	class:ALE::DistributionNew
oriented_point_type	include/sieve/ISieve.hh	/^      typedef std::pair<point_type,int>  oriented_point_type;$/;"	t	class:ALE::ISieveVisitor::FilteredPointRetriever
oriented_point_type	include/sieve/ISieve.hh	/^      typedef std::pair<point_type,int>  oriented_point_type;$/;"	t	class:ALE::ISieveVisitor::PointRetriever
oriented_point_type	include/sieve/ISieve.hh	/^      typedef typename base_type::oriented_point_type oriented_point_type;$/;"	t	class:ALE::ISieveVisitor::MeshNConeRetriever
oriented_point_type	include/sieve/ISieve.hh	/^      typedef typename base_type::oriented_point_type oriented_point_type;$/;"	t	class:ALE::ISieveVisitor::NConeRetriever
oriented_point_type	include/sieve/SieveAlgorithms.hh	/^    typedef std::pair<point_type, int>               oriented_point_type;$/;"	t	class:ALE::SieveAlg
origVertices	include/sieve/Selection.hh	/^      PointArray            *origVertices;$/;"	m	class:ALE::Selection::FaceInserterV
origVertices	include/sieve/Selection.hh	/^      PointArray           *origVertices;$/;"	m	class:ALE::Selection::FaceInserter
origVertices	include/sieve/Selection.hh	/^      PointArray&     origVertices;$/;"	m	class:ALE::Selection::FaceVisitor
originalMax	include/sieve/ParallelMapping.hh	/^    point_type       originalMax;$/;"	m	class:ALE::PointFactory
originaldm	include/petsc-private/kspimpl.h	/^  DM originaldm;$/;"	m	struct:_p_DMKSP
originaldm	include/petsc-private/snesimpl.h	/^  DM originaldm;$/;"	m	struct:_p_DMSNES
originaldm	include/petsc-private/tsimpl.h	/^  DM originaldm;$/;"	m	struct:_p_DMTS
os	bin/TOPSGenerator.py	/^        import os.path$/;"	i
os	bin/TOPSInstaller.py	/^        import os.path$/;"	i
os	bin/adiforfix.py	/^import os$/;"	i
os	bin/configVars.py	/^    import os$/;"	i
os	bin/configVars.py	/^import os, sys$/;"	i
os	bin/petscnagupgrade.py	/^import os$/;"	i
os	bin/petscnagupgrade.py	/^import os.path, time,sys$/;"	i
os	bin/portabilitycheck.py	/^import os$/;"	i
os	bin/pythonscripts/PetscBinaryIO_tests.py	/^import os$/;"	i
os	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^import os, sys$/;"	i
os	bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py	/^import os, sys$/;"	i
os	bin/pythonscripts/PetscStaticFunctionCandidates.py	/^import os$/;"	i
os	bin/pythonscripts/petsc_conf.py	/^    import sys, os$/;"	i
os	bin/taucc.py	/^import os$/;"	i
os	bin/update.py	/^import os$/;"	i
os	bin/urlget.py	/^import os$/;"	i
os	config/BuildSystem/RDict.py	/^import os$/;"	i
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os	config/BuildSystem/build/bk.py	/^      import os$/;"	i
os	config/BuildSystem/build/bk.py	/^    import os$/;"	i
os	config/BuildSystem/build/compile/SIDL.py	/^import os$/;"	i
os	config/BuildSystem/build/fileState.py	/^import os$/;"	i
os	config/BuildSystem/build/fileset.py	/^import os$/;"	i
os	config/BuildSystem/build/framework.py	/^import os$/;"	i
os	config/BuildSystem/build/processor.py	/^import os$/;"	i
os	config/BuildSystem/build/templates/Compile.py	/^    import os$/;"	i
os	config/BuildSystem/build/templates/SIDL.py	/^    import os$/;"	i
os	config/BuildSystem/build/templates/usingC.py	/^import os$/;"	i
os	config/BuildSystem/build/templates/usingCxx.py	/^import os$/;"	i
os	config/BuildSystem/build/templates/usingPython.py	/^import os$/;"	i
os	config/BuildSystem/build/templates/usingSIDL.py	/^import os$/;"	i
os	config/BuildSystem/build/transform.py	/^      import os$/;"	i
os	config/BuildSystem/checkdlllibs.py	/^import os$/;"	i
os	config/BuildSystem/config/ase.py	/^import os$/;"	i
os	config/BuildSystem/config/atomics.py	/^import os$/;"	i
os	config/BuildSystem/config/base.py	/^import os$/;"	i
os	config/BuildSystem/config/compile/C.py	/^    import os$/;"	i
os	config/BuildSystem/config/compile/C.py	/^import os$/;"	i
os	config/BuildSystem/config/compile/CUDA.py	/^    import os$/;"	i
os	config/BuildSystem/config/compile/CUDA.py	/^import os$/;"	i
os	config/BuildSystem/config/compile/Cxx.py	/^    import os$/;"	i
os	config/BuildSystem/config/compile/Cxx.py	/^import os$/;"	i
os	config/BuildSystem/config/compile/FC.py	/^import os$/;"	i
os	config/BuildSystem/config/compile/SIDL.py	/^    import os$/;"	i
os	config/BuildSystem/config/compilerFlags.py	/^import os$/;"	i
os	config/BuildSystem/config/compilerOptions.py	/^import os$/;"	i
os	config/BuildSystem/config/compilers.py	/^import os$/;"	i
os	config/BuildSystem/config/framework.py	/^import os$/;"	i
os	config/BuildSystem/config/functions.py	/^import os.path$/;"	i
os	config/BuildSystem/config/libraries.py	/^import os$/;"	i
os	config/BuildSystem/config/package.py	/^import os$/;"	i
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os	config/BuildSystem/config/packages/CHOLMOD.py	/^import os$/;"	i
os	config/BuildSystem/config/packages/MPI.py	/^import os$/;"	i
os	config/BuildSystem/config/packages/PETSc.py	/^import os$/;"	i
os	config/BuildSystem/config/packages/UMFPACK.py	/^import os$/;"	i
os	config/BuildSystem/config/packages/boost.py	/^    import os$/;"	i
os	config/BuildSystem/config/packages/cusp.py	/^    import os$/;"	i
os	config/BuildSystem/config/packages/exodusii.py	/^    import os$/;"	i
os	config/BuildSystem/config/packages/exodusii.py	/^import os$/;"	i
os	config/BuildSystem/config/packages/f2cblaslapack.py	/^    import os$/;"	i
os	config/BuildSystem/config/packages/fiat.py	/^import os, sys$/;"	i
os	config/BuildSystem/config/packages/hdf5.py	/^    import os$/;"	i
os	config/BuildSystem/config/packages/hdf5.py	/^import os$/;"	i
os	config/BuildSystem/config/packages/netcdf-cxx.py	/^import os$/;"	i
os	config/BuildSystem/config/packages/netcdf.py	/^import os$/;"	i
os	config/BuildSystem/config/packages/scientificpython.py	/^import os, sys$/;"	i
os	config/BuildSystem/config/packages/thrust.py	/^    import os$/;"	i
os	config/BuildSystem/config/preTests.py	/^import os, sys$/;"	i
os	config/BuildSystem/config/programs.py	/^        import os$/;"	i
os	config/BuildSystem/config/programs.py	/^      import os$/;"	i
os	config/BuildSystem/config/programs.py	/^import os$/;"	i
os	config/BuildSystem/config/python.py	/^import os$/;"	i
os	config/BuildSystem/config/regression/frameworkTest.py	/^import os$/;"	i
os	config/BuildSystem/config/setCompilers.py	/^          import os$/;"	i
os	config/BuildSystem/config/setCompilers.py	/^        import os$/;"	i
os	config/BuildSystem/config/setCompilers.py	/^    import os$/;"	i
os	config/BuildSystem/config/setCompilers.py	/^import os$/;"	i
os	config/BuildSystem/config/sourceControl.py	/^import os$/;"	i
os	config/BuildSystem/config/types.py	/^import os$/;"	i
os	config/BuildSystem/emacsclient.py	/^import os$/;"	i
os	config/BuildSystem/getsplicers.py	/^import os$/;"	i
os	config/BuildSystem/logger.py	/^              import os$/;"	i
os	config/BuildSystem/logger.py	/^      import os$/;"	i
os	config/BuildSystem/logger.py	/^    import os$/;"	i
os	config/BuildSystem/logger.py	/^import os$/;"	i
os	config/BuildSystem/make.py	/^import os$/;"	i
os	config/BuildSystem/maker.py	/^import os$/;"	i
os	config/BuildSystem/nargs.py	/^    import os$/;"	i
os	config/BuildSystem/patch.py	/^import os$/;"	i
os	config/BuildSystem/project.py	/^    import os$/;"	i
os	config/BuildSystem/project.py	/^import os$/;"	i
os	config/BuildSystem/pythonpath.py	/^import os$/;"	i
os	config/BuildSystem/regression/buildtest.py	/^import os$/;"	i
os	config/BuildSystem/retrieval.py	/^import os$/;"	i
os	config/BuildSystem/script.py	/^        import os$/;"	i
os	config/BuildSystem/script.py	/^      import select, os$/;"	i
os	config/BuildSystem/setsplicers.py	/^import os$/;"	i
os	config/BuildSystem/sidldllpath.py	/^import os$/;"	i
os	config/BuildSystem/sourceDatabase.py	/^import os$/;"	i
os	config/BuildSystem/urlMappingInstalled.py	/^  import os$/;"	i
os	config/BuildSystem/urlMappingLocal.py	/^  import os$/;"	i
os	config/PETSc/Configure.py	/^    f.write('  import os\\n')$/;"	i
os	config/PETSc/Configure.py	/^import os$/;"	i
os	config/PETSc/FEM.py	/^    import os$/;"	i
os	config/PETSc/FEM.py	/^    import sys, os$/;"	i
os	config/PETSc/package.py	/^import os$/;"	i
os	config/PETSc/packages/Chaco.py	/^    import os$/;"	i
os	config/PETSc/packages/Generator.py	/^    import os$/;"	i
os	config/PETSc/packages/MUMPS.py	/^    import os$/;"	i
os	config/PETSc/packages/Matlab.py	/^import os$/;"	i
os	config/PETSc/packages/MatlabEngine.py	/^import os$/;"	i
os	config/PETSc/packages/Numpy.py	/^    import os, sys$/;"	i
os	config/PETSc/packages/P3Dlib.py	/^    import os$/;"	i
os	config/PETSc/packages/PARTY.py	/^    import os$/;"	i
os	config/PETSc/packages/PTScotch.py	/^    import os$/;"	i
os	config/PETSc/packages/PaStiX.py	/^    import os$/;"	i
os	config/PETSc/packages/Sieve.py	/^    import os$/;"	i
os	config/PETSc/packages/Suggar.py	/^    import os$/;"	i
os	config/PETSc/packages/SuperLU.py	/^    import os$/;"	i
os	config/PETSc/packages/SuperLU_DIST.py	/^    import os$/;"	i
os	config/PETSc/packages/Triangle.py	/^    import os, sys$/;"	i
os	config/PETSc/packages/Triangle.py	/^import os$/;"	i
os	config/PETSc/packages/X.py	/^import os$/;"	i
os	config/PETSc/packages/Zoltan.py	/^    import os$/;"	i
os	config/PETSc/packages/afterimage.py	/^    import os$/;"	i
os	config/PETSc/packages/ams.py	/^    import os$/;"	i
os	config/PETSc/packages/ams.py	/^import os$/;"	i
os	config/PETSc/packages/babel.py	/^    import os$/;"	i
os	config/PETSc/packages/c2html.py	/^    import os$/;"	i
os	config/PETSc/packages/ccafe.py	/^import os$/;"	i
os	config/PETSc/packages/clique.py	/^    import os$/;"	i
os	config/PETSc/packages/cmake.py	/^    import os$/;"	i
os	config/PETSc/packages/cproto.py	/^    import os$/;"	i
os	config/PETSc/packages/ctetgen.py	/^    import os$/;"	i
os	config/PETSc/packages/cuda.py	/^    import os$/;"	i
os	config/PETSc/packages/cuda.py	/^import os$/;"	i
os	config/PETSc/packages/elemental.py	/^    import os$/;"	i
os	config/PETSc/packages/expat.py	/^    import os$/;"	i
os	config/PETSc/packages/fftw.py	/^    import os$/;"	i
os	config/PETSc/packages/glut.py	/^import os$/;"	i
os	config/PETSc/packages/hwloc.py	/^    import os$/;"	i
os	config/PETSc/packages/hypre.py	/^    import os$/;"	i
os	config/PETSc/packages/java.py	/^import os$/;"	i
os	config/PETSc/packages/lgrind.py	/^    import os$/;"	i
os	config/PETSc/packages/metis.py	/^    import os$/;"	i
os	config/PETSc/packages/ml.py	/^    import os$/;"	i
os	config/PETSc/packages/mpe.py	/^    import os$/;"	i
os	config/PETSc/packages/mpi4py.py	/^    import os$/;"	i
os	config/PETSc/packages/opengl.py	/^import os$/;"	i
os	config/PETSc/packages/openmp.py	/^import os$/;"	i
os	config/PETSc/packages/oski.py	/^    import os$/;"	i
os	config/PETSc/packages/pARMS.py	/^    import os$/;"	i
os	config/PETSc/packages/parmetis.py	/^    import os$/;"	i
os	config/PETSc/packages/pcbddc.py	/^import os$/;"	i
os	config/PETSc/packages/petsc4py.py	/^      import os$/;"	i
os	config/PETSc/packages/petsc4py.py	/^    import os$/;"	i
os	config/PETSc/packages/pthread.py	/^import os$/;"	i
os	config/PETSc/packages/pthreadclasses.py	/^import os$/;"	i
os	config/PETSc/packages/scalapack.py	/^    import os$/;"	i
os	config/PETSc/packages/server.py	/^import os$/;"	i
os	config/PETSc/packages/sowing.py	/^          import os,sys$/;"	i
os	config/PETSc/packages/sowing.py	/^    import os$/;"	i
os	config/PETSc/packages/spai.py	/^    import os$/;"	i
os	config/PETSc/packages/sprng.py	/^    import os$/;"	i
os	config/PETSc/packages/sundials.py	/^    import os$/;"	i
os	config/PETSc/packages/tetgen.py	/^    import os, sys$/;"	i
os	config/PETSc/packages/threadcomm.py	/^import os$/;"	i
os	config/PETSc/packages/txpetscgpu.py	/^    import os$/;"	i
os	config/PETSc/packages/valgrind.py	/^import os$/;"	i
os	config/PETSc/packages/yaml.py	/^    import os$/;"	i
os	config/PETSc/petsc.py	/^import os$/;"	i
os	config/PETSc/utilities/Etags.py	/^import os$/;"	i
os	config/PETSc/utilities/Regression.py	/^import os$/;"	i
os	config/PETSc/utilities/arch.py	/^import os$/;"	i
os	config/PETSc/utilities/bmakeDir.py	/^import os$/;"	i
os	config/PETSc/utilities/cacheDetails.py	/^import os$/;"	i
os	config/PETSc/utilities/dataFilesPath.py	/^import os$/;"	i
os	config/PETSc/utilities/debuggers.py	/^import os$/;"	i
os	config/PETSc/utilities/getResidentSetSize.py	/^import os$/;"	i
os	config/PETSc/utilities/libraryOptions.py	/^import os$/;"	i
os	config/PETSc/utilities/petscdir.py	/^import os$/;"	i
os	config/PETSc/utilities/timer.py	/^import os$/;"	i
os	config/builder.py	/^   import os$/;"	i
os	config/builder.py	/^import os, sys$/;"	i
os	config/builder2.py	/^import os, sys$/;"	i
os	config/cmakeboot.py	/^import os,sys,string$/;"	i
os	config/cmakegen.py	/^import os$/;"	i
os	config/configure.py	/^    import os$/;"	i
os	config/configure.py	/^  import os$/;"	i
os	config/configure.py	/^import os, sys$/;"	i
os	config/examples/arch-aix64-dbg.py	/^  import sys,os$/;"	i
os	config/examples/arch-bgp-ibm-opt.py	/^  import sys,os$/;"	i
os	config/examples/arch-c-exodus-dbg-builder.py	/^  import os$/;"	i
os	config/examples/arch-cray-xt5-opt.py	/^  import sys,os$/;"	i
os	config/examples/arch-cray-xt6-pkgs-opt.py	/^  import os$/;"	i
os	config/examples/arch-cuda-cg-opt.py	/^  import os$/;"	i
os	config/examples/arch-cuda-double.py	/^  import os$/;"	i
os	config/examples/arch-cuda.py	/^  import os$/;"	i
os	config/examples/arch-cuda5-cg-opt.py	/^  import os$/;"	i
os	config/examples/arch-freebsd-cxx-cmplx-pkgs-dbg.py	/^  import sys,os$/;"	i
os	config/examples/arch-freebsd-cxx-pkgs-opt.py	/^  import sys,os$/;"	i
os	config/examples/arch-freebsd-pkgs-opt.py	/^  import sys,os$/;"	i
os	config/examples/arch-fusion-intel-c-opt.py	/^  import os$/;"	i
os	config/examples/arch-linux-c89.py	/^  import sys,os$/;"	i
os	config/examples/arch-linux-complex-gcov.py	/^  import sys,os$/;"	i
os	config/examples/arch-linux-cxx-sieve-gcov.py	/^  import sys,os$/;"	i
os	config/examples/arch-linux-cxx-sieve.py	/^  import sys,os$/;"	i
os	config/examples/arch-linux-dbg-quad.py	/^  import sys,os$/;"	i
os	config/examples/arch-linux-gcc-absoft.py	/^    import sys,os$/;"	i
os	config/examples/arch-linux-gcc-ifc.py	/^  import sys,os$/;"	i
os	config/examples/arch-linux-gcc-pgf90.py	/^  import sys,os$/;"	i
os	config/examples/arch-linux-gcc-real-opt.py	/^  import os$/;"	i
os	config/examples/arch-linux-gcc-real.py	/^  import os$/;"	i
os	config/examples/arch-linux-gcov.py	/^  import sys,os$/;"	i
os	config/examples/arch-linux-gxx-complex.py	/^  import os$/;"	i
os	config/examples/arch-linux-mpich1.py	/^  import os$/;"	i
os	config/examples/arch-linux-pkgs-64idx.py	/^  import sys,os$/;"	i
os	config/examples/arch-linux-pkgs-cxx-mlib.py	/^  import sys,os$/;"	i
os	config/examples/arch-linux-pkgs-dbg-ftn-interfaces.py	/^  import sys,os$/;"	i
os	config/examples/arch-linux-pkgs-gcov.py	/^  import sys,os$/;"	i
os	config/examples/arch-linux-pkgs-opt-threadcomm.py	/^  import sys,os$/;"	i
os	config/examples/arch-linux-pkgs-opt.py	/^  import sys,os$/;"	i
os	config/examples/arch-linux-pkgs-threadcomm.py	/^  import sys,os$/;"	i
os	config/examples/arch-linux-pkgs-valgrind.py	/^  import sys,os$/;"	i
os	config/examples/arch-linux-uni.py	/^  import sys,os$/;"	i
os	config/examples/arch-matlab-uni-mkl_ilp64.py	/^  import os$/;"	i
os	config/examples/arch-moab.py	/^  import os$/;"	i
os	config/examples/arch-mswin-borland.py	/^  import sys,os$/;"	i
os	config/examples/arch-mswin-cuda.py	/^  import os$/;"	i
os	config/examples/arch-mswin-cxx-cmplx.py	/^  import sys,os$/;"	i
os	config/examples/arch-mswin-gnu.py	/^  import sys,os$/;"	i
os	config/examples/arch-mswin.py	/^  import sys,os$/;"	i
os	config/examples/arch-opensolaris-cmplx-pkgs-dbg.py	/^  import sys,os$/;"	i
os	config/examples/arch-opensolaris-misc.py	/^  import sys,os$/;"	i
os	config/examples/arch-opensolaris-pkgs-opt.py	/^  import sys,os$/;"	i
os	config/examples/arch-osx-10.6-cxx-cmplx-pkgs-dbg.py	/^  import sys,os$/;"	i
os	config/examples/arch-osx-10.6-cxx-pkgs-opt.py	/^  import sys,os$/;"	i
os	config/examples/arch-osx-10.6.py	/^  import sys,os$/;"	i
os	config/examples/arch-viennacl.py	/^  import os$/;"	i
os	config/examples/asterix/asterix32-sun.py	/^  import sys,os$/;"	i
os	config/examples/asterix/asterix32.py	/^  import sys,os$/;"	i
os	config/examples/asterix/asterix64-c89.py	/^  import sys,os$/;"	i
os	config/examples/asterix/asterix64-openmpi.py	/^  import sys,os$/;"	i
os	config/examples/asterix/asterix64-sun.py	/^  import sys,os$/;"	i
os	config/examples/asterix/asterix64.py	/^  import sys,os$/;"	i
os	config/examples/basic/arch-gcc-complex-O.py	/^  import os$/;"	i
os	config/examples/basic/arch-gcc-complex.py	/^  import os$/;"	i
os	config/examples/basic/arch-gcc-real-O.py	/^  import os$/;"	i
os	config/examples/basic/arch-gcc-real.py	/^  import os$/;"	i
os	config/examples/basic/arch-gcc64-complex-O.py	/^  import os$/;"	i
os	config/examples/basic/arch-gcc64-complex.py	/^  import os$/;"	i
os	config/examples/basic/arch-gcc64-real-O.py	/^  import os$/;"	i
os	config/examples/basic/arch-gcc64-real.py	/^  import os$/;"	i
os	config/examples/basic/arch-gxx-complex-O.py	/^  import os$/;"	i
os	config/examples/basic/arch-gxx-complex.py	/^  import os$/;"	i
os	config/examples/basic/arch-gxx-real-O.py	/^  import os$/;"	i
os	config/examples/basic/arch-gxx-real.py	/^  import os$/;"	i
os	config/examples/basic/arch-gxx64-complex-O.py	/^  import os$/;"	i
os	config/examples/basic/arch-gxx64-complex.py	/^  import os$/;"	i
os	config/examples/basic/arch-gxx64-real-O.py	/^  import os$/;"	i
os	config/examples/basic/arch-gxx64-real.py	/^  import os$/;"	i
os	config/install.py	/^    f.write('import os\\n')$/;"	i
os	config/install.py	/^import re, os, sys, shutil$/;"	i
os	include/sieve/ISieve.hh	/^      ostringstream& os;$/;"	m	class:ALE::ISieveVisitor::PrintVisitor
os	src/dm/impls/mesh/examples/tests/memoryTests.py	/^import os, sys$/;"	i
os	src/dm/impls/mesh/examples/tests/sieveTests.py	/^import os, sys$/;"	i
ostringstream	include/sieve/ALE_exception.hh	/^typedef std::basic_ostringstream<char> ostringstream;$/;"	t
ostrstr	include/sieve/ALE_exception.hh	/^typedef std::basic_ostringstream<char> ostrstr;$/;"	t
other	include/sieve/ALE_mem.hh	/^    struct rebind { typedef logged_allocator<TT> other;};$/;"	t	struct:ALE::logged_allocator::rebind
other	include/sieve/ALE_mem.hh	/^    struct rebind { typedef polymorphic_allocator<TT> other;};$/;"	t	struct:ALE::polymorphic_allocator::rebind
other	include/sieve/ALE_mem.hh	/^    struct rebind {typedef malloc_allocator<U> other;};$/;"	t	struct:ALE::malloc_allocator::rebind
other	include/sieve/ISieve.hh	/^      typedef SimpleArrow<OtherSource_, OtherTarget_> other;$/;"	t	struct:ALE::SimpleArrow::rebind
other	include/sieve/ISieve.hh	/^      typedef SimpleArrow<target_type, source_type> other;$/;"	t	struct:ALE::SimpleArrow::flip
otherIncludes	config/BuildSystem/config/packages/PETSc.py	/^  otherIncludes = property(getOtherIncludes, setOtherIncludes, doc = 'Includes needed to compile PETSc')$/;"	v	class:Configure
otherIncludes	config/PETSc/petsc.py	/^  otherIncludes = property(getOtherIncludes, setOtherIncludes, doc = 'Includes needed to compile PETSc')$/;"	v	class:Configure
otherLibs	config/BuildSystem/config/packages/PETSc.py	/^  otherLibs = property(getOtherLibs, setOtherLibs, doc = 'Libraries needed to link PETSc')$/;"	v	class:Configure
otherLibs	config/PETSc/petsc.py	/^  otherLibs = property(getOtherLibs, setOtherLibs, doc = 'Libraries needed to link PETSc')$/;"	v	class:Configure
outgroup	include/petsc-private/sfimpl.h	/^  MPI_Group       outgroup;     \/* Group of processes connected to my leaves *\/$/;"	m	struct:_p_PetscSF
output	config/BuildSystem/config/setCompilers.py	/^  def output(self):$/;"	m	class:Configure
output	config/BuildSystem/help.py	/^  def output(self, f = None):$/;"	m	class:Info
output	config/BuildSystem/help.py	/^  def output(self, f = None, sections = None):$/;"	m	class:Help
output	src/dm/impls/mesh/examples/tutorials/ex1.c	/^  PetscBool  output;                 \/\/ Output the mesh$/;"	m	struct:__anon6	file:
outputBanner	config/BuildSystem/config/framework.py	/^  def outputBanner(self):$/;"	m	class:Framework
outputBanner	config/BuildSystem/maker.py	/^  def outputBanner(self):$/;"	m	class:Make
outputCHeader	config/BuildSystem/config/framework.py	/^  def outputCHeader(self, name):$/;"	m	class:Framework
outputCompile	config/BuildSystem/config/base.py	/^  def outputCompile(self, includes = '', body = '', cleanup = 1, codeBegin = None, codeEnd = None):$/;"	m	class:Configure
outputDefine	config/BuildSystem/config/framework.py	/^  def outputDefine(self, f, name, value = None, comment = ''):$/;"	m	class:Framework
outputDefines	config/BuildSystem/config/framework.py	/^  def outputDefines(self, f, child, prefix = None):$/;"	m	class:Framework
outputDestDirDone	config/install.py	/^  def outputDestDirDone(self):$/;"	f
outputElementSource	config/PETSc/FEM.py	/^  def outputElementSource(self, defns, filename = '', extra = ''):$/;"	m	class:QuadratureGenerator
outputFileType	src/dm/impls/mesh/examples/tutorials/ex1.c	/^  FileType   outputFileType;         \/\/ The output file type, e.g. PCICE$/;"	m	struct:__anon6	file:
outputHeader	config/BuildSystem/config/framework.py	/^  def outputHeader(self, name, prefix = None):$/;"	m	class:Framework
outputInstallDone	config/install.py	/^  def outputInstallDone(self):$/;"	m	class:Installer
outputLink	config/BuildSystem/config/base.py	/^  def outputLink(self, includes, body, cleanup = 1, codeBegin = None, codeEnd = None, shared = 0, linkLanguage=None):$/;"	m	class:Configure
outputLocal	src/dm/impls/mesh/examples/tutorials/ex1.c	/^  PetscBool  outputLocal;            \/\/ Output the local form of the mesh$/;"	m	struct:__anon6	file:
outputMakeMacro	config/BuildSystem/config/framework.py	/^  def outputMakeMacro(self, f, name, value):$/;"	m	class:Framework
outputMakeMacroHeader	config/BuildSystem/config/framework.py	/^  def outputMakeMacroHeader(self, name):$/;"	m	class:Framework
outputMakeMacros	config/BuildSystem/config/framework.py	/^  def outputMakeMacros(self, f, child, prefix = None):$/;"	m	class:Framework
outputMakeRule	config/BuildSystem/config/framework.py	/^  def outputMakeRule(self, f, name, dependencies,rule):$/;"	m	class:Framework
outputMakeRuleHeader	config/BuildSystem/config/framework.py	/^  def outputMakeRuleHeader(self, name):$/;"	m	class:Framework
outputMakeRules	config/BuildSystem/config/framework.py	/^  def outputMakeRules(self, f, child, prefix = None):$/;"	m	class:Framework
outputPreprocess	config/BuildSystem/config/base.py	/^  def outputPreprocess(self, codeStr):$/;"	m	class:Configure
outputPrototypes	config/BuildSystem/config/framework.py	/^  def outputPrototypes(self, f, child, language = 'All'):$/;"	m	class:Framework
outputRun	config/BuildSystem/config/base.py	/^  def outputRun(self, includes, body, cleanup = 1, defaultOutputArg = '', executor = None):$/;"	m	class:Configure
outputTypedefs	config/BuildSystem/config/framework.py	/^  def outputTypedefs(self, f, child):$/;"	m	class:Framework
outputVTK	src/dm/impls/mesh/examples/tutorials/ex1.c	/^  PetscBool  outputVTK;              \/\/ Output the mesh in VTK$/;"	m	struct:__anon6	file:
outputVTK	src/dm/impls/mesh/examples/tutorials/ex_coarsen.c	/^  PetscBool outputVTK;           \/\/ Output the mesh in VTK$/;"	m	struct:__anon7	file:
outputVTK	src/dm/impls/mesh/examples/tutorials/ex_coarsen_2.c	/^  PetscBool outputVTK;           \/\/ Output the mesh in VTK$/;"	m	struct:__anon8	file:
outputVTK	src/dm/impls/mesh/examples/tutorials/ex_coarsen_3.c	/^  PetscBool outputVTK;           \/\/ Output the mesh in VTK$/;"	m	struct:__anon1	file:
overlap	src/dm/impls/mesh/examples/tests/sieveTests.cxx	/^  PetscBool  overlap;       \/\/ Run the Overlap tests$/;"	m	struct:__anon11	file:
overlapSieve	include/sieve/Partitioner.hh	/^      const Sieve& overlapSieve;$/;"	m	class:ALE::Partitioner::OffsetVisitor
overlap_topology_type	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^      typedef ALE::New::Topology<int, dsieve_type>                                  overlap_topology_type;$/;"	t	class:ALE::Test::OverlapTest
overlap_type	include/sieve/Field.hh	/^    typedef Overlap_                                 overlap_type;$/;"	t	class:ALE::Field
p	config/BuildSystem/RDict.py	/^      p = 1$/;"	v	class:RDict.serve.ProcessHandler
p	include/petsc-private/dmdaimpl.h	/^  PetscInt              m,n,p;                 \/* processor layout *\/$/;"	m	struct:__anon23
p	include/petscdmmesh.hh	/^  point_type             p;$/;"	m	class:AdjVisitor
p	include/sieve/ISieve.hh	/^      int                 i, p;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
p	include/sieve/ISieve.hh	/^      int            i, p;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
pEnd	include/petsc-private/dmpleximpl.h	/^  PetscInt  pStart, pEnd;   \/* Bounds for index lookup *\/$/;"	m	struct:_n_DMLabel
pEnd	include/petsc-private/isimpl.h	/^  PetscInt pStart, pEnd; \/* The chart: all points are contained in [pStart, pEnd) *\/$/;"	m	struct:_n_PetscUniformSection
pEnd	src/dm/impls/plex/examples/tests/ex6.c	/^  PetscInt  pStart, pEnd; \/* The label chart *\/$/;"	m	struct:__anon2	file:
pR	include/sieve/Partitioner.hh	/^      typename ISieveVisitor::PointRetriever<Sieve> *pR;$/;"	m	class:ALE::Partitioner::MeetVisitor
pStart	include/petsc-private/dmpleximpl.h	/^  PetscInt  pStart, pEnd;   \/* Bounds for index lookup *\/$/;"	m	struct:_n_DMLabel
pStart	include/petsc-private/isimpl.h	/^  PetscInt pStart, pEnd; \/* The chart: all points are contained in [pStart, pEnd) *\/$/;"	m	struct:_n_PetscUniformSection
pStart	src/dm/impls/plex/examples/tests/ex6.c	/^  PetscInt  pStart, pEnd; \/* The label chart *\/$/;"	m	struct:__anon2	file:
package	config/BuildSystem/config/packages/BlasLapack.py	/^import config.package$/;"	i
package	config/BuildSystem/config/packages/CHOLMOD.py	/^import config.package$/;"	i
package	config/BuildSystem/config/packages/MOAB.py	/^import config.package$/;"	i
package	config/BuildSystem/config/packages/MPI.py	/^import config.package$/;"	i
package	config/BuildSystem/config/packages/UMFPACK.py	/^import config.package$/;"	i
package	config/BuildSystem/config/packages/boost.py	/^import config.package$/;"	i
package	config/BuildSystem/config/packages/cusp.py	/^import config.package$/;"	i
package	config/BuildSystem/config/packages/exodusii.py	/^import config.package$/;"	i
package	config/BuildSystem/config/packages/f2cblaslapack.py	/^import config.package$/;"	i
package	config/BuildSystem/config/packages/fiat.py	/^import config.package$/;"	i
package	config/BuildSystem/config/packages/hdf5.py	/^import config.package$/;"	i
package	config/BuildSystem/config/packages/netcdf-cxx.py	/^import config.package$/;"	i
package	config/BuildSystem/config/packages/netcdf.py	/^import config.package$/;"	i
package	config/BuildSystem/config/packages/scientificpython.py	/^import config.package$/;"	i
package	config/BuildSystem/config/packages/thrust.py	/^import config.package$/;"	i
package	config/PETSc/package.py	/^import config.package$/;"	i
package	config/PETSc/packages/Chaco.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/FFC.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/Generator.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/MUMPS.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/Mathematica.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/Matlab.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/MatlabEngine.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/Numpy.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/P3Dlib.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/PARTY.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/PTScotch.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/PVODE.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/PaStiX.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/Sieve.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/Suggar.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/SuperLU.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/SuperLU_DIST.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/Triangle.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/X.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/Zoltan.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/afterimage.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/ams.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/babel.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/c2html.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/ccafe.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/clique.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/cmake.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/cproto.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/ctetgen.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/cuda.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/elemental.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/expat.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/fftw.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/glut.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/hwloc.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/hypre.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/java.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/lgrind.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/metis.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/ml.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/mpe.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/mpi4py.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/opengl.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/openmp.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/oski.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/pARMS.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/pami.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/papi.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/parmetis.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/pcbddc.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/petsc4py.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/pthread.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/pthreadclasses.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/scalapack.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/server.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/sowing.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/spai.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/sprng.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/sundials.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/tetgen.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/threadcomm.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/txpetscgpu.py	/^import config.package$/;"	i
package	config/PETSc/packages/valgrind.py	/^import PETSc.package$/;"	i
package	config/PETSc/packages/yaml.py	/^import PETSc.package$/;"	i
packages	bin/TOPSInstaller.py	/^        packages = ["  MUMPS","Parmetis (parallel partitioning)","  Chaco","  Party","  PTScotch","  ml","  SPAI","Matlab"]$/;"	v
packages	bin/TOPSInstaller.py	/^        packages = ["hypre (parallel preconditioners)","SuperLU_dist (parallel sparse direct solver)", "SuperLU","Sundials (parallel ODE integrators)"]$/;"	v
packtogether	include/petsc-private/vecimpl.h	/^  PetscBool      packtogether;         \/* packs all the messages before sending, same with receive *\/$/;"	m	struct:_p_VecScatter
pair	include/sieve/ALE_containers.hh	/^    pair() : std::pair<X,Y>(){};$/;"	f	struct:ALE::pair
pair	include/sieve/ALE_containers.hh	/^    pair(const X& x, const Y& y) : std::pair<X,Y>(x,y) {};$/;"	f	struct:ALE::pair
pair	include/sieve/ALE_containers.hh	/^    pair(const pair& p) : std::pair<X,Y>(p.first, p.second) {};$/;"	f	struct:ALE::pair
pair	include/sieve/ALE_containers.hh	/^  struct pair : public std::pair<X,Y> {$/;"	s	namespace:ALE
pair1_alloc_type	include/sieve/Topology.hh	/^    typedef typename alloc_type::template rebind<std::pair<const patch_type, Obj<sieve_type> > >::other       pair1_alloc_type;$/;"	t	class:ALE::Topology
pair2_alloc_type	include/sieve/Topology.hh	/^    typedef typename alloc_type::template rebind<std::pair<const patch_type, Obj<patch_label_type> > >::other pair2_alloc_type;$/;"	t	class:ALE::Topology
pair3_alloc_type	include/sieve/Topology.hh	/^    typedef typename alloc_type::template rebind<std::pair<const patch_type, int> >::other                    pair3_alloc_type;$/;"	t	class:ALE::Topology
pair4_alloc_type	include/sieve/Topology.hh	/^    typedef typename alloc_type::template rebind<std::pair<const std::string, label_type> >::other            pair4_alloc_type;$/;"	t	class:ALE::Topology
pair_alloc_type	include/sieve/Field.hh	/^    typedef typename alloc_type::template rebind<std::pair<const point_type, fiber_type> >::other pair_alloc_type;$/;"	t	class:ALE::NewUniformSection
pair_alloc_type	include/sieve/Field.hh	/^    typedef typename alloc_type::template rebind<std::pair<const point_type, fiber_type> >::other pair_alloc_type;$/;"	t	class:ALE::UniformSection
parent	include/petsc-private/logimpl.h	/^  int            parent;   \/* The parent id *\/$/;"	m	struct:_Object
parent	include/petsc-private/petscimpl.h	/^  PetscObject          parent;$/;"	m	struct:_p_PetscObject
parent	include/petscsys.h	/^  MPI_Comm   parent;      \/* parent communicator *\/$/;"	m	struct:_n_PetscSubcomm
parentid	include/petsc-private/petscimpl.h	/^  PetscInt             parentid;$/;"	m	struct:_p_PetscObject
parse	config/BuildSystem/patch.py	/^  def parse(self, stream):$/;"	m	class:PatchSet
parse	include/sieve/ALE_args.hh	/^    ArgDB& parse(int argc, char **argv) {$/;"	f	class:ALE::ArgDB
parse	src/dm/impls/mesh/examples/tests/memoryParse.py	/^def parse(filename, sizeHist, classHist):$/;"	f
parseAction	config/builder.py	/^  def parseAction(self, lines):$/;"	m	class:MakeParser
parseArgument	config/BuildSystem/nargs.py	/^  def parseArgument(arg, ignoreDouble = 0):$/;"	m	class:Arg
parseArgument	config/BuildSystem/nargs.py	/^  parseArgument = staticmethod(parseArgument)$/;"	v	class:Arg
parseDocString	config/BuildSystem/maker.py	/^  def parseDocString(self, docstring, defaultName = None):$/;"	m	class:BasicMake
parseSAX	include/petscdmmesh_formats.hh	/^      static void parseSAX(const std::string& filename, ALE::Dolfin::XMLObject *xmlObject) {$/;"	f	class:ALE::Dolfin::Builder
parseShellOutput	config/BuildSystem/config/autoconf.py	/^  def parseShellOutput(self, output):$/;"	m	class:Configure
parseTest	config/builder.py	/^  def parseTest(self, filename, testTarget):$/;"	m	class:MakeParser
parseValue	config/BuildSystem/nargs.py	/^  def parseValue(arg):$/;"	m	class:Arg
parseValue	config/BuildSystem/nargs.py	/^  parseValue = staticmethod(parseValue)$/;"	v	class:Arg
parse_makefile	config/builder.py	/^    from distutils.sysconfig import parse_makefile$/;"	i
parse_makefile	config/cmakegen.py	/^  from distutils.sysconfig import parse_makefile$/;"	i
parse_version_h	bin/petscnagupgrade.py	/^def parse_version_h(pv):$/;"	f
parseargs	bin/parseargs.py	/^def parseargs(search_arg,return_nargs,arg_list):$/;"	f
parseargs	bin/urlget.py	/^def parseargs(search_arg,return_nargs,arg_list):$/;"	f
parser	config/builder2.py	/^  parser = argparse.ArgumentParser(description     = 'PETSc BuildSystem',$/;"	v
parser	config/cmakegen.py	/^  parser = optparse.OptionParser()$/;"	v
parser_build	config/builder2.py	/^  parser_build = subparsers.add_parser('build', help='Compile all out of date source and generate a new shared library')$/;"	v
parser_check	config/builder2.py	/^  parser_check = subparsers.add_parser('buildExample', help='Compile and link an example')$/;"	v
parser_check	config/builder2.py	/^  parser_check = subparsers.add_parser('check', help='Check that build is functional')$/;"	v
parser_clean	config/builder2.py	/^  parser_clean = subparsers.add_parser('clean', help='Remove source database and all objects')$/;"	v
parser_purge	config/builder2.py	/^  parser_purge = subparsers.add_parser('purge', help='Remove a set of files from the source database')$/;"	v
parser_regression	config/builder2.py	/^  parser_regression = subparsers.add_parser('regression', help='Execute regression tests')$/;"	v
parser_show	config/builder2.py	/^  parser_show = subparsers.add_parser('show', help='Print run information')$/;"	v
parser_stubs	config/builder2.py	/^  parser_stubs = subparsers.add_parser('stubs', help='Build stubs for certain languages')$/;"	v
part_type	include/sieve/Partitioner.hh	/^        typedef int                              part_type;$/;"	t	class:ALE::New::ParMetis::Partitioner
part_type	include/sieve/Partitioner.hh	/^        typedef int                              part_type;$/;"	t	class:ALE::New::Zoltan::Partitioner
part_type	include/sieve/Partitioner.hh	/^        typedef short int                        part_type;$/;"	t	class:ALE::New::Chaco::Partitioner
part_type	include/sieve/Partitioner.hh	/^      typedef int    part_type;$/;"	t	class:ALE::ParMetis::Partitioner
part_type	include/sieve/Partitioner.hh	/^      typedef int    part_type;$/;"	t	class:ALE::Simple::Partitioner
part_type	include/sieve/Partitioner.hh	/^      typedef short int part_type;$/;"	t	class:ALE::Chaco::Partitioner
part_type	include/sieve/Partitioner.hh	/^    typedef typename GraphPartitioner::part_type part_type;$/;"	t	class:ALE::Partitioner
part_weights	include/petsc-private/matimpl.h	/^  PetscReal   *part_weights;$/;"	m	struct:_p_MatPartitioning
partition	include/sieve/Partitioner.hh	/^      void partition(const PetscInt numVertices, const PetscInt start[], const PetscInt adjacency[], const Obj<Section>& partition, const MeshManager& manager) {$/;"	f	class:ALE::ParMetis::Partitioner
partition	include/sieve/Partitioner.hh	/^      void partition(const int numVertices, const int start[], const int adjacency[], const Obj<Section>& partition, const MeshManager& manager) {$/;"	f	class:ALE::Chaco::Partitioner
partition	include/sieve/Partitioner.hh	/^      void partition(const int numVertices, const int start[], const int adjacency[], const Obj<Section>& partition, const MeshManager& manager) {$/;"	f	class:ALE::Simple::Partitioner
partition	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^  PetscBool  partition;   \/\/ Run the Partition tests$/;"	m	struct:__anon14	file:
partition	src/dm/impls/mesh/examples/tutorials/ex1.c	/^  SectionInt partition;              \/\/ Section with partition number in each cell$/;"	m	struct:__anon6	file:
partitionSieve	include/sieve/Partitioner.hh	/^        static part_type *partitionSieve(const Obj<bundle_type>& bundle, const int dim) {$/;"	f	class:ALE::New::Chaco::Partitioner
partitionSieve	include/sieve/Partitioner.hh	/^        static part_type *partitionSieve(const Obj<bundle_type>& bundle, const int dim) {$/;"	f	class:ALE::New::ParMetis::Partitioner
partitionSieve	include/sieve/Partitioner.hh	/^        static part_type *partitionSieve(const Obj<bundle_type>& bundle, const int dim) {$/;"	f	class:ALE::New::Zoltan::Partitioner
partitionSieveByFace	include/sieve/Partitioner.hh	/^        static part_type *partitionSieveByFace(const Obj<bundle_type>& bundle, const int dim) {$/;"	f	class:ALE::New::Chaco::Partitioner
partitionSieveByFace	include/sieve/Partitioner.hh	/^        static part_type *partitionSieveByFace(const Obj<bundle_type>& bundle, const int dim) {$/;"	f	class:ALE::New::ParMetis::Partitioner
partitionSieveByFace	include/sieve/Partitioner.hh	/^        static part_type *partitionSieveByFace(const Obj<bundle_type>& bundle, const int dim) {$/;"	f	class:ALE::New::Zoltan::Partitioner
partition_type	include/sieve/Distribution.hh	/^    typedef ALE::ISection<rank_type, point_type>          partition_type;$/;"	t	class:ALE::DistributionNew
partitioner	src/dm/impls/mesh/examples/tests/ex1.c	/^  char          partitioner[2048]; \/* The graph partitioner *\/$/;"	m	struct:__anon16	file:
partitioner	src/dm/impls/mesh/examples/tests/ex2.c	/^  char          partitioner[2048]; \/* The graph partitioner *\/$/;"	m	struct:__anon17	file:
partitioner	src/dm/impls/mesh/examples/tests/ex3.c	/^  char          partitioner[2048]; \/* The graph partitioner *\/$/;"	m	struct:__anon15	file:
partitioner	src/dm/impls/mesh/examples/tutorials/ex1.c	/^  char       partitioner[2048];      \/\/ The partitioner name$/;"	m	struct:__anon6	file:
partitioner_type	include/sieve/Distribution.hh	/^    typedef Partitioner                                   partitioner_type;$/;"	t	class:ALE::DistributionNew
patch	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^patch_type                           patch;$/;"	m	class:ALE::Hierarchy::HierarchyBuilder
patchSize	include/petsc-private/dmpatchimpl.h	/^  MatStencil patchSize;$/;"	m	struct:__anon10
patch_label_alloc_type	include/sieve/Topology.hh	/^    typedef typename alloc_type::template rebind<patch_label_type>::other                                     patch_label_alloc_type;$/;"	t	class:ALE::Topology
patch_label_ptr	include/sieve/Topology.hh	/^    typedef typename patch_label_alloc_type::pointer                                                          patch_label_ptr;$/;"	t	class:ALE::Topology
patch_label_type	include/sieve/Topology.hh	/^    typedef typename ALE::Sifter<int, point_type, int>                                                        patch_label_type;$/;"	t	class:ALE::Topology
patch_stream	config/BuildSystem/patch.py	/^  def patch_stream(self, instream, hunks):$/;"	m	class:PatchSet
patch_type	include/sieve/Field.hh	/^    typedef Patch_                                   patch_type;$/;"	t	class:ALE::Field
patch_type	include/sieve/Sections.hh	/^      typedef int                              patch_type;$/;"	t	class:ALE::New::ConeSizeSection
patch_type	include/sieve/Topology.hh	/^    typedef Patch_                                                patch_type;$/;"	t	class:ALE::Topology
patch_type	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^      typedef OverlapTest::topology_type::patch_type patch_type;$/;"	t	class:ALE::Test::SupportSizer
patch_type	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^typedef ALE::Mesh::topology_type::patch_type            patch_type;$/;"	t	namespace:ALE::Hierarchy
path	bin/TOPSGenerator.py	/^        import os.path$/;"	i
path	bin/TOPSInstaller.py	/^        import os.path$/;"	i
path	bin/petscnagupgrade.py	/^import os.path, time,sys$/;"	i
path	bin/pythonscripts/PetscStaticFunctionCandidates.py	/^path = ".\/src\/ts\/"$/;"	v
path	config/BuildSystem/config/functions.py	/^import os.path$/;"	i
pause	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*pause)(PetscDraw);$/;"	m	struct:_PetscDrawOps
pause	include/petsc-private/drawimpl.h	/^  PetscReal       pause;       \/* sleep time after a synchronized flush *\/$/;"	m	struct:_p_PetscDraw
pc	include/petsc-private/kspimpl.h	/^  PC         pc;$/;"	m	struct:_p_KSP
pc	include/petsc-private/snesimpl.h	/^  SNES      pc;$/;"	m	struct:_p_SNES
pc_side	include/petsc-private/kspimpl.h	/^  PCSide          pc_side;                  \/* flag for left, right, or symmetric preconditioning *\/$/;"	m	struct:_p_KSP
pcomm	src/dm/impls/moab/dmmoab.cxx	/^  moab::ParallelComm *pcomm;$/;"	m	struct:__anon1	file:
pcomm	src/dm/impls/moab/dmmoab.cxx	/^  moab::ParallelComm *pcomm;$/;"	m	struct:__anon2	file:
pcomm	src/dm/impls/moab/examples/tests/ex1.cxx	/^  moab::ParallelComm *pcomm;$/;"	m	class:AppCtx	file:
pcside	include/petsc-private/snesimpl.h	/^  PCSide    pcside;$/;"	m	struct:_p_SNES
pctx	include/petsc-private/snesimpl.h	/^  void *pctx;$/;"	m	struct:_p_DMSNES
perfInfo	include/petsclog.h	/^  PetscEventPerfInfo perfInfo;  \/* The stage performance information *\/$/;"	m	struct:_PetscStageInfo
perm	include/petsc-private/matimpl.h	/^  IS perm;$/;"	m	struct:_p_MatCoarsen
perm_type	include/sieve/Ordering.hh	/^    typedef IUniformSection<int,int> perm_type;$/;"	t	class:ALE::Ordering
permute	include/petsc-private/matimpl.h	/^  PetscErrorCode (*permute)(Mat,IS,IS,Mat*);$/;"	m	struct:_MatOps
petsc	config/BuildSystem/regression/testCase.py	/^  petsc = None$/;"	v	class:PETScTest
petscObj	include/sieve/Sifter.hh	/^    PetscObject petscObj() const {return this->_petscObj;};$/;"	f	class:ALE::ASifter
petsc_BaseTime	include/petsctime.h	/^PETSC_EXTERN PetscLogDouble petsc_BaseTime;$/;"	v
petsc_TotalFlops	include/petsclog.h	/^PETSC_EXTERN PetscLogDouble petsc_TotalFlops;$/;"	v
petsc_actions	include/petsc-private/logimpl.h	/^PETSC_EXTERN Action    *petsc_actions;$/;"	v
petsc_allreduce_ct	include/petsclog.h	/^PETSC_EXTERN PetscLogDouble petsc_allreduce_ct;$/;"	v
petsc_arch	config/configure.py	/^petsc_arch = ''$/;"	v
petsc_conf	bin/pythonscripts/PetscBinaryIO.py	/^            import petsc_conf$/;"	i
petsc_configure	config/configure.py	/^def petsc_configure(configure_options):$/;"	f
petsc_gather_ct	include/petsclog.h	/^PETSC_EXTERN PetscLogDouble petsc_gather_ct;$/;"	v
petsc_irecv_ct	include/petsclog.h	/^PETSC_EXTERN PetscLogDouble petsc_irecv_ct;$/;"	v
petsc_irecv_len	include/petsclog.h	/^PETSC_EXTERN PetscLogDouble petsc_irecv_len;$/;"	v
petsc_isend_ct	include/petsclog.h	/^PETSC_EXTERN PetscLogDouble petsc_isend_ct;$/;"	v
petsc_isend_len	include/petsclog.h	/^PETSC_EXTERN PetscLogDouble petsc_isend_len;$/;"	v
petsc_logActions	include/petsc-private/logimpl.h	/^PETSC_EXTERN PetscBool petsc_logActions;$/;"	v
petsc_logObjects	include/petsc-private/logimpl.h	/^PETSC_EXTERN PetscBool petsc_logObjects;$/;"	v
petsc_maxActions	include/petsc-private/logimpl.h	/^PETSC_EXTERN int        petsc_numActions, petsc_maxActions;$/;"	v
petsc_maxObjects	include/petsc-private/logimpl.h	/^PETSC_EXTERN int        petsc_numObjects, petsc_maxObjects;$/;"	v
petsc_mpiu_2int	include/petscmath.h	/^struct petsc_mpiu_2int {PetscInt a,b;};$/;"	s
petsc_mpiu_2scalar	include/petscmath.h	/^struct petsc_mpiu_2scalar {PetscScalar a,b;};$/;"	s
petsc_mpiu_c_complex	include/petscmath.h	/^  typedef complexlib::complex<float> petsc_mpiu_c_complex;$/;"	t
petsc_mpiu_c_complex	include/petscmath.h	/^  typedef float _Complex petsc_mpiu_c_complex;$/;"	t
petsc_mpiu_c_complex	include/petscmath.h	/^  typedef struct {float real,imag;} petsc_mpiu_c_complex;$/;"	t	typeref:struct:__anon59
petsc_mpiu_c_double_complex	include/petscmath.h	/^  typedef complexlib::complex<double> petsc_mpiu_c_double_complex;$/;"	t
petsc_mpiu_c_double_complex	include/petscmath.h	/^  typedef double _Complex petsc_mpiu_c_double_complex;$/;"	t
petsc_mpiu_c_double_complex	include/petscmath.h	/^  typedef struct {double real,imag;} petsc_mpiu_c_double_complex;$/;"	t	typeref:struct:__anon58
petsc_numActions	include/petsc-private/logimpl.h	/^PETSC_EXTERN int        petsc_numActions, petsc_maxActions;$/;"	v
petsc_numObjects	include/petsc-private/logimpl.h	/^PETSC_EXTERN int        petsc_numObjects, petsc_maxObjects;$/;"	v
petsc_numObjectsDestroyed	include/petsc-private/logimpl.h	/^PETSC_EXTERN int        petsc_numObjectsDestroyed;$/;"	v
petsc_objects	include/petsc-private/logimpl.h	/^PETSC_EXTERN Object    *petsc_objects;$/;"	v
petsc_recv_ct	include/petsclog.h	/^PETSC_EXTERN PetscLogDouble petsc_recv_ct;$/;"	v
petsc_recv_len	include/petsclog.h	/^PETSC_EXTERN PetscLogDouble petsc_recv_len;$/;"	v
petsc_scatter_ct	include/petsclog.h	/^PETSC_EXTERN PetscLogDouble petsc_scatter_ct;$/;"	v
petsc_send_ct	include/petsclog.h	/^PETSC_EXTERN PetscLogDouble petsc_send_ct;$/;"	v
petsc_send_len	include/petsclog.h	/^PETSC_EXTERN PetscLogDouble petsc_send_len;$/;"	v
petsc_stageLog	include/petsclog.h	/^PETSC_EXTERN PetscStageLog petsc_stageLog;$/;"	v
petsc_sum_of_waits_ct	include/petsclog.h	/^PETSC_EXTERN PetscLogDouble petsc_sum_of_waits_ct;$/;"	v
petsc_tmp_flops	include/petsclog.h	/^PETSC_EXTERN PetscLogDouble petsc_tmp_flops;$/;"	v
petsc_traceblanks	include/petsc-private/logimpl.h	/^PETSC_EXTERN const char    *petsc_traceblanks;$/;"	v
petsc_tracefile	include/petsc-private/logimpl.h	/^PETSC_EXTERN FILE          *petsc_tracefile;$/;"	v
petsc_tracelevel	include/petsc-private/logimpl.h	/^PETSC_EXTERN int            petsc_tracelevel;$/;"	v
petsc_tracespace	include/petsc-private/logimpl.h	/^PETSC_EXTERN char           petsc_tracespace[128];$/;"	v
petsc_tracetime	include/petsc-private/logimpl.h	/^PETSC_EXTERN PetscLogDouble petsc_tracetime;$/;"	v
petsc_wait_all_ct	include/petsclog.h	/^PETSC_EXTERN PetscLogDouble petsc_wait_all_ct;$/;"	v
petsc_wait_any_ct	include/petsclog.h	/^PETSC_EXTERN PetscLogDouble petsc_wait_any_ct;$/;"	v
petsc_wait_ct	include/petsclog.h	/^PETSC_EXTERN PetscLogDouble petsc_wait_ct;$/;"	v
petscdir	bin/petscnagupgrade.py	/^    petscdir  = '.'$/;"	v
petscdir	bin/petscnagupgrade.py	/^    petscdir = os.environ['PETSC_DIR']$/;"	v
petscnagupgrade	config/configure.py	/^    import petscnagupgrade$/;"	i
petscnative	include/petsc-private/vecimpl.h	/^  PetscBool              petscnative;  \/* means the ->data starts with VECHEADER and can use VecGetArrayFast()*\/$/;"	m	struct:_p_Vec
petscroot	bin/TOPSInstaller.py	/^        petscroot = os.path.join(reply,'petsc-dev')$/;"	v
petscroutine	include/petscerror.h	/^        PetscBool petscroutine[PETSCSTACKSIZE];$/;"	m	struct:__anon13
petscstack	include/petscerror.h	/^PETSC_EXTERN PETSC_PTHREAD_LOCAL PetscStack *petscstack;$/;"	v
petscstack	include/petscerror.h	/^PETSC_EXTERN PetscStack *petscstack;$/;"	v
petscstack	include/petscerror.h	/^PETSC_EXTERN PetscThreadKey petscstack;$/;"	v
pfunc	include/petsc-private/threadcommimpl.h	/^  PetscThreadKernel pfunc;                         \/* Kernel function *\/$/;"	m	struct:_p_PetscThreadCommJobCtx
pivotinblocks	include/petscmat.h	/^  PetscReal     pivotinblocks;  \/* for BAIJ and SBAIJ matrices pivot in factorization on blocks, default 1.0$/;"	m	struct:__anon96
pixeltocoordinate	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*pixeltocoordinate)(PetscDraw,PetscInt,PetscInt,PetscReal*,PetscReal*);$/;"	m	struct:_PetscDrawOps
pkgsources	config/cmakegen.py	/^def pkgsources(pkg):$/;"	f
placearray	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*placearray)(Vec,const PetscScalar*);     \/* place data array *\/$/;"	m	struct:_VecOps
platform	config/BuildSystem/config/compile/C.py	/^    import platform$/;"	i
platform	config/BuildSystem/config/framework.py	/^import platform$/;"	i
platform	config/PETSc/Configure.py	/^    import platform$/;"	i
pman	include/petscoptions.h	/^  char              *pman;$/;"	m	struct:_n_PetscOptions
pmat	include/petsc-private/pcimpl.h	/^  Mat            mat,pmat;$/;"	m	struct:_p_PC
pn	include/petscdmmesh_formats.hh	/^      ALE::Mesh<PetscInt,PetscScalar>::real_section_type::value_type pn;$/;"	m	struct:ALE::PCICE::__anon9
pn	include/petscdmmesh_formats.hh	/^      ALE::Mesh<PetscInt,PetscScalar>::real_section_type::value_type pn;$/;"	m	struct:ALE::PFLOTRAN::__anon10
point	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*point)(PetscDraw,PetscReal,PetscReal,int);$/;"	m	struct:_PetscDrawOps
point	include/sieve/Sieve.hh	/^      point_type  point;$/;"	m	struct:ALE::SieveDef::Rec
point	include/sieve/Sifter.hh	/^      point_type     point;$/;"	m	struct:ALE::SifterDef::Rec
pointAlloc	include/sieve/ISieve.hh	/^    point_allocator_type pointAlloc;$/;"	m	class:ALE::IFSieve
pointAllocated	include/sieve/ISieve.hh	/^    bool                 pointAllocated;$/;"	m	class:ALE::IFSieve
pointArray	include/sieve/ISieve.hh	/^    typedef ALE::array<point_type> pointArray;$/;"	t	class:ALE::IFSieve
pointArray	include/sieve/Sieve.hh	/^      typedef ALE::array<point_type>  pointArray;$/;"	t	class:ALE::Sieve
pointRanks	include/sieve/Overlap.hh	/^  rank_type  *pointRanks;        \/\/ [numPointRanks]: Array of partner process ranks which share a given point (needs search and allocation)$/;"	m	class:PETSc::Overlap
pointRemotePoints	include/sieve/Overlap.hh	/^  point_type *pointRemotePoints; \/\/ [numPointRanks]: Array of remote points linked to a given point (needs search and allocation)$/;"	m	class:PETSc::Overlap
pointSet	include/sieve/ISieve.hh	/^      const Set&   pointSet;$/;"	m	class:ALE::ISieveVisitor::FilteredPointRetriever
pointSet	include/sieve/ISieve.hh	/^    typedef std::set<point_type>   pointSet;$/;"	t	class:ALE::IFSieve
pointSet	include/sieve/Sieve.hh	/^      typedef std::set<point_type>    pointSet;$/;"	t	class:ALE::Sieve
pointTag	include/sieve/Sieve.hh	/^      struct pointTag{};$/;"	s	struct:ALE::SieveDef::RecContainerTraits
pointTag	include/sieve/Sifter.hh	/^      struct pointTag{};$/;"	s	struct:ALE::SifterDef::RecContainerTraits
point_alloc_type	include/sieve/Field.hh	/^    typedef typename alloc_type::template rebind<point_type>::other                               point_alloc_type;$/;"	t	class:ALE::NewUniformSection
point_alloc_type	include/sieve/Field.hh	/^    typedef typename alloc_type::template rebind<point_type>::other point_alloc_type;$/;"	t	class:ALE::UniformSection
point_alloc_type	include/sieve/IField.hh	/^    typedef typename alloc_type::template rebind<point_type>::other point_alloc_type;$/;"	t	class:ALE::IUniformSection
point_alloc_type	include/sieve/SectionCompletion.hh	/^      typedef typename alloc_type::template rebind<point_type>::other                          point_alloc_type;$/;"	t	class:ALE::New::SectionCompletion
point_allocator_type	include/sieve/ISieve.hh	/^    typedef Allocator_                                                        point_allocator_type;$/;"	t	class:ALE::IFSieve
point_set_alloc_type	include/sieve/Topology.hh	/^    typedef typename alloc_type::template rebind<point_set_type>::other      point_set_alloc_type;$/;"	t	class:ALE::Topology
point_set_ptr	include/sieve/Topology.hh	/^    typedef typename point_set_alloc_type::pointer                           point_set_ptr;$/;"	t	class:ALE::Topology
point_set_type	include/sieve/Topology.hh	/^    typedef typename std::set<point_type, std::less<point_type>, alloc_type> point_set_type;$/;"	t	class:ALE::Topology
point_type	include/petscdmmesh.hh	/^  typedef typename ALE::Mesh<PetscInt,PetscScalar>::point_type point_type;$/;"	t	class:AdjVisitor
point_type	include/sieve/CartesianSieve.hh	/^      typedef PointType_ point_type;$/;"	t	class:ALE::CartesianSieveDef::ConeSequence
point_type	include/sieve/CartesianSieve.hh	/^      typedef PointType_ point_type;$/;"	t	class:ALE::CartesianSieveDef::PointSequence
point_type	include/sieve/CartesianSieve.hh	/^      typedef PointType_ point_type;$/;"	t	class:ALE::CartesianSieveDef::SupportSequence
point_type	include/sieve/CartesianSieve.hh	/^    typedef Point_ point_type;$/;"	t	class:ALE::CartesianSieve
point_type	include/sieve/CartesianSieve.hh	/^    typedef int                                point_type;$/;"	t	class:ALE::CartesianMesh
point_type	include/sieve/CartesianSieve.hh	/^    typedef sieve_type::point_type                                    point_type;$/;"	t	class:ALE::CartesianBundle
point_type	include/sieve/Completion.hh	/^      typedef int                                                                         point_type;$/;"	t	class:ALE::New::Completion
point_type	include/sieve/Distribution.hh	/^    typedef typename Mesh::point_type                     point_type;$/;"	t	class:ALE::DistributionNew
point_type	include/sieve/Distribution.hh	/^    typedef typename bundle_type::point_type                                            point_type;$/;"	t	class:ALE::Distribution
point_type	include/sieve/Field.hh	/^    typedef Point_                                                  point_type;$/;"	t	class:ALE::ConstantSection
point_type	include/sieve/Field.hh	/^    typedef Point_                                                  point_type;$/;"	t	class:ALE::FEMSection
point_type	include/sieve/Field.hh	/^    typedef Point_                                                  point_type;$/;"	t	class:ALE::GeneralSection
point_type	include/sieve/Field.hh	/^    typedef Point_                                                  point_type;$/;"	t	class:ALE::Section
point_type	include/sieve/Field.hh	/^    typedef Point_                                           point_type;$/;"	t	class:ALE::NewUniformSection
point_type	include/sieve/Field.hh	/^    typedef Point_                                           point_type;$/;"	t	class:ALE::UniformSection
point_type	include/sieve/Field.hh	/^    typedef Point_                              point_type;$/;"	t	class:ALE::DiscreteSieve
point_type	include/sieve/Field.hh	/^    typedef Point_ point_type;$/;"	t	class:ALE::FauxConstantSection
point_type	include/sieve/Field.hh	/^    typedef typename section_type::point_type        point_type;$/;"	t	class:ALE::Field
point_type	include/sieve/IField.hh	/^    typedef Point_                                                  point_type;$/;"	t	class:ALE::IUniformSection
point_type	include/sieve/IField.hh	/^    typedef Point_ point_type;$/;"	t	class:ALE::IConstantSection
point_type	include/sieve/IField.hh	/^    typedef typename base::point_type       point_type;$/;"	t	class:ALE::IGeneralSection
point_type	include/sieve/IField.hh	/^    typedef typename base::point_type       point_type;$/;"	t	class:ALE::ISection
point_type	include/sieve/INumbering.hh	/^    typedef typename base_type::point_type             point_type;$/;"	t	class:ALE::IGlobalOrder
point_type	include/sieve/INumbering.hh	/^    typedef typename base_type::point_type             point_type;$/;"	t	class:ALE::INumbering
point_type	include/sieve/INumbering.hh	/^    typedef typename bundle_type::point_type                                                     point_type;$/;"	t	class:ALE::INumberingFactory
point_type	include/sieve/ISieve.hh	/^      typedef PointType_ point_type;$/;"	t	class:ALE::IFSieveDef::Sequence
point_type	include/sieve/ISieve.hh	/^      typedef typename Order::point_type point_type;$/;"	t	class:ALE::ISieveVisitor::IndicesVisitor
point_type	include/sieve/ISieve.hh	/^      typedef typename Section::point_type point_type;$/;"	t	class:ALE::ISieveVisitor::IndicesVisitor
point_type	include/sieve/ISieve.hh	/^      typedef typename Sieve::point_type              point_type;$/;"	t	class:ALE::ISieveVisitor::MeshNConeRetriever
point_type	include/sieve/ISieve.hh	/^      typedef typename Sieve::point_type              point_type;$/;"	t	class:ALE::ISieveVisitor::NConeRetriever
point_type	include/sieve/ISieve.hh	/^      typedef typename Sieve::point_type point_type;$/;"	t	class:ALE::ISieveVisitor::ArrowRetriever
point_type	include/sieve/ISieve.hh	/^      typedef typename Sieve::point_type point_type;$/;"	t	class:ALE::ISieveVisitor::FilteredPointRetriever
point_type	include/sieve/ISieve.hh	/^      typedef typename Sieve::point_type point_type;$/;"	t	class:ALE::ISieveVisitor::PointRetriever
point_type	include/sieve/ISieve.hh	/^    typedef Point_                             point_type;$/;"	t	class:ALE::IFSieve
point_type	include/sieve/ISieve.hh	/^    typedef Point_            point_type;$/;"	t	class:ALE::Interval
point_type	include/sieve/ISieve.hh	/^    typedef typename Sieve::point_type point_type;$/;"	t	class:ALE::ISieveTraversal
point_type	include/sieve/Mesh.hh	/^      typedef typename sieve_type::point_type point_type;$/;"	t	class:ALE::IBundle::DepthVisitor
point_type	include/sieve/Mesh.hh	/^    typedef typename sieve_type::point_type                           point_type;$/;"	t	class:ALE::Bundle
point_type	include/sieve/Mesh.hh	/^    typedef typename sieve_type::point_type                           point_type;$/;"	t	class:ALE::IBundle
point_type	include/sieve/Mesh.hh	/^    typedef typename sieve_type::point_type           point_type;$/;"	t	class:ALE::IMesh
point_type	include/sieve/Mesh.hh	/^    typedef typename sieve_type::point_type           point_type;$/;"	t	class:ALE::Mesh
point_type	include/sieve/Numbering.hh	/^    typedef typename base_type::point_type point_type;$/;"	t	class:ALE::GlobalOrder
point_type	include/sieve/Numbering.hh	/^    typedef typename base_type::point_type point_type;$/;"	t	class:ALE::Numbering
point_type	include/sieve/Numbering.hh	/^    typedef typename bundle_type::point_type                point_type;$/;"	t	class:ALE::NumberingFactory
point_type	include/sieve/Overlap.hh	/^  typedef Point    point_type;$/;"	t	class:PETSc::Overlap
point_type	include/sieve/Overlap.hh	/^  typedef Point    point_type;$/;"	t	class:PETSc::RecvOverlap
point_type	include/sieve/Overlap.hh	/^  typedef Point    point_type;$/;"	t	class:PETSc::SendOverlap
point_type	include/sieve/ParallelMapping.hh	/^    typedef Point                           point_type;$/;"	t	class:ALE::PointFactory
point_type	include/sieve/Partitioner.hh	/^        typedef typename bundle_type::point_type point_type;$/;"	t	class:ALE::New::Chaco::Partitioner
point_type	include/sieve/Partitioner.hh	/^        typedef typename bundle_type::point_type point_type;$/;"	t	class:ALE::New::ParMetis::Partitioner
point_type	include/sieve/Partitioner.hh	/^        typedef typename bundle_type::point_type point_type;$/;"	t	class:ALE::New::Zoltan::Partitioner
point_type	include/sieve/Partitioner.hh	/^      typedef typename Mesh::point_type point_type;$/;"	t	class:ALE::Partitioner::FaceRecognizer
point_type	include/sieve/Partitioner.hh	/^      typedef typename Mesh::point_type point_type;$/;"	t	class:ALE::Partitioner::MeshManager
point_type	include/sieve/Partitioner.hh	/^      typedef typename Mesh::point_type point_type;$/;"	t	class:ALE::Partitioner::SimpleFaceRecognizer
point_type	include/sieve/Partitioner.hh	/^      typedef typename bundle_type::point_type point_type;$/;"	t	class:ALE::New::Partitioner
point_type	include/sieve/SectionCompletion.hh	/^      typedef int                                                                              point_type;$/;"	t	class:ALE::New::SectionCompletion
point_type	include/sieve/Sections.hh	/^      typedef Point_ point_type;$/;"	t	class:ALE::New::PartitionDomain
point_type	include/sieve/Sections.hh	/^      typedef typename bundle_type::point_type   point_type;$/;"	t	class:ALE::New::PartitionSection
point_type	include/sieve/Sections.hh	/^      typedef typename bundle_type::point_type point_type;$/;"	t	class:ALE::New::ConeSizeSection
point_type	include/sieve/Sections.hh	/^      typedef typename bundle_type::point_type point_type;$/;"	t	class:ALE::New::PartitionSizeSection
point_type	include/sieve/Sections.hh	/^      typedef typename section_type::point_type point_type;$/;"	t	class:ALE::New::SizeSection
point_type	include/sieve/Sections.hh	/^      typedef typename sieve_type::source_type point_type;$/;"	t	class:ALE::New::SupportSection
point_type	include/sieve/Sections.hh	/^      typedef typename sieve_type::source_type point_type;$/;"	t	class:ALE::New::SupportSizeSection
point_type	include/sieve/Sections.hh	/^      typedef typename sieve_type::target_type  point_type;$/;"	t	class:ALE::New::ArrowSection
point_type	include/sieve/Sections.hh	/^      typedef typename sieve_type::target_type point_type;$/;"	t	class:ALE::New::ConeSection
point_type	include/sieve/Sections.hh	/^    typedef typename sieve_type::target_type          point_type;$/;"	t	class:ALE::BaseSection
point_type	include/sieve/Sections.hh	/^    typedef typename sieve_type::target_type          point_type;$/;"	t	class:ALE::BaseSectionV
point_type	include/sieve/Sections.hh	/^    typedef typename sieve_type::target_type          point_type;$/;"	t	class:ALE::LabelBaseSection
point_type	include/sieve/Sections.hh	/^    typedef typename sieve_type::target_type          point_type;$/;"	t	class:ALE::LabelBaseSectionV
point_type	include/sieve/Sections.hh	/^    typedef typename sieve_type::target_type         point_type;$/;"	t	class:ALE::ConeSectionV
point_type	include/sieve/Sections.hh	/^    typedef typename sieve_type::target_type         point_type;$/;"	t	class:ALE::OrientedConeSectionV
point_type	include/sieve/Sections.hh	/^    typedef typename sieve_type::target_type        point_type;$/;"	t	class:ALE::ConeSection
point_type	include/sieve/Sections.hh	/^    typedef typename sieve_type::target_type     point_type;$/;"	t	class:ALE::ConeSizeSectionV
point_type	include/sieve/Sections.hh	/^    typedef typename sieve_type::target_type    point_type;$/;"	t	class:ALE::ConeSizeSection
point_type	include/sieve/Sections.hh	/^    typedef typename sieve_type::target_type    point_type;$/;"	t	class:ALE::LabelSection
point_type	include/sieve/Selection.hh	/^      typedef typename Sieve::point_type point_type;$/;"	t	class:ALE::Selection::FaceVisitor
point_type	include/sieve/Selection.hh	/^    typedef typename mesh_type::point_type       point_type;$/;"	t	class:ALE::Selection
point_type	include/sieve/Sieve.hh	/^        typedef Point_                                          point_type;$/;"	t	struct:ALE::Sieve::__anon9
point_type	include/sieve/Sieve.hh	/^      typedef Point_  point_type;$/;"	t	class:ALE::Sieve
point_type	include/sieve/Sieve.hh	/^      typedef Point_  point_type;$/;"	t	struct:ALE::SieveDef::Rec
point_type	include/sieve/SieveAlgorithms.hh	/^    typedef typename sieve_type::point_type          point_type;$/;"	t	class:ALE::SieveAlg
point_type	include/sieve/Sifter.hh	/^      typedef Point_ point_type;$/;"	t	struct:ALE::SifterDef::Rec
point_type	include/sieve/Topology.hh	/^    typedef typename sieve_type::point_type                       point_type;$/;"	t	class:ALE::Topology
point_type	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^  typedef mesh_type::point_type        point_type;$/;"	t	class:FunctionTestDistribution	file:
point_type	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  typedef mesh_type::point_type        point_type;$/;"	t	class:FunctionTestIDistribution	file:
point_type	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  typedef mesh_type::point_type point_type;$/;"	t	class:FunctionTestIMesh	file:
point_type	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  typedef mesh_type::point_type point_type;$/;"	t	class:MemoryTestIMesh	file:
point_type	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  typedef mesh_type::point_type point_type;$/;"	t	class:StressTestIMesh	file:
point_type	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^      typedef OverlapTest::topology_type::point_type point_type;$/;"	t	class:ALE::Test::SupportSizer
point_type	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^      typedef int                                                                   point_type;$/;"	t	class:ALE::Test::OverlapTest
point_type	src/dm/impls/mesh/examples/tests/section1.cxx	/^typedef ALE::Mesh::point_type        point_type;$/;"	t	file:
point_type	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^typedef int                              point_type;$/;"	t	file:
point_type	src/dm/impls/mesh/examples/tests/sifter1.cxx	/^typedef int                                      point_type;$/;"	t	file:
point_type	src/dm/impls/mesh/examples/tests/stl1.cxx	/^typedef int point_type;$/;"	t	file:
point_type	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^typedef ALE::Mesh::topology_type::point_type            point_type;$/;"	t	namespace:ALE::Hierarchy
pointer	include/sieve/ALE_containers.hh	/^      typedef value_type*                            pointer;$/;"	t	class:ALE::IndexSequence::iterator
pointer	include/sieve/ALE_mem.hh	/^    X* pointer() const {return objPtr;};$/;"	f	class:ALE::Obj
pointer	include/sieve/ALE_mem.hh	/^    typedef typename Alloc::pointer         pointer;$/;"	t	class:ALE::polymorphic_allocator
pointer	include/sieve/ALE_mem.hh	/^    typedef typename polymorphic_allocator<T>::pointer         pointer;$/;"	t	class:ALE::logged_allocator
pointer	include/sieve/ALE_mem.hh	/^    typedef value_type*       pointer;$/;"	t	class:ALE::malloc_allocator
pointer	include/sieve/ALE_mem.hh	/^    typedef void*       pointer;$/;"	t	class:ALE::malloc_allocator
pointer	include/sieve/CartesianSieve.hh	/^        typedef value_type*             pointer;$/;"	t	class:ALE::CartesianSieveDef::ConeSequence::iterator
pointer	include/sieve/CartesianSieve.hh	/^        typedef value_type*             pointer;$/;"	t	class:ALE::CartesianSieveDef::PointSequence::iterator
pointer	include/sieve/CartesianSieve.hh	/^        typedef value_type*             pointer;$/;"	t	class:ALE::CartesianSieveDef::SupportSequence::iterator
pointer	include/sieve/ISieve.hh	/^        typedef value_type*             pointer;$/;"	t	class:ALE::IFSieveDef::Sequence::const_iterator
pointer	include/sieve/LabelSifter.hh	/^        typedef typename iterator_base::pointer            pointer;$/;"	t	class:ALE::NewSifterDef::IndexSequenceTraits::iterator
pointer	include/sieve/LabelSifter.hh	/^        typedef typename iterator_base::pointer            pointer;$/;"	t	class:ALE::NewSifterDef::ReversibleIndexSequenceTraits::reverse_iterator
pointer	include/sieve/LabelSifter.hh	/^        typedef value_type*                            pointer;$/;"	t	class:ALE::NewSifterDef::IndexSequenceTraits::iterator_base
pointer	include/sieve/Overlap.hh	/^    typedef value_type* pointer;$/;"	t	class:PETSc::DualSequence::iterator
pointer	include/sieve/Sifter.hh	/^        typedef typename iterator_base::pointer            pointer;$/;"	t	class:ALE::SifterDef::IndexSequenceTraits::iterator
pointer	include/sieve/Sifter.hh	/^        typedef typename iterator_base::pointer            pointer;$/;"	t	class:ALE::SifterDef::ReversibleIndexSequenceTraits::reverse_iterator
pointer	include/sieve/Sifter.hh	/^        typedef value_type*                            pointer;$/;"	t	class:ALE::SifterDef::IndexSequenceTraits::iterator_base
pointpixel	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*pointpixel)(PetscDraw,PetscInt,PetscInt,int);$/;"	m	struct:_PetscDrawOps
points	include/petsc-private/dmpleximpl.h	/^  PetscInt *points;         \/* Points for each stratum, sorted after setup *\/$/;"	m	struct:_n_DMLabel
points	include/petsc-private/meshimpl.h	/^  PetscInt  *points;         \/* Points for each stratum, sorted after setup *\/$/;"	m	struct:Sieve_Label
points	include/petscdm.h	/^  PetscReal *points; \/* The input point coordinates *\/$/;"	m	struct:_DMInterpolationInfo
points	include/petscdmmesh.h	/^  PetscReal *points; \/* The input point coordinates *\/$/;"	m	struct:_DMMeshInterpolationInfo
points	include/sieve/ISieve.hh	/^      point_type          *points;$/;"	m	class:ALE::ISieveVisitor::PointRetriever
points	include/sieve/ISieve.hh	/^      point_type         *points;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
points	include/sieve/ISieve.hh	/^      point_type    *points;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
points	include/sieve/ISieve.hh	/^      point_type  *points;$/;"	m	class:ALE::ISieveVisitor::FilteredPointRetriever
points	include/sieve/Overlap.hh	/^    const first_type  *points;$/;"	m	class:PETSc::DualSequence::iterator
points	include/sieve/Overlap.hh	/^  point_type *points;            \/\/ [pointsOffset[numRanks]]: Points array for each partner process, in sorted order$/;"	m	class:PETSc::Overlap
pointsOffset	include/sieve/Overlap.hh	/^  index_type *pointsOffset;      \/\/ [numRanks+1]: Offset into points array for each partner process$/;"	m	class:PETSc::Overlap
points_alloc_type	include/sieve/Field.hh	/^    typedef typename alloc_type::template rebind<points_type>::other  points_alloc_type;$/;"	t	class:ALE::DiscreteSieve
points_ptr	include/sieve/Field.hh	/^    typedef typename points_alloc_type::pointer                       points_ptr;$/;"	t	class:ALE::DiscreteSieve
points_type	include/sieve/Field.hh	/^    typedef std::set<point_type, std::less<point_type>, alloc_type>   points_type;$/;"	t	class:ALE::DiscreteSieve
points_type	include/sieve/Sections.hh	/^      typedef std::map<marker_type, point_type*> points_type;$/;"	t	class:ALE::New::PartitionSection
pointsetsize	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*pointsetsize)(PetscDraw,PetscReal);$/;"	m	struct:_PetscDrawOps
pointwisedivide	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*pointwisedivide)(Vec,Vec,Vec);      \/* w = x .\/ y *\/$/;"	m	struct:_VecOps
pointwisemax	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*pointwisemax)(Vec,Vec,Vec);$/;"	m	struct:_VecOps
pointwisemaxabs	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*pointwisemaxabs)(Vec,Vec,Vec);$/;"	m	struct:_VecOps
pointwisemin	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*pointwisemin)(Vec,Vec,Vec);$/;"	m	struct:_VecOps
pointwisemult	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*pointwisemult)(Vec,Vec,Vec);        \/* w = x .* y *\/$/;"	m	struct:_VecOps
polymorphic_allocator	include/sieve/ALE_mem.hh	/^    polymorphic_allocator()                                    {};$/;"	f	class:ALE::polymorphic_allocator
polymorphic_allocator	include/sieve/ALE_mem.hh	/^    polymorphic_allocator(const polymorphic_allocator& a)      {};$/;"	f	class:ALE::polymorphic_allocator
polymorphic_allocator	include/sieve/ALE_mem.hh	/^    polymorphic_allocator(const polymorphic_allocator<TT>& aa){}$/;"	f	class:ALE::polymorphic_allocator
polymorphic_allocator	include/sieve/ALE_mem.hh	/^  class polymorphic_allocator {$/;"	c	namespace:ALE
pool_list	include/petscmat.h	/^  PetscCDArrNd pool_list;  \/* node pool *\/$/;"	m	struct:_PetscCoarsenData
pop	config/BuildSystem/config/setsBackport.py	/^    def pop(self):$/;"	m	class:Set
pop	config/BuildSystem/config/setsOrdered.py	/^    def pop(self):$/;"	m	class:Set
pop	include/petsclog.hh	/^    void pop() {$/;"	f	class:PETSc::LogStage
popLanguage	config/BuildSystem/config/base.py	/^  def popLanguage(self):$/;"	m	class:Configure
popRequiredFlags	config/BuildSystem/config/compile/processor.py	/^  def popRequiredFlags(self):$/;"	m	class:Processor
popen2	bin/portabilitycheck.py	/^import popen2$/;"	i
popen2	config/BuildSystem/script.py	/^      import popen2$/;"	i
popup	include/petsc-private/drawimpl.h	/^  PetscDraw       popup;$/;"	m	struct:_p_PetscDraw
port_xl	include/petsc-private/drawimpl.h	/^  PetscReal       port_xl,port_yl,port_xr,port_yr;$/;"	m	struct:_p_PetscDraw
port_xl	include/petscdraw.h	/^  PetscReal port_xl,port_yl,port_xr,port_yr;   \/* original port of parent PetscDraw *\/$/;"	m	struct:__anon15
port_xr	include/petsc-private/drawimpl.h	/^  PetscReal       port_xl,port_yl,port_xr,port_yr;$/;"	m	struct:_p_PetscDraw
port_xr	include/petscdraw.h	/^  PetscReal port_xl,port_yl,port_xr,port_yr;   \/* original port of parent PetscDraw *\/$/;"	m	struct:__anon15
port_yl	include/petsc-private/drawimpl.h	/^  PetscReal       port_xl,port_yl,port_xr,port_yr;$/;"	m	struct:_p_PetscDraw
port_yl	include/petscdraw.h	/^  PetscReal port_xl,port_yl,port_xr,port_yr;   \/* original port of parent PetscDraw *\/$/;"	m	struct:__anon15
port_yr	include/petsc-private/drawimpl.h	/^  PetscReal       port_xl,port_yl,port_xr,port_yr;$/;"	m	struct:_p_PetscDraw
port_yr	include/petscdraw.h	/^  PetscReal port_xl,port_yl,port_xr,port_yr;   \/* original port of parent PetscDraw *\/$/;"	m	struct:__anon15
portabilityCheck	bin/portabilitycheck.py	/^def portabilityCheck(filename,includes):$/;"	f
postInstall	config/BuildSystem/config/package.py	/^  def postInstall(self, output, mkfile):$/;"	m	class:Package
postProcess	config/PETSc/packages/ctetgen.py	/^  def postProcess(self):$/;"	m	class:Configure
postProcessPackages	config/PETSc/Configure.py	/^  def postProcessPackages(self):$/;"	m	class:Configure
postcheck	include/petsc-private/linesearchimpl.h	/^  PetscErrorCode (*postcheck)(SNESLineSearch,Vec,Vec,Vec,PetscBool *,PetscBool *,void*);$/;"	m	struct:_LineSearchOps
postcheckctx	include/petsc-private/linesearchimpl.h	/^  void *              postcheckctx;$/;"	m	struct:_p_LineSearch
postctx	include/petsc-private/kspimpl.h	/^  void           *prectx,*postctx;$/;"	m	struct:_p_KSP
postsolve	include/petsc-private/kspimpl.h	/^  PetscErrorCode (*postsolve)(KSP,Vec,Vec,void*);$/;"	m	struct:_p_KSP
postsolve	include/petsc-private/pcimpl.h	/^  PetscErrorCode (*postsolve)(PC,KSP,Vec,Vec);$/;"	m	struct:_PCOps
poststep	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*poststep)(TS);$/;"	m	struct:_p_TS
pprefix	include/petscoptions.h	/^  char             *prefix,*pprefix;$/;"	m	struct:__anon35
preallocCenterDim	include/petsc-private/dmpleximpl.h	/^  PetscInt             preallocCenterDim; \/* Dimension of the points which connect adjacent points for preallocation *\/$/;"	m	struct:__anon30
prealloc_only	include/petsc-private/dmdaimpl.h	/^  PetscBool             prealloc_only;$/;"	m	struct:__anon23
prealloc_only	include/petsc-private/dmimpl.h	/^  PetscBool               prealloc_only; \/* Flag indicating the DMCreateMatrix() should only preallocate, not fill the matrix *\/$/;"	m	struct:_p_DM
preallocateOperator	include/petscdmmesh.hh	/^PetscErrorCode preallocateOperator(const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar> >& mesh, const int bs, const ALE::Obj<Atlas>& atlas, const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar>::order_type>& globalOrder, PetscInt dnz[], PetscInt onz[], Mat A)$/;"	f
preallocateOperator	include/petscdmmesh.hh	/^PetscErrorCode preallocateOperator(const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar> >& mesh, const int bs, const ALE::Obj<Atlas>& rowAtlas, const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar>::order_type>& rowGlobalOrder, const ALE::Obj<Atlas>& colAtlas, const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar>::order_type>& colGlobalOrder, Mat A)$/;"	f
preallocateOperator	include/petscdmmesh.hh	/^PetscErrorCode preallocateOperator(const ALE::Obj<Mesh>& mesh, const int bs, const ALE::Obj<Atlas>& atlas, const ALE::Obj<typename Mesh::order_type>& globalOrder, PetscInt dnz[], PetscInt onz[], Mat A)$/;"	f
preallocateOperatorI	include/petscdmmesh.hh	/^PetscErrorCode preallocateOperatorI(const ALE::Obj<Mesh>& mesh, const int bs, const ALE::Obj<Atlas>& atlas, const ALE::Obj<typename Mesh::order_type>& globalOrder, PetscInt dnz[], PetscInt onz[], PetscBool  isSymmetric, Mat A)$/;"	f
preallocateOperatorNew	include/petscdmmesh.hh	/^PetscErrorCode preallocateOperatorNew(const ALE::Obj<Mesh>& mesh, const int bs, const ALE::Obj<Atlas>& atlas, const ALE::Obj<typename Mesh::order_type>& globalOrder, PetscInt dnz[], PetscInt onz[], PetscBool  isSymmetric, Mat A, bool fillMatrix = false)$/;"	f
preallocateOperatorNewOverlap	include/petscdmmesh.hh	/^PetscErrorCode preallocateOperatorNewOverlap(const ALE::Obj<Mesh>& mesh, const int bs, const ALE::Obj<Atlas>& atlas, const ALE::Obj<typename Mesh::order_type>& globalOrder, PetscInt dnz[], PetscInt onz[], PetscBool isSymmetric, Mat A, bool fillMatrix = false)$/;"	f
preallocated	include/petsc-private/matimpl.h	/^  PetscBool              preallocated;$/;"	m	struct:_p_Mat
preallocation	src/dm/impls/mesh/examples/tests/sieveTests.cxx	/^  PetscBool  preallocation; \/\/ Run the Preallocation tests$/;"	m	struct:__anon11	file:
precheck	include/petsc-private/linesearchimpl.h	/^  PetscErrorCode (*precheck)(SNESLineSearch,Vec,Vec,PetscBool*,void*);$/;"	m	struct:_LineSearchOps
precheck_picard_angle	include/petsc-private/linesearchimpl.h	/^  PetscReal           precheck_picard_angle;$/;"	m	struct:_p_LineSearch
precheck_picard_angle	include/petsc-private/snesimpl.h	/^  PetscReal precheck_picard_angle; \/* For use with SNESLineSearchPreCheckPicard *\/$/;"	m	struct:_p_SNES
precheckctx	include/petsc-private/linesearchimpl.h	/^  void *              precheckctx;$/;"	m	struct:_p_LineSearch
precision	include/petsc-private/petscimpl.h	/^  PetscPrecision       precision;$/;"	m	struct:_p_PetscObject
prectx	include/petsc-private/kspimpl.h	/^  void           *prectx,*postctx;$/;"	m	struct:_p_KSP
predicate	config/BuildSystem/config/setsBackport.py	/^            def predicate(x):$/;"	f	function:ifilter
predicate	config/BuildSystem/config/setsBackport.py	/^            def predicate(x):$/;"	f	function:ifilterfalse
predicate	config/BuildSystem/config/setsOrdered.py	/^            def predicate(x):$/;"	f	function:ifilter
predicate	config/BuildSystem/config/setsOrdered.py	/^            def predicate(x):$/;"	f	function:ifilterfalse
prefix	config/BuildSystem/maker.py	/^  prefix = property(getPrefix, setPrefix, doc = 'The installation root')$/;"	v	class:Make
prefix	include/petsc-private/petscimpl.h	/^  char                 *prefix;$/;"	m	struct:_p_PetscObject
prefix	include/petscoptions.h	/^  char             *prefix,*pprefix;$/;"	m	struct:__anon35
prefix	include/sieve/ALE_containers.hh	/^    prefix_type prefix;$/;"	m	class:ALE::Point
prefixSum	include/sieve/ISieve.hh	/^    void prefixSum(const offsets_type array) {$/;"	f	class:ALE::IFSieve
prefix_type	include/sieve/ALE_containers.hh	/^    typedef int32_t prefix_type;$/;"	t	class:ALE::Point
prependGraph	config/BuildSystem/build/buildGraph.py	/^  def prependGraph(self, graph):$/;"	m	class:BuildGraph
prependGraph	config/BuildSystem/graph.py	/^  def prependGraph(self, graph):$/;"	m	class:DirectedGraph
preprocess	config/BuildSystem/config/base.py	/^  def preprocess(self, codeStr, timeout = 600.0):$/;"	m	class:Configure
presolve	include/petsc-private/kspimpl.h	/^  PetscErrorCode (*presolve)(KSP,Vec,Vec,void*);$/;"	m	struct:_p_KSP
presolve	include/petsc-private/pcimpl.h	/^  PetscErrorCode (*presolve)(PC,KSP,Vec,Vec);$/;"	m	struct:_PCOps
presolvedone	include/petsc-private/pcimpl.h	/^  PetscInt       presolvedone;  \/* has PCPreSolve() already been run *\/$/;"	m	struct:_p_PC
prestage	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*prestage)(TS,PetscReal);$/;"	m	struct:_p_TS
prestep	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*prestep)(TS);$/;"	m	struct:_p_TS
printBanner	config/BuildSystem/help.py	/^  def printBanner(self, f):$/;"	m	class:Info
printElement	src/dm/impls/mesh/examples/tests/meshTest.hh	/^      static std::string printElement(const ALE::Mesh::real_section_type::point_type& e, const int dim, const value_type coords[], const int rank = -1) {$/;"	f	class:ALE::Test::MeshProcessor
printEnvVariables	config/BuildSystem/config/setCompilers.py	/^  def printEnvVariables(self):$/;"	m	class:Configure
printFEM	include/petsc-private/dmpleximpl.h	/^  PetscInt             printFEM;$/;"	m	struct:__anon30
printIndent	config/BuildSystem/build/buildGraph.py	/^  def printIndent(self, indent):$/;"	m	class:BuildGraph
printIndent	config/BuildSystem/graph.py	/^  def printIndent(self, indent):$/;"	m	class:DirectedGraph
printMatrix	include/sieve/Mesh.hh	/^    static std::string printMatrix(const std::string& name, const int rows, const int cols, const value_type matrix[], const int rank = -1)$/;"	f	class:ALE::Mesh
printSetValues	include/petsc-private/dmpleximpl.h	/^  PetscBool            printSetValues;$/;"	m	struct:__anon30
printSummary	config/BuildSystem/config/framework.py	/^  def printSummary(self):$/;"	m	class:Framework
printhelp	include/petscoptions.h	/^  PetscBool        printhelp,changedmethod,alreadyprinted;$/;"	m	struct:__anon35
printreason	include/petsc-private/kspimpl.h	/^  PetscBool          printreason;     \/* prints converged reason after solve *\/$/;"	m	struct:_p_KSP
printreason	include/petsc-private/snesimpl.h	/^  PetscBool   printreason;        \/* print reason for convergence\/divergence after each solve *\/$/;"	m	struct:_p_SNES
problem_type	include/petsc-private/tsimpl.h	/^  TSProblemType problem_type;$/;"	m	struct:_p_TS
proc	include/petsc-private/characteristicimpl.h	/^  int           proc; \/* Relative processor from which data is required (mapped to absolute by neighbors) *\/$/;"	m	struct:_p_Item
process	bin/processSummary.py	/^  def process(self, inF, outF):$/;"	m	class:LogSummarizer
processAlternatePrefixes	config/BuildSystem/nargs.py	/^  def processAlternatePrefixes(argList):$/;"	m	class:Arg
processAlternatePrefixes	config/BuildSystem/nargs.py	/^  processAlternatePrefixes = staticmethod(processAlternatePrefixes)$/;"	v	class:Arg
processArray	include/sieve/ISieve.hh	/^      void processArray() {$/;"	f	class:ALE::ISieveVisitor::RestrictVecVisitor
processFile	config/BuildSystem/build/compile/SIDL.py	/^  def processFile(self, source, set):$/;"	m	class:Compiler
processFile	config/BuildSystem/build/processor.py	/^  def processFile(self, f, set):$/;"	m	class:Processor
processFile	config/BuildSystem/build/processor.py	/^  def processFile(self, source, set):$/;"	m	class:Compiler
processFile	config/BuildSystem/build/processor.py	/^  def processFile(self, source, set):$/;"	m	class:Linker
processFileModule	config/BuildSystem/build/compile/SIDL.py	/^  def processFileModule(self, source, set):$/;"	m	class:Compiler
processFileSet	config/BuildSystem/build/compile/SIDL.py	/^  def processFileSet(self, set):$/;"	m	class:Compiler
processFileSet	config/BuildSystem/build/processor.py	/^  def processFileSet(self, set):$/;"	m	class:Compiler
processFileSet	config/BuildSystem/build/processor.py	/^  def processFileSet(self, set):$/;"	m	class:DirectoryArchiver
processFileSet	config/BuildSystem/build/processor.py	/^  def processFileSet(self, set):$/;"	m	class:ImportSharedLinker
processFileSet	config/BuildSystem/build/processor.py	/^  def processFileSet(self, set):$/;"	m	class:Linker
processFileSet	config/BuildSystem/build/processor.py	/^  def processFileSet(self, set):$/;"	m	class:Processor
processFileSetModule	config/BuildSystem/build/compile/SIDL.py	/^  def processFileSetModule(self, set):$/;"	m	class:Compiler
processFileSetShell	config/BuildSystem/build/compile/SIDL.py	/^  def processFileSetShell(self, set):$/;"	m	class:Compiler
processFileShell	config/BuildSystem/build/compile/SIDL.py	/^  def processFileShell(self, source, set):$/;"	m	class:Compiler
processInput	config/BuildSystem/build/builder.py	/^  def processInput(self, input):$/;"	m	class:Builder
processOldFile	config/BuildSystem/build/compile/SIDL.py	/^  def processOldFile(self, source, set):$/;"	m	class:Compiler
processOldFile	config/BuildSystem/build/processor.py	/^  def processOldFile(self, f, set):$/;"	m	class:Archiver
processOldFile	config/BuildSystem/build/processor.py	/^  def processOldFile(self, f, set):$/;"	m	class:Compiler
processOldFile	config/BuildSystem/build/processor.py	/^  def processOldFile(self, f, set):$/;"	m	class:DirectoryArchiver
processOldFile	config/BuildSystem/build/processor.py	/^  def processOldFile(self, f, set):$/;"	m	class:ImportSharedLinker
processOldFile	config/BuildSystem/build/processor.py	/^  def processOldFile(self, f, set):$/;"	m	class:Linker
processOldFile	config/BuildSystem/build/processor.py	/^  def processOldFile(self, f, set):$/;"	m	class:Processor
processOldFileSet	config/BuildSystem/build/compile/SIDL.py	/^  def processOldFileSet(self, set):$/;"	m	class:Compiler
processOldFileSet	config/BuildSystem/build/processor.py	/^  def processOldFileSet(self, set):$/;"	m	class:Processor
processOptions	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^  PetscErrorCode processOptions() {$/;"	f	class:FunctionTestDistribution
processOptions	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  PetscErrorCode processOptions() {$/;"	f	class:FunctionTestIDistribution
processOptions	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  PetscErrorCode processOptions() {$/;"	f	class:FunctionTestIMesh
processOptions	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  PetscErrorCode processOptions() {$/;"	f	class:MemoryTestIMesh
processOptions	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  PetscErrorCode processOptions() {$/;"	f	class:StressTestIMesh
processOptions	src/dm/impls/mesh/examples/tests/isection1.cxx	/^  PetscErrorCode processOptions() {$/;"	f	class:StressTestSection
processOptions	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  PetscErrorCode processOptions() {$/;"	f	class:FunctionTestISieve
processOptions	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  PetscErrorCode processOptions() {$/;"	f	class:MemoryTestISieve
processOptions	src/dm/impls/mesh/examples/tests/section1.cxx	/^  PetscErrorCode processOptions() {$/;"	f	class:StressTestGeneralMeshSection
processOptions	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  PetscErrorCode processOptions() {$/;"	f	class:FunctionTestHatSieve
processOptions	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  PetscErrorCode processOptions() {$/;"	f	class:StressTestCubeSieve
processOptions	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  PetscErrorCode processOptions() {$/;"	f	class:StressTestHatSieve
processOptions	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  PetscErrorCode processOptions() {$/;"	f	class:StressTestSquareSieve
processed	include/sieve/ISieve.hh	/^      bool               processed;$/;"	m	class:ALE::ISieveVisitor::RestrictVecVisitor
processf90interfaces	config/builder.py	/^   from generatefortranstubs import main, processf90interfaces$/;"	i
processor	config/BuildSystem/build/compile/C.py	/^import build.processor$/;"	i
processor	config/BuildSystem/build/compile/Cxx.py	/^import build.processor$/;"	i
processor	config/BuildSystem/build/compile/F90.py	/^import build.processor$/;"	i
processor	config/BuildSystem/build/compile/SIDL.py	/^import build.processor$/;"	i
processor	config/BuildSystem/build/processor.py	/^  processor = property(getProcessor, Processor.setProcessor, doc = 'This is the executable which will process files')$/;"	v	class:Linker
processor	config/BuildSystem/build/processor.py	/^  processor = property(getProcessor, setProcessor, doc = 'This is the executable which will process files')$/;"	v	class:Processor
processor	config/BuildSystem/build/templates/usingCxx.py	/^import build.processor$/;"	i
processor	config/BuildSystem/build/templates/usingPython.py	/^import build.processor$/;"	i
processor	config/BuildSystem/config/compile/C.py	/^import config.compile.processor$/;"	i
processor	config/BuildSystem/config/compile/CUDA.py	/^import config.compile.processor$/;"	i
processor	config/BuildSystem/config/compile/Cxx.py	/^import config.compile.processor$/;"	i
processor	config/BuildSystem/config/compile/FC.py	/^import config.compile.processor$/;"	i
procs	include/petsc-private/vecimpl.h	/^  PetscMPIInt            *procs;   \/* processors we are communicating with in scatter *\/$/;"	m	struct:__anon29
project	config/BuildSystem/RDict.py	/^  import project          # This is necessary for us to create Project objects on load$/;"	i
project	config/BuildSystem/build/framework.py	/^    import project$/;"	i
project	config/BuildSystem/build/templates/Compile.py	/^import project$/;"	i
project	config/BuildSystem/build/templates/SIDL.py	/^import project$/;"	i
project	config/BuildSystem/build/templates/usingCxx.py	/^import project$/;"	i
project	config/BuildSystem/build/templates/usingPython.py	/^import project$/;"	i
project	config/BuildSystem/build/templates/usingSIDL.py	/^import project$/;"	i
project	config/BuildSystem/getsplicers.py	/^import project$/;"	i
project	config/BuildSystem/make.py	/^import project$/;"	i
project	config/BuildSystem/maker.py	/^    import project$/;"	i
project	config/BuildSystem/pythonpath.py	/^import project$/;"	i
project	config/BuildSystem/sidldllpath.py	/^import project$/;"	i
projectRoot	config/BuildSystem/build/fileset.py	/^  projectRoot = property(getProjectRoot, setProjectRoot, doc = 'The project root for all files in the set')$/;"	v	class:RootedFileSet
projectUrl	config/BuildSystem/build/fileset.py	/^  projectUrl = property(getProjectUrl, setProjectUrl, doc = 'The URL of the project which provides a root for all files in the set')$/;"	v	class:RootedFileSet
prolongation	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^Obj<topology_type::patch_label_type> prolongation;        \/\/The name of the triangle in the next level up where the given meshed-over point lives (build prolongation operators out of these)$/;"	m	class:ALE::Hierarchy::HierarchyBuilder
ptap	include/petsc-private/matimpl.h	/^  PetscErrorCode (*ptap)(Mat,Mat,MatReuse,PetscReal,Mat*);$/;"	m	struct:_MatOps
ptapnumeric	include/petsc-private/matimpl.h	/^  PetscErrorCode (*ptapnumeric)(Mat,Mat,Mat);             \/* double dispatch wrapper routine *\/$/;"	m	struct:_MatOps
ptapsymbolic	include/petsc-private/matimpl.h	/^  PetscErrorCode (*ptapsymbolic)(Mat,Mat,PetscReal,Mat*); \/* double dispatch wrapper routine *\/$/;"	m	struct:_MatOps
ptime	include/petsc-private/tsimpl.h	/^  PetscReal ptime;                  \/* time at the start of the current step (stage time is internal if it exists) *\/$/;"	m	struct:_p_TS
ptr	include/sieve/ALE_mem.hh	/^    X* ptr() const     {return objPtr;};$/;"	f	class:ALE::Obj
publishoptions	include/petsc-private/kspimpl.h	/^  PetscErrorCode (*publishoptions)(KSP);$/;"	m	struct:_KSPOps
pull	config/BuildSystem/sourceControl.py	/^  def pull(self, parent = None):$/;"	m	class:BitKeeper
pull	config/BuildSystem/sourceControl.py	/^  def pull(self, parent = None):$/;"	m	class:VersionControl
purge	config/builder2.py	/^def purge(args):$/;"	f
push	config/BuildSystem/sourceControl.py	/^  def push(self, parent = None):$/;"	m	class:BitKeeper
push	config/BuildSystem/sourceControl.py	/^  def push(self, parent = None):$/;"	m	class:VersionControl
push	include/petsclog.hh	/^    void push() {$/;"	f	class:PETSc::LogStage
pushLanguage	config/BuildSystem/config/base.py	/^  def pushLanguage(self, language):$/;"	m	class:Configure
pushRequiredFlags	config/BuildSystem/config/compile/processor.py	/^  def pushRequiredFlags(self, flags):$/;"	m	class:Processor
pv	include/petsc-private/matimpl.h	/^  PetscScalar    pv;  \/* pivot of the active row *\/$/;"	m	struct:__anon4
pwd	config/BuildSystem/config/programs.py	/^        import pwd$/;"	i
pwd	config/BuildSystem/emacsclient.py	/^import pwd$/;"	i
pyjd	include/web/AMS.py	/^import pyjd$/;"	i
pyjd	include/web/AMSOptions.py	/^import pyjd$/;"	i
pyjd	include/web/AMSSnoopObjects.py	/^import pyjd$/;"	i
pyjd	include/web/AMSSnoopStack.py	/^import pyjd$/;"	i
python	config/builder.py	/^from __future__ import with_statement  # For python-2.5$/;"	i
python_context	include/petsc-private/petscimpl.h	/^  void                 *python_context;$/;"	m	struct:_p_PetscObject
python_destroy	include/petsc-private/petscimpl.h	/^  PetscErrorCode       (*python_destroy)(void*);$/;"	m	struct:_p_PetscObject
qlist	include/petsc-private/petscimpl.h	/^  PetscFunctionList    qlist;$/;"	m	struct:_p_PetscObject
quad	include/petscdm.h	/^  PetscQuadrature *quad;$/;"	m	struct:__anon20
quadBd	include/petscdm.h	/^  PetscQuadrature *quadBd;$/;"	m	struct:__anon20
quadPoints	include/petscdm.h	/^  const PetscReal *quadPoints;    \/* The quadrature point coordinates *\/$/;"	m	struct:__anon19
quadWeights	include/petscdm.h	/^  const PetscReal *quadWeights;   \/* The quadrature weights *\/$/;"	m	struct:__anon19
quadratic_xx	src/dm/impls/plex/examples/tests/ex3.c	/^void quadratic_xx(const PetscReal coords[], PetscScalar *u)$/;"	f
quadratic_xy	src/dm/impls/plex/examples/tests/ex3.c	/^void quadratic_xy(const PetscReal coords[], PetscScalar *u)$/;"	f
quadratic_yz	src/dm/impls/plex/examples/tests/ex3.c	/^void quadratic_yz(const PetscReal coords[], PetscScalar *u)$/;"	f
quadratic_zx	src/dm/impls/plex/examples/tests/ex3.c	/^void quadratic_zx(const PetscReal coords[], PetscScalar *u)$/;"	f
quadrature	config/BuildSystem/config/packages/fiat.py	/^        import FIAT.quadrature$/;"	i
quadrature	config/PETSc/FEM.py	/^    import FIAT.quadrature$/;"	i
query	include/petsc-private/petscimpl.h	/^   PetscErrorCode (*query)(PetscObject,const char[],PetscObject *);$/;"	m	struct:__anon11
queryfunction	include/petsc-private/petscimpl.h	/^   PetscErrorCode (*queryfunction)(PetscObject,const char[],void (**)(void));$/;"	m	struct:__anon11
queue	include/petsc-private/characteristicimpl.h	/^  Queue        queue;$/;"	m	struct:_p_Characteristic
queueLocal	include/petsc-private/characteristicimpl.h	/^  Queue        queueLocal;      \/* Queue of Items to receive from other processes *\/$/;"	m	struct:_p_Characteristic
queueLocalMax	include/petsc-private/characteristicimpl.h	/^  PetscInt     queueLocalMax;$/;"	m	struct:_p_Characteristic
queueLocalSize	include/petsc-private/characteristicimpl.h	/^  PetscInt     queueLocalSize;$/;"	m	struct:_p_Characteristic
queueMax	include/petsc-private/characteristicimpl.h	/^  PetscInt     queueMax;$/;"	m	struct:_p_Characteristic
queueRemote	include/petsc-private/characteristicimpl.h	/^  Queue        queueRemote;     \/* Queue of Items to send to other processes *\/$/;"	m	struct:_p_Characteristic
queueRemoteMax	include/petsc-private/characteristicimpl.h	/^  PetscInt     queueRemoteMax;$/;"	m	struct:_p_Characteristic
queueRemoteSize	include/petsc-private/characteristicimpl.h	/^  PetscInt     queueRemoteSize;$/;"	m	struct:_p_Characteristic
queueSize	include/petsc-private/characteristicimpl.h	/^  PetscInt     queueSize;$/;"	m	struct:_p_Characteristic
quoteIfNeeded	config/cmakeboot.py	/^def quoteIfNeeded(path):$/;"	f
r_factor	src/dm/impls/mesh/examples/tutorials/ex_coarsen.h	/^double c_factor, r_factor;$/;"	v
range	include/petscis.h	/^  PetscInt               *range;      \/* the offset of each processor *\/$/;"	m	struct:_n_PetscLayout
range	src/dm/impls/moab/dmmoab.cxx	/^  moab::Range range;$/;"	m	struct:__anon1	file:
range	src/dm/impls/moab/examples/tests/ex1.cxx	/^  moab::Range range;$/;"	m	class:AppCtx	file:
rank	include/petsc-private/matimpl.h	/^  PetscMPIInt   size,rank;$/;"	m	struct:__anon1
rank	include/petsc-private/vecimpl.h	/^  PetscMPIInt   size,rank;$/;"	m	struct:__anon24
rank	include/petscsf.h	/^  PetscInt rank;                \/* Rank of owner *\/$/;"	m	struct:__anon6
rank	include/sieve/ALE_mem.hh	/^    int      rank;$/;"	m	class:ALE::MemoryLogger
rank	include/sieve/ISieve.hh	/^      const int      rank;$/;"	m	class:ALE::ISieveVisitor::PrintVisitor
rank	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^  PetscInt   rank;$/;"	m	struct:__anon14	file:
rank	src/dm/impls/mesh/examples/tests/ex1.c	/^  PetscMPIInt   rank;              \/* The process rank *\/$/;"	m	struct:__anon16	file:
rank	src/dm/impls/mesh/examples/tests/ex2.c	/^  PetscMPIInt   rank;              \/* The process rank *\/$/;"	m	struct:__anon17	file:
rank	src/dm/impls/mesh/examples/tests/ex3.c	/^  PetscMPIInt   rank;              \/* The process rank *\/$/;"	m	struct:__anon15	file:
rank	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^  PetscInt   rank;$/;"	m	struct:__anon5	file:
rank	src/dm/impls/mesh/examples/tests/sieveTests.cxx	/^  PetscInt   rank;$/;"	m	struct:__anon11	file:
rank_type	include/sieve/Completion.hh	/^      typedef typename bundle_type::rank_type                                             rank_type;$/;"	t	class:ALE::New::Completion
rank_type	include/sieve/Distribution.hh	/^    typedef typename Partitioner::part_type               rank_type;$/;"	t	class:ALE::DistributionNew
rank_type	include/sieve/Mesh.hh	/^    typedef typename ALE::Partitioner<>::part_type                    rank_type;$/;"	t	class:ALE::Bundle
rank_type	include/sieve/Mesh.hh	/^    typedef typename ALE::Partitioner<>::part_type                    rank_type;$/;"	t	class:ALE::IBundle
rank_type	include/sieve/Numbering.hh	/^    typedef typename bundle_type::rank_type                 rank_type;$/;"	t	class:ALE::NumberingFactory
rank_type	include/sieve/Overlap.hh	/^  typedef Rank     rank_type;$/;"	t	class:PETSc::Overlap
rank_type	include/sieve/Overlap.hh	/^  typedef Rank     rank_type;$/;"	t	class:PETSc::RecvOverlap
rank_type	include/sieve/Overlap.hh	/^  typedef Rank     rank_type;$/;"	t	class:PETSc::SendOverlap
rank_type	include/sieve/SectionCompletion.hh	/^      typedef short int                                                                        rank_type;$/;"	t	class:ALE::New::SectionCompletion
rankorder	include/petsc-private/sfimpl.h	/^  PetscBool       rankorder;    \/* Sort ranks for gather and scatter operations *\/$/;"	m	struct:_p_PetscSF
ranks	include/petsc-private/sfimpl.h	/^  PetscMPIInt     *ranks;       \/* List of ranks referenced by "remote" *\/$/;"	m	struct:_p_PetscSF
ranks	include/sieve/Overlap.hh	/^  rank_type  *ranks;             \/\/ [numRanks]:   MPI Rank of each partner process$/;"	m	class:PETSc::Overlap
ranlib	config/builder.py	/^ def ranlib(self, library):$/;"	m	class:PETScMaker
rart	include/petsc-private/matimpl.h	/^  PetscErrorCode (*rart)(Mat,Mat,MatReuse,PetscReal,Mat*);$/;"	m	struct:_MatOps
rartnumeric	include/petsc-private/matimpl.h	/^  PetscErrorCode (*rartnumeric)(Mat,Mat,Mat);             \/* double dispatch wrapper routine *\/$/;"	m	struct:_MatOps
rartsymbolic	include/petsc-private/matimpl.h	/^  PetscErrorCode (*rartsymbolic)(Mat,Mat,PetscReal,Mat*); \/* double dispatch wrapper routine *\/$/;"	m	struct:_MatOps
ray	include/petscts.h	/^  Vec         ray;$/;"	m	struct:__anon70
rbegin	include/sieve/LabelSifter.hh	/^        virtual reverse_iterator rbegin() {$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
rbegin	include/sieve/Sifter.hh	/^        virtual reverse_iterator rbegin() {$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
rdict	config/BuildSystem/RDict.py	/^      rdict     = RDict(parentDirectory = '.')$/;"	v	class:RDict.serve.ProcessHandler
re	bin/petscnagupgrade.py	/^import re$/;"	i
re	bin/portabilitycheck.py	/^import re$/;"	i
re	bin/pythonscripts/PetscStaticFunctionCandidates.py	/^import re$/;"	i
re	bin/update.py	/^  import re$/;"	i
re	bin/update.py	/^import re$/;"	i
re	config/BuildSystem/build/bk.py	/^    import re$/;"	i
re	config/BuildSystem/build/framework.py	/^    import re$/;"	i
re	config/BuildSystem/config/autoconf.py	/^import re$/;"	i
re	config/BuildSystem/config/base.py	/^      import re$/;"	i
re	config/BuildSystem/config/compile/SIDL.py	/^    import re$/;"	i
re	config/BuildSystem/config/compilerFlags.py	/^import re$/;"	i
re	config/BuildSystem/config/compilerOptions.py	/^import re$/;"	i
re	config/BuildSystem/config/compilers.py	/^import re$/;"	i
re	config/BuildSystem/config/framework.py	/^import re$/;"	i
re	config/BuildSystem/config/libraries.py	/^import re$/;"	i
re	config/BuildSystem/config/packages/MPI.py	/^    import re$/;"	i
re	config/BuildSystem/config/packages/PETSc.py	/^import re$/;"	i
re	config/BuildSystem/config/programs.py	/^            import re$/;"	i
re	config/BuildSystem/config/setCompilers.py	/^      import re$/;"	i
re	config/BuildSystem/config/types.py	/^import re$/;"	i
re	config/BuildSystem/getsplicers.py	/^import re$/;"	i
re	config/BuildSystem/maker.py	/^    import re$/;"	i
re	config/BuildSystem/nargs.py	/^      import re$/;"	i
re	config/BuildSystem/patch.py	/^import re$/;"	i
re	config/BuildSystem/script.py	/^      import re$/;"	i
re	config/BuildSystem/setsplicers.py	/^import re$/;"	i
re	config/BuildSystem/sourceDatabase.py	/^import re$/;"	i
re	config/PETSc/Configure.py	/^import re$/;"	i
re	config/PETSc/package.py	/^import re$/;"	i
re	config/PETSc/packages/Matlab.py	/^    import re$/;"	i
re	config/PETSc/petsc.py	/^import re$/;"	i
re	config/PETSc/utilities/arch.py	/^import re$/;"	i
re	config/PETSc/utilities/dataFilesPath.py	/^import re$/;"	i
re	config/PETSc/utilities/debuggers.py	/^      import re$/;"	i
re	config/PETSc/utilities/getResidentSetSize.py	/^import re$/;"	i
re	config/PETSc/utilities/petscdir.py	/^import re$/;"	i
re	config/builder.py	/^    import re$/;"	i
re	config/builder.py	/^   import re$/;"	i
re	config/cmakeboot.py	/^   import re$/;"	i
re	config/install.py	/^import re, os, sys, shutil$/;"	i
re	src/dm/impls/mesh/examples/tests/memoryParse.py	/^  import re$/;"	i
readBinaryFile	bin/pythonscripts/PetscBinaryIO.py	/^    def readBinaryFile(self, fid, mattype='sparse'):$/;"	m	class:PetscBinaryIO
readDependencyFile	config/builder.py	/^  def readDependencyFile(self, dirname, source, depFile):$/;"	m	class:DependencyBuilder
readIS	bin/pythonscripts/PetscBinaryIO.py	/^    def readIS(self, fh):$/;"	m	class:PetscBinaryIO
readMat	bin/pythonscripts/PetscBinaryIO.py	/^    def readMat(self, fh, mattype='sparse'):$/;"	m	class:PetscBinaryIO
readMatDense	bin/pythonscripts/PetscBinaryIO.py	/^    def readMatDense(self, fh):$/;"	m	class:PetscBinaryIO
readMatSciPy	bin/pythonscripts/PetscBinaryIO.py	/^    def readMatSciPy(self, fh):$/;"	m	class:PetscBinaryIO
readMatSparse	bin/pythonscripts/PetscBinaryIO.py	/^    def readMatSparse(self, fh):$/;"	m	class:PetscBinaryIO
readMesh	include/petscdmmesh_formats.hh	/^      static void readMesh(const Obj<PETSC_MESH_TYPE>& mesh, const std::string& filename) {$/;"	f	class:ALE::Dolfin::Builder
readMesh	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^  void readMesh(const char filename[], const int dim, const bool interpolate) {$/;"	f	class:FunctionTestDistribution
readMesh	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  void readMesh(const char filename[], const int dim, const bool interpolate) {$/;"	f	class:FunctionTestIDistribution
readTopology	src/dm/impls/mesh/examples/tests/sieveTest.hh	/^      static Obj<topology_type> readTopology(MPI_Comm comm, const int dim, const std::string& basename, const bool useZeroBase = true, const bool interpolate = true, const int debug = 0, const bool stratify = true) {$/;"	f	class:ALE::Test::TopologyBuilder
readVec	bin/pythonscripts/PetscBinaryIO.py	/^    def readVec(self, fh):$/;"	m	class:PetscBinaryIO
readftplines	bin/urlget.py	/^    def readftplines(self,buf1):$/;"	m	class:ftp_object
readline	config/BuildSystem/nargs.py	/^  import readline$/;"	i
readstdin	config/BuildSystem/patch.py	/^  readstdin = (sys.argv[-1:] == ['--'] and not args)$/;"	v	class:PatchSet
real	include/petscmath.h	/^  typedef struct {double real,imag;} petsc_mpiu_c_double_complex;$/;"	m	struct:__anon58
real	include/petscmath.h	/^  typedef struct {float real,imag;} petsc_mpiu_c_complex;$/;"	m	struct:__anon59
real	include/sieve/Mesh.hh	/^    typedef typename Mesh::real_section_type::value_type real;$/;"	t	class:ALE::MeshBuilder
real_idmax	include/petsc-private/petscimpl.h	/^  PetscInt             real_idmax,        realstar_idmax;$/;"	m	struct:_p_PetscObject
real_section_type	include/petscdmmesh_formats.hh	/^      typedef Mesh::real_section_type real_section_type;$/;"	t	class:ALE::PyLith::Builder
real_section_type	include/sieve/CartesianSieve.hh	/^    typedef Section<point_type, double>                               real_section_type;$/;"	t	class:ALE::CartesianBundle
real_section_type	include/sieve/Mesh.hh	/^    typedef RealSection_                                              real_section_type;$/;"	t	class:ALE::Bundle
real_section_type	include/sieve/Mesh.hh	/^    typedef RealSection_                                              real_section_type;$/;"	t	class:ALE::IBundle
real_section_type	include/sieve/Mesh.hh	/^    typedef typename base_type::real_section_type     real_section_type;$/;"	t	class:ALE::IMesh
real_section_type	include/sieve/Mesh.hh	/^    typedef typename base_type::real_section_type     real_section_type;$/;"	t	class:ALE::Mesh
real_section_type	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^  typedef mesh_type::real_section_type real_section_type;$/;"	t	class:FunctionTestDistribution	file:
real_section_type	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  typedef mesh_type::real_section_type real_section_type;$/;"	t	class:FunctionTestIDistribution	file:
real_section_type	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^typedef ALE::Mesh::real_section_type                    real_section_type;$/;"	t	namespace:ALE::Hierarchy
real_sections_type	include/sieve/CartesianSieve.hh	/^    typedef std::map<std::string, Obj<real_section_type> >            real_sections_type;$/;"	t	class:ALE::CartesianBundle
real_sections_type	include/sieve/Mesh.hh	/^    typedef std::map<std::string, Obj<real_section_type> >            real_sections_type;$/;"	t	class:ALE::Bundle
real_sections_type	include/sieve/Mesh.hh	/^    typedef std::map<std::string, Obj<real_section_type> >            real_sections_type;$/;"	t	class:ALE::IBundle
realcomposeddata	include/petsc-private/petscimpl.h	/^  PetscReal            *realcomposeddata, **realstarcomposeddata;$/;"	m	struct:_p_PetscObject
realcomposedstate	include/petsc-private/petscimpl.h	/^  PetscInt             *realcomposedstate,*realstarcomposedstate;$/;"	m	struct:_p_PetscObject
reallocate	include/sieve/ISieve.hh	/^    void reallocate() {$/;"	f	class:ALE::IFSieve
reallocate	include/sieve/Mesh.hh	/^    void reallocate(const Obj<Section_>& section) {$/;"	f	class:ALE::Bundle
reallocate	include/sieve/Mesh.hh	/^    void reallocate(const Obj<Section_>& section) {$/;"	f	class:ALE::IBundle
reallocatePoint	include/sieve/IField.hh	/^    bool reallocatePoint(const Iterator& begin, const Iterator& end, const Extractor& extractor) {$/;"	f	class:ALE::IUniformSection
reallocatePoint	include/sieve/IField.hh	/^    bool reallocatePoint(const chart_type& chart) {$/;"	f	class:ALE::IGeneralSection
reallocatePoint	include/sieve/IField.hh	/^    bool reallocatePoint(const chart_type& chart) {$/;"	f	class:ALE::ISection
reallocatePoint	include/sieve/IField.hh	/^    bool reallocatePoint(const chart_type& chart, values_type *oldData = NULL) {$/;"	f	class:ALE::IUniformSection
reallocs	include/petsc-private/matimpl.h	/^  PetscInt      reallocs;               \/* preserve the no of mallocs invoked *\/$/;"	m	struct:__anon1
reallocs	include/petsc-private/vecimpl.h	/^  PetscInt      reallocs;               \/* preserve the no of mallocs invoked *\/$/;"	m	struct:__anon24
realpart	include/petsc-private/matimpl.h	/^  PetscErrorCode (*realpart)(Mat);$/;"	m	struct:_MatOps
realstar_idmax	include/petsc-private/petscimpl.h	/^  PetscInt             real_idmax,        realstar_idmax;$/;"	m	struct:_p_PetscObject
realstarcomposeddata	include/petsc-private/petscimpl.h	/^  PetscReal            *realcomposeddata, **realstarcomposeddata;$/;"	m	struct:_p_PetscObject
realstarcomposedstate	include/petsc-private/petscimpl.h	/^  PetscInt             *realcomposedstate,*realstarcomposedstate;$/;"	m	struct:_p_PetscObject
reason	include/petsc-private/kspimpl.h	/^  KSPConvergedReason reason;$/;"	m	struct:_p_KSP
reason	include/petsc-private/snesimpl.h	/^  SNESConvergedReason reason;$/;"	m	struct:_p_SNES
reason	include/petsc-private/tsimpl.h	/^  TSConvergedReason reason;$/;"	m	struct:_p_TS
rebind	include/sieve/ALE_containers.hh	/^    struct rebind {$/;"	s	struct:ALE::Arrow
rebind	include/sieve/ALE_mem.hh	/^    struct rebind { typedef logged_allocator<TT> other;};$/;"	s	class:ALE::logged_allocator
rebind	include/sieve/ALE_mem.hh	/^    struct rebind { typedef polymorphic_allocator<TT> other;};$/;"	s	class:ALE::polymorphic_allocator
rebind	include/sieve/ALE_mem.hh	/^    struct rebind {typedef malloc_allocator<U> other;};$/;"	s	class:ALE::malloc_allocator
rebind	include/sieve/ISieve.hh	/^    struct rebind {$/;"	s	struct:ALE::SimpleArrow
rebind	include/sieve/LabelSifter.hh	/^      struct rebind {$/;"	s	struct:ALE::NewSifterDef::Arrow
rebind	include/sieve/LabelSifter.hh	/^    struct rebind {$/;"	s	class:ALE::LabelSifter
rebind	include/sieve/Sieve.hh	/^      struct rebind {$/;"	s	struct:ALE::SieveDef::Rec
rebind	include/sieve/Sieve.hh	/^      struct rebind {$/;"	s	struct:ALE::SieveDef::RecContainer
rebind	include/sieve/Sifter.hh	/^      struct rebind {$/;"	s	struct:ALE::SifterDef::Arrow
rebind	include/sieve/Sifter.hh	/^      struct rebind {$/;"	s	struct:ALE::SifterDef::Rec
rebind	include/sieve/Sifter.hh	/^      struct rebind {$/;"	s	struct:ALE::SifterDef::RecContainer
rebind	include/sieve/Sifter.hh	/^    struct rebind {$/;"	s	class:ALE::ASifter
rebind	include/sieve/Sifter.hh	/^    struct rebind {$/;"	s	class:ALE::Sifter
rebuild	config/builder.py	/^  def rebuild(self, vertex):$/;"	m	class:NullSourceDatabase
rebuild	config/builder.py	/^  def rebuild(self, vertex):$/;"	m	class:SourceDatabase
rebuild	config/builder.py	/^  def rebuild(self, vertex):$/;"	m	class:SourceDatabaseDict
rebuildArc	config/builder.py	/^  def rebuildArc(self, vertex, dep, mark):$/;"	m	class:SourceDatabase
rebuildArc	config/builder.py	/^  def rebuildArc(self, vertex, dep, mark):$/;"	m	class:SourceDatabaseDict
rebuildDependencies	config/builder.py	/^ def rebuildDependencies(self, libname, rootDir):$/;"	m	class:PETScMaker
rec_type	include/sieve/Sieve.hh	/^      typedef Rec_ rec_type;$/;"	t	struct:ALE::SieveDef::RecContainerTraits
rec_type	include/sieve/Sifter.hh	/^      typedef Rec_ rec_type;$/;"	t	struct:ALE::SifterDef::RecContainerTraits
recalculateLabel	include/sieve/ISieve.hh	/^    void recalculateLabel() {$/;"	f	class:ALE::IFSieve
recalculateLabel	include/sieve/LabelSifter.hh	/^    void recalculateLabel() {}$/;"	f	class:ALE::LabelSifter
reciprocal	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*reciprocal)(Vec);$/;"	m	struct:_VecOps
rectangle	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*rectangle)(PetscDraw,PetscReal,PetscReal,PetscReal,PetscReal,int,int,int,int);$/;"	m	struct:_PetscDrawOps
recv	include/sieve/BasicCommunication.hh	/^    void recv(const int rank, const int num, const value_type *data) {$/;"	f	class:ALE::MPIMover
recv	include/web/AMS.py	/^recv   = 0   # Number of calls received from server$/;"	v
recvPacket	config/BuildSystem/RDict.py	/^  def recvPacket(self, s, source = 'Unknown'):$/;"	m	class:RDict
recv_overlap_alloc_type	include/sieve/Topology.hh	/^    typedef typename alloc_type::template rebind<recv_overlap_type>::other   recv_overlap_alloc_type;$/;"	t	class:ALE::Topology
recv_overlap_ptr	include/sieve/Topology.hh	/^    typedef typename recv_overlap_alloc_type::pointer                        recv_overlap_ptr;$/;"	t	class:ALE::Topology
recv_overlap_type	include/sieve/CartesianSieve.hh	/^    typedef ALE::Sifter<point_type,int,point_type>                    recv_overlap_type;$/;"	t	class:ALE::CartesianBundle
recv_overlap_type	include/sieve/CartesianSieve.hh	/^    typedef CartesianBundle::recv_overlap_type recv_overlap_type;$/;"	t	class:ALE::CartesianMesh
recv_overlap_type	include/sieve/Completion.hh	/^      typedef typename ALE::Sifter<rank_type, point_type, point_type>                     recv_overlap_type;$/;"	t	class:ALE::New::Completion
recv_overlap_type	include/sieve/Distribution.hh	/^    typedef typename bundle_type::recv_overlap_type                                     recv_overlap_type;$/;"	t	class:ALE::Distribution
recv_overlap_type	include/sieve/INumbering.hh	/^    typedef typename bundle_type::recv_overlap_type                                              recv_overlap_type;$/;"	t	class:ALE::INumberingFactory
recv_overlap_type	include/sieve/Mesh.hh	/^    typedef typename ALE::Sifter<rank_type,point_type,point_type>     recv_overlap_type;$/;"	t	class:ALE::Bundle
recv_overlap_type	include/sieve/Mesh.hh	/^    typedef typename ALE::Sifter<rank_type,point_type,point_type>     recv_overlap_type;$/;"	t	class:ALE::IBundle
recv_overlap_type	include/sieve/Mesh.hh	/^    typedef typename PETSc::RecvOverlap<point_type,rank_type>         recv_overlap_type;$/;"	t	class:ALE::IBundle
recv_overlap_type	include/sieve/Mesh.hh	/^    typedef typename base_type::recv_overlap_type     recv_overlap_type;$/;"	t	class:ALE::IMesh
recv_overlap_type	include/sieve/Mesh.hh	/^    typedef typename base_type::recv_overlap_type     recv_overlap_type;$/;"	t	class:ALE::Mesh
recv_overlap_type	include/sieve/Numbering.hh	/^    typedef typename bundle_type::recv_overlap_type         recv_overlap_type;$/;"	t	class:ALE::NumberingFactory
recv_overlap_type	include/sieve/Topology.hh	/^    typedef typename ALE::Sifter<point_type,int,point_type>                  recv_overlap_type;$/;"	t	class:ALE::Topology
recv_overlap_type	src/dm/impls/mesh/examples/tests/overlap2.cxx	/^typedef ALE::Test::OverlapTest::recv_overlap_type recv_overlap_type;$/;"	t	file:
recv_overlap_type	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^      typedef ALE::Sifter<point_type,int,point_type>                                recv_overlap_type;$/;"	t	class:ALE::Test::OverlapTest
recv_overlap_type	src/dm/impls/mesh/examples/tests/sieve2-old.cxx	/^typedef sectionCompletion::recv_overlap_type                      recv_overlap_type;$/;"	t	file:
recv_section_type	src/dm/impls/mesh/examples/tests/overlap2.cxx	/^typedef ALE::Test::OverlapTest::recv_section_type recv_section_type;$/;"	t	file:
recv_section_type	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^      typedef ALE::New::OverlapValues<recv_overlap_type, overlap_topology_type, point_type> recv_section_type;$/;"	t	class:ALE::Test::OverlapTest
recv_section_type	src/dm/impls/mesh/examples/tests/sieve2-old.cxx	/^typedef sectionCompletion::recv_section_type                      recv_section_type;$/;"	t	file:
recv_sizer_type	include/sieve/Completion.hh	/^      typedef typename ALE::Field<recv_overlap_type, int, ALE::Section<point_type, int, int_alloc_type> > recv_sizer_type;$/;"	t	class:ALE::New::Completion
recv_waits	include/petsc-private/matimpl.h	/^  MPI_Request   *recv_waits;            \/* array of receive requests *\/$/;"	m	struct:__anon1
recv_waits	include/petsc-private/vecimpl.h	/^  MPI_Request   *recv_waits;            \/* array of receive requests *\/$/;"	m	struct:__anon24
red	include/petsc-private/threadcommimpl.h	/^  PetscThreadCommReduction red;         \/* Reduction context *\/$/;"	m	struct:_p_PetscThreadComm
red_status	include/petsc-private/threadcommimpl.h	/^  PetscInt                      red_status;     \/* Reduction status *\/$/;"	m	struct:_p_PetscThreadCommRedCtx
redctx	include/petsc-private/threadcommimpl.h	/^  PetscThreadCommRedCtx redctx;                             \/* Reduction objects *\/$/;"	m	struct:_p_PetscThreadCommReduction
refCnt	include/sieve/ALE_mem.hh	/^    int*      refCnt; \/\/ reference count$/;"	m	class:ALE::Obj
refcnt	include/petscis.h	/^  PetscInt               refcnt;      \/* MPI Vecs obtained with VecDuplicate() and from MatGetVecs() reuse map of input object *\/$/;"	m	struct:_n_PetscLayout
refcnt	include/petscksp.h	/^typedef struct _p_KSPFischerGuess {PetscInt method,curl,maxl,refcnt;PetscBool  monitor;Mat mat; KSP ksp;}* KSPFischerGuess;$/;"	m	struct:_p_KSPFischerGuess
refcount	include/petsc-private/petscimpl.h	/^  PetscInt    refcount;         \/* number of references, communicator can be freed when this reaches 0 *\/$/;"	m	struct:__anon14
refct	include/petsc-private/dmpatchimpl.h	/^  PetscInt   refct;$/;"	m	struct:__anon10
refct	include/petsc-private/dmpleximpl.h	/^  PetscInt             refct;$/;"	m	struct:__anon30
refct	include/petsc-private/dmpleximpl.h	/^  PetscInt  refct;$/;"	m	struct:_n_DMLabel
refct	include/petsc-private/petscimpl.h	/^  PetscInt             refct;$/;"	m	struct:_p_PetscObject
refct	include/petsc-private/threadcommimpl.h	/^  PetscInt                refct;$/;"	m	struct:_p_PetscThreadComm
refct	include/petscis.h	/^  PetscInt        refct;$/;"	m	struct:_n_ISColoring
reference	include/sieve/ALE_containers.hh	/^      typedef value_type&                            reference;$/;"	t	class:ALE::IndexSequence::iterator
reference	include/sieve/ALE_mem.hh	/^    typedef typename Alloc::reference       reference;$/;"	t	class:ALE::polymorphic_allocator
reference	include/sieve/ALE_mem.hh	/^    typedef typename polymorphic_allocator<T>::reference       reference;$/;"	t	class:ALE::logged_allocator
reference	include/sieve/ALE_mem.hh	/^    typedef value_type&       reference;$/;"	t	class:ALE::malloc_allocator
reference	include/sieve/CartesianSieve.hh	/^        typedef value_type&             reference;$/;"	t	class:ALE::CartesianSieveDef::ConeSequence::iterator
reference	include/sieve/CartesianSieve.hh	/^        typedef value_type&             reference;$/;"	t	class:ALE::CartesianSieveDef::PointSequence::iterator
reference	include/sieve/CartesianSieve.hh	/^        typedef value_type&             reference;$/;"	t	class:ALE::CartesianSieveDef::SupportSequence::iterator
reference	include/sieve/ISieve.hh	/^        typedef value_type&             reference;$/;"	t	class:ALE::IFSieveDef::Sequence::const_iterator
reference	include/sieve/LabelSifter.hh	/^        typedef typename iterator_base::reference          reference;$/;"	t	class:ALE::NewSifterDef::IndexSequenceTraits::iterator
reference	include/sieve/LabelSifter.hh	/^        typedef typename iterator_base::reference          reference;$/;"	t	class:ALE::NewSifterDef::ReversibleIndexSequenceTraits::reverse_iterator
reference	include/sieve/LabelSifter.hh	/^        typedef value_type&                            reference;$/;"	t	class:ALE::NewSifterDef::IndexSequenceTraits::iterator_base
reference	include/sieve/Overlap.hh	/^    typedef value_type& reference;$/;"	t	class:PETSc::DualSequence::iterator
reference	include/sieve/Sifter.hh	/^        typedef typename iterator_base::reference          reference;$/;"	t	class:ALE::SifterDef::IndexSequenceTraits::iterator
reference	include/sieve/Sifter.hh	/^        typedef typename iterator_base::reference          reference;$/;"	t	class:ALE::SifterDef::ReversibleIndexSequenceTraits::reverse_iterator
reference	include/sieve/Sifter.hh	/^        typedef value_type&                            reference;$/;"	t	class:ALE::SifterDef::IndexSequenceTraits::iterator_base
refine	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*refine)(DM,MPI_Comm,DM*);$/;"	m	struct:_DMOps
refine	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^  PetscReal  refine;      \/\/ The refinement limit$/;"	m	struct:__anon5	file:
refine	src/dm/impls/mesh/examples/tests/sieveTests.cxx	/^  PetscReal  refine;        \/\/ The refinement limit$/;"	m	struct:__anon11	file:
refineMesh	include/sieve/Generator.hh	/^      static Obj<Mesh> refineMesh(const Obj<Mesh>& mesh, const Obj<typename Mesh::real_section_type>& maxVolumes, const bool interpolate = false) {$/;"	f	class:ALE::TetGen::Refiner
refineMesh	include/sieve/Generator.hh	/^      static Obj<Mesh> refineMesh(const Obj<Mesh>& mesh, const Obj<typename Mesh::real_section_type>& maxVolumes, const bool interpolate = false) {$/;"	f	class:ALE::Triangle::Refiner
refineMesh	include/sieve/Generator.hh	/^      static Obj<Mesh> refineMesh(const Obj<Mesh>& mesh, const double maxVolume, const bool interpolate = false) {$/;"	f	class:ALE::TetGen::Refiner
refineMesh	include/sieve/Generator.hh	/^      static Obj<Mesh> refineMesh(const Obj<Mesh>& mesh, const double maxVolume, const bool interpolate = false, const bool forceSerial = false) {$/;"	f	class:ALE::Triangle::Refiner
refineMesh	include/sieve/Generator.hh	/^      static Obj<Mesh> refineMesh(const Obj<Mesh>& serialMesh, const double maxVolumes[], const bool interpolate = false) {$/;"	f	class:ALE::TetGen::Refiner
refineMesh	include/sieve/Generator.hh	/^      static Obj<Mesh> refineMesh(const Obj<Mesh>& serialMesh, const double maxVolumes[], const bool interpolate = false, const bool forceSerial = false) {$/;"	f	class:ALE::Triangle::Refiner
refineMesh	include/sieve/Generator.hh	/^    static Obj<Mesh> refineMesh(const Obj<Mesh>& mesh, const Obj<typename Mesh::real_section_type>& maxVolumes, const bool interpolate = false) {$/;"	f	class:ALE::Generator
refineMesh	include/sieve/Generator.hh	/^    static Obj<Mesh> refineMesh(const Obj<Mesh>& mesh, const double maxVolume, const bool interpolate = false, const bool forceSerial = false) {$/;"	f	class:ALE::Generator
refineMeshLocal	include/sieve/Generator.hh	/^      static Obj<Mesh> refineMeshLocal(const Obj<Mesh>& mesh, const double maxVolume, const bool interpolate = false) {$/;"	f	class:ALE::Triangle::Refiner
refineMeshLocal	include/sieve/Generator.hh	/^      static Obj<Mesh> refineMeshLocal(const Obj<Mesh>& mesh, const double maxVolumes[], const bool interpolate = false) {$/;"	f	class:ALE::Triangle::Refiner
refineMeshLocal	include/sieve/Generator.hh	/^    static Obj<Mesh> refineMeshLocal(const Obj<Mesh>& mesh, const double maxVolume, const bool interpolate = false) {$/;"	f	class:ALE::Generator
refineMeshV	include/sieve/Generator.hh	/^      static Obj<Mesh> refineMeshV(const Obj<Mesh>& mesh, const Obj<typename Mesh::real_section_type>& maxVolumes, const bool interpolate = false, const bool forceSerial = false, const bool renumber = false) {$/;"	f	class:ALE::TetGen::Refiner
refineMeshV	include/sieve/Generator.hh	/^      static Obj<Mesh> refineMeshV(const Obj<Mesh>& mesh, const Obj<typename Mesh::real_section_type>& maxVolumes, const bool interpolate = false, const bool renumber = false) {$/;"	f	class:ALE::Triangle::Refiner
refineMeshV	include/sieve/Generator.hh	/^      static Obj<Mesh> refineMeshV(const Obj<Mesh>& mesh, const double maxVolume, const bool interpolate = false, const bool forceSerial = false, const bool renumber = false) {$/;"	f	class:ALE::TetGen::Refiner
refineMeshV	include/sieve/Generator.hh	/^      static Obj<Mesh> refineMeshV(const Obj<Mesh>& mesh, const double maxVolume, const bool interpolate = false, const bool forceSerial = false, const bool renumber = false) {$/;"	f	class:ALE::Triangle::Refiner
refineMeshV	include/sieve/Generator.hh	/^      static Obj<Mesh> refineMeshV(const Obj<Mesh>& mesh, const double maxVolumes[], const bool interpolate = false, const bool forceSerial = false, const bool renumber = false) {$/;"	f	class:ALE::TetGen::Refiner
refineMeshV	include/sieve/Generator.hh	/^      static Obj<Mesh> refineMeshV(const Obj<Mesh>& mesh, const double maxVolumes[], const bool interpolate = false, const bool forceSerial = false, const bool renumber = false) {$/;"	f	class:ALE::Triangle::Refiner
refineMeshV	include/sieve/Generator.hh	/^    static Obj<Mesh> refineMeshV(const Obj<Mesh>& mesh, const Obj<typename Mesh::real_section_type>& maxVolumes, const bool interpolate = false, const bool renumber = false) {$/;"	f	class:ALE::Generator
refineMeshV	include/sieve/Generator.hh	/^    static Obj<Mesh> refineMeshV(const Obj<Mesh>& mesh, const double maxVolume, const bool interpolate = false, const bool forceSerial = false, const bool renumber = false) {$/;"	f	class:ALE::Generator
refine_x	include/petsc-private/dmdaimpl.h	/^  PetscInt              refine_x,refine_y,refine_z;    \/* ratio used in refining *\/$/;"	m	struct:__anon23
refine_y	include/petsc-private/dmdaimpl.h	/^  PetscInt              refine_x,refine_y,refine_z;    \/* ratio used in refining *\/$/;"	m	struct:__anon23
refine_z	include/petsc-private/dmdaimpl.h	/^  PetscInt              refine_x,refine_y,refine_z;    \/* ratio used in refining *\/$/;"	m	struct:__anon23
refinehierarchy	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*refinehierarchy)(DM,PetscInt,DM*);$/;"	m	struct:_DMOps
refinehook	include/petsc-private/dmimpl.h	/^  DMRefineHookLink        refinehook;$/;"	m	struct:_p_DM
refinehook	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*refinehook)(DM,DM,void*);     \/* Run once, when a fine DM is created *\/$/;"	m	struct:_DMRefineHookLink
refinementGrading	src/dm/impls/mesh/examples/tutorials/ex_coarsen.c	/^  PetscBool refinementGrading;   \/\/grade the L-shaped and Fichera corner meshes as C0r^-2 \\leq h \\leq C1r^-2$/;"	m	struct:__anon7	file:
refinementGrading	src/dm/impls/mesh/examples/tutorials/ex_coarsen_3.c	/^  PetscBool refinementGrading;   \/\/grade the L-shaped and Fichera corner meshes as C0r^-2 \\leq h \\leq C1r^-2$/;"	m	struct:__anon1	file:
refinementLimit	include/petsc-private/dmpleximpl.h	/^  PetscReal            refinementLimit;   \/* Maximum volume for refined cell *\/$/;"	m	struct:__anon30
refinementLimit	src/dm/impls/mesh/examples/tests/ex1.c	/^  PetscReal     refinementLimit;   \/* The largest allowable cell volume *\/$/;"	m	struct:__anon16	file:
refinementLimit	src/dm/impls/mesh/examples/tests/ex2.c	/^  PetscReal     refinementLimit;   \/* The largest allowable cell volume *\/$/;"	m	struct:__anon17	file:
refinementLimit	src/dm/impls/mesh/examples/tests/ex3.c	/^  PetscReal     refinementLimit;   \/* The largest allowable cell volume *\/$/;"	m	struct:__anon15	file:
refinementLimit	src/dm/impls/mesh/examples/tests/mesh1.cxx	/^  PetscReal  refinementLimit; \/\/ The largest allowable cell volume$/;"	m	struct:__anon4	file:
refinementLimit	src/dm/impls/mesh/examples/tests/mesh2.cxx	/^  PetscReal  refinementLimit; \/\/ The largest allowable cell volume$/;"	m	struct:__anon1	file:
refinementLimit	src/dm/impls/mesh/examples/tests/operator1.cxx	/^  PetscReal  refinementLimit; \/\/ The largest allowable cell volume$/;"	m	struct:__anon19	file:
refinementLimit	src/dm/impls/mesh/examples/tutorials/ex_coarsen.c	/^  PetscReal refinementLimit;     \/\/ the maximum cell volume used in the finest mesh$/;"	m	struct:__anon7	file:
refinementLimit	src/dm/impls/mesh/examples/tutorials/ex_coarsen_3.c	/^  PetscReal refinementLimit;     \/\/ the maximum cell volume used in the finest mesh$/;"	m	struct:__anon1	file:
refinementLimit	src/dm/impls/plex/examples/tests/ex1.c	/^  PetscReal refinementLimit;       \/* The largest allowable cell volume *\/$/;"	m	struct:__anon4	file:
refinementLimit	src/dm/impls/plex/examples/tests/ex3.c	/^  PetscReal refinementLimit;       \/* The largest allowable cell volume *\/$/;"	m	struct:__anon3	file:
refinementUniform	include/petsc-private/dmpleximpl.h	/^  PetscBool            refinementUniform; \/* Flag for uniform cell refinement *\/$/;"	m	struct:__anon30
refinementUniform	src/dm/impls/plex/examples/tests/ex1.c	/^  PetscBool refinementUniform;     \/* Uniformly refine the mesh *\/$/;"	m	struct:__anon4	file:
refinementUniform	src/dm/impls/plex/examples/tests/ex4.c	/^  PetscBool refinementUniform; \/* Uniformly refine the mesh *\/$/;"	m	struct:__anon6	file:
regions	src/dm/impls/mesh/examples/tutorials/fast_coarsen.h	/^  int * regions; \/\/the number of comparison regions$/;"	m	struct:ALE::Coarsener::coarsen_Stats
regression	config/builder2.py	/^def regression(args):$/;"	f
regressionParameters	config/builder.py	/^regressionParameters = {'src\/dm\/impls\/patch\/examples\/tests\/ex1': [{'numProcs': 1, 'args': '-patch_size 2 -grid_size 6'},$/;"	v
regressionTests	config/builder.py	/^ def regressionTests(self, rootDir):$/;"	m	class:PETScMaker
regressionTestsDir	config/builder.py	/^ def regressionTestsDir(self, dirname, dummy):$/;"	m	class:PETScMaker
reject	include/petsc-private/tsimpl.h	/^  PetscInt reject,max_reject;$/;"	m	struct:_p_TS
relabel	include/sieve/ISieve.hh	/^    void relabel(_Section& labeling) {$/;"	f	class:ALE::IFSieve
relabel	include/sieve/LabelSifter.hh	/^    void relabel(Labeling& relabeling, AnotherSifter& newLabel) {$/;"	f	class:ALE::LabelSifter
relabel	include/sieve/Mesh.hh	/^    void relabel(Section_& labeling) {$/;"	f	class:ALE::IMesh
relabel	include/sieve/Overlap.hh	/^  void relabel(Labeling& relabeling, Overlap& newLabel) {$/;"	f	class:PETSc::Overlap
relabel	include/sieve/Sifter.hh	/^    void relabel(Labeling& relabeling, AnotherSifter& newLabel) {$/;"	f	class:ALE::Sifter
relabelSection	include/sieve/Ordering.hh	/^    static void relabelSection(Section& section, Labeling& relabeling, Section& newSection) {$/;"	f	class:ALE::Ordering
relpath	config/cmakegen.py	/^    def relpath(filename):$/;"	f	function:pkgsources.compareSourceLists
remote	include/petsc-private/sfimpl.h	/^  PetscSFNode     *remote;      \/* Remote references to roots for each local leaf *\/$/;"	m	struct:_p_PetscSF
remoteOffsets	include/petsc-private/characteristicimpl.h	/^  PetscInt    *remoteOffsets;   \/* Offset into remote queue for each process (Prefix sums of fill_count) *\/$/;"	m	struct:_p_Characteristic
remotePoints	include/sieve/Overlap.hh	/^    const second_type *remotePoints;$/;"	m	class:PETSc::DualSequence::iterator
remotePoints	include/sieve/Overlap.hh	/^  point_type *remotePoints;      \/\/ [pointsOffset[numRanks]]: Remote points array for each partner process$/;"	m	class:PETSc::Overlap
remoteRenumbering	include/sieve/ParallelMapping.hh	/^    remote_renumbering_type remoteRenumbering;$/;"	m	class:ALE::PointFactory
remote_alloc	include/petsc-private/sfimpl.h	/^  PetscSFNode     *remote_alloc;$/;"	m	struct:_p_PetscSF
remote_renumbering_type	include/sieve/ParallelMapping.hh	/^    typedef std::map<int,std::map<point_type,point_type> > remote_renumbering_type;$/;"	t	class:ALE::PointFactory
remove	config/BuildSystem/config/setsBackport.py	/^    def remove(self, element):$/;"	m	class:Set
remove	config/BuildSystem/config/setsOrdered.py	/^    def remove(self, element):$/;"	m	class:Set
remove	include/petsc-private/matimpl.h	/^  PetscErrorCode (*remove)(MatNullSpace,Vec,void*);  \/* for user provided removal function *\/$/;"	m	struct:_p_MatNullSpace
removeArrow	include/sieve/LabelSifter.hh	/^    virtual void removeArrow(const typename traits::arrow_type& a) {$/;"	f	class:ALE::LabelSifter
removeArrow	include/sieve/Sifter.hh	/^    virtual void removeArrow(const typename traits::arrow_type& a) {$/;"	f	class:ALE::ASifter
removeArrow	include/sieve/Sifter.hh	/^    virtual void removeArrow(const typename traits::source_type& p, const typename traits::target_type& q) {$/;"	f	class:ALE::ASifter
removeBasePoint	include/sieve/Sifter.hh	/^    void removeBasePoint(const typename traits::target_type t) {$/;"	f	class:ALE::ASifter
removeCapPoint	include/sieve/Sifter.hh	/^    void removeCapPoint(const typename traits::source_type s) {$/;"	f	class:ALE::ASifter
removeNode	config/builder.py	/^  def removeNode(self, filename):$/;"	m	class:SourceDatabase
removePoint	include/sieve/Sieve.hh	/^      void removePoint(const typename traits::rec_type::point_type& p) {$/;"	f	struct:ALE::SieveDef::RecContainer
removePoint	include/sieve/Sifter.hh	/^      void removePoint(const typename traits::rec_type::point_type& p) {$/;"	f	struct:ALE::SifterDef::RecContainer
removeRoot	config/BuildSystem/retrieval.py	/^  def removeRoot(self, root, canExist, force = 0):$/;"	f
removeSubgraph	config/BuildSystem/build/buildGraph.py	/^  def removeSubgraph(self, graph):$/;"	m	class:BuildGraph
removeSubgraph	config/BuildSystem/graph.py	/^  def removeSubgraph(self, graph):$/;"	m	class:DirectedGraph
removeVertex	config/BuildSystem/build/buildGraph.py	/^  def removeVertex(self, vertex):$/;"	m	class:BuildGraph
removeVertex	config/BuildSystem/graph.py	/^  def removeVertex(self, vertex):$/;"	m	class:DirectedGraph
removes	bin/processSummary.py	/^  removes = [$/;"	v	class:LogSummarizer
rename	include/sieve/ALE_args.hh	/^    ArgDB& rename(const string& name) {$/;"	f	class:ALE::ArgDB
rend	include/petscis.h	/^  PetscInt               rstart,rend; \/* local start, local end + 1 *\/$/;"	m	struct:_n_PetscLayout
rend	include/sieve/LabelSifter.hh	/^        virtual reverse_iterator rend() {$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
rend	include/sieve/Sifter.hh	/^        virtual reverse_iterator rend() {$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
renumber	include/sieve/ISieve.hh	/^      bool         renumber;$/;"	m	class:ALE::ISieveVisitor::FilteredPointRetriever
renumberLocalAdjacencyGraph	include/petscdmmesh.hh	/^PetscErrorCode renumberLocalAdjacencyGraph(const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar> >& mesh, const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar>::sieve_type>& adjGraph, const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar>::send_overlap_type>& sendOverlap, const ALE::Obj<Order>& globalOrder)$/;"	f
renumberLocalAdjacencyGraph	include/petscdmmesh.hh	/^PetscErrorCode renumberLocalAdjacencyGraph(const ALE::Obj<Mesh>& mesh, const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar>::sieve_type>& adjGraph, const ALE::Obj<ALE::Mesh<PetscInt,PetscScalar>::send_overlap_type>& sendOverlap, const ALE::Obj<Order>& globalOrder)$/;"	f
renumberPoints	include/sieve/ParallelMapping.hh	/^    void renumberPoints(const Iterator& begin, const Iterator& end) {$/;"	f	class:ALE::PointFactory
renumberPoints	include/sieve/ParallelMapping.hh	/^    void renumberPoints(const Iterator& begin, const Iterator& end, const KeyExtractor& ex) {$/;"	f	class:ALE::PointFactory
renumbering	include/sieve/ISieve.hh	/^      Renumbering& renumbering;$/;"	m	class:ALE::ISieveVisitor::FilteredPointRetriever
renumbering	include/sieve/ParallelMapping.hh	/^    renumbering_type renumbering;$/;"	m	class:ALE::PointFactory
renumbering_type	include/sieve/Mesh.hh	/^    typedef std::map<point_type, point_type>                          renumbering_type;$/;"	t	class:ALE::Bundle
renumbering_type	include/sieve/Mesh.hh	/^    typedef std::map<point_type, point_type>                          renumbering_type;$/;"	t	class:ALE::IBundle
renumbering_type	include/sieve/ParallelMapping.hh	/^    typedef std::map<point_type,point_type> renumbering_type;$/;"	t	class:ALE::PointFactory
reorderedComparator	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^struct reorderedComparator {$/;"	s	file:
replaceDefaultDescriptors	config/BuildSystem/config/autoconf.py	/^  def replaceDefaultDescriptors(self, codeStr):$/;"	m	class:Configure
replaceStorage	include/sieve/Field.hh	/^    void replaceStorage(value_type *newArray) {$/;"	f	class:ALE::Section
replaceStorage	include/sieve/Field.hh	/^    void replaceStorage(value_type *newArray, const bool sharedStorage = false, const int sharedStorageSize = 0) {$/;"	f	class:ALE::GeneralSection
replaceVertex	config/BuildSystem/graph.py	/^  def replaceVertex(self, vertex, newVertex):$/;"	m	class:DirectedGraph
replacearray	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*replacearray)(Vec,const PetscScalar*);     \/* replace data array *\/$/;"	m	struct:_VecOps
reply	bin/TOPSInstaller.py	/^			reply = boolbox()$/;"	v
reply	bin/TOPSInstaller.py	/^			reply = buttonbox()$/;"	v
reply	bin/TOPSInstaller.py	/^			reply = buttonbox(message, "Demo of Buttonbox with many, many buttons!", choices)$/;"	v
reply	bin/TOPSInstaller.py	/^			reply = ccbox(message)$/;"	v
reply	bin/TOPSInstaller.py	/^			reply = choicebox("The list of choices is empty!", None, [])$/;"	v
reply	bin/TOPSInstaller.py	/^			reply = choicebox(message, None, listChoices)$/;"	v
reply	bin/TOPSInstaller.py	/^			reply = codebox(message, "Code Sample", code_snippet)$/;"	v
reply	bin/TOPSInstaller.py	/^			reply = enterbox("Enter the name of your best friend:", "Love!", "Suzy Smith")$/;"	v
reply	bin/TOPSInstaller.py	/^			reply = enterbox("Enter the name of your worst enemy:", "Hate!")$/;"	v
reply	bin/TOPSInstaller.py	/^			reply = indexbox(msg, title, choices)$/;"	v
reply	bin/TOPSInstaller.py	/^			reply = integerbox($/;"	v
reply	bin/TOPSInstaller.py	/^			reply = msgbox("short message", "This is a long title")$/;"	v
reply	bin/TOPSInstaller.py	/^			reply = multchoicebox(message,"DEMO OF multchoicebox", listChoices)$/;"	v
reply	bin/TOPSInstaller.py	/^			reply = textbox(message, "Text Sample", text_snippet)$/;"	v
reply	bin/TOPSInstaller.py	/^			reply = ynbox(message, title)$/;"	v
reply	bin/TOPSInstaller.py	/^		reply = choice.split()$/;"	v
reply	bin/TOPSInstaller.py	/^                 reply = fileopenbox("Location of C++ compiler","Location of C++ compiler")$/;"	v
reply	bin/TOPSInstaller.py	/^                 reply = fileopenbox("Location of Fortran compiler","Location of Fortran compiler")$/;"	v
reply	bin/TOPSInstaller.py	/^             reply = fileopenbox("Location of C compiler","Location of C compiler")$/;"	v
reply	bin/TOPSInstaller.py	/^           reply = diropenbox("Directory of BLAS and LAPACK libraries","Directory of BLAS and LAPACK libraries")$/;"	v
reply	bin/TOPSInstaller.py	/^           reply = diropenbox("Directory of Babel","Directory of Babel")$/;"	v
reply	bin/TOPSInstaller.py	/^           reply = diropenbox("Directory of CCafe","Directory of CCAFE")$/;"	v
reply	bin/TOPSInstaller.py	/^           reply = diropenbox("Directory of MPI installation","Directory of MPI installation")$/;"	v
reply	bin/TOPSInstaller.py	/^        reply = buttonbox('Install TOPS Solver Components?',title,['Yes','No'],message2="You must have CCAFE and BABEL\\n already installed to use them.")$/;"	v
reply	bin/TOPSInstaller.py	/^        reply = diropenbox("Location to compile and install packages","Location to compile and install packages")$/;"	v
reply	bin/TOPSInstaller.py	/^        reply = indexbox('Compiler to use for PETSc?',title,['C','C++'])$/;"	v
reply	bin/TOPSInstaller.py	/^        reply = indexbox('Compilers to use?',title,['Any','GNU','non-GNU',"I'll indicate the compilers"])$/;"	v
reply	bin/TOPSInstaller.py	/^        reply = indexbox('Which version of BLAS and LAPACK do you wish to use?',title,['Have installer locate it', 'Install it',"I'll indicate its location"])$/;"	v
reply	bin/TOPSInstaller.py	/^        reply = indexbox('Which version of MPI do you wish to use?',title,['Have installer locate it', 'Install MPICH-2','Install OpenMPI','None',"I'll indicate its location"])$/;"	v
reply	bin/TOPSInstaller.py	/^        reply = multchoicebox("Pick the optional TOPS packages to install. PETSc will \\nalways be installed. \\n\\nNote: many of these packages are not portable\\nfor all machines, hence select only the packages you truly need.",title, packages)$/;"	v
reply	bin/TOPSInstaller.py	/^        reply = multchoicebox("Pick the other packages to install.\\n\\nAgain, only select the packages you truly need.",title, packages)$/;"	v
reply	bin/TOPSInstaller.py	/^        reply = ynbox('Compile debug versions of libraries? Recommended for all development.',title)$/;"	v
reply	bin/TOPSInstaller.py	/^        reply = ynbox('Compile libraries so they may be used from Fortran?',title)$/;"	v
reply	bin/TOPSInstaller.py	/^        reply = ynbox('Compile libraries so they may be used from Python?',title)$/;"	v
reply	bin/TOPSInstaller.py	/^        reply = ynbox('Do MPI jobs need to be submitted with a batch system?',title)$/;"	v
report	config/BuildSystem/config/base.py	/^    def report(command, status, output, error):$/;"	f	function:Configure.outputCompile
report	config/BuildSystem/config/base.py	/^    def report(command, status, output, error):$/;"	f	function:Configure.outputLink
report	config/BuildSystem/config/base.py	/^    def report(command, status, output, error):$/;"	f	function:Configure.preprocess
reproduce	include/petsc-private/matimpl.h	/^  PetscBool     reproduce;$/;"	m	struct:__anon1
reproduce	include/petsc-private/vecimpl.h	/^  PetscBool      reproduce;            \/* always receive the ghost points in the same order of processes *\/$/;"	m	struct:_p_VecScatter
reproduce_count	include/petsc-private/matimpl.h	/^  PetscInt      reproduce_count;$/;"	m	struct:__anon1
request	include/petsc-private/characteristicimpl.h	/^  MPI_Request *request;         \/* Requests for sizes\/velocities\/fields from other processes *\/$/;"	m	struct:_p_Characteristic
requestFilter	src/dm/impls/mesh/examples/tests/ex08.cxx	/^ArrowContainer::filter_object_type requestFilter(ArrowContainer& ac, ArrowContainer::predicate_type width, const char *label) {$/;"	f
request_type	include/sieve/Field.hh	/^    typedef enum {SEND, RECEIVE}                     request_type;$/;"	t	class:ALE::Field	typeref:enum:ALE::Field::__anon5
requests	include/petsc-private/vecimpl.h	/^  MPI_Request            *requests,*rev_requests;$/;"	m	struct:__anon29
requests_type	include/sieve/BasicCommunication.hh	/^    typedef std::vector<MPI_Request>               requests_type;$/;"	t	class:ALE::MPIMover
requests_type	include/sieve/Field.hh	/^    typedef std::map<patch_type, MPI_Request>        requests_type;$/;"	t	class:ALE::Field
require	config/BuildSystem/config/framework.py	/^  def require(self, moduleName, depChild, keywordArgs = {}):$/;"	m	class:Framework
requireMpiLdPath	config/BuildSystem/config/setCompilers.py	/^  def requireMpiLdPath(self):$/;"	m	class:Configure
res_hist	include/petsc-private/kspimpl.h	/^  PetscReal     *res_hist;            \/* If !0 stores residual at iterations*\/$/;"	m	struct:_p_KSP
res_hist_alloc	include/petsc-private/kspimpl.h	/^  PetscReal     *res_hist_alloc;      \/* If !0 means user did not provide buffer, needs deallocation *\/$/;"	m	struct:_p_KSP
res_hist_len	include/petsc-private/kspimpl.h	/^  PetscInt      res_hist_len;         \/* current size of residual history array *\/$/;"	m	struct:_p_KSP
res_hist_max	include/petsc-private/kspimpl.h	/^  PetscInt      res_hist_max;         \/* actual amount of data in residual_history *\/$/;"	m	struct:_p_KSP
res_hist_reset	include/petsc-private/kspimpl.h	/^  PetscBool     res_hist_reset;       \/* reset history to size zero for each new solve *\/$/;"	m	struct:_p_KSP
reset	config/BuildSystem/build/transform.py	/^  def reset(self):$/;"	m	class:Transform
reset	include/petsc-private/kspimpl.h	/^  PetscErrorCode (*reset)(KSP);$/;"	m	struct:_KSPOps
reset	include/petsc-private/linesearchimpl.h	/^  PetscErrorCode (*reset)(SNESLineSearch);$/;"	m	struct:_LineSearchOps
reset	include/petsc-private/pcimpl.h	/^  PetscErrorCode (*reset)(PC);$/;"	m	struct:_PCOps
reset	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*reset)(SNES);$/;"	m	struct:_SNESOps
reset	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*reset)(TS);$/;"	m	struct:_TSOps
reset	include/sieve/ISieve.hh	/^      void reset(const point_type data[], const int begin, const int end) {_data = data; _begin = begin; _end = end;};$/;"	f	class:ALE::IFSieveDef::Sequence
resetEnvCompilers	config/BuildSystem/config/setCompilers.py	/^  def resetEnvCompilers(self):$/;"	m	class:Configure
resetarray	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*resetarray)(Vec);      \/* vector points to its original array, i.e. undoes any VecPlaceArray() *\/$/;"	m	struct:_VecOps
resizeChart	include/sieve/IField.hh	/^    bool resizeChart(const chart_type& chart) {$/;"	f	class:ALE::IGeneralSection
resizeChart	include/sieve/IField.hh	/^    bool resizeChart(const chart_type& chart) {$/;"	f	class:ALE::ISection
resizeChart	include/sieve/IField.hh	/^    bool resizeChart(const chart_type& chart) {$/;"	f	class:ALE::IUniformSection
resizewindow	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*resizewindow)(PetscDraw,int,int);$/;"	m	struct:_PetscDrawOps
resolveDependency	config/BuildSystem/sourceDatabase.py	/^  def resolveDependency(self, source, dep):$/;"	m	class:DependencyAnalyzer
restoreClassName	include/sieve/ALE_mem.hh	/^    static void restoreClassName(const char * \/* className *\/) {};$/;"	f	class:ALE::MemoryLogger
restoreClassName	include/sieve/ALE_mem.hh	/^  static void restoreClassName(const T * \/* obj *\/, const char *id_name) {restoreClassName<T>(id_name);};$/;"	f	namespace:ALE
restoreClassName	include/sieve/ALE_mem.hh	/^  static void restoreClassName(const char *) {};$/;"	f	namespace:ALE
restoreClassName	include/sieve/ALE_mem.hh	/^  static void restoreClassName(const char *id_name) {$/;"	f	namespace:ALE
restorearray	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*restorearray)(Vec,PetscScalar**);        \/* restore data array *\/$/;"	m	struct:_VecOps
restorearrayread	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*restorearrayread)(Vec,const PetscScalar**);$/;"	m	struct:_VecOps
restorecolumnij	include/petsc-private/matimpl.h	/^  PetscErrorCode (*restorecolumnij)(Mat,PetscInt,PetscBool ,PetscBool ,PetscInt*,const PetscInt *[],const PetscInt *[],PetscBool  *);$/;"	m	struct:_MatOps
restoreindices	include/petsc-private/isimpl.h	/^  PetscErrorCode (*restoreindices)(IS,const PetscInt*[]);$/;"	m	struct:_ISOps
restorelocalsubmatrix	include/petsc-private/matimpl.h	/^  PetscErrorCode (*restorelocalsubmatrix)(Mat,IS,IS,Mat*);$/;"	m	struct:_MatOps
restorerow	include/petsc-private/matimpl.h	/^  PetscErrorCode (*restorerow)(Mat,PetscInt,PetscInt *,PetscInt *[],PetscScalar *[]);$/;"	m	struct:_MatOps
restorerowij	include/petsc-private/matimpl.h	/^  PetscErrorCode (*restorerowij)(Mat,PetscInt,PetscBool ,PetscBool ,PetscInt *,const PetscInt *[],const PetscInt *[],PetscBool  *);$/;"	m	struct:_MatOps
restorerowuppertriangular	include/petsc-private/matimpl.h	/^  PetscErrorCode (*restorerowuppertriangular)(Mat);$/;"	m	struct:_MatOps
restoresingleton	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*restoresingleton)(PetscDraw,PetscDraw*);$/;"	m	struct:_PetscDrawOps
restoresingleton	include/petsc-private/viewerimpl.h	/^   PetscErrorCode (*restoresingleton)(PetscViewer,PetscViewer*);$/;"	m	struct:_PetscViewerOps
restoresubcomm	include/petsc-private/viewerimpl.h	/^   PetscErrorCode (*restoresubcomm)(PetscViewer,MPI_Comm,PetscViewer*);$/;"	m	struct:_PetscViewerOps
restoresubvector	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*restoresubvector)(Vec,IS,Vec*);$/;"	m	struct:_VecOps
restrict	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^      const value_type *restrict(const patch_type& patch, const point_type& point) {$/;"	f	class:ALE::Test::SupportSizer
restrictBase	include/sieve/Sifter.hh	/^    restrictBase(const Obj<InputSequence>& points) {$/;"	f	class:ALE::ASifter
restrictCap	include/sieve/Sifter.hh	/^    restrictCap(const Obj<InputSequence>& points) {$/;"	f	class:ALE::ASifter
restrictClosure	include/petsc-private/meshimpl.h	/^  PetscErrorCode (*restrictClosure)(SectionInt,int,PetscInt**);$/;"	m	struct:_SectionIntOps
restrictClosure	include/petsc-private/meshimpl.h	/^  PetscErrorCode (*restrictClosure)(SectionReal,int,PetscScalar**);$/;"	m	struct:_SectionRealOps
restrictClosure	include/sieve/CartesianSieve.hh	/^    const typename Section_::value_type *restrictClosure(const Obj<Section_>& section, const point_type& p) {$/;"	f	class:ALE::CartesianMesh
restrictClosure	include/sieve/Mesh.hh	/^    const typename Section::value_type *restrictClosure(const Obj<Section>& section, const point_type& p) {$/;"	f	class:ALE::IMesh
restrictClosure	include/sieve/Mesh.hh	/^    const typename Section::value_type *restrictClosure(const Obj<Section>& section, const point_type& p, typename Section::value_type *values, const int valuesSize) {$/;"	f	class:ALE::IMesh
restrictClosure	include/sieve/Mesh.hh	/^    const typename Section_::value_type *restrictClosure(const Obj<Section_>& section, const int tag, const int p) {$/;"	f	class:ALE::Bundle
restrictClosure	include/sieve/Mesh.hh	/^    const typename Section_::value_type *restrictClosure(const Obj<Section_>& section, const int tag, const int p, typename Section_::value_type  *values, const int offsets[], const int indices[]) {$/;"	f	class:ALE::Bundle
restrictClosure	include/sieve/Mesh.hh	/^    const typename Section_::value_type *restrictClosure(const Obj<Section_>& section, const int tag, const int p, typename Section_::value_type  *values, const int valuesSize) {$/;"	f	class:ALE::Bundle
restrictClosure	include/sieve/Mesh.hh	/^    const typename Section_::value_type *restrictClosure(const Obj<Section_>& section, const point_type& p) {$/;"	f	class:ALE::Bundle
restrictClosure	include/sieve/Mesh.hh	/^    const typename Section_::value_type *restrictClosure(const Obj<Section_>& section, const point_type& p, typename Section_::value_type  *values, const int valuesSize) {$/;"	f	class:ALE::Bundle
restrictClosure	include/sieve/Mesh.hh	/^    void restrictClosure(const point_type& p, Visitor& v) {$/;"	f	class:ALE::IMesh
restrictNew	include/sieve/Mesh.hh	/^    const typename Section_::value_type *restrictNew(const Obj<Section_>& section, const point_type& p) {$/;"	f	class:ALE::Bundle
restrictNew	include/sieve/Mesh.hh	/^    const typename Section_::value_type *restrictNew(const Obj<Section_>& section, const point_type& p, typename Section_::value_type  *values, const int valuesSize) {$/;"	f	class:ALE::Bundle
restrictPoint	include/sieve/Field.hh	/^    const value_type *restrictPoint(const point_type& p) const {$/;"	f	class:ALE::ConstantSection
restrictPoint	include/sieve/Field.hh	/^    const value_type *restrictPoint(const point_type& p) const {$/;"	f	class:ALE::FEMSection
restrictPoint	include/sieve/Field.hh	/^    const value_type *restrictPoint(const point_type& p) const {$/;"	f	class:ALE::FauxConstantSection
restrictPoint	include/sieve/Field.hh	/^    const value_type *restrictPoint(const point_type& p) const {$/;"	f	class:ALE::GeneralSection
restrictPoint	include/sieve/Field.hh	/^    const value_type *restrictPoint(const point_type& p) {$/;"	f	class:ALE::NewUniformSection
restrictPoint	include/sieve/Field.hh	/^    const value_type *restrictPoint(const point_type& p) {$/;"	f	class:ALE::Section
restrictPoint	include/sieve/Field.hh	/^    const value_type *restrictPoint(const point_type& p) {$/;"	f	class:ALE::UniformSection
restrictPoint	include/sieve/Field.hh	/^    void restrictPoint(const point_type& p, value_type values[], const int size) const {$/;"	f	class:ALE::GeneralSection
restrictPoint	include/sieve/IField.hh	/^    const value_type *restrictPoint(const point_type& p) const {$/;"	f	class:ALE::IConstantSection
restrictPoint	include/sieve/IField.hh	/^    const value_type *restrictPoint(const point_type& p) const {$/;"	f	class:ALE::ISection
restrictPoint	include/sieve/IField.hh	/^    const value_type *restrictPoint(const point_type& p) const {$/;"	f	class:ALE::IUniformSection
restrictPoint	include/sieve/Sections.hh	/^      const value_type *restrictPoint(const point_type& p) {$/;"	f	class:ALE::New::ArrowSection
restrictPoint	include/sieve/Sections.hh	/^      const value_type *restrictPoint(const point_type& p) {$/;"	f	class:ALE::New::ConeSection
restrictPoint	include/sieve/Sections.hh	/^      const value_type *restrictPoint(const point_type& p) {$/;"	f	class:ALE::New::ConeSizeSection
restrictPoint	include/sieve/Sections.hh	/^      const value_type *restrictPoint(const point_type& p) {$/;"	f	class:ALE::New::PartitionSection
restrictPoint	include/sieve/Sections.hh	/^      const value_type *restrictPoint(const point_type& p) {$/;"	f	class:ALE::New::PartitionSizeSection
restrictPoint	include/sieve/Sections.hh	/^      const value_type *restrictPoint(const point_type& p) {$/;"	f	class:ALE::New::SizeSection
restrictPoint	include/sieve/Sections.hh	/^      const value_type *restrictPoint(const point_type& p) {$/;"	f	class:ALE::New::SupportSection
restrictPoint	include/sieve/Sections.hh	/^      const value_type *restrictPoint(const point_type& p) {$/;"	f	class:ALE::New::SupportSizeSection
restrictPoint	include/sieve/Sections.hh	/^    const value_type *restrictPoint(const point_type& p) const {$/;"	f	class:ALE::BaseSection
restrictPoint	include/sieve/Sections.hh	/^    const value_type *restrictPoint(const point_type& p) const {$/;"	f	class:ALE::BaseSectionV
restrictPoint	include/sieve/Sections.hh	/^    const value_type *restrictPoint(const point_type& p) const {$/;"	f	class:ALE::LabelBaseSection
restrictPoint	include/sieve/Sections.hh	/^    const value_type *restrictPoint(const point_type& p) const {$/;"	f	class:ALE::LabelBaseSectionV
restrictPoint	include/sieve/Sections.hh	/^    const value_type *restrictPoint(const point_type& p) {$/;"	f	class:ALE::ConeSection
restrictPoint	include/sieve/Sections.hh	/^    const value_type *restrictPoint(const point_type& p) {$/;"	f	class:ALE::ConeSectionV
restrictPoint	include/sieve/Sections.hh	/^    const value_type *restrictPoint(const point_type& p) {$/;"	f	class:ALE::ConeSizeSection
restrictPoint	include/sieve/Sections.hh	/^    const value_type *restrictPoint(const point_type& p) {$/;"	f	class:ALE::ConeSizeSectionV
restrictPoint	include/sieve/Sections.hh	/^    const value_type *restrictPoint(const point_type& p) {$/;"	f	class:ALE::LabelSection
restrictPoint	include/sieve/Sections.hh	/^    const value_type *restrictPoint(const point_type& p) {$/;"	f	class:ALE::OrientedConeSectionV
restrictSpace	include/sieve/Field.hh	/^    const value_type *restrictSpace() const {$/;"	f	class:ALE::ConstantSection
restrictSpace	include/sieve/Field.hh	/^    const value_type *restrictSpace() const {$/;"	f	class:ALE::FEMSection
restrictSpace	include/sieve/Field.hh	/^    const value_type *restrictSpace() const {$/;"	f	class:ALE::GeneralSection
restrictSpace	include/sieve/Field.hh	/^    const value_type *restrictSpace() {$/;"	f	class:ALE::NewUniformSection
restrictSpace	include/sieve/Field.hh	/^    const value_type *restrictSpace() {$/;"	f	class:ALE::Section
restrictSpace	include/sieve/Field.hh	/^    const value_type *restrictSpace() {$/;"	f	class:ALE::UniformSection
restrictSpace	include/sieve/IField.hh	/^    const value_type *restrictSpace() const {$/;"	f	class:ALE::IConstantSection
restrictSpace	include/sieve/IField.hh	/^    const values_type& restrictSpace() const {$/;"	f	class:ALE::IUniformSection
restrictSpace	include/sieve/Sections.hh	/^    const value_type *restrictSpace() const {$/;"	f	class:ALE::BaseSection
restrictSpace	include/sieve/Sections.hh	/^    const value_type *restrictSpace() const {$/;"	f	class:ALE::BaseSectionV
restrictSpace	include/sieve/Sections.hh	/^    const value_type *restrictSpace() const {$/;"	f	class:ALE::LabelBaseSection
restrictSpace	include/sieve/Sections.hh	/^    const value_type *restrictSpace() const {$/;"	f	class:ALE::LabelBaseSectionV
restricthook	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*restricthook)(DM,Mat,Vec,Mat,DM,void*); \/* Run each time a new problem is restricted to a coarse grid *\/$/;"	m	struct:_DMCoarsenHookLink
restricthook	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*restricthook)(DM,VecScatter,VecScatter,DM,void*);$/;"	m	struct:_DMSubDomainHookLink
result	bin/TOPSGenerator.py	/^	result = buttonbox(message=message1, title=title, choices = ["Cancel", "Continue"],fontSize = 20,message2=message2)$/;"	v
result	bin/TOPSGenerator.py	/^          result = buttonbox(message="SIDL code generation failed", title=title, choices = ["Ok"],fontSize = 20,message2=out)$/;"	v
result	bin/TOPSGenerator.py	/^        result = buttonbox(message="Code generated",title=title,choices = ["Ok"],fontSize = 20,message2="Now edit "+app+"\/server\/c++\/"+app+"_System_Impl.cc")$/;"	v
result	bin/TOPSGenerator.py	/^        result = buttonbox(message="Ready to generate code", title=title, choices = ["Continue"],fontSize = 20,message2="This may take several minutes.")$/;"	v
result	bin/TOPSInstaller.py	/^	result = buttonbox(message='This preview version of the installer uses\\nthe nightly snapshot of the development\\nversion of PETSc.\\n\\nShould you encounter problems please send email\\nto petsc-maint@mcs.anl.gov with all output\\n', title="TOPS Software Installer", choices = ["Cancel", "Continue"])$/;"	v
result	bin/TOPSInstaller.py	/^	result = buttonbox(message=message1, title="TOPS Software Installer", choices = ["Cancel", "Continue"],fontSize = 20,message2=message2)$/;"	v
retain_stages	include/petsc-private/tsimpl.h	/^  PetscBool retain_stages;$/;"	m	struct:_p_TS
retrieval	config/BuildSystem/build/framework.py	/^    import install.retrieval$/;"	i
retrieval	config/BuildSystem/config/package.py	/^    import retrieval$/;"	i
retrieve	config/BuildSystem/retrieval.py	/^  def retrieve(self, url, root = None, canExist = 0, force = 0):$/;"	f
rev_requests	include/petsc-private/vecimpl.h	/^  MPI_Request            *requests,*rev_requests;$/;"	m	struct:__anon29
reverse_iterator	include/sieve/LabelSifter.hh	/^          reverse_iterator(const typename traits::reverse_iterator::itor_type& itor) : traits::reverse_iterator(itor) {};$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence::reverse_iterator
reverse_iterator	include/sieve/LabelSifter.hh	/^        class reverse_iterator : public traits::reverse_iterator {$/;"	c	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
reverse_iterator	include/sieve/LabelSifter.hh	/^        reverse_iterator(const itor_type& itor) : iterator_base(itor) {};$/;"	f	class:ALE::NewSifterDef::ReversibleIndexSequenceTraits::reverse_iterator
reverse_iterator	include/sieve/LabelSifter.hh	/^        typedef typename base_type::reverse_iterator reverse_iterator;$/;"	t	struct:ALE::LabelSifter::__anon7::coneSequence
reverse_iterator	include/sieve/LabelSifter.hh	/^        typedef typename base_type::reverse_iterator reverse_iterator;$/;"	t	struct:ALE::LabelSifter::__anon7::supportSequence
reverse_iterator	include/sieve/LabelSifter.hh	/^      class reverse_iterator : public iterator_base {$/;"	c	struct:ALE::NewSifterDef::ReversibleIndexSequenceTraits
reverse_iterator	include/sieve/Sifter.hh	/^          reverse_iterator(const typename traits::reverse_iterator::itor_type& itor) : traits::reverse_iterator(itor) {};$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence::reverse_iterator
reverse_iterator	include/sieve/Sifter.hh	/^        class reverse_iterator : public traits::reverse_iterator {$/;"	c	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
reverse_iterator	include/sieve/Sifter.hh	/^        reverse_iterator(const itor_type& itor) : iterator_base(itor) {};$/;"	f	class:ALE::SifterDef::ReversibleIndexSequenceTraits::reverse_iterator
reverse_iterator	include/sieve/Sifter.hh	/^        typedef typename base_type::reverse_iterator reverse_iterator;$/;"	t	struct:ALE::ASifter::__anon2::coneSequence
reverse_iterator	include/sieve/Sifter.hh	/^        typedef typename base_type::reverse_iterator reverse_iterator;$/;"	t	struct:ALE::ASifter::__anon2::supportSequence
reverse_iterator	include/sieve/Sifter.hh	/^      class reverse_iterator : public iterator_base {$/;"	c	struct:ALE::SifterDef::ReversibleIndexSequenceTraits
reversed	config/PETSc/Configure.py	/^      def reversed(lst): return lst[::-1]$/;"	f	function:Configure.dumpCMakeConfig.nub
revert	config/BuildSystem/build/bk.py	/^  def revert(self, set):$/;"	m	class:Close
revert	config/BuildSystem/sourceControl.py	/^  def revert(self, files):$/;"	m	class:BitKeeper
revert	config/BuildSystem/sourceControl.py	/^  def revert(self, files):$/;"	m	class:VersionControl
rhsctx	include/petsc-private/kspimpl.h	/^  void *rhsctx;$/;"	m	struct:_p_DMKSP
rhsfunction	include/petsc-private/tsimpl.h	/^  TSRHSFunction rhsfunction;$/;"	m	struct:_DMTSOps
rhsfunctionctx	include/petsc-private/tsimpl.h	/^  void *rhsfunctionctx;$/;"	m	struct:_p_DMTS
rhsjacobian	include/petsc-private/tsimpl.h	/^  TSRHSJacobian rhsjacobian;$/;"	m	struct:_DMTSOps
rhsjacobian	include/petsc-private/tsimpl.h	/^  } rhsjacobian;$/;"	m	struct:_p_TS	typeref:struct:_p_TS::__anon6
rhsjacobianctx	include/petsc-private/tsimpl.h	/^  void *rhsjacobianctx;$/;"	m	struct:_p_DMTS
rindex	include/petsc-private/matimpl.h	/^  PetscInt   *rindex;                       \/* compressed row index               *\/$/;"	m	struct:__anon3
rindices	include/petsc-private/matimpl.h	/^  PetscInt      **rindices;             \/* receiving data (indices) *\/$/;"	m	struct:__anon1
rindices	include/petsc-private/vecimpl.h	/^  PetscInt      *sindices,*rindices;$/;"	m	struct:__anon24
rmap	include/petsc-private/matimpl.h	/^  PetscLayout            rmap,cmap;$/;"	m	struct:_p_Mat
rmax	include/petsc-private/vecimpl.h	/^  PetscInt      rmax;                   \/* maximum message length *\/$/;"	m	struct:__anon24
rmctx	include/petsc-private/matimpl.h	/^  void*          rmctx;                 \/* context for remove() function *\/$/;"	m	struct:_p_MatNullSpace
rmine	include/petsc-private/sfimpl.h	/^  PetscInt        *rmine;       \/* Concatenated array holding local indices referencing each remote rank *\/$/;"	m	struct:_p_PetscSF
rnorm	include/petsc-private/kspimpl.h	/^  PetscReal       rnorm;                    \/* current residual norm *\/$/;"	m	struct:_p_KSP
rnorm0	include/petsc-private/kspimpl.h	/^  PetscReal       rnorm0;                   \/* initial residual norm (used for divergence testing) *\/$/;"	m	struct:_p_KSP
roffset	include/petsc-private/sfimpl.h	/^  PetscInt        *roffset;     \/* Array of length nranks+1, offset in rmine\/rremote for each rank *\/$/;"	m	struct:_p_PetscSF
root	config/BuildSystem/logger.py	/^  root = property(getRoot, setRoot, doc = 'The directory containing this module')$/;"	v	class:Logger
rootWindowPosition	bin/TOPSInstaller.py	/^rootWindowPosition = "+40+100"$/;"	v
roots	include/sieve/CartesianSieve.hh	/^    Obj<capSequence> roots() {$/;"	f	class:ALE::CartesianSieve
roots	include/sieve/Field.hh	/^    const Obj<capSequence>& roots() {return this->_points;}$/;"	f	class:ALE::DiscreteSieve
roots	include/sieve/ISieve.hh	/^    void roots(Visitor& v) const {$/;"	f	class:ALE::IFSieve
roots	include/sieve/ISieve.hh	/^    void roots(const Visitor& v) const {$/;"	f	class:ALE::IFSieve
roots	include/sieve/Sieve.hh	/^      Obj<typename traits::depthSequence> roots() {$/;"	f	class:ALE::Sieve
rows	include/petsc-private/matimpl.h	/^  PetscInt       **rows;           \/* lists the local rows for each color (using the local row numbering) *\/$/;"	m	struct:_p_MatFDColoring
rows	include/petsc-private/matimpl.h	/^  PetscInt       *rows;                  \/* lists the local rows for each color (using the local row numbering) *\/$/;"	m	struct:_p_MatTransposeColoring
rremote	include/petsc-private/sfimpl.h	/^  PetscInt        *rremote;     \/* Concatenated array holding remote indices referenced for each remote rank *\/$/;"	m	struct:_p_PetscSF
rs	include/petsc-private/matimpl.h	/^  PetscReal      rs;  \/* active row sum of abs(offdiagonals) *\/$/;"	m	struct:__anon4
rstart	include/petsc-private/matimpl.h	/^  PetscInt       rstart;           \/* first row owned by local processor *\/$/;"	m	struct:_p_MatFDColoring
rstart	include/petsc-private/matimpl.h	/^  PetscInt       rstart;           \/* first row owned by local processor *\/$/;"	m	struct:_p_MatTransposeColoring
rstart	include/petscis.h	/^  PetscInt               rstart,rend; \/* local start, local end + 1 *\/$/;"	m	struct:_n_PetscLayout
rstatus	include/petsc-private/vecimpl.h	/^  MPI_Status             *sstatus,*rstatus;$/;"	m	struct:__anon29
rtol	include/petsc-private/kspimpl.h	/^  PetscReal       rtol,                     \/* relative tolerance *\/$/;"	m	struct:_p_KSP
rtol	include/petsc-private/linesearchimpl.h	/^  PetscReal           rtol;$/;"	m	struct:_p_LineSearch
rtol	include/petsc-private/snesimpl.h	/^  PetscReal   rtol;               \/* relative tolerance *\/$/;"	m	struct:_p_SNES
rtol	include/petsc-private/tsimpl.h	/^  PetscReal atol,rtol;          \/* Relative and absolute tolerance for local truncation error *\/$/;"	m	struct:_p_TS
rtol_0	include/petsc-private/snesimpl.h	/^  PetscReal rtol_0;              \/* initial rtol *\/$/;"	m	struct:__anon5
rtol_last	include/petsc-private/snesimpl.h	/^  PetscReal rtol_last;           \/* last rtol *\/$/;"	m	struct:__anon5
rtol_max	include/petsc-private/snesimpl.h	/^  PetscReal rtol_max;            \/* maximum rtol *\/$/;"	m	struct:__anon5
run	bin/configVars.py	/^  def run(self):$/;"	m	class:ConfigReader
run	bin/processSummary.py	/^  def run(self):$/;"	m	class:LogSummarizer
run	config/BuildSystem/maker.py	/^  def run(self, setupOnly = 0):$/;"	m	class:Make
run	config/BuildSystem/regression/buildtest.py	/^  def run(self):$/;"	m	class:RemoteBuild
run	config/BuildSystem/script.py	/^          def run(self):$/;"	m	class:Script.executeShellCommand.runInShell.InShell
run	config/PETSc/FEM.py	/^  def run(self, elements, bdElements, numBlocks, operator, filename = ''):$/;"	m	class:QuadratureGenerator
run	config/builder.py	/^ def run(self):$/;"	m	class:PETScMaker
run	config/install.py	/^  def run(self):$/;"	f
run	src/dm/impls/mesh/examples/tests/memoryTests.py	/^  def run(self):$/;"	m	class:MemoryTests
run	src/dm/impls/mesh/examples/tests/sieveTests.py	/^  def run(self):$/;"	m	class:SieveTests
runInShell	config/BuildSystem/script.py	/^    def runInShell(command, log, cwd):$/;"	f	function:Script.executeShellCommand
runShellCommand	config/BuildSystem/script.py	/^    def runShellCommand(command, log = None, cwd = None):$/;"	f	function:Script.importModule
runShellCommand	config/BuildSystem/script.py	/^    def runShellCommand(command, log=None, cwd=None):$/;"	f	function:Script.importModule
runShellCommand	config/BuildSystem/script.py	/^  runShellCommand = staticmethod(runShellCommand)$/;"	v	class:Script
runShellCommandParallel	config/builder.py	/^ def runShellCommandParallel(self, command, cwd = None):$/;"	m	class:PETScMaker
runTensorProduct	config/PETSc/FEM.py	/^  def runTensorProduct(self, dim, elements, numBlocks, operator, filename = ''):$/;"	m	class:QuadratureGenerator
runTest	config/builder.py	/^ def runTest(self, testDir, executable, testNum, replace, **params):$/;"	m	class:PETScMaker
runcmd	bin/taucc.py	/^def runcmd(cmd,verbose):$/;"	f
runcopy	config/install.py	/^  def runcopy(self):$/;"	f
rundone	config/install.py	/^  def rundone(self):$/;"	f
runfix	config/install.py	/^  def runfix(self):$/;"	f
runkernel	include/petsc-private/threadcommimpl.h	/^  PetscErrorCode (*runkernel)(PetscThreadComm,PetscThreadCommJobCtx);$/;"	m	struct:_PetscThreadCommOps
runsetup	config/install.py	/^  def runsetup(self):$/;"	f
rvalues	include/petsc-private/matimpl.h	/^  PetscScalar   **rvalues;              \/* receiving data (values) *\/$/;"	m	struct:__anon1
rvalues	include/petsc-private/vecimpl.h	/^  PetscScalar   *svalues,*rvalues;      \/* sending and receiving data *\/$/;"	m	struct:__anon24
s	include/petsc-private/dmdaimpl.h	/^  PetscInt              s;                     \/* stencil width *\/$/;"	m	struct:__anon23
s	include/petsc-private/meshimpl.h	/^  ALE::Obj<PETSC_MESH_TYPE::int_section_type> s;$/;"	m	struct:_p_SectionInt
s	include/petsc-private/meshimpl.h	/^  ALE::Obj<PETSC_MESH_TYPE::real_section_type> s;$/;"	m	struct:_p_SectionReal
same_nonzero	include/petsc-private/matimpl.h	/^  PetscBool              same_nonzero;     \/* matrix has same nonzero pattern as previous *\/$/;"	m	struct:_p_Mat
sanitize	config/PETSc/utilities/cacheDetails.py	/^  def sanitize(self,val):$/;"	m	class:CacheAttribute
save	config/BuildSystem/RDict.py	/^  def save(self, force = 0):$/;"	m	class:RDict
save	config/BuildSystem/sourceDatabase.py	/^  def save(self, force = 0):$/;"	m	class:SourceDB
save	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*save)(PetscDraw);$/;"	m	struct:_PetscDrawOps
savefilecount	include/petsc-private/drawimpl.h	/^  PetscInt        savefilecount;$/;"	m	struct:_p_PetscDraw
savefilemovie	include/petsc-private/drawimpl.h	/^  PetscBool       savefilemovie;$/;"	m	struct:_p_PetscDraw
savefilename	include/petsc-private/drawimpl.h	/^  char            *savefilename;$/;"	m	struct:_p_PetscDraw
saveonflush	include/petsc-private/drawimpl.h	/^  PetscBool       saveonflush;       \/* save a new image for every PetscDrawFlush() called *\/$/;"	m	struct:_p_PetscDraw
sax_end_document	include/petscdmmesh_formats.hh	/^      static void sax_end_document(void *ctx) {};$/;"	f	class:ALE::Dolfin::Builder
sax_end_element	include/petscdmmesh_formats.hh	/^      static void sax_end_element(void *ctx, const xmlChar *name) {$/;"	f	class:ALE::Dolfin::Builder
sax_error	include/petscdmmesh_formats.hh	/^      static void sax_error(void *ctx, const char *msg, ...) {$/;"	f	class:ALE::Dolfin::Builder
sax_fatal_error	include/petscdmmesh_formats.hh	/^      static void sax_fatal_error(void *ctx, const char *msg, ...) {$/;"	f	class:ALE::Dolfin::Builder
sax_start_document	include/petscdmmesh_formats.hh	/^      static void sax_start_document(void *ctx) {};$/;"	f	class:ALE::Dolfin::Builder
sax_start_element	include/petscdmmesh_formats.hh	/^      static void sax_start_element(void *ctx, const xmlChar *name, const xmlChar **attrs) {$/;"	f	class:ALE::Dolfin::Builder
sax_warning	include/petscdmmesh_formats.hh	/^      static void sax_warning(void *ctx, const char *msg, ...) {$/;"	f	class:ALE::Dolfin::Builder
scaP	include/petsc-private/snesimpl.h	/^  void *scaP;                    \/* scaling context *\/$/;"	m	struct:_p_SNES
scalar_idmax	include/petsc-private/petscimpl.h	/^  PetscInt             scalar_idmax,        scalarstar_idmax;$/;"	m	struct:_p_PetscObject
scalarcomposeddata	include/petsc-private/petscimpl.h	/^  PetscScalar          *scalarcomposeddata, **scalarstarcomposeddata;$/;"	m	struct:_p_PetscObject
scalarcomposedstate	include/petsc-private/petscimpl.h	/^  PetscInt             *scalarcomposedstate,*scalarstarcomposedstate;$/;"	m	struct:_p_PetscObject
scalars	include/petsc-private/threadcommimpl.h	/^  PetscScalar       scalars[3];                    \/* Array to hold three scalar values *\/$/;"	m	struct:_p_PetscThreadCommJobCtx
scalarstar_idmax	include/petsc-private/petscimpl.h	/^  PetscInt             scalar_idmax,        scalarstar_idmax;$/;"	m	struct:_p_PetscObject
scalarstarcomposeddata	include/petsc-private/petscimpl.h	/^  PetscScalar          *scalarcomposeddata, **scalarstarcomposeddata;$/;"	m	struct:_p_PetscObject
scalarstarcomposedstate	include/petsc-private/petscimpl.h	/^  PetscInt             *scalarcomposedstate,*scalarstarcomposedstate;$/;"	m	struct:_p_PetscObject
scale	include/petsc-private/dmpleximpl.h	/^  PetscReal            scale[NUM_PETSC_UNITS];   \/* The scale for each SI unit *\/$/;"	m	struct:__anon30
scale	include/petsc-private/matimpl.h	/^  PetscErrorCode (*scale)(Mat,PetscScalar);$/;"	m	struct:_MatOps
scale	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*scale)(Vec,PetscScalar);                 \/* x = alpha * x   *\/$/;"	m	struct:_VecOps
scale_solve_failed	include/petsc-private/tsimpl.h	/^  PetscReal   scale_solve_failed; \/* Scale step by this factor if solver (linear or nonlinear) fails. *\/$/;"	m	struct:_p_TSAdapt
scaling	include/petsc-private/snesimpl.h	/^  Vec  scaling;                  \/* scaling vector *\/$/;"	m	struct:_p_SNES
scatter	include/petscts.h	/^  VecScatter  scatter;$/;"	m	struct:__anon70
scatterBundle	include/sieve/Distribution.hh	/^    static typename Partitioner::part_type *scatterBundle(const Obj<bundle_type>& bundle, const int dim, const Obj<bundle_type>& bundleNew, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap, const int height = 0) {$/;"	f	class:ALE::Distribution
scatterBundle	include/sieve/Distribution.hh	/^    static void scatterBundle(const Obj<bundle_type>& bundle, const int dim, const Obj<bundle_type>& bundleNew, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap, const std::string& partitioner, const int height = 0, const Obj<bundle_type>& subBundle = NULL, const Obj<bundle_type>& subBundleNew = NULL) {$/;"	f	class:ALE::Distribution
scatterCones	include/sieve/Completion.hh	/^      static void scatterCones(const Obj<SifterType>& sifter, const Obj<SifterType>& sifterNew, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap, Renumbering& renumbering, const Obj<bundle_type>& bundle = NULL) {$/;"	f	class:ALE::New::Completion
scatterCones	include/sieve/Completion.hh	/^      static void scatterCones(const Obj<SifterType>& sifter, const Obj<SifterType>& sifterNew, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap, const Obj<bundle_type>& bundle = NULL, const int minimumHeight = 0) {$/;"	f	class:ALE::New::Completion
scatterSieve	include/sieve/Completion.hh	/^      static void scatterSieve(const Obj<bundle_type>& bundle, const Obj<sieve_type>& sieve, const int dim, const Obj<sieve_type>& sieveNew, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap, const int height, const int numCells, PartitionType assignment[]) {$/;"	f	class:ALE::New::Completion
scatterSupports	include/sieve/Completion.hh	/^      static void scatterSupports(const Obj<SifterType>& sifter, const Obj<SifterType>& sifterNew, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap, const Obj<bundle_type>& bundle = NULL, const int minimumDepth = 0) {$/;"	f	class:ALE::New::Completion
script	bin/configVars.py	/^import script$/;"	i
script	bin/processSummary.py	/^import script$/;"	i
script	config/BuildSystem/RDict.py	/^    import RDict # Need this to locate server script$/;"	i
script	config/BuildSystem/config/base.py	/^import script$/;"	i
script	config/BuildSystem/config/compile/SIDL.py	/^import script$/;"	i
script	config/BuildSystem/config/framework.py	/^import script$/;"	i
script	config/BuildSystem/maker.py	/^import script$/;"	i
script	config/BuildSystem/regression/buildtest.py	/^import script$/;"	i
script	config/BuildSystem/sourceControl.py	/^import script$/;"	i
script	config/PETSc/Configure.py	/^    import script$/;"	i
script	config/PETSc/FEM.py	/^import script$/;"	i
script	config/builder.py	/^import logger, script$/;"	i
script	config/cmakeboot.py	/^import script$/;"	i
script	config/install.py	/^import script$/;"	i
script	src/dm/impls/mesh/examples/tests/memoryTests.py	/^import script$/;"	i
script	src/dm/impls/mesh/examples/tests/sieveTests.py	/^import script$/;"	i
second	include/sieve/ALE_containers.hh	/^    second_type second;$/;"	m	class:ALE::Pair
second_type	include/sieve/ALE_containers.hh	/^    typedef SecondType second_type;$/;"	t	class:ALE::Pair
second_type	include/sieve/Overlap.hh	/^  typedef SecondType second_type;$/;"	t	class:PETSc::DualSequence
section	include/sieve/ISieve.hh	/^      PetscSection section;$/;"	m	class:ALE::ISieveVisitor::SizeWithBCVisitor
section	include/sieve/ISieve.hh	/^      Section&          section;$/;"	m	class:ALE::ISieveVisitor::UpdateAddVisitor
section	include/sieve/ISieve.hh	/^      Section&          section;$/;"	m	class:ALE::ISieveVisitor::UpdateAllVisitor
section	include/sieve/ISieve.hh	/^      Section&          section;$/;"	m	class:ALE::ISieveVisitor::UpdateVisitor
section	include/sieve/ISieve.hh	/^      const PetscSection section;$/;"	m	class:ALE::ISieveVisitor::RestrictVecVisitor
section	include/sieve/ISieve.hh	/^      const PetscSection section;$/;"	m	class:ALE::ISieveVisitor::UpdateVecVisitor
section	include/sieve/ISieve.hh	/^      const PetscSection& section;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
section	include/sieve/ISieve.hh	/^      const Section& section;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
section	include/sieve/ISieve.hh	/^      const Section& section;$/;"	m	class:ALE::ISieveVisitor::RestrictVisitor
section	include/sieve/ISieve.hh	/^      const Section& section;$/;"	m	class:ALE::ISieveVisitor::SizeVisitor
section	include/sieve/ISieve.hh	/^      const Section& section;$/;"	m	class:ALE::ISieveVisitor::SizeWithBCVisitor
section	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^  PetscBool  section;     \/\/ Run the Section tests$/;"	m	struct:__anon14	file:
section	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^  PetscBool  section;     \/\/ Run the Section tests$/;"	m	struct:__anon5	file:
section	src/dm/impls/mesh/examples/tests/unitTests.cxx	/^  PetscBool  section;       \/\/ Run the Section tests$/;"	m	struct:__anon23	file:
section	src/dm/impls/mesh/examples/tutorials/ex4f90.F	/^      type(PetscSection) section$/;"	v	program:main
sectionCompletion	include/sieve/Distribution.hh	/^    typedef typename ALE::New::SectionCompletion<bundle_type, typename bundle_type::real_section_type::value_type> sectionCompletion;$/;"	t	class:ALE::Distribution
sectionCompletion	src/dm/impls/mesh/examples/tests/sieve2-old.cxx	/^typedef ALE::New::Completion<topology_type, ALE::Mesh::section_type::value_type> sectionCompletion;$/;"	t	file:
sectionDist	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^  PetscBool  sectionDist; \/\/ Run the Section distribution tests$/;"	m	struct:__anon5	file:
section_type	include/petscdmmesh_formats.hh	/^      typedef Mesh::real_section_type section_type;$/;"	t	class:ALE::PCICE::Builder
section_type	include/petscdmmesh_formats.hh	/^      typedef Mesh::real_section_type section_type;$/;"	t	class:ALE::PFLOTRAN::Builder
section_type	include/sieve/Field.hh	/^    typedef Section_                                 section_type;$/;"	t	class:ALE::Field
section_type	include/sieve/Sections.hh	/^      typedef ConeSizeSection<Bundle_, Sieve_> section_type;$/;"	t	class:ALE::New::ConeSizeSection
section_type	include/sieve/Sections.hh	/^      typedef Section_                          section_type;$/;"	t	class:ALE::New::ArrowSection
section_type	include/sieve/Sections.hh	/^      typedef Section_                          section_type;$/;"	t	class:ALE::New::SizeSection
section_type	src/dm/impls/mesh/examples/tests/isection1.cxx	/^  typedef Section_ section_type;$/;"	t	class:StressTestSection	file:
section_type	src/dm/impls/mesh/examples/tests/mesh1.cxx	/^typedef ALE::Mesh::real_section_type section_type;$/;"	t	file:
section_type	src/dm/impls/mesh/examples/tests/section1-old.cxx	/^typedef ALE::Test::section_type   section_type;$/;"	t	file:
section_type	src/dm/impls/mesh/examples/tests/section1.cxx	/^typedef ALE::Mesh::real_section_type section_type;$/;"	t	file:
section_type	src/dm/impls/mesh/examples/tests/sectionTest.hh	/^    typedef ALE::Section<sieve_type, double>         section_type;$/;"	t	namespace:ALE::Test
sectiongetarray1df90_	src/dm/impls/mesh/f90-custom/zsectionf90.c	/^void PETSC_STDCALL sectiongetarray1df90_(DM *dm,CHAR name PETSC_MIXED_LEN(len),F90Array1d *ptr,int *ierr PETSC_END_LEN(len) PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
sectiongetarray1df90_	src/dm/impls/mesh/f90-custom/zsectionf90.c	17;"	d	file:
sectiongetarray1df90_	src/dm/impls/mesh/f90-custom/zsectionf90.c	30;"	d	file:
sectiongetarrayf90_	src/dm/impls/mesh/f90-custom/zsectionf90.c	/^void PETSC_STDCALL sectiongetarrayf90_(DM *dm,CHAR name PETSC_MIXED_LEN(len),F90Array2d *ptr,int *ierr PETSC_END_LEN(len) PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
sectiongetarrayf90_	src/dm/impls/mesh/f90-custom/zsectionf90.c	16;"	d	file:
sectiongetarrayf90_	src/dm/impls/mesh/f90-custom/zsectionf90.c	29;"	d	file:
sectionintrestore_	src/dm/impls/mesh/f90-custom/zsectionf90.c	/^void PETSC_STDCALL sectionintrestore_(SectionInt *section, int *point,F90Array1d *ptr,int *ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
sectionintrestore_	src/dm/impls/mesh/f90-custom/zsectionf90.c	22;"	d	file:
sectionintrestore_	src/dm/impls/mesh/f90-custom/zsectionf90.c	9;"	d	file:
sectionintrestrict_	src/dm/impls/mesh/f90-custom/zsectionf90.c	/^void PETSC_STDCALL sectionintrestrict_(SectionInt *section, int *point,F90Array1d *ptr,int *ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
sectionintrestrict_	src/dm/impls/mesh/f90-custom/zsectionf90.c	20;"	d	file:
sectionintrestrict_	src/dm/impls/mesh/f90-custom/zsectionf90.c	7;"	d	file:
sectionintrestrictclosurewitharray_	src/dm/impls/mesh/f90-custom/zsectionf90.c	/^void PETSC_STDCALL sectionintrestrictclosurewitharray_(SectionInt *section, DM *dm, int *point,int *size,F90Array1d *ptr,int *ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
sectionintrestrictclosurewitharray_	src/dm/impls/mesh/f90-custom/zsectionf90.c	11;"	d	file:
sectionintrestrictclosurewitharray_	src/dm/impls/mesh/f90-custom/zsectionf90.c	24;"	d	file:
sectionintupdate_	src/dm/impls/mesh/f90-custom/zsectionf90.c	/^void PETSC_STDCALL sectionintupdate_(SectionInt *section, int *point,F90Array1d *ptr,InsertMode *mode,int *ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
sectionintupdate_	src/dm/impls/mesh/f90-custom/zsectionf90.c	13;"	d	file:
sectionintupdate_	src/dm/impls/mesh/f90-custom/zsectionf90.c	26;"	d	file:
sectionintupdateclosure_	src/dm/impls/mesh/f90-custom/zsectionf90.c	/^void PETSC_STDCALL sectionintupdateclosure_(SectionInt *section, DM *dm, int *point,F90Array1d *ptr,InsertMode *mode,int *ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
sectionintupdateclosure_	src/dm/impls/mesh/f90-custom/zsectionf90.c	15;"	d	file:
sectionintupdateclosure_	src/dm/impls/mesh/f90-custom/zsectionf90.c	28;"	d	file:
sectionintview_	src/dm/impls/mesh/ftn-custom/zsection.c	/^void PETSC_STDCALL sectionintview_(SectionInt *x,PetscViewer *vin,PetscErrorCode *ierr)$/;"	f
sectionintview_	src/dm/impls/mesh/ftn-custom/zsection.c	10;"	d	file:
sectionintview_	src/dm/impls/mesh/ftn-custom/zsection.c	6;"	d	file:
sectionrealduplicate_	src/dm/impls/mesh/ftn-custom/zsection.c	/^void PETSC_STDCALL sectionrealduplicate_(SectionReal *section,SectionReal *newSection,PetscErrorCode *ierr)$/;"	f
sectionrealduplicate_	src/dm/impls/mesh/ftn-custom/zsection.c	11;"	d	file:
sectionrealduplicate_	src/dm/impls/mesh/ftn-custom/zsection.c	7;"	d	file:
sectionrealrestore_	src/dm/impls/mesh/f90-custom/zsectionf90.c	/^void PETSC_STDCALL sectionrealrestore_(SectionReal *section, int *point,F90Array1d *ptr,int *ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
sectionrealrestore_	src/dm/impls/mesh/f90-custom/zsectionf90.c	21;"	d	file:
sectionrealrestore_	src/dm/impls/mesh/f90-custom/zsectionf90.c	8;"	d	file:
sectionrealrestrict_	src/dm/impls/mesh/f90-custom/zsectionf90.c	/^void PETSC_STDCALL sectionrealrestrict_(SectionReal *section, int *point,F90Array1d *ptr,int *ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
sectionrealrestrict_	src/dm/impls/mesh/f90-custom/zsectionf90.c	19;"	d	file:
sectionrealrestrict_	src/dm/impls/mesh/f90-custom/zsectionf90.c	6;"	d	file:
sectionrealrestrictclosurewitharray_	src/dm/impls/mesh/f90-custom/zsectionf90.c	/^void PETSC_STDCALL sectionrealrestrictclosurewitharray_(SectionReal *section, DM *dm, int *point,int *size,F90Array1d *ptr,int *ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
sectionrealrestrictclosurewitharray_	src/dm/impls/mesh/f90-custom/zsectionf90.c	10;"	d	file:
sectionrealrestrictclosurewitharray_	src/dm/impls/mesh/f90-custom/zsectionf90.c	23;"	d	file:
sectionrealupdate_	src/dm/impls/mesh/f90-custom/zsectionf90.c	/^void PETSC_STDCALL sectionrealupdate_(SectionReal *section, int *point,F90Array1d *ptr,InsertMode *mode,int *ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
sectionrealupdate_	src/dm/impls/mesh/f90-custom/zsectionf90.c	12;"	d	file:
sectionrealupdate_	src/dm/impls/mesh/f90-custom/zsectionf90.c	25;"	d	file:
sectionrealupdateclosure_	src/dm/impls/mesh/f90-custom/zsectionf90.c	/^void PETSC_STDCALL sectionrealupdateclosure_(SectionReal *section, DM *dm, int *point,F90Array1d *ptr,InsertMode *mode,int *ierr PETSC_F90_2PTR_PROTO(ptrd))$/;"	f
sectionrealupdateclosure_	src/dm/impls/mesh/f90-custom/zsectionf90.c	14;"	d	file:
sectionrealupdateclosure_	src/dm/impls/mesh/f90-custom/zsectionf90.c	27;"	d	file:
sectionrealview_	src/dm/impls/mesh/ftn-custom/zsection.c	/^void PETSC_STDCALL sectionrealview_(SectionReal *x,PetscViewer *vin,PetscErrorCode *ierr)$/;"	f
sectionrealview_	src/dm/impls/mesh/ftn-custom/zsection.c	5;"	d	file:
sectionrealview_	src/dm/impls/mesh/ftn-custom/zsection.c	9;"	d	file:
seen	include/sieve/ISieve.hh	/^      std::set<typename Sieve::point_type> seen;$/;"	m	class:ALE::ISieveVisitor::TransitiveClosureVisitor
segmentlist	include/sieve/Generator.hh	/^        int *segmentlist;$/;"	m	class:ALE::Triangle::Generator::SegmentVisitor
select	config/BuildSystem/script.py	/^      import select, os$/;"	i
selection	src/dm/impls/mesh/examples/tests/subset.cxx	/^typedef ALE::Selection<ALE::Mesh> selection;$/;"	t	file:
send	config/BuildSystem/RDict.py	/^  def send(self, key = None, value = None, operation = None):$/;"	m	class:RDict
send	include/sieve/BasicCommunication.hh	/^    void send(const int rank, const int num, const value_type *data) {$/;"	f	class:ALE::MPIMover
sendPacket	config/BuildSystem/RDict.py	/^  def sendPacket(self, s, packet, source = 'Unknown', isPickled = 0):$/;"	m	class:RDict
send_overlap_alloc_type	include/sieve/Topology.hh	/^    typedef typename alloc_type::template rebind<send_overlap_type>::other   send_overlap_alloc_type;$/;"	t	class:ALE::Topology
send_overlap_ptr	include/sieve/Topology.hh	/^    typedef typename send_overlap_alloc_type::pointer                        send_overlap_ptr;$/;"	t	class:ALE::Topology
send_overlap_type	include/sieve/CartesianSieve.hh	/^    typedef ALE::Sifter<int,point_type,point_type>                    send_overlap_type;$/;"	t	class:ALE::CartesianBundle
send_overlap_type	include/sieve/CartesianSieve.hh	/^    typedef CartesianBundle::send_overlap_type send_overlap_type;$/;"	t	class:ALE::CartesianMesh
send_overlap_type	include/sieve/Completion.hh	/^      typedef typename ALE::Sifter<point_type, rank_type, point_type>                     send_overlap_type;$/;"	t	class:ALE::New::Completion
send_overlap_type	include/sieve/Distribution.hh	/^    typedef typename bundle_type::send_overlap_type                                     send_overlap_type;$/;"	t	class:ALE::Distribution
send_overlap_type	include/sieve/INumbering.hh	/^    typedef typename bundle_type::send_overlap_type                                              send_overlap_type;$/;"	t	class:ALE::INumberingFactory
send_overlap_type	include/sieve/Mesh.hh	/^    typedef typename ALE::Sifter<point_type,rank_type,point_type>     send_overlap_type;$/;"	t	class:ALE::Bundle
send_overlap_type	include/sieve/Mesh.hh	/^    typedef typename ALE::Sifter<point_type,rank_type,point_type>     send_overlap_type;$/;"	t	class:ALE::IBundle
send_overlap_type	include/sieve/Mesh.hh	/^    typedef typename PETSc::SendOverlap<point_type,rank_type>         send_overlap_type;$/;"	t	class:ALE::IBundle
send_overlap_type	include/sieve/Mesh.hh	/^    typedef typename base_type::send_overlap_type     send_overlap_type;$/;"	t	class:ALE::IMesh
send_overlap_type	include/sieve/Mesh.hh	/^    typedef typename base_type::send_overlap_type     send_overlap_type;$/;"	t	class:ALE::Mesh
send_overlap_type	include/sieve/Numbering.hh	/^    typedef typename bundle_type::send_overlap_type         send_overlap_type;$/;"	t	class:ALE::NumberingFactory
send_overlap_type	include/sieve/Topology.hh	/^    typedef typename ALE::Sifter<int,point_type,point_type>                  send_overlap_type;$/;"	t	class:ALE::Topology
send_overlap_type	src/dm/impls/mesh/examples/tests/overlap2.cxx	/^typedef ALE::Test::OverlapTest::send_overlap_type send_overlap_type;$/;"	t	file:
send_overlap_type	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^      typedef ALE::Sifter<int,point_type,point_type>                                send_overlap_type;$/;"	t	class:ALE::Test::OverlapTest
send_overlap_type	src/dm/impls/mesh/examples/tests/sieve2-old.cxx	/^typedef sectionCompletion::send_overlap_type                      send_overlap_type;$/;"	t	file:
send_section_type	src/dm/impls/mesh/examples/tests/overlap2.cxx	/^typedef ALE::Test::OverlapTest::send_section_type send_section_type;$/;"	t	file:
send_section_type	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^      typedef ALE::New::OverlapValues<send_overlap_type, overlap_topology_type, point_type> send_section_type;$/;"	t	class:ALE::Test::OverlapTest
send_section_type	src/dm/impls/mesh/examples/tests/sieve2-old.cxx	/^typedef sectionCompletion::send_section_type                      send_section_type;$/;"	t	file:
send_sizer_type	include/sieve/Completion.hh	/^      typedef typename ALE::Field<send_overlap_type, int, ALE::Section<point_type, int, int_alloc_type> > send_sizer_type;$/;"	t	class:ALE::New::Completion
send_status	include/petsc-private/matimpl.h	/^  MPI_Status    *send_status;           \/* array of send status *\/$/;"	m	struct:__anon1
send_status	include/petsc-private/vecimpl.h	/^  MPI_Status    *send_status;           \/* array of send status *\/$/;"	m	struct:__anon24
send_waits	include/petsc-private/matimpl.h	/^  MPI_Request   *send_waits;            \/* array of send requests *\/$/;"	m	struct:__anon1
send_waits	include/petsc-private/vecimpl.h	/^  MPI_Request   *send_waits;            \/* array of send requests *\/$/;"	m	struct:__anon24
sendfirst	include/petsc-private/vecimpl.h	/^  PetscBool              sendfirst;$/;"	m	struct:__anon29
sent	include/web/AMS.py	/^sent   = 0   # Number of calls sent to server$/;"	v
sequence_type	include/sieve/ALE_containers.hh	/^      typedef Sequence_                              sequence_type;$/;"	t	class:ALE::IndexSequence::iterator
serial	src/dm/impls/moab/dmmoab.cxx	/^  PetscBool           serial;$/;"	m	struct:__anon2	file:
serve	config/BuildSystem/RDict.py	/^  def serve(self):$/;"	m	class:RDict
server	config/BuildSystem/RDict.py	/^    import RDict # Need this to locate server script$/;"	i
serverLanguages	config/BuildSystem/maker.py	/^  serverLanguages = property(getServerLanguages, setServerLanguages, doc = 'The list of server languages')$/;"	v	class:SIDLMake
serverShutdown	config/BuildSystem/RDict.py	/^  def serverShutdown(self, pid, delay = shutdownDelay):$/;"	m	class:RDict
set	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*set)(Vec,PetscScalar);                        \/* y = alpha  *\/$/;"	m	struct:_VecOps
set	include/petscoptions.h	/^  PetscBool         set;           \/* the user has changed this value in the GUI *\/$/;"	m	struct:_n_PetscOptions
set	include/sieve/ALE_containers.hh	/^    set()        : super(){};$/;"	f	class:ALE::set
set	include/sieve/ALE_containers.hh	/^    set(Point p) : super(){insert(p);};$/;"	f	class:ALE::set
set	include/sieve/ALE_containers.hh	/^    set(const ElementSequence_& eseq) : super(eseq.begin(), eseq.end()){}$/;"	f	class:ALE::set
set	include/sieve/ALE_containers.hh	/^    set(const element_type& e) : super() {insert(e);}$/;"	f	class:ALE::set
set	include/sieve/ALE_containers.hh	/^  class set : public std::set<Element_, typename Element_::less_than,  ALE_ALLOCATOR<Element_> > {$/;"	c	namespace:ALE
set	include/sieve/Field.hh	/^    void set(const value_type value) {$/;"	f	class:ALE::FEMSection
set	include/sieve/Field.hh	/^    void set(const value_type value) {$/;"	f	class:ALE::GeneralSection
set	include/sieve/LabelSifter.hh	/^      set_type set;$/;"	m	struct:ALE::NewSifterDef::ArrowContainer
set	include/sieve/Sieve.hh	/^      set_type set;$/;"	m	struct:ALE::SieveDef::RecContainer
set	include/sieve/Sifter.hh	/^      set_type set;$/;"	m	struct:ALE::SifterDef::ArrowContainer
set	include/sieve/Sifter.hh	/^      set_type set;$/;"	m	struct:ALE::SifterDef::RecContainer
setArch	config/BuildSystem/config/package.py	/^  def setArch(self, arch):$/;"	m	class:Package
setArgDB	config/BuildSystem/args.py	/^  def setArgDB(self, argDB):$/;"	m	class:ArgumentProcessor
setArgDB	config/BuildSystem/config/compile/C.py	/^  def setArgDB(self, argDB):$/;"	m	class:DynamicLinker
setArgDB	config/BuildSystem/config/compile/C.py	/^  def setArgDB(self, argDB):$/;"	m	class:Linker
setArgDB	config/BuildSystem/config/compile/C.py	/^  def setArgDB(self, argDB):$/;"	m	class:SharedLinker
setArgDB	config/BuildSystem/config/compile/Cxx.py	/^  def setArgDB(self, argDB):$/;"	m	class:Linker
setArgDB	config/BuildSystem/config/compile/Cxx.py	/^  def setArgDB(self, argDB):$/;"	m	class:SharedLinker
setArgDB	config/BuildSystem/config/compile/FC.py	/^  def setArgDB(self, argDB):$/;"	m	class:Linker
setArgDB	config/BuildSystem/config/compile/processor.py	/^  def setArgDB(self, argDB):$/;"	m	class:Processor
setArgDB	config/BuildSystem/script.py	/^  def setArgDB(self, argDB):$/;"	m	class:LanguageProcessor
setArrowSection	include/sieve/CartesianSieve.hh	/^    void setArrowSection(const std::string& name, const Obj<arrow_section_type>& section) {$/;"	f	class:ALE::CartesianBundle
setArrowSection	include/sieve/Mesh.hh	/^    void setArrowSection(const std::string& name, const Obj<arrow_section_type>& section) {$/;"	f	class:ALE::Bundle
setArrowSection	include/sieve/Mesh.hh	/^    void setArrowSection(const std::string& name, const Obj<arrow_section_type>& section) {$/;"	f	class:ALE::IBundle
setAtlas	include/sieve/Field.hh	/^    void setAtlas(const Obj<atlas_type>& atlas) {this->_atlas = atlas;}$/;"	f	class:ALE::NewUniformSection
setAtlas	include/sieve/Field.hh	/^    void setAtlas(const Obj<atlas_type>& atlas) {this->_atlas = atlas;};$/;"	f	class:ALE::FEMSection
setAtlas	include/sieve/Field.hh	/^    void setAtlas(const Obj<atlas_type>& atlas) {this->_atlas = atlas;};$/;"	f	class:ALE::GeneralSection
setAtlas	include/sieve/Field.hh	/^    void setAtlas(const Obj<atlas_type>& atlas) {this->_atlas = atlas;};$/;"	f	class:ALE::Section
setAtlas	include/sieve/Field.hh	/^    void setAtlas(const Obj<atlas_type>& atlas) {this->_atlas = atlas;};$/;"	f	class:ALE::UniformSection
setAtlas	include/sieve/IField.hh	/^    void setAtlas(const Obj<atlas_type>& atlas) {this->_atlas = atlas;};$/;"	f	class:ALE::IUniformSection
setAtlas	include/sieve/Sections.hh	/^    void setAtlas(const Obj<atlas_type>& atlas) {this->_atlas = atlas;};$/;"	f	class:ALE::ConeSection
setAtlas	include/sieve/Sections.hh	/^    void setAtlas(const Obj<atlas_type>& atlas) {this->_atlas = atlas;};$/;"	f	class:ALE::ConeSectionV
setAtlas	include/sieve/Sections.hh	/^    void setAtlas(const Obj<atlas_type>& atlas) {this->_atlas = atlas;};$/;"	f	class:ALE::ConeSizeSection
setAtlas	include/sieve/Sections.hh	/^    void setAtlas(const Obj<atlas_type>& atlas) {this->_atlas = atlas;};$/;"	f	class:ALE::ConeSizeSectionV
setAtlas	include/sieve/Sections.hh	/^    void setAtlas(const Obj<atlas_type>& atlas) {this->_atlas = atlas;};$/;"	f	class:ALE::LabelSection
setAtlas	include/sieve/Sections.hh	/^    void setAtlas(const Obj<atlas_type>& atlas) {this->_atlas = atlas;};$/;"	f	class:ALE::OrientedConeSectionV
setBC	include/sieve/Field.hh	/^    void setBC(const Obj<bc_type>& bc) {this->_bc = bc;};$/;"	f	class:ALE::FEMSection
setBC	include/sieve/Field.hh	/^    void setBC(const Obj<bc_type>& bc) {this->_bc = bc;};$/;"	f	class:ALE::GeneralSection
setBC	include/sieve/ISieve.hh	/^      bool                setBC;           \/\/ If true, returns indices for constrained dofs, otherwise negative values are returned$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
setBaseSize	include/sieve/Overlap.hh	/^  void setBaseSize(index_type size) {$/;"	f	class:PETSc::SendOverlap
setBaseSize	include/sieve/Sifter.hh	/^    void setBaseSize(int size) {};$/;"	f	class:ALE::ASifter
setBasis	include/sieve/Mesh.hh	/^    void          setBasis(const PetscReal *basis) {this->_basis = basis;};$/;"	f	class:ALE::Discretization
setBasisDerivatives	include/sieve/Mesh.hh	/^    void          setBasisDerivatives(const PetscReal *basisDer) {this->_basisDer = basisDer;};$/;"	f	class:ALE::Discretization
setBasisSize	include/sieve/FEMProblem.hh	/^      virtual void          setBasisSize(const int size) {this->_basisSize = size;};$/;"	f	class:ALE::Problem::GeneralDiscretization
setBasisSize	include/sieve/Mesh.hh	/^    void          setBasisSize(const int size) {this->_basisSize = size;};$/;"	f	class:ALE::Discretization
setBoundaryCondition	include/sieve/CartesianSieve.hh	/^    void setBoundaryCondition(const Obj<BoundaryCondition>& boundaryCondition) {this->_boundaryCondition = boundaryCondition;};$/;"	f	class:ALE::CartesianMesh
setBoundaryCondition	include/sieve/FEMProblem.hh	/^      virtual void setBoundaryCondition(const Obj<GeneralBoundaryCondition>& boundaryCondition) {this->setBoundaryCondition("default", boundaryCondition);};$/;"	f	class:ALE::Problem::GeneralDiscretization
setBoundaryCondition	include/sieve/FEMProblem.hh	/^      virtual void setBoundaryCondition(const std::string& name, const Obj<GeneralBoundaryCondition>& boundaryCondition) {this->_boundaryConditions[name] = boundaryCondition;};$/;"	f	class:ALE::Problem::GeneralDiscretization
setBoundaryCondition	include/sieve/Mesh.hh	/^    void setBoundaryCondition(const Obj<BoundaryCondition>& boundaryCondition) {this->setBoundaryCondition("default", boundaryCondition);};$/;"	f	class:ALE::Discretization
setBoundaryCondition	include/sieve/Mesh.hh	/^    void setBoundaryCondition(const std::string& name, const Obj<BoundaryCondition>& boundaryCondition) {this->_boundaryConditions[name] = boundaryCondition;};$/;"	f	class:ALE::Discretization
setCalculatedOverlap	include/sieve/Mesh.hh	/^    void setCalculatedOverlap(const bool calc) {this->_calculatedOverlap = calc;};$/;"	f	class:ALE::Bundle
setCalculatedOverlap	include/sieve/Mesh.hh	/^    void setCalculatedOverlap(const bool calc) {this->_calculatedOverlap = calc;};$/;"	f	class:ALE::IMesh
setCapSize	include/sieve/Overlap.hh	/^  void setCapSize(index_type size) {$/;"	f	class:PETSc::RecvOverlap
setCapSize	include/sieve/Sifter.hh	/^    void setCapSize(int size) {};$/;"	f	class:ALE::ASifter
setCell	include/sieve/FEMProblem.hh	/^      virtual void setCell(Obj<PETSC_MESH_TYPE> mesh, PETSC_MESH_TYPE::point_type c) const { \/\/implementations should set some state of the derived type to the present cell$/;"	f	class:ALE::Problem::GenericFormSubProblem
setCell	include/sieve/Partitioner.hh	/^      void setCell(const typename Sieve::point_type cell) {this->cell = cell;};$/;"	f	class:ALE::Partitioner::AdjVisitor
setCell	include/sieve/Partitioner.hh	/^      void setCell(const typename Sieve::point_type& c) {this->cell = c;};$/;"	f	class:ALE::Partitioner::MeetVisitor
setCell	include/sieve/UFCProblem.hh	/^      virtual void setCell(Obj<PETSC_MESH_TYPE> mesh, PETSC_MESH_TYPE::point_type c) const {$/;"	f	class:ALE::Problem::UFCFormSubProblem
setCell	include/sieve/UFCProblem.hh	/^      virtual void setCell(ufc::cell * cell) {$/;"	f	class:ALE::Problem::UFCCellIntegral
setCell	include/sieve/UFCProblem.hh	/^      void setCell(Obj<PETSC_MESH_TYPE> m, PETSC_MESH_TYPE::point_type c) {$/;"	f	class:ALE::Problem::UFCHook
setCell	include/sieve/UFCProblem.hh	/^      void setCell(ufc::cell * cell) {$/;"	f	class:ALE::Problem::UFCBoundaryCondition
setCell	include/sieve/UFCProblem.hh	/^      void setCell(ufc::cell * cell) {_cell = cell;};$/;"	f	class:ALE::Problem::UFCDiscretization
setChart	include/sieve/Field.hh	/^    void setChart(chart_type& chart) {};$/;"	f	class:ALE::Section
setChart	include/sieve/Field.hh	/^    void setChart(const chart_type& chart) {throw ALE::Exception("setChart() for GeneralSection is invalid");};$/;"	f	class:ALE::GeneralSection
setChart	include/sieve/IField.hh	/^    void setChart(const chart_type& chart) {$/;"	f	class:ALE::IGeneralSection
setChart	include/sieve/IField.hh	/^    void setChart(const chart_type& chart) {$/;"	f	class:ALE::ISection
setChart	include/sieve/IField.hh	/^    void setChart(const chart_type& chart) {$/;"	f	class:ALE::IUniformSection
setChart	include/sieve/IField.hh	/^    void setChart(const chart_type& chart) {this->_chart = chart;};$/;"	f	class:ALE::IConstantSection
setChart	include/sieve/ISieve.hh	/^    void setChart(const chart_type& chart) {$/;"	f	class:ALE::IFSieve
setChart	include/sieve/LabelSifter.hh	/^    void setChart(const chart_type& chart) {}$/;"	f	class:ALE::LabelSifter
setClassName	include/sieve/ALE_containers.hh	/^    void               setClassName(const std::string& name) {this->_className = name;};$/;"	f	class:ALE::ParallelObject
setCleanup	config/BuildSystem/config/framework.py	/^  def setCleanup(self, doCleanup):$/;"	m	class:Framework
setClientLanguages	config/BuildSystem/maker.py	/^  def setClientLanguages(self, clientLanguages):$/;"	m	class:SIDLMake
setColor	include/sieve/Sifter.hh	/^    void setColor(const typename traits::source_type& s, const typename traits::target_type& t, const typename traits::color_type& color) {$/;"	f	class:ALE::Sifter
setComm	include/sieve/ALE_mem.hh	/^    void     setComm(MPI_Comm comm) {$/;"	f	class:ALE::MemoryLogger
setCompilerObject	config/BuildSystem/script.py	/^  def setCompilerObject(self, language, compiler):$/;"	m	class:LanguageProcessor
setCompilers	config/BuildSystem/build/compile/Cxx.py	/^    import config.setCompilers$/;"	i
setCompilers	config/BuildSystem/config/compilerOptions.py	/^    import config.setCompilers$/;"	i
setCompilers	config/BuildSystem/config/compilers.py	/^    import config.setCompilers$/;"	i
setCompilers	config/PETSc/packages/Suggar.py	/^    import config.setCompilers$/;"	i
setCompilers	config/PETSc/packages/Triangle.py	/^      import config.setCompilers$/;"	i
setCompilers	config/PETSc/packages/cuda.py	/^    import config.setCompilers$/;"	i
setCompilers	config/PETSc/packages/elemental.py	/^    import config.setCompilers$/;"	i
setCompilers	config/PETSc/packages/hypre.py	/^    import config.setCompilers$/;"	i
setCompilers	config/PETSc/packages/ml.py	/^    import config.setCompilers$/;"	i
setCone	include/sieve/ISieve.hh	/^    void setCone(const point_type cone, const point_type& p) {$/;"	f	class:ALE::IFSieve
setCone	include/sieve/ISieve.hh	/^    void setCone(const point_type cone[], const point_type& p) {$/;"	f	class:ALE::IFSieve
setCone	include/sieve/LabelSifter.hh	/^    void setCone(const Obj<sourceInputSequence>& sources, const typename traits::target_type& target) {$/;"	f	class:ALE::LabelSifter
setCone	include/sieve/LabelSifter.hh	/^    void setCone(const typename traits::source_type& source, const typename traits::target_type& target){$/;"	f	class:ALE::LabelSifter
setCone	include/sieve/Sifter.hh	/^    void setCone(const Obj<sourceInputSequence>& sources, const typename traits::target_type& target) {$/;"	f	class:ALE::ASifter
setCone	include/sieve/Sifter.hh	/^    void setCone(const Obj<sourceInputSequence>& sources, const typename traits::target_type& target, const typename traits::color_type& color){$/;"	f	class:ALE::ASifter
setCone	include/sieve/Sifter.hh	/^    void setCone(const typename traits::source_type& source, const typename traits::target_type& target){$/;"	f	class:ALE::ASifter
setCone	include/sieve/Sifter.hh	/^    void setCone(const typename traits::source_type& source, const typename traits::target_type& target, const typename traits::color_type& color) {$/;"	f	class:ALE::ASifter
setConeOrientation	include/sieve/ISieve.hh	/^    void setConeOrientation(const int coneOrientation[], const point_type& p) {$/;"	f	class:ALE::IFSieve
setConeSize	include/sieve/ISieve.hh	/^    void setConeSize(const point_type& p, const index_type c) {$/;"	f	class:ALE::IFSieve
setConeSize	include/sieve/LabelSifter.hh	/^    void setConeSize(target_type p, int s) {}$/;"	f	class:ALE::LabelSifter
setConeSize	include/sieve/Overlap.hh	/^  void setConeSize(rank_type rank, index_type size) {$/;"	f	class:PETSc::SendOverlap
setConeSize	include/sieve/Sifter.hh	/^    void setConeSize(const typename traits::target_type& p, int size) {};$/;"	f	class:ALE::ASifter
setConfigureParent	config/BuildSystem/config/framework.py	/^  def setConfigureParent(self, parent):$/;"	m	class:Framework
setConstraintDimension	include/sieve/Field.hh	/^    void setConstraintDimension(const point_type& p, const int numConstraints) {$/;"	f	class:ALE::FEMSection
setConstraintDimension	include/sieve/Field.hh	/^    void setConstraintDimension(const point_type& p, const int numConstraints) {$/;"	f	class:ALE::GeneralSection
setConstraintDimension	include/sieve/Field.hh	/^    void setConstraintDimension(const point_type& p, const int numConstraints) {$/;"	f	class:ALE::Section
setConstraintDimension	include/sieve/Field.hh	/^    void setConstraintDimension(const point_type& p, const int numConstraints, const int space) {$/;"	f	class:ALE::FEMSection
setConstraintDimension	include/sieve/Field.hh	/^    void setConstraintDimension(const point_type& p, const int numConstraints, const int space) {$/;"	f	class:ALE::GeneralSection
setConstraintDimension	include/sieve/Field.hh	/^    void setConstraintDimension(const point_type& p, const int numConstraints, const int space) {$/;"	f	class:ALE::Section
setConstraintDof	include/sieve/Field.hh	/^    void setConstraintDof(const point_type& p, const int dofs[]) {$/;"	f	class:ALE::GeneralSection
setConstraintDof	include/sieve/Field.hh	/^    void setConstraintDof(const point_type& p, const int dofs[]) {};$/;"	f	class:ALE::Section
setConstraintDof	include/sieve/Field.hh	/^    void setConstraintDof(const point_type& p, const int dofs[], const int space) {$/;"	f	class:ALE::GeneralSection
setCustomAtlas	include/sieve/Field.hh	/^    int setCustomAtlas(const int restrictOffsets[], const int restrictIndices[], const int updateOffsets[], const int updateIndices[], bool autoFree = true) {$/;"	f	class:ALE::GeneralSection
setDebug	include/sieve/ALE_containers.hh	/^    void               setDebug(const int debug) {this->_debug = debug;};$/;"	f	class:ALE::ParallelObject
setDebug	include/sieve/ALE_mem.hh	/^    void setDebug(int debug) {_debug = debug;};$/;"	f	class:ALE::MemoryLogger
setDebug	include/sieve/LabelSifter.hh	/^    void        setDebug(const int debug) {this->_debug = debug;};$/;"	f	class:ALE::LabelSifter
setDebug	include/sieve/Sifter.hh	/^    void        setDebug(const int debug) {this->_debug = debug;};$/;"	f	class:ALE::ASifter
setDefault	include/sieve/IField.hh	/^    void setDefault(const value_type v[]) {for(int i = 0; i < fiberDim; ++i) {this->_emptyValue.v[i] = v[i];}}$/;"	f	class:ALE::IUniformSection
setDefaultInstallDir	config/BuildSystem/config/package.py	/^  def setDefaultInstallDir(self, defaultInstallDir):$/;"	m	class:Package
setDefaultLanguage	config/BuildSystem/config/package.py	/^  def setDefaultLanguage(self, defaultLanguage):$/;"	m	class:Package
setDefaultPrecision	config/BuildSystem/config/packages/BlasLapack.py	/^  def setDefaultPrecision(self, defaultPrecision):$/;"	m	class:Configure
setDefaultPrecision	config/BuildSystem/config/packages/f2cblaslapack.py	/^  def setDefaultPrecision(self, defaultPrecision):$/;"	m	class:Configure
setDefaultValue	include/sieve/Field.hh	/^    void setDefaultValue(const value_type value) {this->_value[1] = value;};$/;"	f	class:ALE::ConstantSection
setDefaultValue	include/sieve/IField.hh	/^    void setDefaultValue(const value_type value) {this->_value[1] = value;};$/;"	f	class:ALE::IConstantSection
setDepth	include/sieve/Mesh.hh	/^    virtual void setDepth(const int depth) {this->_maxDepth = depth;};$/;"	f	class:ALE::IBundle
setDepth	include/sieve/Mesh.hh	/^    virtual void setDepth(const point_type& point, const int depth) {$/;"	f	class:ALE::IBundle
setDescription	config/BuildSystem/help.py	/^  def setDescription(self, section, name, desc):$/;"	m	class:Help
setDescription	config/BuildSystem/help.py	/^  def setDescription(self, section, name, desc):$/;"	m	class:Info
setDimension	include/sieve/Mesh.hh	/^    void setDimension(const int dim) {this->_dim = dim;};$/;"	f	class:ALE::IMesh
setDimension	include/sieve/Mesh.hh	/^    void setDimension(const int dim) {this->_dim = dim;};$/;"	f	class:ALE::Mesh
setDiscretization	include/sieve/CartesianSieve.hh	/^    void setDiscretization(const Obj<Discretization>& discretization) {this->_discretization = discretization;};$/;"	f	class:ALE::CartesianMesh
setDiscretization	include/sieve/FEMProblem.hh	/^      void setDiscretization(const Obj<GeneralDiscretization>& disc) {this->setDiscretization("default", disc);};$/;"	f	class:ALE::Problem::GenericFormSubProblem
setDiscretization	include/sieve/FEMProblem.hh	/^      void setDiscretization(const std::string& name, const Obj<GeneralDiscretization>& disc) {this->_discretizations[name] = disc;};$/;"	f	class:ALE::Problem::GenericFormSubProblem
setDiscretization	include/sieve/Mesh.hh	/^    void setDiscretization(const Obj<Discretization>& disc) {this->setDiscretization("default", disc);};$/;"	f	class:ALE::IMesh
setDiscretization	include/sieve/Mesh.hh	/^    void setDiscretization(const Obj<Discretization>& disc) {this->setDiscretization("default", disc);};$/;"	f	class:ALE::Mesh
setDiscretization	include/sieve/Mesh.hh	/^    void setDiscretization(const std::string& name, const Obj<Discretization>& disc) {this->_discretizations[name] = disc;};$/;"	f	class:ALE::IMesh
setDiscretization	include/sieve/Mesh.hh	/^    void setDiscretization(const std::string& name, const Obj<Discretization>& disc) {this->_discretizations[name] = disc;};$/;"	f	class:ALE::Mesh
setDistRecvOverlap	include/sieve/CartesianSieve.hh	/^    void setDistRecvOverlap(const Obj<recv_overlap_type>& overlap) {this->_distRecvOverlap = overlap;};$/;"	f	class:ALE::CartesianBundle
setDistRecvOverlap	include/sieve/Mesh.hh	/^    void setDistRecvOverlap(const Obj<recv_overlap_type>& overlap) {this->_distRecvOverlap = overlap;};$/;"	f	class:ALE::Bundle
setDistRecvOverlap	include/sieve/Topology.hh	/^    void setDistRecvOverlap(const Obj<recv_overlap_type>& overlap) {this->_distRecvOverlap = overlap;};$/;"	f	class:ALE::Topology
setDistSendOverlap	include/sieve/CartesianSieve.hh	/^    void setDistSendOverlap(const Obj<send_overlap_type>& overlap) {this->_distSendOverlap = overlap;};$/;"	f	class:ALE::CartesianBundle
setDistSendOverlap	include/sieve/Mesh.hh	/^    void setDistSendOverlap(const Obj<send_overlap_type>& overlap) {this->_distSendOverlap = overlap;};$/;"	f	class:ALE::Bundle
setDistSendOverlap	include/sieve/Topology.hh	/^    void setDistSendOverlap(const Obj<send_overlap_type>& overlap) {this->_distSendOverlap = overlap;};$/;"	f	class:ALE::Topology
setDofClass	include/sieve/FEMProblem.hh	/^      virtual void          setDofClass(const int dim, const int dofClass) {this->_dim2class[dim] = dofClass;};$/;"	f	class:ALE::Problem::GeneralDiscretization
setDofClass	include/sieve/Mesh.hh	/^    void setDofClass(const int dim, const int dofClass) {this->_dim2class[dim] = dofClass;};$/;"	f	class:ALE::Discretization
setDualIntegrator	include/sieve/Mesh.hh	/^    void setDualIntegrator(integrator_type integrator) {this->_integrator = integrator;};$/;"	f	class:ALE::BoundaryCondition
setDynamicLinkerObject	config/BuildSystem/script.py	/^  def setDynamicLinkerObject(self, language, linker):$/;"	m	class:LanguageProcessor
setExactSolution	include/sieve/FEMProblem.hh	/^      void setExactSolution(Obj<GeneralBoundaryCondition> exactsol) {$/;"	f	class:ALE::Problem::GenericFormSubProblem
setExactSolution	include/sieve/Mesh.hh	/^    void setExactSolution(const Obj<BoundaryCondition>& exactSolution) {this->_exactSolution = exactSolution;};$/;"	f	class:ALE::Discretization
setExternalPackagesDir	config/BuildSystem/config/package.py	/^  def setExternalPackagesDir(self, externalPackagesDir):$/;"	m	class:Package
setExtraArguments	config/BuildSystem/config/compile/processor.py	/^  def setExtraArguments(self, extraArguments):$/;"	m	class:Processor
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const Obj<Sequence>& points, int dim) {$/;"	f	class:ALE::ConstantSection
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const Obj<Sequence>& points, int dim) {$/;"	f	class:ALE::FEMSection
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const Obj<Sequence>& points, int dim) {$/;"	f	class:ALE::FauxConstantSection
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const Obj<Sequence>& points, int dim) {$/;"	f	class:ALE::GeneralSection
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const Obj<Sequence>& points, int dim) {$/;"	f	class:ALE::NewUniformSection
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const Obj<Sequence>& points, int dim) {$/;"	f	class:ALE::Section
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const Obj<Sequence>& points, int dim) {$/;"	f	class:ALE::UniformSection
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const Obj<Sequence>& points, int dim, const int space) {$/;"	f	class:ALE::FEMSection
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const Obj<Sequence>& points, int dim, const int space) {$/;"	f	class:ALE::GeneralSection
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const Obj<Sequence>& points, int dim, const int space) {$/;"	f	class:ALE::Section
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const point_type& p, int dim) {$/;"	f	class:ALE::ConstantSection
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const point_type& p, int dim) {$/;"	f	class:ALE::FEMSection
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const point_type& p, int dim) {$/;"	f	class:ALE::FauxConstantSection
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const point_type& p, int dim) {$/;"	f	class:ALE::GeneralSection
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const point_type& p, int dim) {$/;"	f	class:ALE::NewUniformSection
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const point_type& p, int dim) {$/;"	f	class:ALE::Section
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const point_type& p, int dim) {$/;"	f	class:ALE::UniformSection
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const point_type& p, int dim, const int space) {$/;"	f	class:ALE::FEMSection
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const point_type& p, int dim, const int space) {$/;"	f	class:ALE::GeneralSection
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const point_type& p, int dim, const int space) {this->setFiberDimension(p, dim);};$/;"	f	class:ALE::Section
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const std::set<point_type>& points, int dim) {$/;"	f	class:ALE::NewUniformSection
setFiberDimension	include/sieve/Field.hh	/^    void setFiberDimension(const std::set<point_type>& points, int dim) {$/;"	f	class:ALE::UniformSection
setFiberDimension	include/sieve/IField.hh	/^    void setFiberDimension(const Obj<Sequence>& points, int dim) {$/;"	f	class:ALE::IConstantSection
setFiberDimension	include/sieve/IField.hh	/^    void setFiberDimension(const Obj<Sequence>& points, int dim) {$/;"	f	class:ALE::IUniformSection
setFiberDimension	include/sieve/IField.hh	/^    void setFiberDimension(const point_type& p, int dim) {$/;"	f	class:ALE::IConstantSection
setFiberDimension	include/sieve/IField.hh	/^    void setFiberDimension(const point_type& p, int dim) {$/;"	f	class:ALE::IUniformSection
setFiberDimension	include/sieve/IField.hh	/^    void setFiberDimension(const std::set<point_type>& points, int dim) {$/;"	f	class:ALE::IUniformSection
setFiberDimensions	include/sieve/FEMProblem.hh	/^      int setFiberDimensions(const Obj<PETSC_MESH_TYPE> mesh, const Obj<PETSC_MESH_TYPE::real_section_type> s, const Obj<names_type>& discs, names_type& bcLabels) {$/;"	f	class:ALE::Problem::GenericFormSubProblem
setFiberDimensions	include/sieve/Mesh.hh	/^    int setFiberDimensions(const Obj<real_section_type>& s, const Obj<names_type>& discs, names_type& bcLabels) {$/;"	f	class:ALE::IMesh
setFiberDimensions	include/sieve/Mesh.hh	/^    int setFiberDimensions(const Obj<real_section_type>& s, const Obj<names_type>& discs, names_type& bcLabels) {$/;"	f	class:ALE::Mesh
setFileCreatePause	config/BuildSystem/config/framework.py	/^  def setFileCreatePause(self, file_create_pause):$/;"	m	class:Framework
setFiniteElement	include/sieve/UFCProblem.hh	/^      void setFiniteElement(ufc::finite_element * element) {_finite_element = element;};$/;"	f	class:ALE::Problem::UFCDiscretization
setFiniteElement	include/sieve/UFCProblem.hh	/^      void setFiniteElement(ufc::finite_element * finite_element) {$/;"	f	class:ALE::Problem::UFCBoundaryCondition
setFlags	config/BuildSystem/config/compile/processor.py	/^  def setFlags(self, flags):$/;"	m	class:Processor
setFunction	include/sieve/Mesh.hh	/^    void setFunction(function_type func) {this->_func = func;};$/;"	f	class:ALE::BoundaryCondition
setFunction	include/sieve/UFC.hh	/^  void setFunction(PetscScalar (*func)(const double *)) {$/;"	f	class:function_wrapper_scalar
setFunction	include/sieve/UFCProblem.hh	/^      void setFunction(ufc::function * function) {$/;"	f	class:ALE::Problem::UFCBoundaryCondition
setGlobalOffsets	include/sieve/INumbering.hh	/^    void       setGlobalOffsets(const int offsets[]) {$/;"	f	class:ALE::IGlobalOrder
setGlobalOffsets	include/sieve/INumbering.hh	/^    void       setGlobalOffsets(const int offsets[]) {$/;"	f	class:ALE::INumbering
setGlobalOffsets	include/sieve/Numbering.hh	/^    void       setGlobalOffsets(const int offsets[]) {$/;"	f	class:ALE::GlobalOrder
setGlobalOffsets	include/sieve/Numbering.hh	/^    void       setGlobalOffsets(const int offsets[]) {$/;"	f	class:ALE::Numbering
setGlobalOrder	include/sieve/INumbering.hh	/^    void setGlobalOrder(const Obj<ABundle_>& bundle, const std::string& name, const Obj<order_type>& order) {$/;"	f	class:ALE::INumberingFactory
setGlobalOrder	include/sieve/Numbering.hh	/^    void setGlobalOrder(const Obj<ABundle_>& bundle, const std::string& name, const Obj<order_type>& order) {$/;"	f	class:ALE::NumberingFactory
setHeight	include/sieve/Mesh.hh	/^    virtual void setHeight(const int height) {this->_maxHeight = height;};$/;"	f	class:ALE::IBundle
setHeight	include/sieve/Mesh.hh	/^    virtual void setHeight(const point_type& point, const int height) {$/;"	f	class:ALE::IBundle
setHeight	include/sieve/Mesh.hh	/^    void setHeight(const Obj<label_type>& label) {$/;"	f	class:ALE::Bundle
setIncludes	config/BuildSystem/maker.py	/^  def setIncludes(self, includes):$/;"	m	class:SIDLMake
setIndex	include/sieve/Field.hh	/^    void setIndex(const point_type& p, const typename index_type::index_type& index) {$/;"	f	class:ALE::GeneralSection
setIndex	include/sieve/Field.hh	/^    void setIndex(const point_type& p, const typename index_type::index_type& index) {$/;"	f	class:ALE::Section
setIndex	include/sieve/Generator.hh	/^        void setIndex(const int idx) {this->idx = idx; this->v = 0;};$/;"	f	class:ALE::Triangle::Generator::SegmentVisitor
setIndex	include/sieve/INumbering.hh	/^    virtual void setIndex(const point_type& p, const int index) {$/;"	f	class:ALE::IGlobalOrder
setIndex	include/sieve/INumbering.hh	/^    virtual void setIndex(const point_type& point, const int index) {this->updatePoint(point, &index);};$/;"	f	class:ALE::INumbering
setIndex	include/sieve/Numbering.hh	/^    virtual void setIndex(const point_type& p, const int index) {$/;"	f	class:ALE::GlobalOrder
setIndex	include/sieve/Numbering.hh	/^    virtual void setIndex(const point_type& point, const int index) {this->updatePoint(point, &index);};$/;"	f	class:ALE::Numbering
setIndexBC	include/sieve/Field.hh	/^    void setIndexBC(const point_type& p, const typename index_type::index_type& index) {$/;"	f	class:ALE::Section
setIndexBC	include/sieve/Field.hh	/^    void setIndexBC(const point_type& p, const typename index_type::index_type& index) {};$/;"	f	class:ALE::GeneralSection
setIndices	include/sieve/FEMProblem.hh	/^      virtual void       setIndices(const int *indices) {this->_indices = indices;};$/;"	f	class:ALE::Problem::GeneralDiscretization
setIndices	include/sieve/FEMProblem.hh	/^      virtual void       setIndices(const int *indices, const int marker) {$/;"	f	class:ALE::Problem::GeneralDiscretization
setIndices	include/sieve/Mesh.hh	/^    void       setIndices(const int *indices) {this->_indices = indices;};$/;"	f	class:ALE::Discretization
setIndices	include/sieve/Mesh.hh	/^    void       setIndices(const int *indices, const int marker) {$/;"	f	class:ALE::Discretization
setIntSection	include/sieve/CartesianSieve.hh	/^    void setIntSection(const std::string& name, const Obj<int_section_type>& section) {$/;"	f	class:ALE::CartesianBundle
setIntSection	include/sieve/Mesh.hh	/^    void setIntSection(const std::string& name, const Obj<int_section_type>& section) {$/;"	f	class:ALE::Bundle
setIntSection	include/sieve/Mesh.hh	/^    void setIntSection(const std::string& name, const Obj<int_section_type>& section) {$/;"	f	class:ALE::IBundle
setIntegral	include/sieve/FEMProblem.hh	/^      void setIntegral(const Obj<GeneralIntegral>& integral) {this->setIntegral("default", integral);};$/;"	f	class:ALE::Problem::GenericFormSubProblem
setIntegral	include/sieve/FEMProblem.hh	/^      void setIntegral(const std::string& name, const Obj<GeneralIntegral> integral) {this->_integrals[name] = integral;};$/;"	f	class:ALE::Problem::GenericFormSubProblem
setIntegral	include/sieve/UFCProblem.hh	/^      virtual void setIntegral(ufc::cell_integral * integral) {$/;"	f	class:ALE::Problem::UFCCellIntegral
setInteractive	config/BuildSystem/nargs.py	/^def setInteractive(interactive):$/;"	f
setIsCone	include/sieve/ISieve.hh	/^      void setIsCone(const bool isCone) {this->isCone = isCone;};$/;"	f	class:ALE::ISieveVisitor::TransitiveClosureVisitor
setKey	config/BuildSystem/nargs.py	/^  def setKey(self, key):$/;"	m	class:Arg
setKey	include/sieve/LabelSifter.hh	/^        void setKey(const key_type& key) {this->key = key;};$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
setKey	include/sieve/Sifter.hh	/^        void setKey(const key_type& key) {this->key = key;};$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
setLabel	include/sieve/Mesh.hh	/^    void setLabel(const std::string& name, const Obj<label_type>& label) {$/;"	f	class:ALE::Bundle
setLabel	include/sieve/Mesh.hh	/^    void setLabel(const std::string& name, const Obj<label_type>& label) {$/;"	f	class:ALE::IBundle
setLabelMarker	include/sieve/FEMProblem.hh	/^      void setLabelMarker(int newMarker) {$/;"	f	class:ALE::Problem::GeneralIntegral
setLabelName	include/sieve/FEMProblem.hh	/^      virtual void setLabelName(const std::string& name) {this->_labelName = name;};$/;"	f	class:ALE::Problem::GeneralBoundaryCondition
setLabelName	include/sieve/FEMProblem.hh	/^      void setLabelName(name_type newName) {$/;"	f	class:ALE::Problem::GeneralIntegral
setLabelName	include/sieve/Mesh.hh	/^    void setLabelName(const std::string& name) {this->_labelName = name;};$/;"	f	class:ALE::BoundaryCondition
setLabelValue	include/sieve/Mesh.hh	/^      void setLabelValue(const point_type& point, const int value) {$/;"	f	class:ALE::IBundle::LabelVisitor
setLibExt	config/BuildSystem/build/processor.py	/^  def setLibExt(self, ext):$/;"	m	class:Linker
setLimit	include/sieve/ISieve.hh	/^      void setLimit(size_t l) {this->limit = l;};$/;"	f	class:ALE::ISieveVisitor::PointRetriever
setLinewidth	config/BuildSystem/logger.py	/^  def setLinewidth(self, linewidth):$/;"	m	class:Logger
setLinker	config/BuildSystem/build/templates/usingC.py	/^  def setLinker(self, linker):$/;"	m	class:UsingC
setLinker	config/BuildSystem/build/templates/usingCxx.py	/^  def setLinker(self, linker):$/;"	m	class:UsingCxx
setLinkerFlags	config/BuildSystem/build/templates/usingC.py	/^  def setLinkerFlags(self, flags):$/;"	m	class:UsingC
setLinkerFlags	config/BuildSystem/build/templates/usingCxx.py	/^  def setLinkerFlags(self, flags):$/;"	m	class:UsingCxx
setLinkerObject	config/BuildSystem/script.py	/^  def setLinkerObject(self, language, linker):$/;"	m	class:LanguageProcessor
setLocalSize	include/sieve/INumbering.hh	/^    void       setLocalSize(const int size) {this->_localSize = size;};$/;"	f	class:ALE::IGlobalOrder
setLocalSize	include/sieve/INumbering.hh	/^    void       setLocalSize(const int size) {this->_localSize = size;};$/;"	f	class:ALE::INumbering
setLocalSize	include/sieve/Numbering.hh	/^    void       setLocalSize(const int size) {this->_localSize = size;};$/;"	f	class:ALE::GlobalOrder
setLocalSize	include/sieve/Numbering.hh	/^    void       setLocalSize(const int size) {this->_localSize = size;};$/;"	f	class:ALE::Numbering
setMakeModule	config/BuildSystem/maker.py	/^  def setMakeModule(self, module):$/;"	m	class:BasicMake
setMarker	include/sieve/FEMProblem.hh	/^      virtual void setMarker(const int marker) {this->_marker = marker;};$/;"	f	class:ALE::Problem::GeneralBoundaryCondition
setMarker	include/sieve/Mesh.hh	/^    void setMarker(const int marker) {this->_marker = marker;};$/;"	f	class:ALE::BoundaryCondition
setMarker	include/sieve/Sieve.hh	/^    void Sieve<Point_,Marker_,Color_>::setMarker(const Obj<Sequence>& points, const marker_type& marker) {$/;"	f	class:ALE::Sieve
setMarker	include/sieve/Sieve.hh	/^    void Sieve<Point_,Marker_,Color_>::setMarker(const point_type& p, const marker_type& marker) {$/;"	f	class:ALE::Sieve
setMax	include/sieve/ParallelMapping.hh	/^    void setMax(const point_type& maxPoint) {$/;"	f	class:ALE::PointFactory
setMaxDof	include/sieve/Mesh.hh	/^    void setMaxDof(const int maxDof) {this->_maxDof = maxDof;};$/;"	f	class:ALE::IMesh
setName	config/BuildSystem/config/compile/processor.py	/^  def setName(self, name):$/;"	m	class:Processor
setName	include/sieve/ALE_containers.hh	/^    void               setName(const std::string& name) {this->_name = name;};$/;"	f	class:ALE::ParallelObject
setNames	config/BuildSystem/config/package.py	/^  def setNames(self):$/;"	m	class:Package
setNewAtlas	include/sieve/Field.hh	/^    void setNewAtlas(const Obj<atlas_type>& atlas) {this->_atlasNew = atlas;};$/;"	f	class:ALE::GeneralSection
setNewAtlas	include/sieve/Field.hh	/^    void setNewAtlas(const Obj<atlas_type>& atlas) {this->_atlasNew = atlas;};$/;"	f	class:ALE::Section
setNode	config/builder.py	/^  def setNode(self, vertex, deps):$/;"	m	class:NullSourceDatabase
setNode	config/builder.py	/^  def setNode(self, vertex, deps):$/;"	m	class:SourceDatabase
setNode	config/builder.py	/^  def setNode(self, vertex, deps):$/;"	m	class:SourceDatabaseDict
setNumCoefficients	include/sieve/FEMProblem.hh	/^      void setNumCoefficients(int nc) {$/;"	f	class:ALE::Problem::GeneralIntegral
setNumDof	include/sieve/FEMProblem.hh	/^      virtual void          setNumDof(const int dim, const int numDof) {this->_dim2dof[dim] = numDof;};$/;"	f	class:ALE::Problem::GeneralDiscretization
setNumDof	include/sieve/Mesh.hh	/^    void setNumDof(const int dim, const int numDof) {this->_dim2dof[dim] = numDof;};$/;"	f	class:ALE::Discretization
setNumPoints	include/sieve/Overlap.hh	/^  void setNumPoints(rank_type rank, index_type numPoints) {$/;"	f	class:PETSc::Overlap
setNumRanks	include/sieve/Overlap.hh	/^  void setNumRanks(index_type R) {$/;"	f	class:PETSc::Overlap
setOtherIncludes	config/BuildSystem/config/packages/PETSc.py	/^  def setOtherIncludes(self, otherIncludes):$/;"	m	class:Configure
setOtherIncludes	config/PETSc/petsc.py	/^  def setOtherIncludes(self, otherIncludes):$/;"	m	class:Configure
setOtherLibs	config/BuildSystem/config/packages/PETSc.py	/^  def setOtherLibs(self, otherLibs):$/;"	m	class:Configure
setOtherLibs	config/PETSc/petsc.py	/^  def setOtherLibs(self, otherLibs):$/;"	m	class:Configure
setOutput	config/BuildSystem/config/ase.py	/^  def setOutput(self):$/;"	m	class:Configure
setOutput	config/BuildSystem/config/packages/PETSc.py	/^  def setOutput(self):$/;"	m	class:Configure
setOutput	config/BuildSystem/config/python.py	/^  def setOutput(self):$/;"	m	class:Configure
setOutput	config/PETSc/petsc.py	/^  def setOutput(self):$/;"	m	class:Configure
setPatch	include/sieve/Topology.hh	/^    void setPatch(const patch_type& patch, const Obj<sieve_type>& sieve) {$/;"	f	class:ALE::Topology
setPeriodicity	include/sieve/Mesh.hh	/^    void setPeriodicity(const int d, const double length) {this->_periodicity[d] = length;};$/;"	f	class:ALE::IMesh
setPeriodicity	include/sieve/Mesh.hh	/^    void setPeriodicity(const int d, const double length) {this->_periodicity[d] = length;};$/;"	f	class:ALE::Mesh
setPoint	include/sieve/INumbering.hh	/^    void setPoint(const int& index, const point_type& point) {this->_invOrder[index] = point;};$/;"	f	class:ALE::INumbering
setPoint	include/sieve/Numbering.hh	/^    void setPoint(const int& index, const point_type& point) {this->_invOrder[index] = point;};$/;"	f	class:ALE::Numbering
setPrefix	config/BuildSystem/maker.py	/^  def setPrefix(self, prefix):$/;"	m	class:Make
setPreprocessorObject	config/BuildSystem/script.py	/^  def setPreprocessorObject(self, language, preprocessor):$/;"	m	class:LanguageProcessor
setProcessor	config/BuildSystem/build/processor.py	/^  def setProcessor(self, processor):$/;"	m	class:Processor
setProjectRoot	config/BuildSystem/build/fileset.py	/^  def setProjectRoot(self):$/;"	m	class:RootedFileSet
setProjectUrl	config/BuildSystem/build/fileset.py	/^  def setProjectUrl(self, url):$/;"	m	class:RootedFileSet
setQuadraturePoints	include/sieve/Mesh.hh	/^    void          setQuadraturePoints(const PetscReal *points) {this->_points = points;};$/;"	f	class:ALE::Discretization
setQuadratureSize	include/sieve/FEMProblem.hh	/^      virtual void          setQuadratureSize(const int size) {this->_quadSize = size;};$/;"	f	class:ALE::Problem::GeneralDiscretization
setQuadratureSize	include/sieve/Mesh.hh	/^    void          setQuadratureSize(const int size) {this->_quadSize = size;};$/;"	f	class:ALE::Discretization
setQuadratureWeights	include/sieve/Mesh.hh	/^    void          setQuadratureWeights(const PetscReal *weights) {this->_weights = weights;};$/;"	f	class:ALE::Discretization
setRHSFunction	include/sieve/UFCProblem.hh	/^      void setRHSFunction(ufc::function * function) {$/;"	f	class:ALE::Problem::UFCDiscretization
setRealSection	include/sieve/CartesianSieve.hh	/^    void setRealSection(const std::string& name, const Obj<real_section_type>& section) {$/;"	f	class:ALE::CartesianBundle
setRealSection	include/sieve/Mesh.hh	/^    void setRealSection(const std::string& name, const Obj<real_section_type>& section) {$/;"	f	class:ALE::Bundle
setRealSection	include/sieve/Mesh.hh	/^    void setRealSection(const std::string& name, const Obj<real_section_type>& section) {$/;"	f	class:ALE::IBundle
setRecvOverlap	include/sieve/CartesianSieve.hh	/^    void setRecvOverlap(const Obj<recv_overlap_type>& overlap) {this->_recvOverlap = overlap;};$/;"	f	class:ALE::CartesianBundle
setRecvOverlap	include/sieve/Mesh.hh	/^    void setRecvOverlap(const Obj<recv_overlap_type>& overlap) {this->_recvOverlap = overlap;};$/;"	f	class:ALE::Bundle
setRecvOverlap	include/sieve/Mesh.hh	/^    void setRecvOverlap(const Obj<recv_overlap_type>& overlap) {this->_recvOverlap = overlap;};$/;"	f	class:ALE::IMesh
setRecvOverlap	include/sieve/Topology.hh	/^    void setRecvOverlap(const Obj<recv_overlap_type>& overlap) {this->_recvOverlap = overlap;};$/;"	f	class:ALE::Topology
setReorder	include/sieve/FEMProblem.hh	/^      virtual void setReorder(int * order) {$/;"	f	class:ALE::Problem::GenericFormSubProblem
setReorder	include/sieve/FEMProblem.hh	/^      virtual void setReorder(int * reorder) {$/;"	f	class:ALE::Problem::GeneralBoundaryCondition
setReorder	include/sieve/FEMProblem.hh	/^      virtual void setReorder(int * reorder) {$/;"	f	class:ALE::Problem::GeneralDiscretization
setReorder	include/sieve/FEMProblem.hh	/^      virtual void setReorder(int * reorder) {$/;"	f	class:ALE::Problem::GeneralIntegral
setReorder	include/sieve/UFCProblem.hh	/^      virtual void setReorder(const int * _reordering) {$/;"	f	class:ALE::Problem::UFCDiscretization
setReorder	include/sieve/UFCProblem.hh	/^      virtual void setReorder(int * reorder) {$/;"	f	class:ALE::Problem::UFCBoundaryCondition
setRoot	config/BuildSystem/logger.py	/^  def setRoot(self, root):$/;"	m	class:Logger
setRoot	include/petscdmmesh.hh	/^  void setRoot(const point_type& point) {this->p = point;};$/;"	f	class:AdjVisitor
setSection	include/sieve/Field.hh	/^    void setSection(const patch_type& patch, const Obj<section_type>& section) {this->_sheaf[patch] = section;};$/;"	f	class:ALE::Field
setSendOverlap	include/sieve/CartesianSieve.hh	/^    void setSendOverlap(const Obj<send_overlap_type>& overlap) {this->_sendOverlap = overlap;};$/;"	f	class:ALE::CartesianBundle
setSendOverlap	include/sieve/Mesh.hh	/^    void setSendOverlap(const Obj<send_overlap_type>& overlap) {this->_sendOverlap = overlap;};$/;"	f	class:ALE::Bundle
setSendOverlap	include/sieve/Mesh.hh	/^    void setSendOverlap(const Obj<send_overlap_type>& overlap) {this->_sendOverlap = overlap;};$/;"	f	class:ALE::IMesh
setSendOverlap	include/sieve/Topology.hh	/^    void setSendOverlap(const Obj<send_overlap_type>& overlap) {this->_sendOverlap = overlap;};$/;"	f	class:ALE::Topology
setServerLanguages	config/BuildSystem/maker.py	/^  def setServerLanguages(self, serverLanguages):$/;"	m	class:SIDLMake
setSharedLinkerObject	config/BuildSystem/script.py	/^  def setSharedLinkerObject(self, language, linker):$/;"	m	class:LanguageProcessor
setSidl	config/BuildSystem/maker.py	/^  def setSidl(self, sidl):$/;"	m	class:SIDLMake
setSieve	include/sieve/CartesianSieve.hh	/^    void setSieve(const Obj<sieve_type>& sieve) {this->_sieve = sieve;};$/;"	f	class:ALE::CartesianBundle
setSieve	include/sieve/Mesh.hh	/^    void setSieve(const Obj<sieve_type>& sieve) {this->_sieve = sieve;};$/;"	f	class:ALE::Bundle
setSieve	include/sieve/Mesh.hh	/^    void setSieve(const Obj<sieve_type>& sieve) {this->_sieve = sieve;};$/;"	f	class:ALE::IBundle
setSize	include/sieve/ISieve.hh	/^      void setSize(const size_t s) {$/;"	f	class:ALE::ISieveVisitor::PointRetriever
setSkip	include/sieve/ISieve.hh	/^      void setSkip(size_t s) {this->skip = s;};$/;"	f	class:ALE::ISieveVisitor::PointRetriever
setSpaceDimension	include/sieve/FEMProblem.hh	/^      virtual void setSpaceDimension(int dim) {$/;"	f	class:ALE::Problem::GeneralIntegral
setSplicers	config/BuildSystem/setsplicers.py	/^def setSplicers(directory):$/;"	f
setSplicersDir	config/BuildSystem/setsplicers.py	/^def setSplicersDir(splicedimpls,dir,names):$/;"	f
setStaticLinker	config/BuildSystem/config/setCompilers.py	/^  def setStaticLinker(self):$/;"	m	class:Configure
setStorage	include/sieve/Field.hh	/^    void setStorage(value_type *newArray) {$/;"	f	class:ALE::GeneralSection
setStratification	include/sieve/Sieve.hh	/^      void setStratification(bool doStratify) {this->doStratify = doStratify;};$/;"	f	class:ALE::Sieve
setSubkey	include/sieve/LabelSifter.hh	/^        void setSubkey(const subkey_type& subkey) {this->subkey = subkey;};$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
setSubkey	include/sieve/Sifter.hh	/^        void setSubkey(const subkey_type& subkey) {this->subkey = subkey;};$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
setSupport	include/sieve/ISieve.hh	/^    void setSupport(const point_type& p, const point_type support[]) {$/;"	f	class:ALE::IFSieve
setSupportSize	include/sieve/ISieve.hh	/^    void setSupportSize(const point_type& p, const index_type s) {$/;"	f	class:ALE::IFSieve
setSupportSize	include/sieve/LabelSifter.hh	/^    void setSupportSize(source_type p, int s) {}$/;"	f	class:ALE::LabelSifter
setSupportSize	include/sieve/Overlap.hh	/^  void setSupportSize(rank_type rank, index_type size) {$/;"	f	class:PETSc::RecvOverlap
setSupportSize	include/sieve/Sifter.hh	/^    void setSupportSize(const typename traits::source_type& p, int size) {};$/;"	f	class:ALE::ASifter
setTag	include/sieve/Field.hh	/^    void setTag(const int tag) {this->_tag = tag;};$/;"	f	class:ALE::Field
setTemporary	config/BuildSystem/nargs.py	/^  def setTemporary(self, isTemporary):$/;"	m	class:Arg
setTensorRank	include/sieve/FEMProblem.hh	/^      virtual void setTensorRank(int rank) {$/;"	f	class:ALE::Problem::GeneralIntegral
setTitle	config/BuildSystem/help.py	/^  def setTitle(self, title):$/;"	m	class:Info
setTmpDir	config/BuildSystem/config/base.py	/^  def setTmpDir(self, temp):$/;"	m	class:Configure
setTmpDir	config/BuildSystem/config/framework.py	/^  def setTmpDir(self, temp):$/;"	m	class:Framework
setTopology	include/sieve/Field.hh	/^    void setTopology(const Obj<Topology_>& topology) {$/;"	f	class:ALE::Field
setType	config/BuildSystem/RDict.py	/^  def setType(self, key, value, forceLocal = 0):$/;"	m	class:RDict
setUp	bin/pythonscripts/PetscBinaryIO_tests.py	/^    def setUp(self):$/;"	m	class:TestPetscBinaryIO
setUp	config/BuildSystem/config/regression/frameworkTest.py	/^  def setUp(self):$/;"	m	class:FrameworkTest
setUp	config/BuildSystem/config/regression/shellTest.py	/^  def setUp(self):$/;"	m	class:ShellTest
setUp	config/BuildSystem/regression/testCase.py	/^  def setUp(self, baseClass = 'MPIB.Default.Base'):$/;"	m	class:MPITest
setUp	config/BuildSystem/regression/testCase.py	/^  def setUp(self, baseClass = 'PETSc.Base', mpiBaseClass = 'MPIB.Default.Base'):$/;"	m	class:PETScTest
setUp	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^  void setUp(void) {$/;"	f	class:FunctionTestDistribution
setUp	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  void setUp(void) {$/;"	f	class:FunctionTestIDistribution
setUp	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  void setUp(void) {$/;"	f	class:FunctionTestIMesh
setUp	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  void setUp(void) {$/;"	f	class:MemoryTestIMesh
setUp	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  void setUp(void) {$/;"	f	class:StressTestIMesh
setUp	src/dm/impls/mesh/examples/tests/isection1.cxx	/^  void setUp(void) {$/;"	f	class:StressTestIConstantSection
setUp	src/dm/impls/mesh/examples/tests/isection1.cxx	/^  void setUp(void) {$/;"	f	class:StressTestIUniformSection
setUp	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void setUp(void) {$/;"	f	class:FunctionTestISieve
setUp	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void setUp(void) {$/;"	f	class:MemoryTestISieve
setUp	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void setUp(void) {$/;"	f	class:StressTestBigCubeMeshSection
setUp	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void setUp(void) {$/;"	f	class:StressTestBigSquareMeshSection
setUp	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void setUp(void) {$/;"	f	class:StressTestCubeMeshSection
setUp	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void setUp(void) {$/;"	f	class:StressTestCubeMeshSectionNonInterp
setUp	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void setUp(void) {$/;"	f	class:StressTestSquareMeshSection
setUp	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  void setUp(void) {$/;"	f	class:FunctionTestHatSieve
setUp	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  void setUp(void) {$/;"	f	class:StressTestCubeSieve
setUp	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  void setUp(void) {$/;"	f	class:StressTestHatSieve
setUp	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  void setUp(void) {$/;"	f	class:StressTestSquareSieve
setUp	src/dm/impls/mesh/examples/tests/sifter1.cxx	/^  void setUp(void) {$/;"	f	class:StressTestSifter
setUp	src/dm/impls/mesh/examples/tests/stl1.cxx	/^  void setUp(void) {$/;"	f	class:MemoryTestSTL
setUpMPI	config/BuildSystem/regression/testCase.py	/^  def setUpMPI(baseClass):$/;"	m	class:MPITest
setUpMPI	config/BuildSystem/regression/testCase.py	/^  setUpMPI = staticmethod(setUpMPI)$/;"	v	class:MPITest
setUpPETSc	config/BuildSystem/regression/testCase.py	/^  def setUpPETSc(baseClass):$/;"	m	class:PETScTest
setUpPETSc	config/BuildSystem/regression/testCase.py	/^  setUpPETSc = staticmethod(setUpPETSc)$/;"	v	class:PETScTest
setUseSubkey	include/sieve/LabelSifter.hh	/^        void setUseSubkey(const bool& useSubkey) {this->useSubkey = useSubkey;};$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
setUseSubkey	include/sieve/Sifter.hh	/^        void setUseSubkey(const bool& useSubkey) {this->useSubkey = useSubkey;};$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
setValue	config/BuildSystem/nargs.py	/^  def setValue(self, value):$/;"	m	class:Arg
setValue	config/BuildSystem/nargs.py	/^  def setValue(self, value):$/;"	m	class:ArgBool
setValue	config/BuildSystem/nargs.py	/^  def setValue(self, value):$/;"	m	class:ArgDir
setValue	config/BuildSystem/nargs.py	/^  def setValue(self, value):$/;"	m	class:ArgDirList
setValue	config/BuildSystem/nargs.py	/^  def setValue(self, value):$/;"	m	class:ArgDownload
setValue	config/BuildSystem/nargs.py	/^  def setValue(self, value):$/;"	m	class:ArgExecutable
setValue	config/BuildSystem/nargs.py	/^  def setValue(self, value):$/;"	m	class:ArgFuzzyBool
setValue	config/BuildSystem/nargs.py	/^  def setValue(self, value):$/;"	m	class:ArgInt
setValue	config/BuildSystem/nargs.py	/^  def setValue(self, value):$/;"	m	class:ArgLibrary
setValue	config/BuildSystem/nargs.py	/^  def setValue(self, value):$/;"	m	class:ArgReal
setValue	config/BuildSystem/nargs.py	/^  def setValue(self, value):$/;"	m	class:ArgString
setValue	include/sieve/Mesh.hh	/^    void setValue(const Obj<label_type>& label, const point_type& point, const int value) {$/;"	f	class:ALE::Bundle
setValue	include/sieve/Mesh.hh	/^    void setValue(const Obj<label_type>& label, const point_type& point, const int value) {$/;"	f	class:ALE::IBundle
setValue	include/sieve/Topology.hh	/^    void setValue(const Obj<patch_label_type>& label, const point_type& point, const int value) {$/;"	f	class:ALE::Topology
setVerbosity	src/dm/impls/mesh/ALE.cxx	/^  void setVerbosity(const int& verbosity) {ALE::verbosity = verbosity;};$/;"	f	namespace:ALE
setWebDirectory	config/BuildSystem/project.py	/^  def setWebDirectory(self,webdirectory):$/;"	m	class:Project
set_field_info	include/web/AMS.py	/^    def set_field_info(self,field,value,funct = null):$/;"	m	class:AMS_Memory
set_intersection_merge	include/sieve/ParallelMapping.hh	/^    static _OutputIterator set_intersection_merge(_InputIterator1 __first1, _InputIterator1 __last1,$/;"	f	class:ALE::OverlapBuilder
set_type	include/sieve/LabelSifter.hh	/^      > set_type;$/;"	t	struct:ALE::NewSifterDef::ArrowContainer
set_type	include/sieve/Sieve.hh	/^      > set_type;$/;"	t	struct:ALE::SieveDef::RecContainerTraits
set_type	include/sieve/Sieve.hh	/^      typedef typename traits::set_type set_type;$/;"	t	struct:ALE::SieveDef::RecContainer
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setfromoptions	include/petsc-private/linesearchimpl.h	/^  PetscErrorCode (*setfromoptions)(SNESLineSearch);$/;"	m	struct:_LineSearchOps
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setfromoptions	include/petsc-private/matimpl.h	/^  PetscErrorCode (*setfromoptions)(MatCoarsen);$/;"	m	struct:_MatCoarsenOps
setfromoptions	include/petsc-private/matimpl.h	/^  PetscErrorCode (*setfromoptions)(MatPartitioning);$/;"	m	struct:_MatPartitioningOps
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setfromoptions	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*setfromoptions)(TSAdapt);$/;"	m	struct:_TSAdaptOps
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setfromoptions	include/petsc-private/viewerimpl.h	/^   PetscErrorCode (*setfromoptions)(PetscViewer);$/;"	m	struct:_PetscViewerOps
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setupHelp	config/BuildSystem/config/sourceControl.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/BuildSystem/config/types.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/BuildSystem/maker.py	/^  def setupHelp(self, help):$/;"	m	class:BasicMake
setupHelp	config/BuildSystem/maker.py	/^  def setupHelp(self, help):$/;"	m	class:Make
setupHelp	config/BuildSystem/maker.py	/^  def setupHelp(self, help):$/;"	m	class:SIDLMake
setupHelp	config/BuildSystem/regression/buildtest.py	/^  def setupHelp(self):$/;"	m	class:RemoteBuild
setupHelp	config/BuildSystem/script.py	/^  def setupHelp(self, help):$/;"	m	class:Script
setupHelp	config/PETSc/Configure.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/packages/MUMPS.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/packages/Matlab.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/packages/Sieve.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/packages/cmake.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/packages/cuda.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/packages/sowing.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/petsc.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/utilities/CHUD.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/utilities/Etags.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/utilities/FPTrap.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/utilities/Regression.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/utilities/arch.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/utilities/bmakeDir.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/utilities/cacheDetails.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/utilities/dataFilesPath.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/utilities/debuggers.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/utilities/debugging.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/utilities/fortranCPP.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/utilities/fortranCommandLine.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/utilities/getResidentSetSize.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/utilities/languages.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/utilities/libraryOptions.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/utilities/memAlign.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/utilities/missing.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/utilities/petscdir.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/utilities/scalarTypes.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/utilities/sharedLibraries.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/PETSc/utilities/timer.py	/^  def setupHelp(self, help):$/;"	m	class:Configure
setupHelp	config/builder.py	/^ def setupHelp(self, help):$/;"	m	class:PETScMaker
setupHelp	config/install.py	/^  def setupHelp(self, help):$/;"	m	class:Installer
setupHelp	src/dm/impls/mesh/examples/tests/memoryTests.py	/^  def setupHelp(self, help):$/;"	m	class:MemoryTests
setupHelp	src/dm/impls/mesh/examples/tests/sieveTests.py	/^  def setupHelp(self, help):$/;"	m	class:SieveTests
setupIOR	config/BuildSystem/maker.py	/^  def setupIOR(self, builder, sidlFile, language):$/;"	m	class:SIDLMake
setupIncludeDirectories	config/BuildSystem/build/templates/usingCxx.py	/^  def setupIncludeDirectories(self):$/;"	m	class:UsingCxx
setupIncludeDirectories	config/BuildSystem/build/templates/usingPython.py	/^  def setupIncludeDirectories(self):$/;"	m	class:UsingPython
setupLibraries	config/BuildSystem/maker.py	/^  def setupLibraries(self, builder):$/;"	m	class:BasicMake
setupLibraryDirectories	config/BuildSystem/maker.py	/^  def setupLibraryDirectories(self, builder):$/;"	m	class:BasicMake
setupLogFile	config/BuildSystem/RDict.py	/^  def setupLogFile(self, filename = 'RDict.log'):$/;"	m	class:RDict
setupModules	config/builder.py	/^  def setupModules(self):$/;"	m	class:PETScConfigureInfo
setupModules	config/cmakeboot.py	/^ def setupModules(self):$/;"	m	class:PETScMaker
setupModules	config/install.py	/^  def setupModules(self):$/;"	m	class:Installer
setupPackageDependencies	config/BuildSystem/config/base.py	/^  def setupPackageDependencies(self, framework):$/;"	m	class:Configure
setupPackageDependencies	config/BuildSystem/config/packages/PETSc.py	/^  def setupPackageDependencies(self, framework):$/;"	m	class:Configure
setupPackageDependencies	config/PETSc/petsc.py	/^  def setupPackageDependencies(self, framework):$/;"	m	class:Configure
setupPaths	config/PETSc/FEM.py	/^  def setupPaths(self):$/;"	m	class:QuadratureGenerator
setupProject	config/BuildSystem/build/framework.py	/^  def setupProject(self):$/;"	m	class:Framework
setupPythonClient	config/BuildSystem/maker.py	/^  def setupPythonClient(self, builder, sidlFile, language):$/;"	m	class:SIDLMake
setupPythonServer	config/BuildSystem/maker.py	/^  def setupPythonServer(self, builder, sidlFile, language):$/;"	m	class:SIDLMake
setupPythonSkeleton	config/BuildSystem/maker.py	/^  def setupPythonSkeleton(self, builder, sidlFile, language):$/;"	m	class:SIDLMake
setupReceive	include/sieve/SectionCompletion.hh	/^      static void setupReceive(const Obj<RecvOverlap>& recvOverlap, const Obj<Sizer>& recvSizer, const Obj<Section>& recvSection) {$/;"	f	class:ALE::New::SectionCompletion
setupSIDL	config/BuildSystem/maker.py	/^  def setupSIDL(self, builder, sidlFile):$/;"	m	class:SIDLMake
setupSection	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^  void setupSection(const char filename[], const int numCells, real_section_type& section) {$/;"	f	class:FunctionTestDistribution
setupSection	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  void setupSection(const char filename[], const int numCells, mesh_type::renumbering_type& renumbering, real_section_type& section) {$/;"	f	class:FunctionTestIDistribution
setupSend	include/sieve/SectionCompletion.hh	/^      static void setupSend(const Obj<topology_type>& sendChart, const Obj<Sizer>& sendSizer, const Obj<Section>& sendSection) {$/;"	f	class:ALE::New::SectionCompletion
setupSourceDB	config/BuildSystem/build/framework.py	/^  def setupSourceDB(self, proj):$/;"	m	class:Framework
setupUrlMapping	config/BuildSystem/urlMappingInstalled.py	/^def setupUrlMapping(self, urlMaps):$/;"	f
setupUrlMapping	config/BuildSystem/urlMappingLocal.py	/^def setupUrlMapping(self, urlMaps):$/;"	f
setupcalled	include/petsc-private/characteristicimpl.h	/^  PetscInt     setupcalled;$/;"	m	struct:_p_Characteristic
setupcalled	include/petsc-private/dmimpl.h	/^  PetscBool               setupcalled;        \/* Indicates that the DM has been set up, methods that modify a DM such that a fresh setup is required should reset this flag *\/$/;"	m	struct:_p_DM
setupcalled	include/petsc-private/linesearchimpl.h	/^  PetscBool           setupcalled;$/;"	m	struct:_p_LineSearch
setupcalled	include/petsc-private/matimpl.h	/^  PetscInt    setupcalled;$/;"	m	struct:_p_MatCoarsen
setupcalled	include/petsc-private/matimpl.h	/^  PetscInt    setupcalled;$/;"	m	struct:_p_MatPartitioning
setupcalled	include/petsc-private/pcimpl.h	/^  PetscInt       setupcalled;$/;"	m	struct:_p_PC
setupcalled	include/petsc-private/sfimpl.h	/^  PetscBool       setupcalled;  \/* Type and communication structures have been set up *\/$/;"	m	struct:_p_PetscSF
setupcalled	include/petsc-private/snesimpl.h	/^  PetscBool      setupcalled;                \/* true if setup has been called *\/$/;"	m	struct:_p_SNES
setupcalled	include/petsc-private/tsimpl.h	/^  PetscInt setupcalled;             \/* true if setup has been called *\/$/;"	m	struct:_p_TS
setuponblocks	include/petsc-private/pcimpl.h	/^  PetscErrorCode (*setuponblocks)(PC);$/;"	m	struct:_PCOps
setupstage	include/petsc-private/kspimpl.h	/^  KSPSetUpStage  setupstage;$/;"	m	struct:_p_KSP
setvalues	include/petsc-private/matimpl.h	/^  PetscErrorCode (*setvalues)(Mat,PetscInt,const PetscInt[],PetscInt,const PetscInt[],const PetscScalar[],InsertMode);$/;"	m	struct:_MatOps
setvalues	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*setvalues)(Vec,PetscInt,const PetscInt[],const PetscScalar[],InsertMode);$/;"	m	struct:_VecOps
setvaluesadifor	include/petsc-private/matimpl.h	/^  PetscErrorCode (*setvaluesadifor)(Mat,PetscInt,void*);$/;"	m	struct:_MatOps
setvaluesbatch	include/petsc-private/matimpl.h	/^  PetscErrorCode (*setvaluesbatch)(Mat,PetscInt,PetscInt,PetscInt*,const PetscScalar*);$/;"	m	struct:_MatOps
setvaluesblocked	include/petsc-private/matimpl.h	/^  PetscErrorCode (*setvaluesblocked)(Mat,PetscInt,const PetscInt[],PetscInt,const PetscInt[],const PetscScalar[],InsertMode);$/;"	m	struct:_MatOps
setvaluesblocked	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*setvaluesblocked)(Vec,PetscInt,const PetscInt[],const PetscScalar[],InsertMode);$/;"	m	struct:_VecOps
setvaluesblockedlocal	include/petsc-private/matimpl.h	/^  PetscErrorCode (*setvaluesblockedlocal)(Mat,PetscInt,const PetscInt[],PetscInt,const PetscInt[],const PetscScalar[],InsertMode);$/;"	m	struct:_MatOps
setvalueslocal	include/petsc-private/matimpl.h	/^  PetscErrorCode (*setvalueslocal)(Mat,PetscInt,const PetscInt[],PetscInt,const PetscInt[],const PetscScalar[],InsertMode);$/;"	m	struct:_MatOps
setvalueslocal	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*setvalueslocal)(Vec,PetscInt,const PetscInt *,const PetscScalar *,InsertMode);$/;"	m	struct:_VecOps
setvaluesrow	include/petsc-private/matimpl.h	/^  PetscErrorCode (*setvaluesrow)(Mat,PetscInt,const PetscScalar[]);$/;"	m	struct:_MatOps
setviewport	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*setviewport)(PetscDraw,PetscReal,PetscReal,PetscReal,PetscReal);$/;"	m	struct:_PetscDrawOps
sf	include/petsc-private/dmimpl.h	/^  PetscSF                 sf;                   \/* SF for parallel point overlap *\/$/;"	m	struct:_p_DM
sf	include/petsc-private/meshimpl.h	/^  PetscSF              sf;  \/* SF for parallel point overlap *\/$/;"	m	struct:__anon16
sharedStorage	include/sieve/Field.hh	/^    bool sharedStorage() const {return this->_sharedStorage;};$/;"	f	class:ALE::GeneralSection
sheaf_type	include/sieve/Field.hh	/^    typedef std::map<patch_type, Obj<section_type> > sheaf_type;$/;"	t	class:ALE::Field
sheaf_type	include/sieve/Topology.hh	/^    typedef typename std::map<patch_type, Obj<sieve_type>, std::less<patch_type>, pair1_alloc_type>           sheaf_type;$/;"	t	class:ALE::Topology
shift	include/petsc-private/matimpl.h	/^  PetscErrorCode (*shift)(Mat,PetscScalar);$/;"	m	struct:_MatOps
shift	include/petsc-private/tsimpl.h	/^    PetscReal shift;            \/* The derivative of the lhs wrt to Xdot *\/$/;"	m	struct:_p_TS::__anon7
shift	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*shift)(Vec);$/;"	m	struct:_VecOps
shift_amount	include/petsc-private/matimpl.h	/^  PetscReal      shift_amount,shift_lo,shift_hi,shift_top,shift_fraction;$/;"	m	struct:__anon4
shift_fraction	include/petsc-private/matimpl.h	/^  PetscReal      shift_amount,shift_lo,shift_hi,shift_top,shift_fraction;$/;"	m	struct:__anon4
shift_hi	include/petsc-private/matimpl.h	/^  PetscReal      shift_amount,shift_lo,shift_hi,shift_top,shift_fraction;$/;"	m	struct:__anon4
shift_lo	include/petsc-private/matimpl.h	/^  PetscReal      shift_amount,shift_lo,shift_hi,shift_top,shift_fraction;$/;"	m	struct:__anon4
shift_top	include/petsc-private/matimpl.h	/^  PetscReal      shift_amount,shift_lo,shift_hi,shift_top,shift_fraction;$/;"	m	struct:__anon4
shiftamount	include/petscmat.h	/^  PetscReal     shiftamount;     \/* how large the shift is *\/$/;"	m	struct:__anon96
shifttype	include/petscmat.h	/^  PetscReal     shifttype;      \/* type of shift added to matrix factor to prevent zero pivots *\/$/;"	m	struct:__anon96
shlex	config/PETSc/packages/clique.py	/^    import shlex$/;"	i
shlex	config/PETSc/packages/elemental.py	/^    import shlex$/;"	i
shlex	config/PETSc/packages/metis.py	/^    import shlex$/;"	i
shlex	config/PETSc/packages/parmetis.py	/^    import shlex$/;"	i
shlex	config/cmakeboot.py	/^   import shlex$/;"	i
shouldConfigure	config/BuildSystem/maker.py	/^  def shouldConfigure(self, builder, framework):$/;"	m	class:Make
show	config/builder2.py	/^def show(args):$/;"	f
show	include/sieve/ALE_mem.hh	/^    void show() {$/;"	f	class:ALE::MemoryLogger
showSingleRun	config/builder2.py	/^def showSingleRun(maker, ex, extraArgs = ''):$/;"	f
shutdown	config/BuildSystem/RDict.py	/^  def shutdown(self):$/;"	m	class:RDict
shutdownDelay	config/BuildSystem/RDict.py	/^  shutdownDelay = 60*60*5$/;"	v	class:RDict
shutil	config/BuildSystem/build/framework.py	/^    import shutil$/;"	i
shutil	config/BuildSystem/config/base.py	/^        import shutil$/;"	i
shutil	config/BuildSystem/config/compilers.py	/^import shutil$/;"	i
shutil	config/BuildSystem/config/framework.py	/^        import shutil$/;"	i
shutil	config/BuildSystem/config/framework.py	/^      import shutil$/;"	i
shutil	config/BuildSystem/config/packages/boost.py	/^    import shutil$/;"	i
shutil	config/BuildSystem/config/packages/cusp.py	/^    import shutil$/;"	i
shutil	config/BuildSystem/config/packages/exodusii.py	/^    import shutil$/;"	i
shutil	config/BuildSystem/config/packages/fiat.py	/^    import shutil$/;"	i
shutil	config/BuildSystem/config/packages/scientificpython.py	/^    import shutil$/;"	i
shutil	config/BuildSystem/config/packages/thrust.py	/^    import shutil$/;"	i
shutil	config/BuildSystem/maker.py	/^    import shutil$/;"	i
shutil	config/BuildSystem/patch.py	/^          import shutil$/;"	i
shutil	config/BuildSystem/retrieval.py	/^          import shutil$/;"	i
shutil	config/PETSc/packages/clique.py	/^        import shutil$/;"	i
shutil	config/PETSc/packages/elemental.py	/^        import shutil$/;"	i
shutil	config/PETSc/packages/metis.py	/^        import shutil$/;"	i
shutil	config/PETSc/packages/parmetis.py	/^        import shutil$/;"	i
shutil	config/PETSc/packages/txpetscgpu.py	/^    import shutil$/;"	i
shutil	config/builder.py	/^import shutil$/;"	i
shutil	config/builder2.py	/^  import shutil$/;"	i
shutil	config/cmakeboot.py	/^   import shutil$/;"	i
shutil	config/cmakegen.py	/^  import tempfile, shutil$/;"	i
shutil	config/configure.py	/^    import shutil$/;"	i
shutil	config/install.py	/^    import shutil$/;"	i
shutil	config/install.py	/^import re, os, sys, shutil$/;"	i
sidl	config/BuildSystem/maker.py	/^  sidl = property(getSidl, setSidl, doc = 'The list of input SIDL files')$/;"	v	class:SIDLMake
sidlTemplate	config/BuildSystem/build/framework.py	/^  sidlTemplate = property(getSIDLTemplate, doc = 'This is the default template for SIDL operations')$/;"	v	class:Framework
sieve	include/sieve/ISieve.hh	/^      const Sieve& sieve;$/;"	m	class:ALE::ISieveVisitor::ConeVisitor
sieve	include/sieve/ISieve.hh	/^      const Sieve& sieve;$/;"	m	class:ALE::ISieveVisitor::NConeRetriever
sieve	include/sieve/ISieve.hh	/^      const Sieve& sieve;$/;"	m	class:ALE::ISieveVisitor::OrientedConeVisitor
sieve	include/sieve/ISieve.hh	/^      const Sieve& sieve;$/;"	m	class:ALE::ISieveVisitor::SupportVisitor
sieve	include/sieve/ISieve.hh	/^      const Sieve& sieve;$/;"	m	class:ALE::ISieveVisitor::TransitiveClosureVisitor
sieve	include/sieve/Mesh.hh	/^      const sieve_type& sieve;$/;"	m	class:ALE::IBundle::DepthVisitor
sieve	include/sieve/Mesh.hh	/^      const sieve_type& sieve;$/;"	m	class:ALE::IBundle::HeightVisitor
sieve	include/sieve/Partitioner.hh	/^      const Sieve& sieve;$/;"	m	class:ALE::Partitioner::MeetVisitor
sieve	include/sieve/Partitioner.hh	/^      const Sieve& sieve;$/;"	m	class:ALE::Partitioner::OffsetVisitor
sieve	include/sieve/Selection.hh	/^      const Obj<sieve_type> sieve;$/;"	m	class:ALE::Selection::FaceInserter
sieve	include/sieve/Selection.hh	/^      const Obj<sieve_type>& sieve;$/;"	m	class:ALE::Selection::FaceInserterV
sieve	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^  PetscBool  sieve;       \/\/ Run the Sieve tests$/;"	m	struct:__anon5	file:
sieve	src/dm/impls/mesh/examples/tests/unitTests.cxx	/^  PetscBool  sieve;         \/\/ Run the Sieve tests$/;"	m	struct:__anon23	file:
sieveAlg	include/sieve/Selection.hh	/^    typedef typename ALE::SieveAlg<mesh_type>    sieveAlg;$/;"	t	class:ALE::Selection
sieveAlgM_type	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^typedef ALE::SieveAlg<mesh_type>         sieveAlgM_type;$/;"	t	file:
sieveAlg_type	src/dm/impls/mesh/examples/tests/section1.cxx	/^typedef ALE::SieveAlg<mesh_type>     sieveAlg_type;$/;"	t	file:
sieveAlg_type	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^typedef ALE::SieveAlg<bundle_type>       sieveAlg_type;$/;"	t	file:
sieveCompletion	include/sieve/Distribution.hh	/^    typedef typename ALE::New::Completion<bundle_type, typename sieve_type::point_type>                            sieveCompletion;$/;"	t	class:ALE::Distribution
sieveCompletion	src/dm/impls/mesh/examples/tests/sieve2-old.cxx	/^typedef ALE::New::Completion<topology_type, sieve_type::point_type>              sieveCompletion;$/;"	t	file:
sieve_alg_type	include/sieve/Mesh.hh	/^    typedef typename ALE::SieveAlg<this_type>                         sieve_alg_type;$/;"	t	class:ALE::Bundle
sieve_alg_type	include/sieve/Mesh.hh	/^    typedef typename ALE::SieveAlg<this_type>                         sieve_alg_type;$/;"	t	class:ALE::IBundle
sieve_alg_type	include/sieve/Mesh.hh	/^    typedef typename base_type::sieve_alg_type        sieve_alg_type;$/;"	t	class:ALE::Mesh
sieve_type	include/petscdmmesh_formats.hh	/^      typedef Mesh::sieve_type        sieve_type;$/;"	t	class:ALE::PCICE::Builder
sieve_type	include/petscdmmesh_formats.hh	/^      typedef Mesh::sieve_type        sieve_type;$/;"	t	class:ALE::PFLOTRAN::Builder
sieve_type	include/petscdmmesh_formats.hh	/^      typedef Mesh::sieve_type        sieve_type;$/;"	t	class:ALE::PyLith::Builder
sieve_type	include/petscdmmesh_formats.hh	/^      typedef PETSC_MESH_TYPE::sieve_type sieve_type;$/;"	t	class:ALE::Bardhan::Builder
sieve_type	include/petscdmmesh_formats.hh	/^      typedef PETSC_MESH_TYPE::sieve_type sieve_type;$/;"	t	class:ALE::LaGriT::Builder
sieve_type	include/sieve/CartesianSieve.hh	/^    typedef CartesianBundle::sieve_type        sieve_type;$/;"	t	class:ALE::CartesianMesh
sieve_type	include/sieve/CartesianSieve.hh	/^    typedef CartesianSieve<int>                                       sieve_type;$/;"	t	class:ALE::CartesianBundle
sieve_type	include/sieve/Completion.hh	/^      typedef typename bundle_type::sieve_type                                            sieve_type;$/;"	t	class:ALE::New::Completion
sieve_type	include/sieve/Distribution.hh	/^    typedef typename bundle_type::sieve_type                                            sieve_type;$/;"	t	class:ALE::Distribution
sieve_type	include/sieve/Mesh.hh	/^    typedef Sieve_                                                    sieve_type;$/;"	t	class:ALE::Bundle
sieve_type	include/sieve/Mesh.hh	/^    typedef Sieve_                                                    sieve_type;$/;"	t	class:ALE::IBundle
sieve_type	include/sieve/Mesh.hh	/^    typedef typename base_type::sieve_type            sieve_type;$/;"	t	class:ALE::IMesh
sieve_type	include/sieve/Mesh.hh	/^    typedef typename base_type::sieve_type            sieve_type;$/;"	t	class:ALE::Mesh
sieve_type	include/sieve/Numbering.hh	/^    typedef typename bundle_type::sieve_type                sieve_type;$/;"	t	class:ALE::NumberingFactory
sieve_type	include/sieve/Partitioner.hh	/^        typedef typename bundle_type::sieve_type sieve_type;$/;"	t	class:ALE::New::Chaco::Partitioner
sieve_type	include/sieve/Partitioner.hh	/^        typedef typename bundle_type::sieve_type sieve_type;$/;"	t	class:ALE::New::ParMetis::Partitioner
sieve_type	include/sieve/Partitioner.hh	/^        typedef typename bundle_type::sieve_type sieve_type;$/;"	t	class:ALE::New::Zoltan::Partitioner
sieve_type	include/sieve/Partitioner.hh	/^      typedef typename bundle_type::sieve_type sieve_type;$/;"	t	class:ALE::New::Partitioner
sieve_type	include/sieve/SectionCompletion.hh	/^      typedef typename mesh_topology_type::sieve_type                                          sieve_type;$/;"	t	class:ALE::New::SectionCompletion
sieve_type	include/sieve/Sections.hh	/^      typedef Sieve_                            sieve_type;$/;"	t	class:ALE::New::ArrowSection
sieve_type	include/sieve/Sections.hh	/^      typedef Sieve_                           sieve_type;$/;"	t	class:ALE::New::ConeSection
sieve_type	include/sieve/Sections.hh	/^      typedef Sieve_                           sieve_type;$/;"	t	class:ALE::New::ConeSizeSection
sieve_type	include/sieve/Sections.hh	/^      typedef Sieve_                           sieve_type;$/;"	t	class:ALE::New::SupportSection
sieve_type	include/sieve/Sections.hh	/^      typedef Sieve_                           sieve_type;$/;"	t	class:ALE::New::SupportSizeSection
sieve_type	include/sieve/Sections.hh	/^      typedef typename bundle_type::sieve_type   sieve_type;$/;"	t	class:ALE::New::PartitionSection
sieve_type	include/sieve/Sections.hh	/^      typedef typename bundle_type::sieve_type sieve_type;$/;"	t	class:ALE::New::PartitionSizeSection
sieve_type	include/sieve/Sections.hh	/^    typedef Sieve_                                    sieve_type;$/;"	t	class:ALE::BaseSection
sieve_type	include/sieve/Sections.hh	/^    typedef Sieve_                                    sieve_type;$/;"	t	class:ALE::BaseSectionV
sieve_type	include/sieve/Sections.hh	/^    typedef Sieve_                                    sieve_type;$/;"	t	class:ALE::LabelBaseSection
sieve_type	include/sieve/Sections.hh	/^    typedef Sieve_                                    sieve_type;$/;"	t	class:ALE::LabelBaseSectionV
sieve_type	include/sieve/Sections.hh	/^    typedef Sieve_                                   sieve_type;$/;"	t	class:ALE::ConeSectionV
sieve_type	include/sieve/Sections.hh	/^    typedef Sieve_                                   sieve_type;$/;"	t	class:ALE::OrientedConeSectionV
sieve_type	include/sieve/Sections.hh	/^    typedef Sieve_                                  sieve_type;$/;"	t	class:ALE::ConeSection
sieve_type	include/sieve/Sections.hh	/^    typedef Sieve_                               sieve_type;$/;"	t	class:ALE::ConeSizeSectionV
sieve_type	include/sieve/Sections.hh	/^    typedef Sieve_                              sieve_type;$/;"	t	class:ALE::ConeSizeSection
sieve_type	include/sieve/Sections.hh	/^    typedef Sieve_                              sieve_type;$/;"	t	class:ALE::LabelSection
sieve_type	include/sieve/Selection.hh	/^    typedef typename mesh_type::sieve_type       sieve_type;$/;"	t	class:ALE::Selection
sieve_type	include/sieve/SieveAlgorithms.hh	/^    typedef typename bundle_type::sieve_type         sieve_type;$/;"	t	class:ALE::SieveAlg
sieve_type	include/sieve/SieveBuilder.hh	/^    typedef typename bundle_type::sieve_type             sieve_type;$/;"	t	class:ALE::SieveBuilder
sieve_type	include/sieve/Topology.hh	/^    typedef Sieve_                                                sieve_type;$/;"	t	class:ALE::Topology
sieve_type	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^  typedef mesh_type::sieve_type        sieve_type;$/;"	t	class:FunctionTestDistribution	file:
sieve_type	src/dm/impls/mesh/examples/tests/ex01.c	/^typedef ALE::Three::Sieve<ALE::def::Point,int,int> sieve_type;$/;"	t	file:
sieve_type	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  typedef mesh_type::sieve_type        sieve_type;$/;"	t	class:FunctionTestIDistribution	file:
sieve_type	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  typedef mesh_type::sieve_type sieve_type;$/;"	t	class:MemoryTestIMesh	file:
sieve_type	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  typedef mesh_type::sieve_type sieve_type;$/;"	t	class:StressTestIMesh	file:
sieve_type	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  typedef ALE::IFSieve<int> sieve_type;$/;"	t	class:FunctionTestISieve	file:
sieve_type	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  typedef ALE::IFSieve<int> sieve_type;$/;"	t	class:MemoryTestISieve	file:
sieve_type	src/dm/impls/mesh/examples/tests/mesh1.cxx	/^typedef ALE::Mesh::sieve_type        sieve_type;$/;"	t	file:
sieve_type	src/dm/impls/mesh/examples/tests/overlap2.cxx	/^typedef ALE::Test::OverlapTest::sieve_type        sieve_type;$/;"	t	file:
sieve_type	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^      typedef ALE::Sieve<point_type, int, int>                                      sieve_type;$/;"	t	class:ALE::Test::OverlapTest
sieve_type	src/dm/impls/mesh/examples/tests/section1-old.cxx	/^typedef topology_type::sieve_type        sieve_type;$/;"	t	file:
sieve_type	src/dm/impls/mesh/examples/tests/section1.cxx	/^typedef ALE::Mesh::sieve_type        sieve_type;$/;"	t	file:
sieve_type	src/dm/impls/mesh/examples/tests/sectionTest.hh	/^    typedef ALE::Sieve<int, int, int>                sieve_type;$/;"	t	namespace:ALE::Test
sieve_type	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^typedef ALE::Sieve<point_type, int, int> sieve_type;$/;"	t	file:
sieve_type	src/dm/impls/mesh/examples/tests/sieve2-old.cxx	/^typedef topology_type::sieve_type                                 sieve_type;$/;"	t	file:
sieve_type	src/dm/impls/mesh/examples/tests/sieveTest.hh	/^      typedef typename topology_type::sieve_type sieve_type;$/;"	t	class:ALE::Test::TopologyBuilder
sieve_type	src/dm/impls/mesh/examples/tests/topology1.cxx	/^typedef topology_type::sieve_type sieve_type;$/;"	t	file:
sieve_type	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^typedef ALE::Mesh::sieve_type                           sieve_type;$/;"	t	namespace:ALE::Hierarchy
sifter	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^  PetscBool  sifter;      \/\/ Run the Sifter tests$/;"	m	struct:__anon5	file:
sifter	src/dm/impls/mesh/examples/tests/unitTests.cxx	/^  PetscBool  sifter;        \/\/ Run the Sifter tests$/;"	m	struct:__anon23	file:
sifter_type	src/dm/impls/mesh/examples/tests/sifter1.cxx	/^typedef ALE::Sifter<point_type, point_type, int> sifter_type;$/;"	t	file:
signal	config/BuildSystem/RDict.py	/^        import signal$/;"	i
simpleCellNumbering	include/sieve/Partitioner.hh	/^      bool             simpleCellNumbering;$/;"	m	class:ALE::Partitioner::MeshManager
sindices	include/petsc-private/matimpl.h	/^  PetscInt      *sindices;$/;"	m	struct:__anon1
sindices	include/petsc-private/vecimpl.h	/^  PetscInt      *sindices,*rindices;$/;"	m	struct:__anon24
singleton	include/sieve/ALE_containers.hh	/^    singleton(const X& x)         : first(x) {};$/;"	f	struct:ALE::singleton
singleton	include/sieve/ALE_containers.hh	/^    singleton(const singleton& s) : first(s.first) {};$/;"	f	struct:ALE::singleton
singleton	include/sieve/ALE_containers.hh	/^  struct singleton {$/;"	s	namespace:ALE
singleton	include/sieve/ALE_mem.hh	/^    static MemoryLogger& singleton() {$/;"	f	class:ALE::MemoryLogger
singleton	include/sieve/Completion.hh	/^      static const Obj<ParallelFactory>& singleton(const int debug, bool cleanup = false) {$/;"	f	class:ALE::New::ParallelFactory
singleton	include/sieve/INumbering.hh	/^    static const INumberingFactory& singleton(MPI_Comm comm, const int debug, bool cleanup = false) {$/;"	f	class:ALE::INumberingFactory
singleton	include/sieve/Numbering.hh	/^    static const Obj<NumberingFactory>& singleton(MPI_Comm comm, const int debug, bool cleanup = false) {$/;"	f	class:ALE::NumberingFactory
singleton	include/sieve/ParallelMapping.hh	/^    static PointFactory& singleton(MPI_Comm comm, const point_type& maxPoint, const int debug = 0, bool cleanup = false) {$/;"	f	class:ALE::PointFactory
size	include/petsc-private/matimpl.h	/^  PetscMPIInt   size,rank;$/;"	m	struct:__anon1
size	include/petsc-private/vecimpl.h	/^  PetscMPIInt   size,rank;$/;"	m	struct:__anon24
size	include/petscmat.h	/^  PetscInt     size;$/;"	m	struct:_PetscCoarsenData
size	include/petscsys.hh	/^    inline int size() const {return dim;};$/;"	f	struct:PETSc::Point
size	include/sieve/ALE_containers.hh	/^    virtual typename index_type::size_type  size()  {$/;"	f	struct:ALE::IndexSequence
size	include/sieve/CartesianSieve.hh	/^    int size(const Obj<Section_>& section, const point_type& p) {$/;"	f	class:ALE::CartesianMesh
size	include/sieve/FEMProblem.hh	/^      virtual int size() {$/;"	f	class:ALE::Problem::GeneralDiscretization
size	include/sieve/Field.hh	/^    int size() const {$/;"	f	class:ALE::FEMSection
size	include/sieve/Field.hh	/^    int size() const {$/;"	f	class:ALE::GeneralSection
size	include/sieve/Field.hh	/^    int size() const {$/;"	f	class:ALE::Section
size	include/sieve/Field.hh	/^    int size() const {$/;"	f	class:ALE::UniformSection
size	include/sieve/Field.hh	/^    int size() {$/;"	f	class:ALE::NewUniformSection
size	include/sieve/Field.hh	/^    int size(const int space) const {$/;"	f	class:ALE::GeneralSection
size	include/sieve/Field.hh	/^    int size(const point_type& p) {return this->getFiberDimension(p);}$/;"	f	class:ALE::FauxConstantSection
size	include/sieve/Field.hh	/^    int size(const point_type& p) {return this->getFiberDimension(p);};$/;"	f	class:ALE::ConstantSection
size	include/sieve/Field.hh	/^    size_type      size()  const {return this->_map.size();};$/;"	f	class:ALE::SetFromMap
size	include/sieve/IField.hh	/^    int size() const {return this->_atlas->getChart().size()*fiberDim;};$/;"	f	class:ALE::IUniformSection
size	include/sieve/IField.hh	/^    int size(const point_type& p) {return this->getFiberDimension(p);}$/;"	f	class:ALE::IConstantSection
size	include/sieve/ISieve.hh	/^      const size_t size;$/;"	m	class:ALE::ISieveVisitor::FilteredPointRetriever
size	include/sieve/ISieve.hh	/^      int                 size;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
size	include/sieve/ISieve.hh	/^      int                size;$/;"	m	class:ALE::ISieveVisitor::RestrictVecVisitor
size	include/sieve/ISieve.hh	/^      int            size;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
size	include/sieve/ISieve.hh	/^      int            size;$/;"	m	class:ALE::ISieveVisitor::RestrictVisitor
size	include/sieve/ISieve.hh	/^      int            size;$/;"	m	class:ALE::ISieveVisitor::SizeVisitor
size	include/sieve/ISieve.hh	/^      int            size;$/;"	m	class:ALE::ISieveVisitor::SizeWithBCVisitor
size	include/sieve/ISieve.hh	/^      int          size;$/;"	m	class:ALE::ISieveVisitor::SizeWithBCVisitor
size	include/sieve/ISieve.hh	/^      size_t               size;$/;"	m	class:ALE::ISieveVisitor::PointRetriever
size	include/sieve/ISieve.hh	/^      size_t size() const {return(_end - _begin);}$/;"	f	class:ALE::IFSieveDef::Sequence
size	include/sieve/ISieve.hh	/^    size_t size() const {return this->_max - this->_min;};$/;"	f	class:ALE::Interval
size	include/sieve/LabelSifter.hh	/^        virtual typename traits::index_type::size_type  size()  {$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
size	include/sieve/LabelSifter.hh	/^    int size() const {return _arrows.set.size();};$/;"	f	class:ALE::LabelSifter
size	include/sieve/Mesh.hh	/^    int size(const Obj<Bundle>& mesh) {$/;"	f	class:ALE::Discretization
size	include/sieve/Mesh.hh	/^    int size(const Obj<Section>& section, const point_type& p) {$/;"	f	class:ALE::IMesh
size	include/sieve/Mesh.hh	/^    int size(const Obj<Section_>& section, const point_type& p) {$/;"	f	class:ALE::Bundle
size	include/sieve/Sections.hh	/^    int size() {$/;"	f	class:ALE::OrientedConeSectionV
size	include/sieve/Sieve.hh	/^       virtual typename traits::index_type::size_type size() {$/;"	f	class:ALE::SieveDef::RecContainerTraits::TwoValueSequence
size	include/sieve/Sieve.hh	/^       virtual typename traits::index_type::size_type size() {return this->_index.count(this->_value);};$/;"	f	class:ALE::SieveDef::RecContainerTraits::ValueSequence
size	include/sieve/Sieve.hh	/^       virtual typename traits::index_type::size_type size() {return this->_index.size();};$/;"	f	class:ALE::SieveDef::RecContainerTraits::PointSequence
size	include/sieve/Sifter.hh	/^        virtual typename traits::index_type::size_type  size()  {$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
size	include/sieve/Sifter.hh	/^       virtual typename traits::index_type::size_type size() {return this->_index.size();};$/;"	f	class:ALE::SifterDef::RecContainerTraits::PointSequence
size	include/sieve/UFCProblem.hh	/^      int size() {$/;"	f	class:ALE::Problem::UFCDiscretization
size	src/dm/impls/mesh/examples/tests/distributionTests.cxx	/^  PetscInt   size;$/;"	m	struct:__anon14	file:
size	src/dm/impls/mesh/examples/tests/memoryTests.cxx	/^  PetscInt   size;$/;"	m	struct:__anon5	file:
size	src/dm/impls/mesh/examples/tests/sieveTests.cxx	/^  PetscInt   size;$/;"	m	struct:__anon11	file:
size	src/dm/impls/plex/examples/tests/ex6.c	/^  PetscInt  size;         \/* The number of set values *\/$/;"	m	struct:__anon2	file:
sizeHist	src/dm/impls/mesh/examples/tests/memoryParse.py	/^  sizeHist = {}$/;"	v
sizeLocalMeshV	include/sieve/Partitioner.hh	/^    static void sizeLocalMeshV(const Obj<Mesh>& mesh, const Obj<Section>& partition, Renumbering& renumbering, const Obj<Mesh>& localMesh, const int height = 0) {$/;"	f	class:ALE::Partitioner
sizeLocalSieveV	include/sieve/Partitioner.hh	/^    static void sizeLocalSieveV(const Obj<Sieve>& sieve, const Obj<Section>& partition, Renumbering& renumbering, const Obj<Sieve>& localSieve, const int height = 0) {$/;"	f	class:ALE::Partitioner
sizeOutput	src/dm/impls/mesh/examples/tests/memoryParse.py	/^  sizeOutput = []$/;"	v
sizeV	include/sieve/Mesh.hh	/^    int sizeV(Bundle& mesh) {$/;"	f	class:ALE::Discretization
sizeWithBC	include/sieve/CartesianSieve.hh	/^    int sizeWithBC(const Obj<Section_>& section, const point_type& p) {$/;"	f	class:ALE::CartesianMesh
sizeWithBC	include/sieve/Field.hh	/^    int sizeWithBC() const {$/;"	f	class:ALE::FEMSection
sizeWithBC	include/sieve/Field.hh	/^    int sizeWithBC() const {$/;"	f	class:ALE::GeneralSection
sizeWithBC	include/sieve/Field.hh	/^    int sizeWithBC() const {$/;"	f	class:ALE::Section
sizeWithBC	include/sieve/Field.hh	/^    int sizeWithBC() const {$/;"	f	class:ALE::UniformSection
sizeWithBC	include/sieve/Field.hh	/^    int sizeWithBC() {$/;"	f	class:ALE::NewUniformSection
sizeWithBC	include/sieve/IField.hh	/^    int sizeWithBC() const {return this->size();};$/;"	f	class:ALE::IUniformSection
sizeWithBC	include/sieve/Mesh.hh	/^    int sizeWithBC(PetscSection section, const point_type& p) {$/;"	f	class:ALE::IMesh
sizeWithBC	include/sieve/Mesh.hh	/^    int sizeWithBC(const Obj<Section>& section, const point_type& p) {$/;"	f	class:ALE::IMesh
sizeWithBC	include/sieve/Mesh.hh	/^    int sizeWithBC(const Obj<Section_>& section, const point_type& p) {$/;"	f	class:ALE::Bundle
sizeWithBC	include/sieve/Mesh.hh	/^    void sizeWithBC(PetscSection section, const point_type& p, PetscInt fieldSize[]) {$/;"	f	class:ALE::IMesh
size_type	include/sieve/ALE_mem.hh	/^    typedef std::size_t       size_type;$/;"	t	class:ALE::malloc_allocator
size_type	include/sieve/ALE_mem.hh	/^    typedef std::size_t size_type;$/;"	t	class:ALE::universal_allocator
size_type	include/sieve/ALE_mem.hh	/^    typedef typename Alloc::size_type       size_type;$/;"	t	class:ALE::polymorphic_allocator
size_type	include/sieve/ALE_mem.hh	/^    typedef typename Allocator::size_type size_type;$/;"	t	class:ALE::Obj
size_type	include/sieve/ALE_mem.hh	/^    typedef typename polymorphic_allocator<T>::size_type       size_type;$/;"	t	class:ALE::logged_allocator
size_type	include/sieve/Field.hh	/^      typedef typename Map::size_type size_type;$/;"	t	class:ALE::SetFromMap::const_iterator
size_type	include/sieve/Field.hh	/^    typedef typename Map::size_type size_type;$/;"	t	class:ALE::SetFromMap
sizes_type	include/sieve/Sections.hh	/^      typedef std::map<marker_type, int>       sizes_type;$/;"	t	class:ALE::New::PartitionSizeSection
skip	include/sieve/ISieve.hh	/^      size_t               skip, limit;$/;"	m	class:ALE::ISieveVisitor::PointRetriever
skipConstraints	include/sieve/ISieve.hh	/^      bool           skipConstraints;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
slots_nonmatching	include/petsc-private/vecimpl.h	/^  PetscInt       *slots_nonmatching;   \/* locations of "from"s  != "to"s *\/$/;"	m	struct:__anon26
sname	include/petsc-private/matimpl.h	/^  char        *bname,*sname,*mname;$/;"	m	struct:_p_MatBaseName
snes	include/petsc-private/linesearchimpl.h	/^  SNES                snes;     \/* temporary -- so we can pull out the function evaluation *\/$/;"	m	struct:_p_LineSearch
snes	include/petsc-private/tsimpl.h	/^  SNES  snes;$/;"	m	struct:_p_TS
snes_its	include/petsc-private/tsimpl.h	/^  PetscInt  snes_its;               \/* total number of nonlinear solver iterations *\/$/;"	m	struct:_p_TS
snesfunction	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*snesfunction)(SNES,Vec,Vec,TS);$/;"	m	struct:_TSOps
snesjacobian	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*snesjacobian)(SNES,Vec,Mat*,Mat*,MatStructure*,TS);$/;"	m	struct:_TSOps
socket	config/BuildSystem/RDict.py	/^    import socket$/;"	i
solution	include/petsc-private/tsimpl.h	/^  TSSolutionFunction solution;$/;"	m	struct:_DMTSOps
solutionctx	include/petsc-private/tsimpl.h	/^  void *solutionctx;$/;"	m	struct:_p_DMTS
solve	include/petsc-private/kspimpl.h	/^  PetscErrorCode (*solve)(KSP);                        \/* actual solver *\/$/;"	m	struct:_KSPOps
solve	include/petsc-private/matimpl.h	/^  PetscErrorCode (*solve)(Mat,Vec,Vec);$/;"	m	struct:_MatOps
solve	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*solve)(SNES);                                \/* actual nonlinear solver *\/$/;"	m	struct:_SNESOps
solve	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*solve)(TS);$/;"	m	struct:_TSOps
solveadd	include/petsc-private/matimpl.h	/^  PetscErrorCode (*solveadd)(Mat,Vec,Vec,Vec);$/;"	m	struct:_MatOps
solvertype	include/petsc-private/matimpl.h	/^  MatSolverPackage       solvertype;$/;"	m	struct:_p_Mat
solves	include/petsc-private/matimpl.h	/^  PetscErrorCode (*solves)(Mat, Vecs, Vecs);$/;"	m	struct:_MatOps
solvetime	include/petsc-private/tsimpl.h	/^  PetscReal solvetime;              \/* time at the conclusion of TSSolve() *\/$/;"	m	struct:_p_TS
solvetranspose	include/petsc-private/matimpl.h	/^  PetscErrorCode (*solvetranspose)(Mat,Vec,Vec);$/;"	m	struct:_MatOps
solvetransposeadd	include/petsc-private/matimpl.h	/^  PetscErrorCode (*solvetransposeadd)(Mat,Vec,Vec,Vec);$/;"	m	struct:_MatOps
sor	include/petsc-private/matimpl.h	/^  PetscErrorCode (*sor)(Mat,Vec,PetscReal,MatSORType,PetscReal,PetscInt,PetscInt,Vec);$/;"	m	struct:_MatOps
sort	include/petsc-private/isimpl.h	/^  PetscErrorCode (*sort)(IS);$/;"	m	struct:_ISOps
sortSourceFiles	config/builder.py	/^  def sortSourceFiles(self, fnames, objDir = None):$/;"	m	class:SourceFileManager
sort_indices	include/sieve/Overlap.hh	/^    sort_indices(const std::vector<point_type>& values) : values(values) {};$/;"	f	class:PETSc::Overlap::sort_indices
sort_indices	include/sieve/Overlap.hh	/^  class sort_indices {$/;"	c	class:PETSc::Overlap
sorted	config/PETSc/Configure.py	/^  def sorted(lst):$/;"	f
sorted	include/petsc-private/isimpl.h	/^  PetscErrorCode (*sorted)(IS,PetscBool*);$/;"	m	struct:_ISOps
source	include/sieve/ALE_containers.hh	/^    source_type source;$/;"	m	struct:ALE::Arrow
source	include/sieve/ALE_containers.hh	/^    source_type source;$/;"	m	struct:ALE::MinimalArrow
source	include/sieve/ISieve.hh	/^    const source_type source;$/;"	m	struct:ALE::SimpleArrow
source	include/sieve/LabelSifter.hh	/^          virtual const source_type& source() const {return this->_itor->source;};$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence::iterator
source	include/sieve/LabelSifter.hh	/^          virtual const source_type& source() const {return this->_itor->source;};$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence::reverse_iterator
source	include/sieve/LabelSifter.hh	/^      source_type source;$/;"	m	struct:ALE::NewSifterDef::Arrow
source	include/sieve/Sifter.hh	/^          virtual const source_type& source() const {return this->_itor->source;};$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence::iterator
source	include/sieve/Sifter.hh	/^          virtual const source_type& source() const {return this->_itor->source;};$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence::reverse_iterator
source	include/sieve/Sifter.hh	/^      source_type source;$/;"	m	struct:ALE::SifterDef::Arrow
source	src/dm/impls/mesh/examples/tests/ex00.c	/^struct source {};$/;"	s	file:
sourceChanger	include/sieve/ALE_containers.hh	/^      sourceChanger(const source_type& newSource) : _newSource(newSource) {};$/;"	f	struct:ALE::Arrow::sourceChanger
sourceChanger	include/sieve/ALE_containers.hh	/^    struct sourceChanger {$/;"	s	struct:ALE::Arrow
sourceChanger	include/sieve/LabelSifter.hh	/^        sourceChanger(const source_type& newSource) : _newSource(newSource) {};$/;"	f	struct:ALE::NewSifterDef::Arrow::sourceChanger
sourceChanger	include/sieve/LabelSifter.hh	/^      struct sourceChanger {$/;"	s	struct:ALE::NewSifterDef::Arrow
sourceChanger	include/sieve/Sifter.hh	/^        sourceChanger(const source_type& newSource) : _newSource(newSource) {};$/;"	f	struct:ALE::SifterDef::Arrow::sourceChanger
sourceChanger	include/sieve/Sifter.hh	/^      struct sourceChanger {$/;"	s	struct:ALE::SifterDef::Arrow
sourceColorTag	include/sieve/Sifter.hh	/^      struct                                   sourceColorTag{};$/;"	s	struct:ALE::SifterDef::ArrowContainerTraits
sourceDatabase	config/BuildSystem/build/compile/SIDL.py	/^    import sourceDatabase$/;"	i
sourceDatabase	config/BuildSystem/build/framework.py	/^import sourceDatabase$/;"	i
sourceDatabase	config/BuildSystem/maker.py	/^      import sourceDatabase$/;"	i
sourceRec_type	include/sieve/Sieve.hh	/^        typedef typename baseType::traits::sourceRec_type       sourceRec_type;$/;"	t	struct:ALE::Sieve::__anon9
sourceRec_type	include/sieve/Sifter.hh	/^      typedef typename cap_container_type::traits::rec_type                          sourceRec_type;$/;"	t	struct:ALE::ASifter::__anon2
sourceTargetTag	include/sieve/LabelSifter.hh	/^      struct                                   sourceTargetTag{};$/;"	s	struct:ALE::NewSifterDef::ArrowContainerTraits
sourceTargetTag	include/sieve/Sifter.hh	/^      struct                                   sourceTargetTag{};$/;"	s	struct:ALE::SifterDef::ArrowContainerTraits
source_type	include/sieve/ALE_containers.hh	/^    typedef Source_ source_type;$/;"	t	struct:ALE::Arrow
source_type	include/sieve/ALE_containers.hh	/^    typedef Source_ source_type;$/;"	t	struct:ALE::MinimalArrow
source_type	include/sieve/ISieve.hh	/^    typedef Source_ source_type;$/;"	t	struct:ALE::SimpleArrow
source_type	include/sieve/ISieve.hh	/^    typedef typename arrow_type::source_type   source_type;$/;"	t	class:ALE::IFSieve
source_type	include/sieve/LabelSifter.hh	/^      typedef Source_ source_type;$/;"	t	struct:ALE::NewSifterDef::Arrow
source_type	include/sieve/LabelSifter.hh	/^      typedef typename arrow_container_type::traits::source_type                     source_type;$/;"	t	struct:ALE::LabelSifter::__anon7
source_type	include/sieve/LabelSifter.hh	/^      typedef typename arrow_type::source_type source_type;$/;"	t	struct:ALE::NewSifterDef::ArrowContainerTraits
source_type	include/sieve/LabelSifter.hh	/^    typedef typename traits::source_type     source_type;$/;"	t	class:ALE::LabelSifter
source_type	include/sieve/Overlap.hh	/^  typedef point_type source_type;$/;"	t	class:PETSc::SendOverlap
source_type	include/sieve/Overlap.hh	/^  typedef rank_type  source_type;$/;"	t	class:PETSc::RecvOverlap
source_type	include/sieve/Sieve.hh	/^        typedef typename baseType::traits::source_type          source_type;$/;"	t	struct:ALE::Sieve::__anon9
source_type	include/sieve/Sifter.hh	/^      typedef Source_ source_type;$/;"	t	struct:ALE::SifterDef::Arrow
source_type	include/sieve/Sifter.hh	/^      typedef typename arrow_container_type::traits::source_type                     source_type;$/;"	t	struct:ALE::ASifter::__anon2
source_type	include/sieve/Sifter.hh	/^      typedef typename arrow_type::source_type source_type;$/;"	t	struct:ALE::SifterDef::ArrowContainerTraits
source_type	include/sieve/Sifter.hh	/^    typedef typename traits::source_type                                            source_type;$/;"	t	class:ALE::Sifter
sourcefiles	bin/pythonscripts/PetscStaticFunctionCandidates.py	/^sourcefiles = [os.path.join(root, name)$/;"	v
space	include/petsc-private/matimpl.h	/^  PetscMatStashSpace space_head,space;  \/* linked list to hold stashed global row\/column numbers and matrix values *\/$/;"	m	struct:__anon1
space_head	include/petsc-private/matimpl.h	/^  PetscMatStashSpace space_head,space;  \/* linked list to hold stashed global row\/column numbers and matrix values *\/$/;"	m	struct:__anon1
space_head	include/petsc-private/matimpl.h	/^  PetscScalar        *space_head,*val;$/;"	m	struct:_MatStashSpace
spacing	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^Obj<real_section_type>               spacing;$/;"	m	class:ALE::Hierarchy::HierarchyBuilder
spd	include/petsc-private/matimpl.h	/^  PetscBool              symmetric,hermitian,structurally_symmetric,spd;$/;"	m	struct:_p_Mat
spd_set	include/petsc-private/matimpl.h	/^  PetscBool              symmetric_set,hermitian_set,structurally_symmetric_set,spd_set; \/* if true, then corresponding flag is correct*\/$/;"	m	struct:_p_Mat
splitIncludes	config/BuildSystem/config/base.py	/^  def splitIncludes(self,incArgs):$/;"	m	class:Configure
splitLibs	config/BuildSystem/config/base.py	/^  def splitLibs(self,libArgs):$/;"	m	class:Configure
spptr	include/petsc-private/matimpl.h	/^  void                   *spptr;          \/* pointer for special library like SuperLU *\/$/;"	m	struct:_p_Mat
spptr	include/petsc-private/vecimpl.h	/^  void                   *spptr; \/* if we're using CUSP, then this is the special pointer to the array on the GPU *\/$/;"	m	struct:_p_Vec
spptr	include/petsc-private/vecimpl.h	/^  void           *spptr;$/;"	m	struct:_p_VecScatter
sqrt	config/PETSc/FEM.py	/^    from math import sqrt$/;"	i
sqrt	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*sqrt)(Vec);$/;"	m	struct:_VecOps
sshRetrieve	config/BuildSystem/retrieval.py	/^  def sshRetrieve(self, url, root, canExist = 0, force = 0):$/;"	f
sstatus	include/petsc-private/vecimpl.h	/^  MPI_Status             *sstatus,*rstatus;$/;"	m	struct:__anon29
st	include/petscdmdatypes.h	/^  DMDAStencilType  st;$/;"	m	struct:__anon5
stack	include/petsc-private/logimpl.h	/^  int *stack; \/* The storage *\/$/;"	m	struct:_n_PetscIntStack
stack	include/petsclog.h	/^  PetscIntStack    stack;       \/* The stack for active stages *\/$/;"	m	struct:_n_PetscStageLog
stageInfo	include/petsclog.h	/^  PetscStageInfo   *stageInfo;  \/* The information for each stage *\/$/;"	m	struct:_n_PetscStageLog
stageLog	include/sieve/ALE_mem.hh	/^    typedef std::map<std::string, std::pair<Log, Log> > stageLog;$/;"	t	class:ALE::MemoryLogger
stageNames	include/sieve/ALE_mem.hh	/^    names    stageNames;$/;"	m	class:ALE::MemoryLogger
stagePop	include/sieve/ALE_mem.hh	/^    void stagePop() {$/;"	f	class:ALE::MemoryLogger
stagePush	include/sieve/ALE_mem.hh	/^    void stagePush(const std::string& name) {$/;"	f	class:ALE::MemoryLogger
stage_registry	include/petsclog.hh	/^    static std::map<std::string,LogStage> stage_registry;$/;"	m	class:PETSc::Log
stageorder	include/petsc-private/tsimpl.h	/^    PetscInt   stageorder[16];   \/* stage order of each scheme *\/$/;"	m	struct:_p_TSAdapt::__anon8
stages	include/sieve/ALE_mem.hh	/^    stageLog stages;$/;"	m	class:ALE::MemoryLogger
staggered	bin/TOPSGenerator.py	/^          staggered = buttonbox(message="Are you using a staggered grid?", title=title, choices = ["No","Yes"],fontSize = 20)$/;"	v
stampBuild	config/BuildSystem/build/framework.py	/^  def stampBuild(self):$/;"	m	class:Framework
star	include/sieve/CartesianSieve.hh	/^    Obj<supportSequence> star(const point_type& p) {return this->support(p);};$/;"	f	class:ALE::CartesianSieve
star	include/sieve/Field.hh	/^    const Obj<supportArray>& star(const point_type& p) {$/;"	f	class:ALE::DiscreteSieve
star	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportSet> Sieve<Point_,Marker_,Color_>::star(const Obj<InputSequence>& points) {$/;"	f	class:ALE::Sieve
star	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportSet> Sieve<Point_,Marker_,Color_>::star(const Obj<InputSequence>& points, const Color_& color) {$/;"	f	class:ALE::Sieve
star	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportSet> Sieve<Point_,Marker_,Color_>::star(const Point_& p) {$/;"	f	class:ALE::Sieve
star	include/sieve/Sieve.hh	/^    Obj<typename Sieve<Point_,Marker_,Color_>::supportSet> Sieve<Point_,Marker_,Color_>::star(const Point_& p, const Color_& color) {$/;"	f	class:ALE::Sieve
star	include/sieve/SieveAlgorithms.hh	/^    static Obj<supportArray> star(const Obj<bundle_type>& bundle, const point_type& p) {$/;"	f	class:ALE::SieveAlg
start	include/sieve/BasicCommunication.hh	/^    void start() {$/;"	f	class:ALE::MPIMover
startCommunication	include/sieve/Field.hh	/^    void startCommunication() {$/;"	f	class:ALE::Field
startServer	config/BuildSystem/RDict.py	/^  def startServer(self, addrFilename):$/;"	m	class:RDict
startStdoutRedirect	include/sieve/Partitioner.hh	/^      void startStdoutRedirect() {$/;"	f	class:ALE::Chaco::Partitioner
startghostedin	include/petsc-private/dmdaimpl.h	/^  void                  *startghostedin[DMDA_MAX_WORK_ARRAYS],*startghostedout[DMDA_MAX_WORK_ARRAYS];$/;"	m	struct:__anon23
startghostedout	include/petsc-private/dmdaimpl.h	/^  void                  *startghostedin[DMDA_MAX_WORK_ARRAYS],*startghostedout[DMDA_MAX_WORK_ARRAYS];$/;"	m	struct:__anon23
startin	include/petsc-private/dmdaimpl.h	/^  void                  *startin[DMDA_MAX_WORK_ARRAYS],*startout[DMDA_MAX_WORK_ARRAYS];$/;"	m	struct:__anon23
startout	include/petsc-private/dmdaimpl.h	/^  void                  *startin[DMDA_MAX_WORK_ARRAYS],*startout[DMDA_MAX_WORK_ARRAYS];$/;"	m	struct:__anon23
starts	include/petsc-private/matimpl.h	/^  PetscInt   starts[4];$/;"	m	struct:__anon2
starts	include/petsc-private/vecimpl.h	/^  PetscInt               *starts;  \/* starting point in indices and values for each proc*\/$/;"	m	struct:__anon29
stash	include/petsc-private/matimpl.h	/^  MatStash               stash,bstash;     \/* used for assembling off-proc mat emements *\/$/;"	m	struct:_p_Mat
stash	include/petsc-private/vecimpl.h	/^  VecStash               stash,bstash; \/* used for storing off-proc values during assembly *\/$/;"	m	struct:_p_Vec
state	include/petsc-private/petscimpl.h	/^  PetscInt             state;$/;"	m	struct:_p_PetscObject
state	include/petscdmmesh_formats.hh	/^      ParserState  state;$/;"	m	class:ALE::Dolfin::XMLMesh
staticAssertSizeMatchesVoidStar	config/PETSc/Configure.py	/^    def staticAssertSizeMatchesVoidStar(inc,typename):$/;"	f	function:Configure.configureIntptrt
static_functions_for_file	bin/pythonscripts/PetscStaticFunctionCandidates.py	/^static_functions_for_file = defaultdict(list);$/;"	v
status	include/petsc-private/characteristicimpl.h	/^  MPI_Status  *status;          \/* Status structues for the persistent requests *\/$/;"	m	struct:_p_Characteristic
status	include/petsc-private/dmimpl.h	/^  DMVecStatus status;$/;"	m	struct:_DMNamedVecLink
statusbar	include/web/AMSSnoopObjects.py	/^statusbar = 0$/;"	v
statusbar	include/web/AMSSnoopStack.py	/^statusbar = 0$/;"	v
stderr	config/cmakegen.py	/^      from sys import stderr$/;"	i
stencil	include/petsc-private/matimpl.h	/^  MatStencilInfo         stencil;          \/* information for structured grid *\/$/;"	m	struct:_p_Mat
stencil_type	include/petsc-private/dmdaimpl.h	/^  DMDAStencilType       stencil_type;          \/* stencil, either box or star *\/$/;"	m	struct:__anon23
step	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*step)(TS);$/;"	m	struct:_TSOps
step	include/petsc-private/vecimpl.h	/^  PetscInt       step;$/;"	m	struct:__anon27
steps	include/petsc-private/tsimpl.h	/^  PetscInt  steps;                  \/* steps taken so far *\/$/;"	m	struct:_p_TS
steptol	include/petsc-private/linesearchimpl.h	/^  PetscReal           steptol;$/;"	m	struct:_p_LineSearch
stl	src/dm/impls/mesh/examples/tests/unitTests.cxx	/^  PetscBool  stl;           \/\/ Run the STL tests$/;"	m	struct:__anon23	file:
stol	include/petsc-private/snesimpl.h	/^  PetscReal   stol;               \/* step length tolerance*\/$/;"	m	struct:_p_SNES
stopStdoutRedirect	include/sieve/Partitioner.hh	/^      void stopStdoutRedirect() {$/;"	f	class:ALE::Chaco::Partitioner
store	config/builder.py	/^   def store():$/;"	f	function:PETScMaker.compileParallel
storeObjects	config/builder.py	/^ def storeObjects(self, objects):$/;"	m	class:PETScMaker
storeSubstitutions	config/BuildSystem/config/framework.py	/^  def storeSubstitutions(self, argDB):$/;"	m	class:Framework
stratify	include/sieve/CartesianSieve.hh	/^    virtual void stratify() {$/;"	f	class:ALE::CartesianBundle
stratify	include/sieve/Field.hh	/^    void stratify() {};$/;"	f	class:ALE::DiscreteSieve
stratify	include/sieve/Mesh.hh	/^    virtual void stratify() {$/;"	f	class:ALE::Bundle
stratify	include/sieve/Mesh.hh	/^    void stratify() {$/;"	f	class:ALE::IBundle
stratify	include/sieve/Sieve.hh	/^    void Sieve<Point_,Marker_,Color_>::stratify(bool show) {$/;"	f	class:ALE::Sieve
stratify	include/sieve/Topology.hh	/^    void stratify() {$/;"	f	class:ALE::Topology
stratumOffsets	include/petsc-private/dmpleximpl.h	/^  PetscInt *stratumOffsets; \/* Offset of each stratum *\/$/;"	m	struct:_n_DMLabel
stratumOffsets	include/petsc-private/meshimpl.h	/^  PetscInt  *stratumOffsets; \/* Offset of each stratum *\/$/;"	m	struct:Sieve_Label
stratumSizes	include/petsc-private/dmpleximpl.h	/^  PetscInt *stratumSizes;   \/* Size of each stratum *\/$/;"	m	struct:_n_DMLabel
stratumSizes	include/petsc-private/meshimpl.h	/^  PetscInt  *stratumSizes;   \/* Size of each stratum *\/$/;"	m	struct:Sieve_Label
stratumValues	include/petsc-private/dmpleximpl.h	/^  PetscInt *stratumValues;  \/* Value of each stratum *\/$/;"	m	struct:_n_DMLabel
stratumValues	include/petsc-private/meshimpl.h	/^  PetscInt  *stratumValues;  \/* Value of each stratum *\/$/;"	m	struct:Sieve_Label
stress	src/dm/impls/mesh/examples/tests/unitTests.cxx	/^  PetscBool  stress;        \/\/ Run the stress tests$/;"	m	struct:__anon23	file:
strict_aggs	include/petsc-private/matimpl.h	/^  PetscBool strict_aggs;$/;"	m	struct:_p_MatCoarsen
stridegather	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*stridegather)(Vec,PetscInt,Vec,InsertMode);$/;"	m	struct:_VecOps
stridescatter	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*stridescatter)(Vec,PetscInt,Vec,InsertMode);$/;"	m	struct:_VecOps
string	bin/TOPSInstaller.py	/^import string$/;"	i
string	bin/parseargs.py	/^    import string$/;"	i
string	bin/taucc.py	/^import string$/;"	i
string	bin/urlget.py	/^import string$/;"	i
string	config/BuildSystem/setsplicers.py	/^import string$/;"	i
string	config/PETSc/utilities/cacheDetails.py	/^import string$/;"	i
string	config/cmakeboot.py	/^import os,sys,string$/;"	i
string	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*string)(PetscDraw,PetscReal,PetscReal,int,const char[]);$/;"	m	struct:_PetscDrawOps
string	include/sieve/ALE_exception.hh	/^typedef std::string                    string;$/;"	t
stringgetsize	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*stringgetsize)(PetscDraw,PetscReal*,PetscReal*);$/;"	m	struct:_PetscDrawOps
stringsetsize	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*stringsetsize)(PetscDraw,PetscReal,PetscReal);$/;"	m	struct:_PetscDrawOps
stringvertical	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*stringvertical)(PetscDraw,PetscReal,PetscReal,int,const char[]);$/;"	m	struct:_PetscDrawOps
stripsplit	config/cmakegen.py	/^    def stripsplit(line):$/;"	f	function:pkgsources.compareSourceLists
struct	config/BuildSystem/maker.py	/^class struct:$/;"	c
structlocation	include/petsc-private/bagimpl.h	/^  void         *structlocation;$/;"	m	struct:_n_PetscBag
structurally_symmetric	include/petsc-private/matimpl.h	/^  PetscBool              symmetric,hermitian,structurally_symmetric,spd;$/;"	m	struct:_p_Mat
structurally_symmetric_set	include/petsc-private/matimpl.h	/^  PetscBool              symmetric_set,hermitian_set,structurally_symmetric_set,spd_set; \/* if true, then corresponding flag is correct*\/$/;"	m	struct:_p_Mat
structured	include/petsc-private/characteristicimpl.h	/^  PetscBool    structured;      \/* Flag for mesh type *\/$/;"	m	struct:_p_Characteristic
stubs	config/builder2.py	/^def stubs(args):$/;"	f
subCells	include/sieve/Selection.hh	/^      PointSet              *subCells;$/;"	m	class:ALE::Selection::FaceInserterV
subCells	include/sieve/Selection.hh	/^      PointSet             *subCells;$/;"	m	class:ALE::Selection::FaceInserter
subSieve	include/sieve/Selection.hh	/^      const Obj<Sieve>&      subSieve;$/;"	m	class:ALE::Selection::FaceInserterV
subSieve	include/sieve/Selection.hh	/^      const Obj<sieve_type> subSieve;$/;"	m	class:ALE::Selection::FaceInserter
subctx	include/petsc-private/matimpl.h	/^  void        *subctx;$/;"	m	struct:_p_MatCoarsen
subdomainhook	include/petsc-private/dmimpl.h	/^  DMSubDomainHookLink     subdomainhook;$/;"	m	struct:_p_DM
subkey	include/sieve/LabelSifter.hh	/^        subkey_type                                               subkey;$/;"	m	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
subkey	include/sieve/Sifter.hh	/^        subkey_type                                               subkey;$/;"	m	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
subkey_type	include/sieve/LabelSifter.hh	/^        typedef SubKey_                                                 subkey_type;$/;"	t	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
subkey_type	include/sieve/Sifter.hh	/^        typedef SubKey_                                                 subkey_type;$/;"	t	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
submesh	include/sieve/Selection.hh	/^    static Obj<mesh_type> submesh(const Obj<mesh_type>& mesh, const Obj<Points>& points, const int dim = -1) {$/;"	f	class:ALE::Selection
submesh	include/sieve/Selection.hh	/^    static Obj<mesh_type> submesh(const Obj<mesh_type>& mesh, const Obj<int_section_type>& label, const int dimension = -1) {$/;"	f	class:ALE::Selection
submeshV	include/sieve/Selection.hh	/^    static Obj<output_mesh_type> submeshV(const Obj<mesh_type>& mesh, const Obj<int_section_type>& label, const int dimension = -1) {$/;"	f	class:ALE::Selection
submeshV_uninterpolated	include/sieve/Selection.hh	/^    static Obj<output_mesh_type> submeshV_uninterpolated(const Obj<mesh_type>& mesh, const Obj<int_section_type>& label, const int dimension = -1, const bool boundaryFaces = true) {$/;"	f	class:ALE::Selection
submesh_interpolated	include/sieve/Selection.hh	/^    static Obj<mesh_type> submesh_interpolated(const Obj<mesh_type>& mesh, const Obj<int_section_type>& label, const int dimension = -1, const bool boundaryFaces = true) {$/;"	f	class:ALE::Selection
submesh_uninterpolated	include/sieve/Selection.hh	/^    static Obj<mesh_type> submesh_uninterpolated(const Obj<mesh_type>& mesh, const Obj<int_section_type>& label, const int dimension = -1, const bool boundaryFaces = true) {$/;"	f	class:ALE::Selection
subordinatePartition	include/sieve/Partitioner.hh	/^      static PartitionType *subordinatePartition(const Obj<bundle_type>& bundle, int levels, const Obj<bundle_type>& subBundle, PartitionType assignment[]) {$/;"	f	class:ALE::New::Partitioner
subparsers	config/builder2.py	/^  subparsers = parser.add_subparsers(help='build actions')$/;"	v
subpointMap	include/petsc-private/dmpleximpl.h	/^  DMLabel              subpointMap;       \/* Label each original mesh point in the submesh with its depth, subpoint are the implicit numbering *\/$/;"	m	struct:__anon30
subprocess	config/BuildSystem/script.py	/^  import subprocess$/;"	i
subprocess	config/builder.py	/^   import subprocess$/;"	i
subsets	include/sieve/Selection.hh	/^    static void subsets(const PointArray& v, const int size, Processor& processor, Obj<PointArray> *out = NULL, const int min = 0) {$/;"	f	class:ALE::Selection
substitute	config/BuildSystem/config/framework.py	/^  def substitute(self):$/;"	m	class:Framework
substituteFile	config/BuildSystem/config/framework.py	/^  def substituteFile(self, inName, outName):$/;"	m	class:Framework
substituteName	config/BuildSystem/config/framework.py	/^  def substituteName(self, match, prefix = None):$/;"	m	class:Framework
subtract	include/sieve/ALE_containers.hh	/^    inline void subtract(Obj<set> s) {$/;"	f	class:ALE::set
success	include/petsc-private/linesearchimpl.h	/^  PetscBool           success;$/;"	m	struct:_p_LineSearch
sum	include/petscsys.hh	/^    inline value_type sum() const {value_type s = 0.0; for(int d = 0; d < dim; ++d) {s += x[d];} return s;};$/;"	f	struct:PETSc::Point
super	include/sieve/ALE_args.hh	/^    typedef ::boost::program_options::variable_value super;$/;"	t	struct:ALE::ArgValue
super	include/sieve/ALE_args.hh	/^    typedef ::boost::program_options::variables_map super;$/;"	t	class:ALE::ArgDB
super	include/sieve/ALE_containers.hh	/^    typedef std::set<Element_, typename Element_::less_than, ALE_ALLOCATOR<Element_> > super;$/;"	t	class:ALE::set
support	include/sieve/CartesianSieve.hh	/^    Obj<supportSequence> support(const point_type& p) {$/;"	f	class:ALE::CartesianSieve
support	include/sieve/Field.hh	/^    const Obj<supportSequence>& support(const Input& p) {return this->_empty;}$/;"	f	class:ALE::DiscreteSieve
support	include/sieve/Field.hh	/^    const Obj<supportSequence>& support(const point_type& p) {return this->_empty;}$/;"	f	class:ALE::DiscreteSieve
support	include/sieve/ISieve.hh	/^    const Obj<supportSequence>& support(const point_type& p) const {$/;"	f	class:ALE::IFSieve
support	include/sieve/ISieve.hh	/^    void support(const PointSequence& points, Visitor& v) const {$/;"	f	class:ALE::IFSieve
support	include/sieve/ISieve.hh	/^    void support(const point_type& p, Visitor& v) const {$/;"	f	class:ALE::IFSieve
support	include/sieve/LabelSifter.hh	/^    support(const Obj<InputSequence>& points){$/;"	f	class:ALE::LabelSifter
support	include/sieve/LabelSifter.hh	/^    support(const typename traits::source_type& p) {$/;"	f	class:ALE::LabelSifter
support	include/sieve/Overlap.hh	/^  supportSequence support(point_type point) {$/;"	f	class:PETSc::SendOverlap
support	include/sieve/Sifter.hh	/^    support(const Obj<InputSequence>& points, const typename traits::color_type& color, bool useColor = true){$/;"	f	class:ALE::ASifter
support	include/sieve/Sifter.hh	/^    support(const Obj<InputSequence>& sources) {$/;"	f	class:ALE::ASifter
support	include/sieve/Sifter.hh	/^    support(const typename traits::source_type& p) {$/;"	f	class:ALE::ASifter
support	include/sieve/Sifter.hh	/^    support(const typename traits::source_type& p, const typename traits::color_type& color) {$/;"	f	class:ALE::ASifter
supportApply	include/sieve/LabelSifter.hh	/^    void supportApply(const typename traits::source_type& p, PointProcess& processor) {$/;"	f	class:ALE::LabelSifter
supportApply	include/sieve/Sifter.hh	/^    void supportApply(const typename traits::source_type& p, PointProcess& processor) {$/;"	f	class:ALE::ASifter
supportArray	include/sieve/CartesianSieve.hh	/^    typedef supportSequence supportArray;$/;"	t	class:ALE::CartesianSieve
supportArray	include/sieve/Field.hh	/^    typedef std::vector<point_type, alloc_type> supportArray;$/;"	t	class:ALE::DiscreteSieve
supportArray	include/sieve/ISieve.hh	/^    typedef pointArray             supportArray;$/;"	t	class:ALE::IFSieve
supportArray	include/sieve/LabelSifter.hh	/^      typedef ALE::array<target_type> supportArray;$/;"	t	struct:ALE::LabelSifter::__anon7
supportArray	include/sieve/Mesh.hh	/^    typedef typename base_type::supportArray          supportArray;$/;"	t	class:ALE::Mesh
supportArray	include/sieve/Mesh.hh	/^    typedef typename sieve_alg_type::supportArray                     supportArray;$/;"	t	class:ALE::Bundle
supportArray	include/sieve/Mesh.hh	/^    typedef typename sieve_alg_type::supportArray                     supportArray;$/;"	t	class:ALE::IBundle
supportArray	include/sieve/Sieve.hh	/^      typedef pointArray              supportArray;$/;"	t	class:ALE::Sieve
supportArray	include/sieve/SieveAlgorithms.hh	/^    typedef typename sieve_type::supportArray        supportArray;$/;"	t	class:ALE::SieveAlg
supportArray	include/sieve/Sifter.hh	/^      typedef ALE::array<target_type> supportArray;$/;"	t	struct:ALE::ASifter::__anon2
supportBegin	include/sieve/Overlap.hh	/^  typename supportSequence::iterator supportBegin(rank_type rank) {$/;"	f	class:PETSc::RecvOverlap
supportBegin	include/sieve/Overlap.hh	/^  typename supportSequence::iterator supportBegin(rank_type rank, point_type remotePoint) {$/;"	f	class:PETSc::RecvOverlap
supportBegin	include/sieve/Sifter.hh	/^    supportBegin(const typename traits::source_type& p) {$/;"	f	class:ALE::ASifter
supportBegin	include/sieve/Sifter.hh	/^    supportBegin(const typename traits::source_type& p, const typename traits::color_type& color) {$/;"	f	class:ALE::ASifter
supportContains	include/sieve/LabelSifter.hh	/^    bool supportContains(const typename traits::source_type& p, const PointCheck& checker) {$/;"	f	class:ALE::LabelSifter
supportContains	include/sieve/Sifter.hh	/^    bool supportContains(const typename traits::source_type& p, const PointCheck& checker) {$/;"	f	class:ALE::ASifter
supportEnd	include/sieve/Overlap.hh	/^  typename supportSequence::iterator supportEnd(rank_type rank) {$/;"	f	class:PETSc::RecvOverlap
supportEnd	include/sieve/Sifter.hh	/^    supportEnd(const typename traits::source_type& p) {$/;"	f	class:ALE::ASifter
supportEnd	include/sieve/Sifter.hh	/^    supportEnd(const typename traits::source_type& p, const typename traits::color_type& color) {$/;"	f	class:ALE::ASifter
supportInd	include/sieve/LabelSifter.hh	/^      typedef typename arrow_container_type::traits::sourceTargetTag                 supportInd;$/;"	t	struct:ALE::LabelSifter::__anon7
supportInd	include/sieve/Sieve.hh	/^        typedef typename baseType::traits::supportInd           supportInd;$/;"	t	struct:ALE::Sieve::__anon9
supportInd	include/sieve/Sifter.hh	/^      typedef typename arrow_container_type::traits::sourceColorTag                  supportInd;$/;"	t	struct:ALE::ASifter::__anon2
supportOffsets	include/sieve/ISieve.hh	/^    offsets_type         supportOffsets;$/;"	m	class:ALE::IFSieve
supportSection	include/petsc-private/dmpleximpl.h	/^  PetscSection         supportSection;    \/* Layout of cones (inedges for DAG) *\/$/;"	m	struct:__anon30
supportSection	include/petsc-private/meshimpl.h	/^  PetscSection         supportSection; \/* Layout of cones (inedges for DAG) *\/$/;"	m	struct:__anon16
supportSeq	include/sieve/ISieve.hh	/^    Obj<supportSequence> supportSeq;$/;"	m	class:ALE::IFSieve
supportSequence	include/sieve/CartesianSieve.hh	/^    typedef CartesianSieveDef::SupportSequence<point_type> supportSequence;$/;"	t	class:ALE::CartesianSieve
supportSequence	include/sieve/CartesianSieve.hh	/^    typedef sieve_type::supportSequence        supportSequence;$/;"	t	class:ALE::CartesianMesh
supportSequence	include/sieve/Field.hh	/^    typedef std::vector<point_type, alloc_type> supportSequence;$/;"	t	class:ALE::DiscreteSieve
supportSequence	include/sieve/ISieve.hh	/^    typedef typename IFSieveDef::Sequence<point_type> supportSequence;$/;"	t	class:ALE::IFSieve
supportSequence	include/sieve/LabelSifter.hh	/^        supportSequence(const supportSequence& seq) : base_type(seq), _graph(seq._graph) {};$/;"	f	struct:ALE::LabelSifter::__anon7::supportSequence
supportSequence	include/sieve/LabelSifter.hh	/^        supportSequence(graph_type& graph, typename traits::index_type& index, const typename base_type::key_type& k) : base_type(index, k), _graph(graph){};$/;"	f	struct:ALE::LabelSifter::__anon7::supportSequence
supportSequence	include/sieve/LabelSifter.hh	/^        supportSequence(graph_type& graph, typename traits::index_type& index, const typename base_type::key_type& k, const typename base_type::subkey_type& kk) : base_type(index, k, kk), _graph(graph) {};$/;"	f	struct:ALE::LabelSifter::__anon7::supportSequence
supportSequence	include/sieve/LabelSifter.hh	/^      struct supportSequence : public arrow_container_type::traits::template ArrowSequence<typename ::boost::multi_index::index<typename arrow_container_type::set_type,supportInd>::type, source_type, target_type, BOOST_MULTI_INDEX_MEMBER(arrow_type, target_type, target)> {$/;"	s	struct:ALE::LabelSifter::__anon7
supportSequence	include/sieve/LabelSifter.hh	/^    typedef typename traits::supportSequence supportSequence;$/;"	t	class:ALE::LabelSifter
supportSequence	include/sieve/Overlap.hh	/^  typedef DualSequence<point_type,point_type> supportSequence;$/;"	t	class:PETSc::RecvOverlap
supportSequence	include/sieve/Overlap.hh	/^  typedef DualSequence<rank_type,point_type>  supportSequence;$/;"	t	class:PETSc::SendOverlap
supportSequence	include/sieve/Sieve.hh	/^        typedef typename baseType::traits::supportSequence      supportSequence;$/;"	t	struct:ALE::Sieve::__anon9
supportSequence	include/sieve/Sifter.hh	/^        supportSequence(const supportSequence& seq) : base_type(seq), _graph(seq._graph) {};$/;"	f	struct:ALE::ASifter::__anon2::supportSequence
supportSequence	include/sieve/Sifter.hh	/^        supportSequence(graph_type& graph, typename traits::index_type& index, const typename base_type::key_type& k) : base_type(index, k), _graph(graph){};$/;"	f	struct:ALE::ASifter::__anon2::supportSequence
supportSequence	include/sieve/Sifter.hh	/^        supportSequence(graph_type& graph, typename traits::index_type& index, const typename base_type::key_type& k, const typename base_type::subkey_type& kk) : base_type(index, k, kk), _graph(graph) {};$/;"	f	struct:ALE::ASifter::__anon2::supportSequence
supportSequence	include/sieve/Sifter.hh	/^      struct supportSequence : public arrow_container_type::traits::template ArrowSequence<typename ::boost::multi_index::index<typename arrow_container_type::set_type,supportInd>::type, source_type, color_type, BOOST_MULTI_INDEX_MEMBER(arrow_type, target_type, target)> {$/;"	s	struct:ALE::ASifter::__anon2
supportSequence	include/sieve/Sifter.hh	/^    typedef typename traits::supportSequence                                        supportSequence;$/;"	t	class:ALE::Sifter
supportSequence	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^typedef ALE::Mesh::sieve_type::traits::supportSequence  supportSequence;$/;"	t	namespace:ALE::Hierarchy
supportSet	include/sieve/CartesianSieve.hh	/^    typedef supportSequence supportSet;$/;"	t	class:ALE::CartesianSieve
supportSet	include/sieve/Field.hh	/^    typedef std::vector<point_type, alloc_type> supportSet;$/;"	t	class:ALE::DiscreteSieve
supportSet	include/sieve/ISieve.hh	/^    typedef pointSet               supportSet;$/;"	t	class:ALE::IFSieve
supportSet	include/sieve/LabelSifter.hh	/^      typedef std::set<target_type, std::less<target_type>, typename Alloc_::template rebind<source_type>::other> supportSet;$/;"	t	struct:ALE::LabelSifter::__anon7
supportSet	include/sieve/Sieve.hh	/^      typedef pointSet                supportSet;$/;"	t	class:ALE::Sieve
supportSet	include/sieve/SieveAlgorithms.hh	/^    typedef typename sieve_type::supportSet          supportSet;$/;"	t	class:ALE::SieveAlg
supportSet	include/sieve/Sifter.hh	/^      typedef std::set<target_type>   supportSet;$/;"	t	struct:ALE::ASifter::__anon2
supportSet	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^typedef ALE::Mesh::sieve_type::supportSet               supportSet;$/;"	t	namespace:ALE::Hierarchy
support_compare_type	include/sieve/Sifter.hh	/^      typedef SupportCompare_                  support_compare_type;$/;"	t	struct:ALE::SifterDef::ArrowContainerTraits
support_compare_type	include/sieve/Sifter.hh	/^      typedef typename arrow_container_type::traits::support_compare_type            support_compare_type;$/;"	t	struct:ALE::ASifter::__anon2
supports	include/petsc-private/dmpleximpl.h	/^  PetscInt            *supports;          \/* Cone for each point *\/$/;"	m	struct:__anon30
supports	include/petsc-private/meshimpl.h	/^  PetscInt            *supports;       \/* Cone for each point *\/$/;"	m	struct:__anon16
supports	include/sieve/ISieve.hh	/^    supports_type        supports;$/;"	m	class:ALE::IFSieve
supports_type	include/sieve/ISieve.hh	/^    typedef point_type *supports_type;$/;"	t	class:ALE::IFSieve
svalues	include/petsc-private/matimpl.h	/^  PetscScalar   *svalues;               \/* sending data *\/$/;"	m	struct:__anon1
svalues	include/petsc-private/vecimpl.h	/^  PetscScalar   *svalues,*rvalues;      \/* sending and receiving data *\/$/;"	m	struct:__anon24
svnRetrieve	config/BuildSystem/retrieval.py	/^  def svnRetrieve(self, url, root, name,force):$/;"	m	class:Retriever
sw	include/petscdmdatypes.h	/^  PetscInt         dim,dof,sw;$/;"	m	struct:__anon5
swap	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*swap)(Vec,Vec);                               \/* exchange x and y *\/$/;"	m	struct:_VecOps
swap	include/sieve/ISieve.hh	/^      inline void swap(value_type& v, value_type& w) {$/;"	f	class:ALE::ISieveVisitor::RestrictVecVisitor
symmetric	include/petsc-private/matimpl.h	/^  PetscBool              symmetric,hermitian,structurally_symmetric,spd;$/;"	m	struct:_p_Mat
symmetric_arrow_type	src/dm/impls/mesh/examples/tests/xsieveTest.hh	/^      typedef ALE::XSieveDef::Arrow<int,int,char>       symmetric_arrow_type;$/;"	t	struct:ALE::Test::XSieveTester
symmetric_difference	config/BuildSystem/config/setsBackport.py	/^    def symmetric_difference(self, other):$/;"	m	class:BaseSet
symmetric_difference	config/BuildSystem/config/setsOrdered.py	/^    def symmetric_difference(self, other):$/;"	m	class:BaseSet
symmetric_difference_update	config/BuildSystem/config/setsBackport.py	/^    def symmetric_difference_update(self, other):$/;"	m	class:Set
symmetric_difference_update	config/BuildSystem/config/setsOrdered.py	/^    def symmetric_difference_update(self, other):$/;"	m	class:Set
symmetric_eternal	include/petsc-private/matimpl.h	/^  PetscBool              symmetric_eternal;$/;"	m	struct:_p_Mat
symmetric_set	include/petsc-private/matimpl.h	/^  PetscBool              symmetric_set,hermitian_set,structurally_symmetric_set,spd_set; \/* if true, then corresponding flag is correct*\/$/;"	m	struct:_p_Mat
symmetric_xsieve_type	src/dm/impls/mesh/examples/tests/xsieveTest.hh	/^      typedef ALE::XSieve<symmetric_arrow_type>         symmetric_xsieve_type;$/;"	t	struct:ALE::Test::XSieveTester
symmetrize	include/sieve/ISieve.hh	/^    void symmetrize() {$/;"	f	class:ALE::IFSieve
symmetrizeSizes	include/sieve/ISieve.hh	/^    void symmetrizeSizes(const int numCells, const int numCorners, const int cones[], const int offset = 0) {$/;"	f	class:ALE::IFSieve
synchronizedclear	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*synchronizedclear)(PetscDraw);$/;"	m	struct:_PetscDrawOps
synchronizedflush	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*synchronizedflush)(PetscDraw);$/;"	m	struct:_PetscDrawOps
sys	bin/TOPSGenerator.py	/^        import sys$/;"	i
sys	bin/TOPSInstaller.py	/^        f.write('  import sys\\n')$/;"	i
sys	bin/TOPSInstaller.py	/^        import sys$/;"	i
sys	bin/TOPSInstaller.py	/^import sys$/;"	i
sys	bin/adiforfix.py	/^import sys$/;"	i
sys	bin/configVars.py	/^import os, sys$/;"	i
sys	bin/parseargs.py	/^    import sys$/;"	i
sys	bin/petscnagupgrade.py	/^import os.path, time,sys$/;"	i
sys	bin/portabilitycheck.py	/^import sys$/;"	i
sys	bin/processSummary.py	/^    import sys$/;"	i
sys	bin/pythonscripts/PetscGenerateFEMQuadrature.py	/^import os, sys$/;"	i
sys	bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py	/^import os, sys$/;"	i
sys	bin/pythonscripts/petsc_conf.py	/^    import sys, os$/;"	i
sys	bin/taucc.py	/^import sys$/;"	i
sys	bin/update.py	/^import sys$/;"	i
sys	bin/urlget.py	/^import sys$/;"	i
sys	config/BuildSystem/RDict.py	/^    import sys$/;"	i
sys	config/BuildSystem/RDict.py	/^  import sys$/;"	i
sys	config/BuildSystem/RDict.py	/^import sys$/;"	i
sys	config/BuildSystem/args.py	/^        import sys$/;"	i
sys	config/BuildSystem/args.py	/^      import sys$/;"	i
sys	config/BuildSystem/build/buildGraph.py	/^    import sys$/;"	i
sys	config/BuildSystem/build/framework.py	/^import sys$/;"	i
sys	config/BuildSystem/checkdlllibs.py	/^import sys$/;"	i
sys	config/BuildSystem/config/base.py	/^    import sys$/;"	i
sys	config/BuildSystem/config/compile/C.py	/^    import sys$/;"	i
sys	config/BuildSystem/config/compile/C.py	/^import sys$/;"	i
sys	config/BuildSystem/config/compile/CUDA.py	/^import sys$/;"	i
sys	config/BuildSystem/config/compile/Cxx.py	/^    import sys$/;"	i
sys	config/BuildSystem/config/compile/FC.py	/^    import sys$/;"	i
sys	config/BuildSystem/config/compile/SIDL.py	/^    import sys$/;"	i
sys	config/BuildSystem/config/framework.py	/^      import sys$/;"	i
sys	config/BuildSystem/config/framework.py	/^    import time, sys$/;"	i
sys	config/BuildSystem/config/package.py	/^    import sys$/;"	i
sys	config/BuildSystem/config/packages/BlasLapack.py	/^  import sys$/;"	i
sys	config/BuildSystem/config/packages/MPI.py	/^        import sys$/;"	i
sys	config/BuildSystem/config/packages/MPI.py	/^  import sys$/;"	i
sys	config/BuildSystem/config/packages/PETSc.py	/^    import sys$/;"	i
sys	config/BuildSystem/config/packages/PETSc.py	/^  import sys$/;"	i
sys	config/BuildSystem/config/packages/fiat.py	/^    import sys$/;"	i
sys	config/BuildSystem/config/packages/fiat.py	/^import os, sys$/;"	i
sys	config/BuildSystem/config/packages/scientificpython.py	/^    import sys$/;"	i
sys	config/BuildSystem/config/packages/scientificpython.py	/^import os, sys$/;"	i
sys	config/BuildSystem/config/preTests.py	/^import os, sys$/;"	i
sys	config/BuildSystem/config/programs.py	/^    import sys$/;"	i
sys	config/BuildSystem/config/setCompilers.py	/^        import sys,traceback$/;"	i
sys	config/BuildSystem/getsplicers.py	/^import sys$/;"	i
sys	config/BuildSystem/graph.py	/^    import sys$/;"	i
sys	config/BuildSystem/help.py	/^      import sys$/;"	i
sys	config/BuildSystem/logger.py	/^      import sys$/;"	i
sys	config/BuildSystem/logger.py	/^import sys$/;"	i
sys	config/BuildSystem/maker.py	/^      import sys$/;"	i
sys	config/BuildSystem/maker.py	/^      import sys, traceback$/;"	i
sys	config/BuildSystem/maker.py	/^    import sys$/;"	i
sys	config/BuildSystem/patch.py	/^  import sys$/;"	i
sys	config/BuildSystem/pythonpath.py	/^import sys$/;"	i
sys	config/BuildSystem/regression/buildtest.py	/^      import sys$/;"	i
sys	config/BuildSystem/regression/buildtest.py	/^  import sys$/;"	i
sys	config/BuildSystem/regression/testCase.py	/^      import sys$/;"	i
sys	config/BuildSystem/script.py	/^import sys$/;"	i
sys	config/BuildSystem/setsplicers.py	/^import sys$/;"	i
sys	config/BuildSystem/sidldllpath.py	/^import sys$/;"	i
sys	config/BuildSystem/sourceDatabase.py	/^  import sys$/;"	i
sys	config/PETSc/Configure.py	/^    f.write('  import sys\\n')$/;"	i
sys	config/PETSc/Configure.py	/^    import sys$/;"	i
sys	config/PETSc/FEM.py	/^    import sys, os$/;"	i
sys	config/PETSc/package.py	/^import sys$/;"	i
sys	config/PETSc/packages/FFC.py	/^    import sys$/;"	i
sys	config/PETSc/packages/Generator.py	/^        import sys$/;"	i
sys	config/PETSc/packages/Numpy.py	/^    import os, sys$/;"	i
sys	config/PETSc/packages/Sieve.py	/^    import sys$/;"	i
sys	config/PETSc/packages/Triangle.py	/^    import os, sys$/;"	i
sys	config/PETSc/packages/ctetgen.py	/^    import sys$/;"	i
sys	config/PETSc/packages/petsc4py.py	/^      import sys$/;"	i
sys	config/PETSc/packages/sowing.py	/^          import os,sys$/;"	i
sys	config/PETSc/packages/tetgen.py	/^    import os, sys$/;"	i
sys	config/PETSc/petsc.py	/^    import sys$/;"	i
sys	config/PETSc/petsc.py	/^  import sys$/;"	i
sys	config/PETSc/utilities/arch.py	/^        import sys$/;"	i
sys	config/PETSc/utilities/cacheDetails.py	/^import sys$/;"	i
sys	config/PETSc/utilities/debuggers.py	/^          import sys$/;"	i
sys	config/PETSc/utilities/sharedLibraries.py	/^    import sys$/;"	i
sys	config/builder.py	/^import os, sys$/;"	i
sys	config/builder2.py	/^import os, sys$/;"	i
sys	config/cmakeboot.py	/^import os,sys,string$/;"	i
sys	config/configure.py	/^import os, sys$/;"	i
sys	config/examples/arch-aix64-dbg.py	/^  import sys,os$/;"	i
sys	config/examples/arch-bgp-ibm-opt.py	/^  import sys,os$/;"	i
sys	config/examples/arch-c-exodus-dbg-builder.py	/^  import sys$/;"	i
sys	config/examples/arch-cray-xt5-opt.py	/^  import sys,os$/;"	i
sys	config/examples/arch-cray-xt6-pkgs-opt.py	/^  import sys$/;"	i
sys	config/examples/arch-cuda-cg-opt.py	/^  import sys$/;"	i
sys	config/examples/arch-cuda-double.py	/^  import sys$/;"	i
sys	config/examples/arch-cuda.py	/^  import sys$/;"	i
sys	config/examples/arch-cuda5-cg-opt.py	/^  import sys$/;"	i
sys	config/examples/arch-freebsd-cxx-cmplx-pkgs-dbg.py	/^  import sys,os$/;"	i
sys	config/examples/arch-freebsd-cxx-pkgs-opt.py	/^  import sys,os$/;"	i
sys	config/examples/arch-freebsd-pkgs-opt.py	/^  import sys,os$/;"	i
sys	config/examples/arch-fusion-intel-c-opt.py	/^  import sys$/;"	i
sys	config/examples/arch-linux-c89.py	/^  import sys,os$/;"	i
sys	config/examples/arch-linux-complex-gcov.py	/^  import sys,os$/;"	i
sys	config/examples/arch-linux-cxx-sieve-gcov.py	/^  import sys,os$/;"	i
sys	config/examples/arch-linux-cxx-sieve.py	/^  import sys,os$/;"	i
sys	config/examples/arch-linux-dbg-quad.py	/^  import sys,os$/;"	i
sys	config/examples/arch-linux-gcc-absoft.py	/^    import sys,os$/;"	i
sys	config/examples/arch-linux-gcc-ifc.py	/^  import sys,os$/;"	i
sys	config/examples/arch-linux-gcc-pgf90.py	/^  import sys,os$/;"	i
sys	config/examples/arch-linux-gcc-real-opt.py	/^  import sys$/;"	i
sys	config/examples/arch-linux-gcc-real.py	/^  import sys$/;"	i
sys	config/examples/arch-linux-gcov.py	/^  import sys,os$/;"	i
sys	config/examples/arch-linux-gxx-complex.py	/^  import sys$/;"	i
sys	config/examples/arch-linux-mpich1.py	/^  import sys$/;"	i
sys	config/examples/arch-linux-pkgs-64idx.py	/^  import sys,os$/;"	i
sys	config/examples/arch-linux-pkgs-cxx-mlib.py	/^  import sys,os$/;"	i
sys	config/examples/arch-linux-pkgs-dbg-ftn-interfaces.py	/^  import sys,os$/;"	i
sys	config/examples/arch-linux-pkgs-gcov.py	/^  import sys,os$/;"	i
sys	config/examples/arch-linux-pkgs-opt-threadcomm.py	/^  import sys,os$/;"	i
sys	config/examples/arch-linux-pkgs-opt.py	/^  import sys,os$/;"	i
sys	config/examples/arch-linux-pkgs-threadcomm.py	/^  import sys,os$/;"	i
sys	config/examples/arch-linux-pkgs-valgrind.py	/^  import sys,os$/;"	i
sys	config/examples/arch-linux-uni.py	/^  import sys,os$/;"	i
sys	config/examples/arch-matlab-uni-mkl_ilp64.py	/^  import sys$/;"	i
sys	config/examples/arch-moab.py	/^  import sys$/;"	i
sys	config/examples/arch-mswin-borland.py	/^  import sys,os$/;"	i
sys	config/examples/arch-mswin-cuda.py	/^  import sys$/;"	i
sys	config/examples/arch-mswin-cxx-cmplx.py	/^  import sys,os$/;"	i
sys	config/examples/arch-mswin-gnu.py	/^  import sys,os$/;"	i
sys	config/examples/arch-mswin.py	/^  import sys,os$/;"	i
sys	config/examples/arch-opensolaris-cmplx-pkgs-dbg.py	/^  import sys,os$/;"	i
sys	config/examples/arch-opensolaris-misc.py	/^  import sys,os$/;"	i
sys	config/examples/arch-opensolaris-pkgs-opt.py	/^  import sys,os$/;"	i
sys	config/examples/arch-osx-10.6-cxx-cmplx-pkgs-dbg.py	/^  import sys,os$/;"	i
sys	config/examples/arch-osx-10.6-cxx-pkgs-opt.py	/^  import sys,os$/;"	i
sys	config/examples/arch-osx-10.6.py	/^  import sys,os$/;"	i
sys	config/examples/arch-viennacl.py	/^  import sys$/;"	i
sys	config/examples/asterix/asterix32-sun.py	/^  import sys,os$/;"	i
sys	config/examples/asterix/asterix32.py	/^  import sys,os$/;"	i
sys	config/examples/asterix/asterix64-c89.py	/^  import sys,os$/;"	i
sys	config/examples/asterix/asterix64-openmpi.py	/^  import sys,os$/;"	i
sys	config/examples/asterix/asterix64-sun.py	/^  import sys,os$/;"	i
sys	config/examples/asterix/asterix64.py	/^  import sys,os$/;"	i
sys	config/examples/basic/arch-gcc-complex-O.py	/^  import sys$/;"	i
sys	config/examples/basic/arch-gcc-complex.py	/^  import sys$/;"	i
sys	config/examples/basic/arch-gcc-real-O.py	/^  import sys$/;"	i
sys	config/examples/basic/arch-gcc-real.py	/^  import sys$/;"	i
sys	config/examples/basic/arch-gcc64-complex-O.py	/^  import sys$/;"	i
sys	config/examples/basic/arch-gcc64-complex.py	/^  import sys$/;"	i
sys	config/examples/basic/arch-gcc64-real-O.py	/^  import sys$/;"	i
sys	config/examples/basic/arch-gcc64-real.py	/^  import sys$/;"	i
sys	config/examples/basic/arch-gxx-complex-O.py	/^  import sys$/;"	i
sys	config/examples/basic/arch-gxx-complex.py	/^  import sys$/;"	i
sys	config/examples/basic/arch-gxx-real-O.py	/^  import sys$/;"	i
sys	config/examples/basic/arch-gxx-real.py	/^  import sys$/;"	i
sys	config/examples/basic/arch-gxx64-complex-O.py	/^  import sys$/;"	i
sys	config/examples/basic/arch-gxx64-complex.py	/^  import sys$/;"	i
sys	config/examples/basic/arch-gxx64-real-O.py	/^  import sys$/;"	i
sys	config/examples/basic/arch-gxx64-real.py	/^  import sys$/;"	i
sys	config/install.py	/^import re, os, sys, shutil$/;"	i
sys	src/dm/impls/mesh/examples/tests/memoryParse.py	/^  import sys$/;"	i
sys	src/dm/impls/mesh/examples/tests/memoryTests.py	/^import os, sys$/;"	i
sys	src/dm/impls/mesh/examples/tests/sieveTests.py	/^import os, sys$/;"	i
sysconfig	config/BuildSystem/RDict.py	/^    import distutils.sysconfig$/;"	i
sysconfig	config/BuildSystem/build/templates/usingPython.py	/^        import distutils.sysconfig$/;"	i
sysconfig	config/BuildSystem/build/templates/usingPython.py	/^    import distutils.sysconfig$/;"	i
sysconfig	config/BuildSystem/config/python.py	/^        import distutils.sysconfig$/;"	i
sysconfig	config/BuildSystem/config/python.py	/^    import distutils.sysconfig$/;"	i
sz	include/sieve/ALE_mem.hh	/^    int sz;$/;"	m	class:ALE::malloc_allocator
sz	include/sieve/ALE_mem.hh	/^    size_type sz;     \/\/ Size of underlying object (universal units) allocated with an allocator; indicates allocator use.$/;"	m	class:ALE::Obj
sz	include/sieve/ALE_mem.hh	/^    static typename Alloc::size_type sz;           \/\/ The size of T universal units of char$/;"	m	class:ALE::polymorphic_allocator
sz	include/sieve/ALE_mem.hh	/^  typename polymorphic_allocator<T>::size_type polymorphic_allocator<T>::sz =$/;"	m	class:ALE::polymorphic_allocator
t_activate	config/BuildSystem/build/framework.py	/^  def t_activate(self):$/;"	m	class:Framework
t_citool	config/BuildSystem/build/framework.py	/^  def t_citool(self):$/;"	m	class:Framework
t_compile	config/BuildSystem/build/framework.py	/^  def t_compile(self):$/;"	m	class:Framework
t_compilePrograms	config/BuildSystem/build/framework.py	/^  def t_compilePrograms(self):$/;"	m	class:Framework
t_configure	config/BuildSystem/build/framework.py	/^  def t_configure(self):$/;"	m	class:Framework
t_deactivate	config/BuildSystem/build/framework.py	/^  def t_deactivate(self):$/;"	m	class:Framework
t_default	config/BuildSystem/build/framework.py	/^  def t_default(self):$/;"	m	class:Framework
t_exportBabel	config/BuildSystem/build/framework.py	/^  def t_exportBabel(self):$/;"	m	class:Framework
t_getDependencies	config/BuildSystem/build/framework.py	/^  def t_getDependencies(self):$/;"	m	class:Framework
t_install	config/BuildSystem/build/framework.py	/^  def t_install(self):$/;"	m	class:Framework
t_makeStamp	config/BuildSystem/build/framework.py	/^  def t_makeStamp(self):$/;"	m	class:Framework
t_printSIDL	config/BuildSystem/build/framework.py	/^  def t_printSIDL(self):$/;"	m	class:Framework
t_printSIDLBabel	config/BuildSystem/build/framework.py	/^  def t_printSIDLBabel(self,exportDir):$/;"	m	class:Framework
t_printSIDLHTML	config/BuildSystem/build/framework.py	/^  def t_printSIDLHTML(self):$/;"	m	class:Framework
t_printTargets	config/BuildSystem/build/framework.py	/^  def t_printTargets(self):$/;"	m	class:Framework
t_pull	config/BuildSystem/build/framework.py	/^  def t_pull(self):$/;"	m	class:Framework
t_purge	config/BuildSystem/build/framework.py	/^  def t_purge(self):$/;"	m	class:Framework
t_push	config/BuildSystem/build/framework.py	/^  def t_push(self):$/;"	m	class:Framework
t_sidl	config/BuildSystem/build/framework.py	/^  def t_sidl(self):$/;"	m	class:Framework
t_sidlCheckpoint	config/BuildSystem/build/framework.py	/^  def t_sidlCheckpoint(self):$/;"	m	class:Framework
t_uninstall	config/BuildSystem/build/framework.py	/^  def t_uninstall(self):$/;"	m	class:Framework
t_update	config/BuildSystem/build/framework.py	/^  def t_update(self):$/;"	m	class:Framework
t_updateBootstrap	config/BuildSystem/build/framework.py	/^  def t_updateBootstrap(self):$/;"	m	class:Framework
t_updateBootstrap	config/BuildSystem/make.py	/^  def t_updateBootstrap(self):$/;"	m	class:Make
t_updateWebsite	config/BuildSystem/build/framework.py	/^  def t_updateWebsite(self):$/;"	m	class:Framework
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table	include/petscctable.h	/^  PetscInt *table;$/;"	m	struct:_n_PetscTable
tablesize	include/petsc-private/petscfptimpl.h	/^  PetscInt tablesize;$/;"	m	struct:_n_PetscFPT
tablesize	include/petscctable.h	/^  PetscInt tablesize;$/;"	m	struct:_n_PetscTable
tablevel	include/petsc-private/petscimpl.h	/^  PetscInt             tablevel;$/;"	m	struct:_p_PetscObject
tabulateTensor	include/sieve/FEMProblem.hh	/^      virtual void tabulateTensor(double * tensor, const double * coefficients = NULL) {$/;"	f	class:ALE::Problem::GeneralIntegral
tabulateTensor	include/sieve/UFCProblem.hh	/^      virtual void tabulateTensor(double * tensor, const double * coefficients = NULL) {$/;"	f	class:ALE::Problem::UFCCellIntegral
tag	include/petsc-private/petscimpl.h	/^  PetscMPIInt          tag;$/;"	m	struct:_p_PetscObject
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tagname	src/dm/impls/moab/examples/tests/ex1.cxx	/^  char tagname[PETSC_MAX_PATH_LEN];$/;"	m	class:AppCtx	file:
tagsize	src/dm/impls/moab/examples/tests/ex1.cxx	/^  PetscInt tagsize;$/;"	m	class:AppCtx	file:
tarfile	config/BuildSystem/retrieval.py	/^      import tarfile$/;"	i
tarfile	config/configure.py	/^import tarfile$/;"	i
target	include/sieve/ALE_containers.hh	/^    target_type target;$/;"	m	struct:ALE::Arrow
target	include/sieve/ALE_containers.hh	/^    target_type target;$/;"	m	struct:ALE::MinimalArrow
target	include/sieve/ISieve.hh	/^    const target_type target;$/;"	m	struct:ALE::SimpleArrow
target	include/sieve/LabelSifter.hh	/^          virtual const target_type& target() const {return this->_itor->target;};$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence::iterator
target	include/sieve/LabelSifter.hh	/^          virtual const target_type& target() const {return this->_itor->target;};$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence::reverse_iterator
target	include/sieve/LabelSifter.hh	/^      target_type target;$/;"	m	struct:ALE::NewSifterDef::Arrow
target	include/sieve/Sifter.hh	/^          virtual const target_type& target() const {return this->_itor->target;};$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence::iterator
target	include/sieve/Sifter.hh	/^          virtual const target_type& target() const {return this->_itor->target;};$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence::reverse_iterator
target	include/sieve/Sifter.hh	/^      target_type target;$/;"	m	struct:ALE::SifterDef::Arrow
target	src/dm/impls/mesh/examples/tests/ex00.c	/^struct target {};$/;"	s	file:
targetChanger	include/sieve/ALE_containers.hh	/^      targetChanger(const target_type& newTarget) : _newTarget(newTarget) {};$/;"	f	struct:ALE::Arrow::targetChanger
targetChanger	include/sieve/ALE_containers.hh	/^    struct targetChanger {$/;"	s	struct:ALE::Arrow
targetChanger	include/sieve/LabelSifter.hh	/^        targetChanger(const target_type& newTarget) : _newTarget(newTarget) {};$/;"	f	struct:ALE::NewSifterDef::Arrow::targetChanger
targetChanger	include/sieve/LabelSifter.hh	/^      struct targetChanger {$/;"	s	struct:ALE::NewSifterDef::Arrow
targetChanger	include/sieve/Sifter.hh	/^        targetChanger(const target_type& newTarget) : _newTarget(newTarget) {};$/;"	f	struct:ALE::SifterDef::Arrow::targetChanger
targetChanger	include/sieve/Sifter.hh	/^      struct targetChanger {$/;"	s	struct:ALE::SifterDef::Arrow
targetColorTag	include/sieve/Sifter.hh	/^      struct                                   targetColorTag{};$/;"	s	struct:ALE::SifterDef::ArrowContainerTraits
targetRec_type	include/sieve/Sieve.hh	/^        typedef typename baseType::traits::targetRec_type       targetRec_type;$/;"	t	struct:ALE::Sieve::__anon9
targetRec_type	include/sieve/Sifter.hh	/^      typedef typename base_container_type::traits::rec_type                         targetRec_type;$/;"	t	struct:ALE::ASifter::__anon2
targetSourceTag	include/sieve/LabelSifter.hh	/^      struct                                   targetSourceTag{};$/;"	s	struct:ALE::NewSifterDef::ArrowContainerTraits
target_type	include/sieve/ALE_containers.hh	/^    typedef Target_ target_type;$/;"	t	struct:ALE::Arrow
target_type	include/sieve/ALE_containers.hh	/^    typedef Target_ target_type;$/;"	t	struct:ALE::MinimalArrow
target_type	include/sieve/ISieve.hh	/^    typedef Target_ target_type;$/;"	t	struct:ALE::SimpleArrow
target_type	include/sieve/ISieve.hh	/^    typedef typename arrow_type::target_type   target_type;$/;"	t	class:ALE::IFSieve
target_type	include/sieve/LabelSifter.hh	/^      typedef Target_ target_type;$/;"	t	struct:ALE::NewSifterDef::Arrow
target_type	include/sieve/LabelSifter.hh	/^      typedef typename arrow_container_type::traits::target_type                     target_type;$/;"	t	struct:ALE::LabelSifter::__anon7
target_type	include/sieve/LabelSifter.hh	/^      typedef typename arrow_type::target_type target_type;$/;"	t	struct:ALE::NewSifterDef::ArrowContainerTraits
target_type	include/sieve/LabelSifter.hh	/^    typedef typename traits::target_type     target_type;$/;"	t	class:ALE::LabelSifter
target_type	include/sieve/Overlap.hh	/^  typedef point_type target_type;$/;"	t	class:PETSc::RecvOverlap
target_type	include/sieve/Overlap.hh	/^  typedef rank_type  target_type;$/;"	t	class:PETSc::SendOverlap
target_type	include/sieve/Sieve.hh	/^        typedef typename baseType::traits::target_type          target_type;$/;"	t	struct:ALE::Sieve::__anon9
target_type	include/sieve/Sifter.hh	/^      typedef Target_ target_type;$/;"	t	struct:ALE::SifterDef::Arrow
target_type	include/sieve/Sifter.hh	/^      typedef typename arrow_container_type::traits::target_type                     target_type;$/;"	t	struct:ALE::ASifter::__anon2
target_type	include/sieve/Sifter.hh	/^      typedef typename arrow_type::target_type target_type;$/;"	t	struct:ALE::SifterDef::ArrowContainerTraits
target_type	include/sieve/Sifter.hh	/^    typedef typename traits::target_type                                            target_type;$/;"	t	class:ALE::Sifter
tau_defs	bin/taucc.py	/^  tau_defs =''$/;"	v
tau_include	bin/taucc.py	/^  tau_include=''$/;"	v
tau_libs	bin/taucc.py	/^  tau_libs=''$/;"	v
tau_mpi_libs	bin/taucc.py	/^  tau_mpi_libs=''$/;"	v
tcomm	include/petsc-private/threadcommimpl.h	/^  PetscThreadComm               tcomm;          \/* The associated threadcomm *\/$/;"	m	struct:_p_PetscThreadCommRedCtx
tcomm	include/petsc-private/threadcommimpl.h	/^  PetscThreadComm   tcomm;                         \/* The thread communicator *\/$/;"	m	struct:_p_PetscThreadCommJobCtx
tdot	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*tdot)(Vec,Vec,PetscScalar*);             \/* x'*y *\/$/;"	m	struct:_VecOps
tdot_local	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*tdot_local)(Vec,Vec,PetscScalar*);$/;"	m	struct:_VecOps
tearDown	config/BuildSystem/config/regression/frameworkTest.py	/^  def tearDown(self):$/;"	m	class:FrameworkTest
tearDown	config/BuildSystem/config/regression/shellTest.py	/^  def tearDown(self):$/;"	m	class:ShellTest
tearDown	config/BuildSystem/regression/testCase.py	/^  def tearDown(self):$/;"	m	class:MPITest
tearDown	config/BuildSystem/regression/testCase.py	/^  def tearDown(self):$/;"	m	class:PETScTest
tearDown	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^  void tearDown(void) {};$/;"	f	class:FunctionTestDistribution
tearDown	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  void tearDown(void) {};$/;"	f	class:FunctionTestIDistribution
tearDown	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  void tearDown(void) {};$/;"	f	class:FunctionTestIMesh
tearDown	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  void tearDown(void) {};$/;"	f	class:MemoryTestIMesh
tearDown	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  void tearDown(void) {};$/;"	f	class:StressTestIMesh
tearDown	src/dm/impls/mesh/examples/tests/isection1.cxx	/^  void tearDown(void) {};$/;"	f	class:StressTestSection
tearDown	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void tearDown(void) {};$/;"	f	class:FunctionTestISieve
tearDown	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void tearDown(void) {};$/;"	f	class:MemoryTestISieve
tearDown	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void tearDown(void) {};$/;"	f	class:StressTestGeneralMeshSection
tearDown	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  void tearDown(void) {};$/;"	f	class:FunctionTestHatSieve
tearDown	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  void tearDown(void) {};$/;"	f	class:StressTestGeneralSieve
tearDown	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  void tearDown(void) {};$/;"	f	class:StressTestHatSieve
tearDown	src/dm/impls/mesh/examples/tests/sifter1.cxx	/^  void tearDown(void) {};$/;"	f	class:StressTestSifter
tearDown	src/dm/impls/mesh/examples/tests/stl1.cxx	/^  void tearDown(void) {};$/;"	f	class:MemoryTestSTL
tempfile	bin/taucc.py	/^import tempfile$/;"	i
tempfile	config/BuildSystem/build/framework.py	/^    import tempfile$/;"	i
tempfile	config/BuildSystem/build/processor.py	/^    import tempfile$/;"	i
tempfile	config/BuildSystem/config/framework.py	/^import tempfile$/;"	i
tempfile	config/builder.py	/^import tempfile$/;"	i
tempfile	config/cmakegen.py	/^  import tempfile, shutil$/;"	i
templates	config/BuildSystem/build/framework.py	/^      import build.templates.Compile$/;"	i
templates	config/BuildSystem/build/framework.py	/^      import build.templates.SIDL$/;"	i
templates	config/BuildSystem/build/templates/SIDL.py	/^      import build.templates.usingSIDL$/;"	i
templates	config/BuildSystem/build/templates/usingCxx.py	/^      import build.templates.usingC$/;"	i
templates	config/BuildSystem/build/templates/usingPython.py	/^      import build.templates.usingC$/;"	i
test	src/dm/impls/mesh/examples/tests/mesh1.cxx	/^  int        test;            \/\/ The testing level$/;"	m	struct:__anon4	file:
test1f90	src/dm/impls/mesh/examples/tests/ex5f90.F90	/^Program test1f90$/;"	p
test2f90	src/dm/impls/mesh/examples/tests/ex11f90.F90	/^Program test2f90$/;"	p
test2f90	src/dm/impls/mesh/examples/tests/ex7f90.F90	/^Program test2f90$/;"	p
test2f90	src/dm/impls/mesh/examples/tests/ex9f90.F90	/^Program test2f90$/;"	p
testArrowFilters	src/dm/impls/mesh/examples/tests/ex08.cxx	/^PetscErrorCode testArrowFilters()$/;"	f
testAuthorizedUrl	config/BuildSystem/retrieval.py	/^  def testAuthorizedUrl(self, authUrl):$/;"	m	class:Retriever
testBase	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testBase(void) {$/;"	f	class:FunctionTestISieve
testBiGraphDiv2	src/dm/impls/mesh/examples/tests/ex03.c	/^PetscErrorCode testBiGraphDiv2()$/;"	f
testClosure	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  void testClosure(void) {$/;"	f	class:StressTestIMesh
testClosure	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  void testClosure(void) {$/;"	f	class:StressTestGeneralSieve
testClosure	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  void testClosure(void) {$/;"	f	class:StressTestHatSieve
testCone	src/dm/impls/mesh/examples/tests/ex08.cxx	/^PetscErrorCode testCone()$/;"	f
testCone	src/dm/impls/mesh/examples/tests/sifter1.cxx	/^  void testCone(void) {$/;"	f	class:StressTestSifter
testConstantRestrictPoint	src/dm/impls/mesh/examples/tests/isection1.cxx	/^  void testConstantRestrictPoint(void) {$/;"	f	class:StressTestIConstantSection
testConstruction	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testConstruction(void) {$/;"	f	class:FunctionTestISieve
testConversion	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testConversion(void) {$/;"	f	class:FunctionTestISieve
testConversion	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testConversion(void) {$/;"	f	class:MemoryTestISieve
testCubicRestrict	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void testCubicRestrict(void) {$/;"	f	class:StressTestCubeMeshSection
testCubicRestrict	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void testCubicRestrict(void) {$/;"	f	class:StressTestSquareMeshSection
testCubicRestrictPrecomp	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void testCubicRestrictPrecomp(void) {$/;"	f	class:StressTestCubeMeshSection
testCubicRestrictPrecomp	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void testCubicRestrictPrecomp(void) {$/;"	f	class:StressTestSquareMeshSection
testDistributeLabel	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  void testDistributeLabel(void) {$/;"	f	class:FunctionTestIDistribution
testDistributeMesh2DUninterpolated	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^  void testDistributeMesh2DUninterpolated(void) {$/;"	f	class:FunctionTestDistribution
testDistributeMesh2DUninterpolated	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  void testDistributeMesh2DUninterpolated(void) {$/;"	f	class:FunctionTestIDistribution
testEmptyConfigure	config/BuildSystem/config/regression/frameworkTest.py	/^  def testEmptyConfigure(self):$/;"	m	class:FrameworkTest
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testHat	src/dm/impls/mesh/examples/tests/ex05.cxx	/^PetscErrorCode testHat(MPI_Comm comm) {$/;"	f
testHatFlip	src/dm/impls/mesh/examples/tests/ex06.cxx	/^PetscErrorCode testHatFlip() {$/;"	f
testJoin	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  void testJoin(void) {$/;"	f	class:FunctionTestHatSieve
testLabelAllocator	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  void testLabelAllocator(void) {$/;"	f	class:StressTestIMesh
testLinearRestrict	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void testLinearRestrict(void) {$/;"	f	class:StressTestCubeMeshSection
testLinearRestrict	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void testLinearRestrict(void) {$/;"	f	class:StressTestCubeMeshSectionNonInterp
testLinearRestrict	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void testLinearRestrict(void) {$/;"	f	class:StressTestSquareMeshSection
testLinearRestrictPrecomp	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void testLinearRestrictPrecomp(void) {$/;"	f	class:StressTestCubeMeshSection
testLinearRestrictPrecomp	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void testLinearRestrictPrecomp(void) {$/;"	f	class:StressTestCubeMeshSectionNonInterp
testLinearRestrictPrecomp	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void testLinearRestrictPrecomp(void) {$/;"	f	class:StressTestSquareMeshSection
testLogName	config/BuildSystem/config/regression/frameworkTest.py	/^  def testLogName(self):$/;"	m	class:FrameworkTest
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testNSRestrict	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void testNSRestrict(void) {$/;"	f	class:StressTestBigCubeMeshSection
testNSRestrict	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void testNSRestrict(void) {$/;"	f	class:StressTestBigSquareMeshSection
testNSRestrictPrecomp	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void testNSRestrictPrecomp(void) {$/;"	f	class:StressTestBigCubeMeshSection
testNSRestrictPrecomp	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void testNSRestrictPrecomp(void) {$/;"	f	class:StressTestBigSquareMeshSection
testNum	src/dm/impls/plex/examples/tests/ex7.c	/^  PetscInt  testNum;                      \/* Indicates the mesh to create *\/$/;"	m	struct:__anon1	file:
testOldDistributeMesh2DUninterpolated	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^  void testOldDistributeMesh2DUninterpolated(void) {$/;"	f	class:FunctionTestDistribution
testOldPreallocationMesh3DUninterpolated	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^  void testOldPreallocationMesh3DUninterpolated(void) {$/;"	f	class:FunctionTestDistribution
testOrder	config/BuildSystem/config/setsOrdered.py	/^        def testOrder(self):$/;"	m	class:.SetsTest
testOrdering	config/BuildSystem/config/setsOrdered.py	/^        def testOrdering(self):$/;"	m	class:.SetsTest
testOrientedClosure	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testOrientedClosure(const ALE::Obj<Mesh>& flexibleMesh, Renumbering& renumbering) {$/;"	f	class:FunctionTestISieve
testPCICE	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  void testPCICE(void) {$/;"	f	class:MemoryTestIMesh
testPointConeArraySequence	src/dm/impls/mesh/examples/tests/ex04.cxx	/^PetscErrorCode testPointConeArraySequence() {$/;"	f
testPreallocationMesh2DUninterpolated	src/dm/impls/mesh/examples/tests/distribution1.cxx	/^  void testPreallocationMesh2DUninterpolated(void) {$/;"	f	class:FunctionTestDistribution
testPreallocationMesh2DUninterpolated	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  void testPreallocationMesh2DUninterpolated(void) {$/;"	f	class:FunctionTestIDistribution
testPreallocationMesh3DUninterpolated	src/dm/impls/mesh/examples/tests/idistribution1.cxx	/^  void testPreallocationMesh3DUninterpolated(void) {$/;"	f	class:FunctionTestIDistribution
testRelabel	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  void testRelabel() {$/;"	f	class:FunctionTestIMesh
testRelabeling	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testRelabeling(sieve_type& copySieve) {$/;"	f	class:FunctionTestISieve
testReordering	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  void testReordering() {$/;"	f	class:FunctionTestIMesh
testRestrict	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void testRestrict(const std::string testName, const double maxTimePerRestrict) {$/;"	f	class:StressTestGeneralMeshSection
testRestrictPoint	src/dm/impls/mesh/examples/tests/isection1.cxx	/^  void testRestrictPoint(const std::string testName, const double maxTimePerRestrict) {$/;"	f	class:StressTestSection
testRestrictPrecomputed	src/dm/impls/mesh/examples/tests/section1.cxx	/^  void testRestrictPrecomputed(const std::string testName, const double maxTimePerRestrict) {$/;"	f	class:StressTestGeneralMeshSection
testSerialization	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  void testSerialization() {$/;"	f	class:FunctionTestIMesh
testSerialization	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testSerialization() {$/;"	f	class:FunctionTestISieve
testSerializationTetrahedral	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testSerializationTetrahedral(bool interpolate) {$/;"	f	class:FunctionTestISieve
testSerializationTetrahedralInterpolated	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testSerializationTetrahedralInterpolated() {$/;"	f	class:FunctionTestISieve
testSerializationTetrahedralUninterpolated	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testSerializationTetrahedralUninterpolated() {$/;"	f	class:FunctionTestISieve
testSerializationTriangular	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testSerializationTriangular(bool interpolate) {$/;"	f	class:FunctionTestISieve
testSerializationTriangularInterpolated	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testSerializationTriangularInterpolated() {$/;"	f	class:FunctionTestISieve
testSerializationTriangularUninterpolated	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testSerializationTriangularUninterpolated() {$/;"	f	class:FunctionTestISieve
testSet	src/dm/impls/mesh/examples/tests/stl1.cxx	/^  void testSet(void) {$/;"	f	class:MemoryTestSTL
testSkewedHat	src/dm/impls/mesh/examples/tests/ex05.cxx	/^PetscErrorCode testSkewedHat(MPI_Comm comm) {$/;"	f
testSkewedHatFlip	src/dm/impls/mesh/examples/tests/ex05.cxx	/^PetscErrorCode testSkewedHatFlip(MPI_Comm comm) {$/;"	f
testStar	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  void testStar(void) {$/;"	f	class:StressTestGeneralSieve
testStar	src/dm/impls/mesh/examples/tests/sieve1.cxx	/^  void testStar(void) {$/;"	f	class:StressTestHatSieve
testStratify	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  void testStratify() {$/;"	f	class:FunctionTestIMesh
testStratifyLine	src/dm/impls/mesh/examples/tests/imesh1.cxx	/^  void testStratifyLine() {$/;"	f	class:FunctionTestIMesh
testSupport	src/dm/impls/mesh/examples/tests/sifter1.cxx	/^  void testSupport(void) {$/;"	f	class:StressTestSifter
testTetrahedralInterpolatedOrientedClosure	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testTetrahedralInterpolatedOrientedClosure() {$/;"	f	class:FunctionTestISieve
testTetrahedralInterpolatedRelabeling	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testTetrahedralInterpolatedRelabeling() {$/;"	f	class:FunctionTestISieve
testTetrahedralOrientedClosure	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testTetrahedralOrientedClosure(bool interpolate) {$/;"	f	class:FunctionTestISieve
testTetrahedralRelabeling	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testTetrahedralRelabeling(bool interpolate) {$/;"	f	class:FunctionTestISieve
testTetrahedralUninterpolatedOrientedClosure	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testTetrahedralUninterpolatedOrientedClosure() {$/;"	f	class:FunctionTestISieve
testTetrahedralUninterpolatedRelabeling	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testTetrahedralUninterpolatedRelabeling() {$/;"	f	class:FunctionTestISieve
testTimeout	config/BuildSystem/config/regression/shellTest.py	/^  def testTimeout(self):$/;"	m	class:ShellTest
testTriangularInterpolatedOrientedClosure	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testTriangularInterpolatedOrientedClosure() {$/;"	f	class:FunctionTestISieve
testTriangularInterpolatedSieve	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testTriangularInterpolatedSieve(void) {$/;"	f	class:MemoryTestISieve
testTriangularOrientedClosure	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testTriangularOrientedClosure(bool interpolate) {$/;"	f	class:FunctionTestISieve
testTriangularUninterpolatedOrientedClosure	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testTriangularUninterpolatedOrientedClosure() {$/;"	f	class:FunctionTestISieve
testTriangularUninterpolatedSieve	src/dm/impls/mesh/examples/tests/isieve1.cxx	/^  void testTriangularUninterpolatedSieve(void) {$/;"	f	class:MemoryTestISieve
testUniformRestrictPoint	src/dm/impls/mesh/examples/tests/isection1.cxx	/^  void testUniformRestrictPoint(void) {$/;"	f	class:StressTestIUniformSection
testUniqueness	config/BuildSystem/config/setsOrdered.py	/^        def testUniqueness(self):$/;"	m	class:.SetsTest
testWindowedArrowContainer	src/dm/impls/mesh/examples/tests/ex07.cxx	/^PetscErrorCode testWindowedArrowContainer()$/;"	f
test_ISRead	bin/pythonscripts/PetscBinaryIO_tests.py	/^    def test_ISRead(self):$/;"	m	class:TestPetscBinaryIO
test_MatRead	bin/pythonscripts/PetscBinaryIO_tests.py	/^    def test_MatRead(self):$/;"	m	class:TestPetscBinaryIO
test_MatWrite	bin/pythonscripts/PetscBinaryIO_tests.py	/^    def test_MatWrite(self):$/;"	m	class:TestPetscBinaryIO
test_VecRead	bin/pythonscripts/PetscBinaryIO_tests.py	/^    def test_VecRead(self):$/;"	m	class:TestPetscBinaryIO
test_VecWrite	bin/pythonscripts/PetscBinaryIO_tests.py	/^    def test_VecWrite(self):$/;"	m	class:TestPetscBinaryIO
test_options	config/examples/arch-bgp-ibm-opt.py	/^test_options = []$/;"	v
text	bin/TOPSGenerator.py	/^            text = text.replace('begin('+app+'.System.Jacobian)','begin('+app+'.System.Jacobian)\\n'+bscode)$/;"	v
text	bin/TOPSGenerator.py	/^          text = text.replace('begin('+app+'.System.computeMatrix)','begin('+app+'.System.computeMatrix)\\n'+bscode)$/;"	v
text	bin/TOPSGenerator.py	/^          text = text.replace('begin('+app+'.System.computeResidual)','begin('+app+'.System.computeResidual)\\n'+bscode)$/;"	v
text	bin/TOPSGenerator.py	/^          text = text.replace('begin('+app+'.System.computeRightHandSide)','begin('+app+'.System.computeRightHandSide)\\n'+bscode)$/;"	v
text	bin/TOPSGenerator.py	/^          text = text.replace('begin('+app+'.System.initalGuess)','begin('+app+'.System.initialGuess)\\n'+bscode)$/;"	v
text	bin/TOPSGenerator.py	/^          text = text.replace('begin('+app+'.System.initializeOnce)','begin('+app+'.System.initializeOnce)\\n'+bscode)$/;"	v
text	bin/TOPSGenerator.py	/^        text = f.read()$/;"	v
text	bin/TOPSGenerator.py	/^        text = text.replace('begin('+app+'.System._implementation)','begin('+app+'.System._implementation)\\n'+bscode)$/;"	v
text	bin/TOPSGenerator.py	/^        text = text.replace('begin('+app+'.System._includes)','begin('+app+'.System._includes)\\n'+bscode)$/;"	v
text	bin/TOPSGenerator.py	/^        text = text.replace('begin('+app+'.System.go)','begin('+app+'.System.go)\\n'+bscode)$/;"	v
text	bin/TOPSGenerator.py	/^        text = text.replace('begin('+app+'.System.setServices)','begin('+app+'.System.setServices)\\n'+bscode)$/;"	v
text	bin/TOPSGenerator.py	/^        text = text.replace('begin('+app+'.System.setSolver)','begin('+app+'.System.setSolver)\\n'+bscode)$/;"	v
text	include/petscoptions.h	/^  char              *text;$/;"	m	struct:_n_PetscOptions
textbox	bin/TOPSInstaller.py	/^def textbox(message="", title="", text="", codebox=0):$/;"	f
textboxlistener	include/web/AMSSnoopObjects.py	/^    def textboxlistener(self,arg):$/;"	m	class:AMSSnoopObjects
this	config/BuildSystem/RDict.py	/^    import RDict # Need this to locate server script$/;"	i
thisNode	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^  ALE::Mesh::point_type thisNode;    \/\/the currently enqueued node.$/;"	m	struct:ALE::Hierarchy::bound_trav
thisNode	src/dm/impls/mesh/examples/tutorials/id_bound.h	/^  ALE::Mesh::point_type thisNode;      \/\/the currently enqueued node.$/;"	m	struct:ALE::Coarsener::bound_trav
this_type	include/sieve/ISieve.hh	/^    typedef IFSieve<Point_,Allocator_>         this_type;$/;"	t	class:ALE::IFSieve
this_type	include/sieve/Mesh.hh	/^    typedef Bundle<Sieve_,RealSection_,IntSection_,ArrowSection_>     this_type;$/;"	t	class:ALE::Bundle
this_type	include/sieve/Mesh.hh	/^    typedef IBundle<Sieve_,RealSection_,IntSection_,Label_,ArrowSection_> this_type;$/;"	t	class:ALE::IBundle
thread_ctr	include/petsc-private/threadcommimpl.h	/^  PetscInt              *thread_ctr;                        \/* Reduction counter for each thread *\/$/;"	m	struct:_p_PetscThreadCommReduction
thread_status	include/petsc-private/threadcommimpl.h	/^  PetscInt                      *thread_status; \/* Reduction status of each thread *\/$/;"	m	struct:_p_PetscThreadCommRedCtx
threading	config/BuildSystem/RDict.py	/^      import threading$/;"	i
threading	config/BuildSystem/script.py	/^        import threading$/;"	i
threshold	include/petsc-private/snesimpl.h	/^  PetscReal threshold;           \/* threshold for imposing safeguard *\/$/;"	m	struct:__anon5
time	bin/petscnagupgrade.py	/^import os.path, time,sys$/;"	i
time	config/BuildSystem/RDict.py	/^            import time$/;"	i
time	config/BuildSystem/RDict.py	/^        import time$/;"	i
time	config/BuildSystem/RDict.py	/^    import time$/;"	i
time	config/BuildSystem/config/base.py	/^    import time$/;"	i
time	config/BuildSystem/config/base.py	/^import time$/;"	i
time	config/BuildSystem/config/framework.py	/^    import time, sys$/;"	i
time	config/BuildSystem/config/framework.py	/^import time$/;"	i
time	config/BuildSystem/maker.py	/^    import time$/;"	i
time	config/BuildSystem/sourceDatabase.py	/^import time$/;"	i
time	config/PETSc/Configure.py	/^    import time$/;"	i
time	config/PETSc/utilities/debuggers.py	/^          import time$/;"	i
time	include/petsc-private/logimpl.h	/^  PetscLogDouble time;          \/* The time of occurence *\/$/;"	m	struct:_Action
time	include/petsc-private/petscimpl.h	/^  PetscLogDouble       flops,time,mem;$/;"	m	struct:_p_PetscObject
time	include/petsc-private/tsimpl.h	/^    PetscReal time;             \/* The time at which the matrices were last evaluated *\/$/;"	m	struct:_p_TS::__anon6
time	include/petsc-private/tsimpl.h	/^    PetscReal time;             \/* The time at which the matrices were last evaluated *\/$/;"	m	struct:_p_TS::__anon7
time	include/petsclog.h	/^  PetscLogDouble time, time2, timeTmp;   \/* The time and time^2 taken for this event *\/$/;"	m	struct:__anon65
time	include/petsclog.hh	/^    PetscLogDouble time() {$/;"	f	class:PETSc::LogEvent
time2	include/petsclog.h	/^  PetscLogDouble time, time2, timeTmp;   \/* The time and time^2 taken for this event *\/$/;"	m	struct:__anon65
timeTmp	include/petsclog.h	/^  PetscLogDouble time, time2, timeTmp;   \/* The time and time^2 taken for this event *\/$/;"	m	struct:__anon65
time_step	include/petsc-private/tsimpl.h	/^  PetscReal time_step;              \/* current\/completed time increment *\/$/;"	m	struct:_p_TS
time_step_orig	include/petsc-private/tsimpl.h	/^  PetscReal time_step_orig;            \/* original time step requested by user *\/$/;"	m	struct:_p_TS
time_step_prev	include/petsc-private/tsimpl.h	/^  PetscReal time_step_prev;         \/* previous time step  *\/$/;"	m	struct:_p_TS
time_steps_since_decrease	include/petsc-private/tsimpl.h	/^  PetscInt  time_steps_since_decrease; \/* number of timesteps since timestep was decreased due to lack of convergence *\/$/;"	m	struct:_p_TS
tiny_size	src/dm/impls/mesh/examples/tests/options0.cxx	/^struct tiny_size$/;"	s	file:
tiny_size	src/dm/impls/mesh/examples/tests/options0.hh	/^struct tiny_size$/;"	s
title	bin/TOPSGenerator.py	/^        title = "TOPS Code Generator"$/;"	v
title	bin/TOPSInstaller.py	/^			title = "Demo of diropenbox"$/;"	v
title	bin/TOPSInstaller.py	/^			title = reply[0]$/;"	v
title	bin/TOPSInstaller.py	/^        title = "TOPS Software Installer"$/;"	v
title	config/BuildSystem/help.py	/^  title = property(getTitle, setTitle, None, 'Title of the Information Menu')$/;"	v	class:Info
title	include/petsc-private/drawimpl.h	/^  char            *title;$/;"	m	struct:_p_PetscDraw
title	include/petscoptions.h	/^  char             *title;$/;"	m	struct:__anon35
tkFileDialog	bin/TOPSInstaller.py	/^import tkFileDialog$/;"	i
tmpDir	config/BuildSystem/config/base.py	/^  tmpDir = property(getTmpDir, setTmpDir, doc = 'Temporary directory for test byproducts')$/;"	v	class:Configure
tmpDir	config/BuildSystem/config/framework.py	/^  tmpDir = property(getTmpDir, setTmpDir, doc = 'Temporary directory for test byproducts')$/;"	v	class:Framework
tn	include/petscdmmesh_formats.hh	/^      ALE::Mesh<PetscInt,PetscScalar>::real_section_type::value_type tn;$/;"	m	struct:ALE::PCICE::__anon9
tn	include/petscdmmesh_formats.hh	/^      ALE::Mesh<PetscInt,PetscScalar>::real_section_type::value_type tn;$/;"	m	struct:ALE::PFLOTRAN::__anon10
to	config/BuildSystem/RDict.py	/^    import RDict # Need this to locate server script$/;"	i
to	config/BuildSystem/RDict.py	/^  import build.buildGraph # This is necessary for us to create BuildGraph objects on load$/;"	i
to	config/BuildSystem/RDict.py	/^  import project          # This is necessary for us to create Project objects on load$/;"	i
toString	config/BuildSystem/config/headers.py	/^  def toString(self,includes):$/;"	m	class:Configure
toString	config/BuildSystem/config/libraries.py	/^  def toString(self,libs):$/;"	m	class:Configure
toStringNoDupes	config/BuildSystem/config/headers.py	/^  def toStringNoDupes(self,includes,modincludes=[]):$/;"	m	class:Configure
toStringNoDupes	config/BuildSystem/config/libraries.py	/^  def toStringNoDupes(self,libs):$/;"	m	class:Configure
to_n	include/petsc-private/vecimpl.h	/^  PetscInt       to_n,from_n;$/;"	m	struct:_p_VecScatter
todata	include/petsc-private/vecimpl.h	/^  void           *fromdata,*todata;$/;"	m	struct:_p_VecScatter
togeneral	include/petsc-private/isimpl.h	/^  PetscErrorCode (*togeneral)(IS);$/;"	m	struct:_ISOps
together	include/finclude/petscmat.h	/^!  MatSorType may be bitwise ORd together, so do not change the numbers$/;"	v
tolerancesset	include/petsc-private/snesimpl.h	/^  PetscBool   tolerancesset;      \/* SNESSetTolerances() called and tolerances should persist through SNESCreate_XXX()*\/$/;"	m	struct:_p_SNES
top	include/petsc-private/logimpl.h	/^  int  top;   \/* The top of the stack *\/$/;"	m	struct:_n_PetscIntStack
topologicalSort	config/BuildSystem/build/buildGraph.py	/^  def topologicalSort(graph, start = None):$/;"	m	class:BuildGraph
topologicalSort	config/BuildSystem/build/buildGraph.py	/^  topologicalSort = staticmethod(topologicalSort)$/;"	v	class:BuildGraph
topologicalSort	config/BuildSystem/graph.py	/^  def topologicalSort(graph, start = None, outEdges = 1):$/;"	m	class:DirectedGraph
topologicalSort	config/BuildSystem/graph.py	/^  topologicalSort = staticmethod(topologicalSort)$/;"	v	class:DirectedGraph
topologicalSort	config/builder.py	/^  def topologicalSort(self, predicate):$/;"	m	class:SourceDatabase
topology	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^Obj<topology_type>                   topology;$/;"	m	class:ALE::Hierarchy::HierarchyBuilder
topology_type	include/sieve/Completion.hh	/^      typedef typename ALE::Topology<int, dsieve_type, alloc_type>                        topology_type;$/;"	t	class:ALE::New::Completion
topology_type	include/sieve/SectionCompletion.hh	/^      typedef typename ALE::Topology<int, dsieve_type, alloc_type>                             topology_type;$/;"	t	class:ALE::New::SectionCompletion
topology_type	src/dm/impls/mesh/examples/tests/overlap2.cxx	/^typedef ALE::Test::OverlapTest::topology_type     topology_type;$/;"	t	file:
topology_type	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^      typedef ALE::New::Topology<int, sieve_type>                                   topology_type;$/;"	t	class:ALE::Test::OverlapTest
topology_type	src/dm/impls/mesh/examples/tests/section1-old.cxx	/^typedef ALE::Test::topology_type         topology_type;$/;"	t	file:
topology_type	src/dm/impls/mesh/examples/tests/sieve2-old.cxx	/^typedef ALE::Test::OverlapTest::topology_type                     topology_type;$/;"	t	file:
topology_type	src/dm/impls/mesh/examples/tests/sieveTest.hh	/^      typedef Topology_                          topology_type;$/;"	t	class:ALE::Test::TopologyBuilder
topology_type	src/dm/impls/mesh/examples/tests/topology1.cxx	/^typedef ALE::Test::topology_type  topology_type;$/;"	t	file:
topology_type	src/dm/impls/mesh/examples/tutorials/Hierarchy.h	/^typedef ALE::Mesh::topology_type                        topology_type;$/;"	t	namespace:ALE::Hierarchy
total	include/petsc-private/isimpl.h	/^  PetscInt     *total, *nonlocal;   \/* local representation of ALL indices across the comm as well as the nonlocal part. *\/$/;"	m	struct:_p_IS
total	include/sieve/ALE_mem.hh	/^      long long total;$/;"	m	struct:ALE::MemoryLogger::Log
total_space_size	include/petsc-private/matimpl.h	/^  PetscInt           total_space_size;$/;"	m	struct:_MatStashSpace
traceback	config/BuildSystem/RDict.py	/^    import traceback$/;"	i
traceback	config/BuildSystem/build/framework.py	/^        import traceback$/;"	i
traceback	config/BuildSystem/build/framework.py	/^      import traceback$/;"	i
traceback	config/BuildSystem/config/setCompilers.py	/^        import sys,traceback$/;"	i
traceback	config/BuildSystem/logger.py	/^    import traceback$/;"	i
traceback	config/BuildSystem/maker.py	/^      import sys, traceback$/;"	i
traceback	config/BuildSystem/sourceDatabase.py	/^    import traceback$/;"	i
traceback	config/configure.py	/^      import traceback$/;"	i
traceback	config/configure.py	/^    import traceback$/;"	i
traits	include/sieve/LabelSifter.hh	/^        typedef ReversibleIndexSequenceTraits<Index_, ValueExtractor_>  traits;$/;"	t	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
traits	include/sieve/LabelSifter.hh	/^        typedef typename base_type::traits traits;$/;"	t	struct:ALE::LabelSifter::__anon7::coneSequence
traits	include/sieve/LabelSifter.hh	/^        typedef typename base_type::traits traits;$/;"	t	struct:ALE::LabelSifter::__anon7::supportSequence
traits	include/sieve/LabelSifter.hh	/^      typedef ArrowContainerTraits<Source_, Target_> traits;$/;"	t	struct:ALE::NewSifterDef::ArrowContainer
traits	include/sieve/LabelSifter.hh	/^    } traits;$/;"	t	class:ALE::LabelSifter	typeref:struct:ALE::LabelSifter::__anon7
traits	include/sieve/Sieve.hh	/^       traits;$/;"	t	class:ALE::SieveDef::RecContainerTraits::PointSequence
traits	include/sieve/Sieve.hh	/^       traits;$/;"	t	class:ALE::SieveDef::RecContainerTraits::TwoValueSequence
traits	include/sieve/Sieve.hh	/^       traits;$/;"	t	class:ALE::SieveDef::RecContainerTraits::ValueSequence
traits	include/sieve/Sieve.hh	/^      typedef RecContainerTraits<Point_, Rec_> traits;$/;"	t	struct:ALE::SieveDef::RecContainer
traits	include/sieve/Sieve.hh	/^      } traits;$/;"	t	class:ALE::Sieve	typeref:struct:ALE::Sieve::__anon9
traits	include/sieve/Sifter.hh	/^        traits;$/;"	t	class:ALE::SifterDef::RecContainerTraits::PointSequence
traits	include/sieve/Sifter.hh	/^        typedef ReversibleIndexSequenceTraits<Index_, ValueExtractor_>  traits;$/;"	t	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
traits	include/sieve/Sifter.hh	/^        typedef typename base_type::traits traits;$/;"	t	struct:ALE::ASifter::__anon2::coneSequence
traits	include/sieve/Sifter.hh	/^        typedef typename base_type::traits traits;$/;"	t	struct:ALE::ASifter::__anon2::supportSequence
traits	include/sieve/Sifter.hh	/^      typedef ArrowContainerTraits<Source_, Target_, Color_, SupportCompare_>      traits;$/;"	t	struct:ALE::SifterDef::ArrowContainer
traits	include/sieve/Sifter.hh	/^      typedef ArrowContainerTraits<Source_, Target_, Color_, SupportCompare_> traits;$/;"	t	struct:ALE::SifterDef::ArrowContainer
traits	include/sieve/Sifter.hh	/^      typedef RecContainerTraits<Point_, Rec_> traits;$/;"	t	struct:ALE::SifterDef::RecContainer
traits	include/sieve/Sifter.hh	/^      typedef typename ASifter<Source_, Target_, Color_, SifterDef::uniColor, SupportCompare_, SourceCtnr_, TargetCtnr_>::traits       traits;$/;"	t	class:ALE::Sifter
traits	include/sieve/Sifter.hh	/^    } traits;$/;"	t	class:ALE::ASifter	typeref:struct:ALE::ASifter::__anon2
transcoloringapplydentosp	include/petsc-private/matimpl.h	/^  PetscErrorCode (*transcoloringapplydentosp)(MatTransposeColoring,Mat,Mat);$/;"	m	struct:_MatOps
transcoloringapplysptoden	include/petsc-private/matimpl.h	/^  PetscErrorCode (*transcoloringapplysptoden)(MatTransposeColoring,Mat,Mat);$/;"	m	struct:_MatOps
transform	bin/processSummary.py	/^  def transform(self, line):$/;"	m	class:LogSummarizer
transform	config/BuildSystem/build/bk.py	/^import build.transform$/;"	i
transform	config/BuildSystem/build/fileState.py	/^import build.transform$/;"	i
transform	config/BuildSystem/build/processor.py	/^import build.transform$/;"	i
transform	config/BuildSystem/build/templates/usingCxx.py	/^import build.transform$/;"	i
transform	config/BuildSystem/build/templates/usingPython.py	/^import build.transform$/;"	i
transforms	bin/processSummary.py	/^  transforms = [$/;"	v	class:LogSummarizer
transpose	include/petsc-private/matimpl.h	/^  PetscErrorCode (*transpose)(Mat,MatReuse,Mat *);$/;"	m	struct:_MatOps
transpose_solve	include/petsc-private/kspimpl.h	/^  PetscBool      transpose_solve;    \/* solve transpose system instead *\/$/;"	m	struct:_p_KSP
transposecoloringcreate	include/petsc-private/matimpl.h	/^  PetscErrorCode (*transposecoloringcreate)(Mat,ISColoring,MatTransposeColoring);$/;"	m	struct:_MatOps
transposematmult	include/petsc-private/matimpl.h	/^  PetscErrorCode (*transposematmult)(Mat,Mat,MatReuse,PetscReal,Mat*);$/;"	m	struct:_MatOps
transposematmultnumeric	include/petsc-private/matimpl.h	/^  PetscErrorCode (*transposematmultnumeric)(Mat,Mat,Mat);$/;"	m	struct:_MatOps
transposematmultsymbolic	include/petsc-private/matimpl.h	/^  PetscErrorCode (*transposematmultsymbolic)(Mat,Mat,PetscReal,Mat*);$/;"	m	struct:_MatOps
triangle	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*triangle)(PetscDraw,PetscReal,PetscReal,PetscReal,PetscReal,PetscReal,PetscReal,int,int,int);$/;"	m	struct:_PetscDrawOps
trstarts	include/petscis.h	/^  PetscInt               *trstarts;   \/* local start for each thread *\/$/;"	m	struct:_n_PetscLayout
truediagonal	include/petsc-private/kspimpl.h	/^  Vec          truediagonal;$/;"	m	struct:_p_KSP
ttol	include/petsc-private/kspimpl.h	/^                  ttol,                     \/* (not set by user)  *\/$/;"	m	struct:_p_KSP
ttol	include/petsc-private/snesimpl.h	/^  PetscReal   ttol;           \/* used by default convergence test routine *\/$/;"	m	struct:_p_SNES
type	include/petsc-private/petscimpl.h	/^  PetscInt             type;$/;"	m	struct:_p_PetscObject
type	include/petsc-private/threadcommimpl.h	/^  PetscDataType                 type;           \/* The reduction data type *\/$/;"	m	struct:_p_PetscThreadCommRedCtx
type	include/petsc-private/threadcommimpl.h	/^  char                    type[256];    \/* Thread model type *\/$/;"	m	struct:_p_PetscThreadComm
type	include/petsc-private/vecimpl.h	/^  VecScatterType         type;$/;"	m	struct:__anon29
type	include/petsc-private/vecimpl.h	/^  VecScatterType type;$/;"	m	struct:__anon26
type	include/petsc-private/vecimpl.h	/^  VecScatterType type;$/;"	m	struct:__anon27
type	include/petsc-private/vecimpl.h	/^  VecScatterType type;$/;"	m	struct:__anon28
type	include/petscoptions.h	/^  PetscOptionType   type;$/;"	m	struct:_n_PetscOptions
type	include/sieve/ALE_containers.hh	/^      typedef Arrow<OtherSource_, OtherTarget_, OtherColor_> type;$/;"	t	struct:ALE::Arrow::rebind
type	include/sieve/ALE_containers.hh	/^      typedef Arrow<target_type, source_type, color_type> type;$/;"	t	struct:ALE::Arrow::flip
type	include/sieve/LabelSifter.hh	/^        typedef Arrow<OtherSource_, OtherTarget_> type;$/;"	t	struct:ALE::NewSifterDef::Arrow::rebind
type	include/sieve/LabelSifter.hh	/^        typedef Arrow<target_type, source_type> type;$/;"	t	struct:ALE::NewSifterDef::Arrow::flip
type	include/sieve/LabelSifter.hh	/^      typedef LabelSifter<OtherSource_, OtherTarget_> type;$/;"	t	struct:ALE::LabelSifter::rebind
type	include/sieve/Sieve.hh	/^        typedef Rec<OtherPoint_, OtherMarker_> type;$/;"	t	struct:ALE::SieveDef::Rec::rebind
type	include/sieve/Sieve.hh	/^        typedef RecContainer<OtherPoint_, OtherRec_> type;$/;"	t	struct:ALE::SieveDef::RecContainer::rebind
type	include/sieve/Sifter.hh	/^        typedef Arrow<OtherSource_, OtherTarget_, OtherColor_> type;$/;"	t	struct:ALE::SifterDef::Arrow::rebind
type	include/sieve/Sifter.hh	/^        typedef Arrow<target_type, source_type, color_type> type;$/;"	t	struct:ALE::SifterDef::Arrow::flip
type	include/sieve/Sifter.hh	/^        typedef Rec<OtherPoint_> type;$/;"	t	struct:ALE::SifterDef::Rec::rebind
type	include/sieve/Sifter.hh	/^        typedef RecContainer<OtherPoint_, OtherRec_> type;$/;"	t	struct:ALE::SifterDef::RecContainer::rebind
type	include/sieve/Sifter.hh	/^      typedef ASifter<OtherSource_, OtherTarget_, OtherColor_, otherColorMultiplicity, OtherSupportCompare_, OtherSourceCtnr_, OtherTargetCtnr_> type;$/;"	t	struct:ALE::ASifter::rebind
type	include/sieve/Sifter.hh	/^      typedef Sifter<OtherSource_, OtherTarget_, OtherColor_, OtherSupportCompare_, OtherSourceCtnr_, OtherTargetCtnr_> type;$/;"	t	struct:ALE::Sifter::rebind
type_name	include/petsc-private/petscimpl.h	/^  char                 *type_name;     \/*  this is the subclass, for example VECSEQ which equals "seq" *\/$/;"	m	struct:_p_PetscObject
types	bin/pythonscripts/PetscBinaryIO.py	/^import types$/;"	i
types	config/BuildSystem/RDict.py	/^  def types(self):$/;"	m	class:RDict
types	include/petsc-private/vecimpl.h	/^  MPI_Datatype           *types;$/;"	m	struct:__anon29
u	include/petsc-private/characteristicimpl.h	/^  PassiveScalar u, v; \/* Velocity of a point on the characteristic *\/$/;"	m	struct:_p_Item
u	include/petscdmplex.h	/^  Vec   u; \/* The base vector for the Jacbobian action J(u) x *\/$/;"	m	struct:__anon36
ufc_simplex	config/BuildSystem/config/packages/fiat.py	/^        from FIAT import ufc_simplex$/;"	i
umax	include/petsc-private/matimpl.h	/^  PetscInt      umax;                   \/* user specified max-size *\/$/;"	m	struct:__anon1
umax	include/petsc-private/vecimpl.h	/^  PetscInt      umax;                   \/* max stash size user wants *\/$/;"	m	struct:__anon24
umin	include/petsc-private/matimpl.h	/^  PetscReal      umin;             \/* minimum allowable u'dx value *\/$/;"	m	struct:_p_MatFDColoring
uncompress	bin/urlget.py	/^def uncompress(filename):$/;"	f
unexpected	config/cmakegen.py	/^  def unexpected():$/;"	f	function:cmakeconditional
uniColor	include/sieve/Sifter.hh	/^    typedef enum {multiColor, uniColor} ColorMultiplicity;$/;"	e	enum:ALE::SifterDef::__anon1
unified_diff	config/builder.py	/^   from difflib import unified_diff$/;"	i
uniform_section_type	src/dm/impls/mesh/examples/tests/section1-old.cxx	/^typedef ALE::Test::uniform_section_type  uniform_section_type;$/;"	t	file:
uniform_section_type	src/dm/impls/mesh/examples/tests/sectionTest.hh	/^    typedef ALE::UniformSection<sieve_type, int, 2>  uniform_section_type;$/;"	t	namespace:ALE::Test
unifyBundle	include/sieve/Distribution.hh	/^    static void unifyBundle(const Obj<bundle_type>& bundle, const int dim, const Obj<bundle_type>& bundleNew, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap) {$/;"	f	class:ALE::Distribution
unifyMesh	include/sieve/Distribution.hh	/^    static Obj<ALE::Mesh<PetscInt,PetscScalar> > unifyMesh(const Obj<ALE::Mesh<PetscInt,PetscScalar> >& parallelMesh) {$/;"	f	class:ALE::Distribution
unifyMesh	include/sieve/Distribution.hh	/^    static Obj<Mesh> unifyMesh(const Obj<Mesh>& mesh) {$/;"	f	class:ALE::DistributionNew
unifyMesh	include/sieve/Distribution.hh	/^    static Obj<partition_type> unifyMesh(const Obj<Mesh>& mesh, const Obj<NewMesh>& newMesh, Renumbering& renumbering, const Obj<SendOverlap>& sendMeshOverlap, const Obj<RecvOverlap>& recvMeshOverlap) {$/;"	f	class:ALE::DistributionNew
union	config/BuildSystem/config/setsBackport.py	/^    def union(self, other):$/;"	m	class:BaseSet
union	config/BuildSystem/config/setsOrdered.py	/^    def union(self, other):$/;"	m	class:BaseSet
union_update	config/BuildSystem/config/setsBackport.py	/^    def union_update(self, other):$/;"	m	class:Set
union_update	config/BuildSystem/config/setsOrdered.py	/^    def union_update(self, other):$/;"	m	class:Set
uniqextend	config/PETSc/Configure.py	/^    def uniqextend(lst,new):$/;"	f	function:Configure.dumpCMakeConfig
unique	include/sieve/ISieve.hh	/^      const bool           unique;$/;"	m	class:ALE::ISieveVisitor::PointRetriever
unittest	bin/pythonscripts/PetscBinaryIO_tests.py	/^import unittest$/;"	i
unittest	config/BuildSystem/config/regression/frameworkTest.py	/^import unittest$/;"	i
unittest	config/BuildSystem/config/regression/shellTest.py	/^import unittest$/;"	i
unittest	config/BuildSystem/config/setsOrdered.py	/^    import unittest$/;"	i
unittest	config/BuildSystem/regression/testCase.py	/^import unittest$/;"	i
universal_allocator	include/sieve/ALE_mem.hh	/^  class universal_allocator {$/;"	c	namespace:ALE
uns	bin/TOPSGenerator.py	/^          uns = "S"$/;"	v
uns	bin/TOPSGenerator.py	/^          uns = "Uns"$/;"	v
untar	config/configure.py	/^def untar(tar, path = '.', leading = ''):$/;"	f
upCells	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^  int    *upCells;$/;"	m	struct:__anon4	file:
upX	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^  double *upX;$/;"	m	struct:__anon4	file:
upY	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^  double *upY;$/;"	m	struct:__anon4	file:
upZ	src/dm/impls/mesh/examples/tutorials/fvTest.cxx	/^  double *upZ;$/;"	m	struct:__anon4	file:
update	config/BuildSystem/RDict.py	/^  def update(self, d):$/;"	m	class:RDict
update	config/BuildSystem/config/setsBackport.py	/^    def update(self, iterable):$/;"	m	class:Set
update	config/BuildSystem/config/setsOrdered.py	/^    def update(self, iterable):$/;"	m	class:Set
update	config/BuildSystem/sourceDatabase.py	/^  def update(self, d):$/;"	m	class:SourceDB
update	include/petsc-private/meshimpl.h	/^  PetscErrorCode (*update)(SectionInt,int,const PetscInt*,InsertMode);$/;"	m	struct:_SectionIntOps
update	include/petsc-private/meshimpl.h	/^  PetscErrorCode (*update)(SectionReal,int,const PetscScalar*,InsertMode);$/;"	m	struct:_SectionRealOps
update	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*update)(SNES, PetscInt);                     \/* General purpose function for update *\/$/;"	m	struct:_SNESOps
update	include/sieve/CartesianSieve.hh	/^    void update(const Obj<Section_>& section, const point_type& p, const typename Section_::value_type v[]) {$/;"	f	class:ALE::CartesianMesh
update	include/sieve/Field.hh	/^    void update() {$/;"	f	class:ALE::NewUniformSection
update	include/sieve/Field.hh	/^    void update() {$/;"	f	class:ALE::UniformSection
update	include/sieve/Field.hh	/^    void update(const value_type v[]) {$/;"	f	class:ALE::Section
update	include/sieve/Mesh.hh	/^    void update(const Obj<Section>& section, const point_type& p, const typename Section::value_type *v) {$/;"	f	class:ALE::IMesh
update	include/sieve/Mesh.hh	/^    void update(const Obj<Section_>& section, const point_type& p, const typename Section_::value_type v[]) {$/;"	f	class:ALE::Bundle
updateAdd	include/sieve/CartesianSieve.hh	/^    void updateAdd(const Obj<Section_>& section, const point_type& p, const typename Section_::value_type v[]) {$/;"	f	class:ALE::CartesianMesh
updateAdd	include/sieve/Mesh.hh	/^    void updateAdd(const Obj<Section>& section, const point_type& p, const typename Section::value_type *v) {$/;"	f	class:ALE::IMesh
updateAdd	include/sieve/Mesh.hh	/^    void updateAdd(const Obj<Section_>& section, const int tag, const int p, const typename Section_::value_type values[]) {$/;"	f	class:ALE::Bundle
updateAdd	include/sieve/Mesh.hh	/^    void updateAdd(const Obj<Section_>& section, const point_type& p, const typename Section_::value_type v[]) {$/;"	f	class:ALE::Bundle
updateAddPoint	include/sieve/Field.hh	/^    void updateAddPoint(const point_type& p, const value_type v[]) {$/;"	f	class:ALE::ConstantSection
updateAddPoint	include/sieve/Field.hh	/^    void updateAddPoint(const point_type& p, const value_type v[]) {$/;"	f	class:ALE::FauxConstantSection
updateAddPoint	include/sieve/Field.hh	/^    void updateAddPoint(const point_type& p, const value_type v[]) {$/;"	f	class:ALE::NewUniformSection
updateAddPoint	include/sieve/Field.hh	/^    void updateAddPoint(const point_type& p, const value_type v[]) {$/;"	f	class:ALE::UniformSection
updateAddPoint	include/sieve/Field.hh	/^    void updateAddPoint(const point_type& p, const value_type v[], const int orientation = 1) {$/;"	f	class:ALE::FEMSection
updateAddPoint	include/sieve/Field.hh	/^    void updateAddPoint(const point_type& p, const value_type v[], const int orientation = 1) {$/;"	f	class:ALE::GeneralSection
updateAddPoint	include/sieve/Field.hh	/^    void updateAddPoint(const point_type& p, const value_type v[], const int orientation = 1) {$/;"	f	class:ALE::Section
updateAddPoint	include/sieve/IField.hh	/^    void updateAddPoint(const point_type& p, const value_type v[]) {$/;"	f	class:ALE::IUniformSection
updateAddPoint	include/sieve/IField.hh	/^    void updateAddPoint(const point_type&, const value_type v[]) {$/;"	f	class:ALE::IConstantSection
updateAll	include/sieve/CartesianSieve.hh	/^    void updateAll(const Obj<Section_>& section, const point_type& p, const typename Section_::value_type v[]) {$/;"	f	class:ALE::CartesianMesh
updateAll	include/sieve/Mesh.hh	/^    void updateAll(const Obj<Section>& section, const point_type& p, const typename Section::value_type *v) {$/;"	f	class:ALE::IMesh
updateAll	include/sieve/Mesh.hh	/^    void updateAll(const Obj<Section_>& section, const point_type& p, const typename Section_::value_type v[]) {$/;"	f	class:ALE::Bundle
updateAllAdd	include/sieve/Mesh.hh	/^    void updateAllAdd(const Obj<Section_>& section, const point_type& p, const typename Section_::value_type v[]) {$/;"	f	class:ALE::Bundle
updateArrowSectionLocal	include/sieve/Distribution.hh	/^    static void updateArrowSectionLocal(const Obj<Section>& oldSection, const Obj<bundle_type>& newBundle, const Obj<Section>& newSection) {$/;"	f	class:ALE::Distribution
updateArrowSectionRemote	include/sieve/Distribution.hh	/^    static void updateArrowSectionRemote(const Obj<recv_overlap_type>& recvOverlap, const Obj<RecvSection>& recvSection, const Obj<bundle_type>& newBundle, const Obj<Section>& newSection) {$/;"	f	class:ALE::Distribution
updateBC	include/sieve/CartesianSieve.hh	/^    void updateBC(const Obj<Section_>& section, const point_type& p, const typename Section_::value_type v[]) {$/;"	f	class:ALE::CartesianMesh
updateBC	include/sieve/Mesh.hh	/^    void updateBC(const Obj<Section_>& section, const point_type& p, const typename Section_::value_type v[]) {$/;"	f	class:ALE::Bundle
updateClosure	include/sieve/Mesh.hh	/^    void updateClosure(const point_type& p, Visitor& v) {$/;"	f	class:ALE::IMesh
updateCompilers	config/BuildSystem/config/packages/MPI.py	/^  def updateCompilers(self, installDir, mpiccName, mpicxxName, mpif77Name, mpif90Name):$/;"	m	class:Configure
updateDependencies	config/BuildSystem/config/framework.py	/^  def updateDependencies(self):$/;"	m	class:Framework
updateDependencies	config/BuildSystem/make.py	/^  def updateDependencies(self, sourceDB):$/;"	m	class:Make
updateDependencies	config/BuildSystem/maker.py	/^  def updateDependencies(self, sourceDB):$/;"	m	class:Make
updateDependencies	config/builder.py	/^ def updateDependencies(self, libname, rootDir):$/;"	m	class:PETScMaker
updateDependencyGraph	config/BuildSystem/maker.py	/^  def updateDependencyGraph(self, graph, head):$/;"	m	class:Make
updateDuplicate	config/BuildSystem/config/setsOrdered.py	/^    def updateDuplicate(self,iterable):$/;"	m	class:Set
updateFile	config/BuildSystem/build/processor.py	/^  def updateFile(self, source):$/;"	m	class:Processor
updateFreeAddPoint	include/sieve/Field.hh	/^    void updateFreeAddPoint(const point_type& p, const value_type v[], const int orientation = 1) {$/;"	f	class:ALE::FEMSection
updateFreeAddPoint	include/sieve/Field.hh	/^    void updateFreeAddPoint(const point_type& p, const value_type v[], const int orientation = 1) {$/;"	f	class:ALE::GeneralSection
updateFreePoint	include/sieve/Field.hh	/^    void updateFreePoint(const point_type& p, const value_type v[], const int orientation = 1) {$/;"	f	class:ALE::FEMSection
updateFreePoint	include/sieve/Field.hh	/^    void updateFreePoint(const point_type& p, const value_type v[], const int orientation = 1) {$/;"	f	class:ALE::GeneralSection
updateMPICompilers	config/BuildSystem/config/setCompilers.py	/^  def updateMPICompilers(self, mpicc, mpicxx, mpifc):$/;"	m	class:Configure
updateNode	config/builder.py	/^  def updateNode(self, vertex):$/;"	m	class:NullSourceDatabase
updateNode	config/builder.py	/^  def updateNode(self, vertex):$/;"	m	class:SourceDatabase
updateNode	config/builder.py	/^  def updateNode(self, vertex):$/;"	m	class:SourceDatabaseDict
updateOperator	include/petscdmmesh.hh	/^PetscErrorCode updateOperator(Mat A, const Sieve& rowSieve, Visitor& iVr, const PETSC_MESH_TYPE::point_type& rowE, const Sieve& colSieve, Visitor& iVc, const PETSC_MESH_TYPE::point_type& colE, PetscScalar array[], InsertMode mode)$/;"	f
updateOperator	include/petscdmmesh.hh	/^PetscErrorCode updateOperator(Mat A, const Sieve& sieve, Visitor& iV, const PETSC_MESH_TYPE::point_type& e, PetscScalar array[], InsertMode mode)$/;"	f
updateOrder	include/sieve/INumbering.hh	/^    void updateOrder(const Obj<Numbering>& numbering, Sequence& points) {$/;"	f	class:ALE::INumberingFactory
updateOrder	include/sieve/Numbering.hh	/^    void updateOrder(const Obj<Numbering>& numbering, const Iterator& pointsBegin, const Iterator& pointsEnd) {$/;"	f	class:ALE::NumberingFactory
updateOverlap	include/sieve/Distribution.hh	/^    static void updateOverlap(const Obj<OrigSendOverlap>& origSendOverlap, const Obj<OrigRecvOverlap>& origRecvOverlap, const Obj<SendSection>& sendSection, const Obj<RecvSection>& recvSection, const Obj<send_overlap_type>& sendOverlap, const Obj<recv_overlap_type>& recvOverlap) {$/;"	f	class:ALE::Distribution
updatePackageDependencies	config/BuildSystem/config/framework.py	/^  def updatePackageDependencies(self):$/;"	m	class:Framework
updatePatches	bin/update.py	/^def updatePatches():$/;"	f
updatePoint	include/sieve/Field.hh	/^    void updatePoint(const point_type& p, const value_type v[]) {$/;"	f	class:ALE::ConstantSection
updatePoint	include/sieve/Field.hh	/^    void updatePoint(const point_type& p, const value_type v[]) {$/;"	f	class:ALE::FauxConstantSection
updatePoint	include/sieve/Field.hh	/^    void updatePoint(const point_type& p, const value_type v[]) {$/;"	f	class:ALE::NewUniformSection
updatePoint	include/sieve/Field.hh	/^    void updatePoint(const point_type& p, const value_type v[]) {$/;"	f	class:ALE::UniformSection
updatePoint	include/sieve/Field.hh	/^    void updatePoint(const point_type& p, const value_type v[], const int orientation = 1) {$/;"	f	class:ALE::FEMSection
updatePoint	include/sieve/Field.hh	/^    void updatePoint(const point_type& p, const value_type v[], const int orientation = 1) {$/;"	f	class:ALE::GeneralSection
updatePoint	include/sieve/Field.hh	/^    void updatePoint(const point_type& p, const value_type v[], const int orientation = 1) {$/;"	f	class:ALE::Section
updatePoint	include/sieve/IField.hh	/^    void updatePoint(const point_type& p, const value_type v[]) {$/;"	f	class:ALE::IUniformSection
updatePoint	include/sieve/IField.hh	/^    void updatePoint(const point_type&, const value_type v[]) {$/;"	f	class:ALE::IConstantSection
updatePoint	include/sieve/ISieve.hh	/^      void updatePoint(const Point& point, void (*fuse)(value_type&, value_type), const bool setBC, const int orientation = 1) {$/;"	f	class:ALE::ISieveVisitor::UpdateVecVisitor
updatePoint	include/sieve/ISieve.hh	/^      void updatePoint(const point_type& point, const bool setBC, const int orientation = 1) {$/;"	f	class:ALE::ISieveVisitor::IndicesVisitor
updatePointAll	include/sieve/Field.hh	/^    void updatePointAll(const point_type& p, const value_type v[]) {$/;"	f	class:ALE::NewUniformSection
updatePointAll	include/sieve/Field.hh	/^    void updatePointAll(const point_type& p, const value_type v[]) {$/;"	f	class:ALE::UniformSection
updatePointAll	include/sieve/Field.hh	/^    void updatePointAll(const point_type& p, const value_type v[], const int orientation = 1) {$/;"	f	class:ALE::FEMSection
updatePointAll	include/sieve/Field.hh	/^    void updatePointAll(const point_type& p, const value_type v[], const int orientation = 1) {$/;"	f	class:ALE::GeneralSection
updatePointAll	include/sieve/Field.hh	/^    void updatePointAll(const point_type& p, const value_type v[], const int orientation = 1) {$/;"	f	class:ALE::Section
updatePointAll	include/sieve/IField.hh	/^    void updatePointAll(const point_type& p, const value_type v[]) {$/;"	f	class:ALE::IUniformSection
updatePointAllAdd	include/sieve/Field.hh	/^    void updatePointAllAdd(const point_type& p, const value_type v[], const int orientation = 1) {$/;"	f	class:ALE::FEMSection
updatePointAllAdd	include/sieve/Field.hh	/^    void updatePointAllAdd(const point_type& p, const value_type v[], const int orientation = 1) {$/;"	f	class:ALE::GeneralSection
updatePointBC	include/sieve/Field.hh	/^    void updatePointBC(const point_type& p, const value_type v[], const int orientation = 1) {$/;"	f	class:ALE::FEMSection
updatePointBC	include/sieve/Field.hh	/^    void updatePointBC(const point_type& p, const value_type v[], const int orientation = 1) {$/;"	f	class:ALE::GeneralSection
updatePointBC	include/sieve/Field.hh	/^    void updatePointBC(const point_type& p, const value_type v[], const int orientation = 1) {$/;"	f	class:ALE::Section
updatePointBCFull	include/sieve/Field.hh	/^    void updatePointBCFull(const point_type& p, const value_type v[], const int orientation = 1) {$/;"	f	class:ALE::FEMSection
updatePointBCFull	include/sieve/Field.hh	/^    void updatePointBCFull(const point_type& p, const value_type v[], const int orientation = 1) {$/;"	f	class:ALE::GeneralSection
updatePointFields	include/sieve/ISieve.hh	/^      void updatePointFields(const Point& point, void (*fuse)(value_type&, value_type), const bool setBC, const int orientation = 1) {$/;"	f	class:ALE::ISieveVisitor::UpdateVecVisitor
updatePointFields	include/sieve/ISieve.hh	/^      void updatePointFields(const point_type& point, const bool setBC, const int orientation = 1) {$/;"	f	class:ALE::ISieveVisitor::IndicesVisitor
updateSectionLocal	include/sieve/Distribution.hh	/^    static void updateSectionLocal(const Obj<Section>& oldSection, const Obj<bundle_type>& newBundle, const Obj<Section>& newSection) {$/;"	f	class:ALE::Distribution
updateSectionRemote	include/sieve/Distribution.hh	/^    static void updateSectionRemote(const Obj<recv_overlap_type>& recvOverlap, const Obj<RecvSection>& recvSection, const Obj<bundle_type>& newBundle, const Obj<Section>& newSection) {$/;"	f	class:ALE::Distribution
updateSieve	include/sieve/Distribution.hh	/^    static void updateSieve(const Obj<RecvOverlap>& recvOverlap, const Obj<RecvSection>& recvSection, const Obj<sieve_type>& sieve) {$/;"	f	class:ALE::Distribution
updateSource	config/BuildSystem/sourceDatabase.py	/^  def updateSource(self, source, noChecksum = 0):$/;"	m	class:SourceDB
updateTypes	config/BuildSystem/RDict.py	/^  def updateTypes(self, d):$/;"	m	class:RDict
update_send_begin	include/web/AMS.py	/^    def update_send_begin(self,funct = null):$/;"	m	class:AMS_Memory
update_wrapper_with_doc	bin/pythonscripts/PetscBinaryIO.py	/^def update_wrapper_with_doc(wrapper, wrapped):$/;"	f
urlMapping	config/BuildSystem/maker.py	/^    import install.urlMapping$/;"	i
url_object	bin/urlget.py	/^class url_object:$/;"	c
urlget	bin/urlget.py	/^class urlget:$/;"	c
urllib	bin/TOPSInstaller.py	/^          import urllib$/;"	i
urllib	bin/adiforfix.py	/^import urllib$/;"	i
urllib	bin/petscnagupgrade.py	/^    import urllib$/;"	i
urllib	bin/update.py	/^    import urllib$/;"	i
urllib	bin/urlget.py	/^import urllib$/;"	i
urllib	config/BuildSystem/retrieval.py	/^import urllib$/;"	i
urllib	config/configure.py	/^import urllib$/;"	i
urllib2	config/BuildSystem/patch.py	/^import urllib2$/;"	i
urlparse	bin/urlget.py	/^    from urllib.parse import urlparse, urlunparse$/;"	i
urlparse	bin/urlget.py	/^    from urlparse import urlparse, urlunparse$/;"	i
urlparse	config/BuildSystem/nargs.py	/^      import urlparse$/;"	i
urlparse	config/BuildSystem/project.py	/^    import urlparse$/;"	i
urlparse	config/BuildSystem/retrieval.py	/^import urlparse$/;"	i
urlparse	config/BuildSystem/urlMappingInstalled.py	/^import urlparse$/;"	i
urlparse	config/BuildSystem/urlMappingLocal.py	/^import urlparse$/;"	i
urlunparse	bin/urlget.py	/^    from urllib.parse import urlparse, urlunparse$/;"	i
urlunparse	bin/urlget.py	/^    from urlparse import urlparse, urlunparse$/;"	i
us	config/BuildSystem/RDict.py	/^  import build.buildGraph # This is necessary for us to create BuildGraph objects on load$/;"	i
us	config/BuildSystem/RDict.py	/^  import project          # This is necessary for us to create Project objects on load$/;"	i
use	include/petsc-private/matimpl.h	/^  PetscBool  use;                           \/* indicates compressed rows have been checked and will be used *\/$/;"	m	struct:__anon3
useAmat	include/petsc-private/pcimpl.h	/^  PetscBool      useAmat; \/* used by several PC that including applying the operator inside the preconditioner *\/$/;"	m	struct:_p_PC
useGenerator	src/dm/impls/plex/examples/tests/ex7.c	/^  PetscBool useGenerator;                 \/* Construct mesh with a mesh generator *\/$/;"	m	struct:__anon1	file:
useMPICompilers	config/BuildSystem/config/setCompilers.py	/^  def useMPICompilers(self):$/;"	m	class:Configure
useNewImpl	include/petsc-private/meshimpl.h	/^  PetscBool            useNewImpl;$/;"	m	struct:__anon16
useRenumbering	include/sieve/ISieve.hh	/^      void useRenumbering(const bool renumber) {this->renumber = renumber;}$/;"	f	class:ALE::ISieveVisitor::FilteredPointRetriever
useSelect	config/BuildSystem/script.py	/^  useSelect = 1$/;"	v
useSelect	config/BuildSystem/script.py	/^  useSelect = int(useSelect)$/;"	v
useSelect	config/BuildSystem/script.py	/^useSelect = nargs.Arg.findArgument('useSelect', sys.argv[1:])$/;"	v
useSource	include/sieve/ISieve.hh	/^      bool         useSource;$/;"	m	class:ALE::ISieveVisitor::ConeVisitor
useSource	include/sieve/ISieve.hh	/^      bool         useSource;$/;"	m	class:ALE::ISieveVisitor::OrientedConeVisitor
useSource	include/sieve/ISieve.hh	/^      bool         useSource;$/;"	m	class:ALE::ISieveVisitor::SupportVisitor
useSubkey	include/sieve/LabelSifter.hh	/^        bool                                                      useSubkey;$/;"	m	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
useSubkey	include/sieve/Sifter.hh	/^        bool                                                      useSubkey;$/;"	m	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
useThreads	config/BuildSystem/RDict.py	/^  useThreads = 1$/;"	v
useThreads	config/BuildSystem/RDict.py	/^  useThreads = int(useThreads)$/;"	v
useThreads	config/BuildSystem/RDict.py	/^useThreads = nargs.Arg.findArgument('useThreads', sys.argv[1:])$/;"	v
useThreads	config/BuildSystem/script.py	/^  useThreads = 1$/;"	v
useThreads	config/BuildSystem/script.py	/^  useThreads = int(useThreads)$/;"	v
useThreads	config/BuildSystem/script.py	/^useThreads = nargs.Arg.findArgument('useThreads', sys.argv[1:])$/;"	v
useZeroBase	src/dm/impls/mesh/examples/tests/section1-old.cxx	/^  PetscBool  useZeroBase;        \/\/ Use zero-based indexing$/;"	m	struct:__anon22	file:
useZeroBase	src/dm/impls/mesh/examples/tests/sieve2-old.cxx	/^  PetscBool  useZeroBase;        \/\/ Use zero-based indexing$/;"	m	struct:__anon18	file:
useZeroBase	src/dm/impls/mesh/examples/tests/topology1.cxx	/^  PetscBool  useZeroBase;        \/\/ Use zero-based indexing$/;"	m	struct:__anon21	file:
useZeroBase	src/dm/impls/mesh/examples/tutorials/ex1.c	/^  PetscBool  useZeroBase;            \/\/ Use zero-based indexing$/;"	m	struct:__anon6	file:
useZeroBase	src/dm/impls/mesh/examples/tutorials/ex_coarsen.c	/^  PetscBool useZeroBase;         \/\/ Use zero-based indexing$/;"	m	struct:__anon7	file:
useZeroBase	src/dm/impls/mesh/examples/tutorials/ex_coarsen_2.c	/^  PetscBool useZeroBase;         \/\/ Use zero-based indexing$/;"	m	struct:__anon8	file:
useZeroBase	src/dm/impls/mesh/examples/tutorials/ex_coarsen_3.c	/^  PetscBool useZeroBase;         \/\/ Use zero-based indexing$/;"	m	struct:__anon1	file:
useZeroBase	src/dm/impls/mesh/examples/tutorials/mesh_surgery.cxx	/^  PetscBool  useZeroBase;$/;"	m	struct:__anon2	file:
use_alltoallv	include/petsc-private/vecimpl.h	/^  PetscBool              use_alltoallv;$/;"	m	struct:__anon29
use_alltoallw	include/petsc-private/vecimpl.h	/^  PetscBool              use_alltoallw;$/;"	m	struct:__anon29
use_readyreceiver	include/petsc-private/vecimpl.h	/^  PetscBool              use_readyreceiver;$/;"	m	struct:__anon29
use_window	include/petsc-private/vecimpl.h	/^  PetscBool              use_window;$/;"	m	struct:__anon29
used	include/petsclog.h	/^  PetscBool          used;      \/* The stage was pushed on this processor *\/$/;"	m	struct:_PetscStageInfo
usedt	include/petscmat.h	/^  PetscReal     usedt;$/;"	m	struct:__anon96
user	bin/processSummary.py	/^import user$/;"	i
user	config/BuildSystem/build/framework.py	/^import user$/;"	i
user	config/BuildSystem/checkdlllibs.py	/^import user$/;"	i
user	config/BuildSystem/config/framework.py	/^import user$/;"	i
user	config/BuildSystem/config/packages/BlasLapack.py	/^import user$/;"	i
user	config/BuildSystem/config/packages/CHOLMOD.py	/^import user$/;"	i
user	config/BuildSystem/config/packages/MPI.py	/^import user$/;"	i
user	config/BuildSystem/config/packages/PETSc.py	/^import user$/;"	i
user	config/BuildSystem/config/packages/UMFPACK.py	/^import user$/;"	i
user	config/BuildSystem/config/programs.py	/^import user$/;"	i
user	config/BuildSystem/config/regression/frameworkTest.py	/^import user$/;"	i
user	config/BuildSystem/config/regression/shellTest.py	/^import user$/;"	i
user	config/BuildSystem/getsplicers.py	/^import user$/;"	i
user	config/BuildSystem/make.py	/^import user$/;"	i
user	config/BuildSystem/pythonpath.py	/^import user$/;"	i
user	config/BuildSystem/regression/buildtest.py	/^import user$/;"	i
user	config/BuildSystem/setsplicers.py	/^import user$/;"	i
user	config/BuildSystem/sidldllpath.py	/^import user$/;"	i
user	config/PETSc/FEM.py	/^import user$/;"	i
user	config/PETSc/petsc.py	/^import user$/;"	i
user	config/PETSc/utilities/CHUD.py	/^import user$/;"	i
user	config/PETSc/utilities/Etags.py	/^import user$/;"	i
user	config/PETSc/utilities/FPTrap.py	/^import user$/;"	i
user	config/PETSc/utilities/Regression.py	/^import user$/;"	i
user	config/PETSc/utilities/bmakeDir.py	/^import user$/;"	i
user	config/PETSc/utilities/debuggers.py	/^import user$/;"	i
user	config/PETSc/utilities/debugging.py	/^import user$/;"	i
user	config/PETSc/utilities/fortranCPP.py	/^import user$/;"	i
user	config/PETSc/utilities/fortranCommandLine.py	/^import user$/;"	i
user	config/PETSc/utilities/languages.py	/^import user$/;"	i
user	config/PETSc/utilities/libraryOptions.py	/^import user$/;"	i
user	config/PETSc/utilities/memAlign.py	/^import user$/;"	i
user	config/PETSc/utilities/missing.py	/^import user$/;"	i
user	config/PETSc/utilities/scalarTypes.py	/^import user$/;"	i
user	config/PETSc/utilities/sharedLibraries.py	/^import user$/;"	i
user	config/PETSc/utilities/timer.py	/^import user$/;"	i
user	config/configure.py	/^import user$/;"	i
user	include/petsc-private/kspimpl.h	/^  void       *user;             \/* optional user-defined context *\/$/;"	m	struct:_p_KSP
user	include/petsc-private/pcimpl.h	/^  void           *user;             \/* optional user-defined context *\/$/;"	m	struct:_p_PC
user	include/petsc-private/snesimpl.h	/^  void  *user;                   \/* user-defined context *\/$/;"	m	struct:_p_SNES
user	include/petsc-private/tsimpl.h	/^  void     *user;                   \/* user context *\/$/;"	m	struct:_p_TS
user	include/petscdmplex.h	/^  void *user;$/;"	m	struct:__anon36
usercompute	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*usercompute)(SNES,void**);$/;"	m	struct:_SNESOps
userdestroy	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*userdestroy)(void**);$/;"	m	struct:_SNESOps
usersetbounds	include/petsc-private/snesimpl.h	/^  PetscBool   usersetbounds;     \/* bounds have been set via SNESVISetVariableBounds(), rather than via computevariablebounds() callback. *\/$/;"	m	struct:_p_SNES
usesksp	include/petsc-private/snesimpl.h	/^  PetscBool usesksp;$/;"	m	struct:_p_SNES
usespc	include/petsc-private/snesimpl.h	/^  PetscBool usespc;$/;"	m	struct:_p_SNES
usingC	config/BuildSystem/build/templates/usingCxx.py	/^      import build.templates.usingC$/;"	i
usingC	config/BuildSystem/build/templates/usingPython.py	/^      import build.templates.usingC$/;"	i
usingSIDL	config/BuildSystem/build/templates/SIDL.py	/^      import build.templates.usingSIDL$/;"	i
v	include/petsc-private/characteristicimpl.h	/^  PassiveScalar u, v; \/* Velocity of a point on the characteristic *\/$/;"	m	struct:_p_Item
v	include/petscvec.h	/^        struct _n_Vecs  {PetscInt n; Vec v;};$/;"	m	struct:_n_Vecs
v	include/sieve/Field.hh	/^    typedef struct {value_type v[fiberDim];}                                                      fiber_type;$/;"	m	struct:ALE::NewUniformSection::__anon4
v	include/sieve/Field.hh	/^    typedef struct {value_type v[fiberDim];}                 fiber_type;$/;"	m	struct:ALE::UniformSection::__anon3
v	include/sieve/Generator.hh	/^        int idx, v;$/;"	m	class:ALE::Triangle::Generator::SegmentVisitor
v	include/sieve/IField.hh	/^    typedef struct {value_type v[fiberDim];}                        fiber_type;$/;"	m	struct:ALE::IUniformSection::__anon6
v	include/sieve/ISieve.hh	/^      const Vec          v;$/;"	m	class:ALE::ISieveVisitor::RestrictVecVisitor
v	include/sieve/ISieve.hh	/^      const Vec          v;$/;"	m	class:ALE::ISieveVisitor::UpdateVecVisitor
v	include/sieve/Selection.hh	/^      int             v;$/;"	m	class:ALE::Selection::FaceVisitor
vNumbering	include/sieve/Generator.hh	/^        typename Mesh::numbering_type& vNumbering;$/;"	m	class:ALE::Triangle::Generator::SegmentVisitor
val	include/petsc-private/matimpl.h	/^  PetscScalar        *space_head,*val;$/;"	m	struct:_MatStashSpace
valid	config/PETSc/utilities/cacheDetails.py	/^  def valid(self,val):$/;"	m	class:CacheAttribute
validIndex	include/sieve/CartesianSieve.hh	/^        bool validIndex(const int indices[], const int code[]) {$/;"	f	class:ALE::CartesianSieveDef::SupportSequence::iterator
valid_GPU_array	include/petsc-private/vecimpl.h	/^  PetscCUSPFlag          valid_GPU_array;    \/* indicates where the most recently modified vector data is (GPU or CPU) *\/$/;"	m	struct:_p_Vec
valid_GPU_matrix	include/petsc-private/matimpl.h	/^  PetscCUSPFlag          valid_GPU_matrix; \/* flag pointing to the matrix on the gpu*\/$/;"	m	struct:_p_Mat
value	include/sieve/Mesh.hh	/^      int         value;$/;"	m	class:ALE::IBundle::LabelVisitor
valueName	config/BuildSystem/nargs.py	/^  def valueName(self, value):$/;"	m	class:ArgDownload
valueName	config/BuildSystem/nargs.py	/^  def valueName(self, value):$/;"	m	class:ArgFuzzyBool
value_alloc_type	include/sieve/Completion.hh	/^      typedef typename alloc_type::template rebind<value_type>::other                     value_alloc_type;$/;"	t	class:ALE::New::Completion
value_alloc_type	include/sieve/Numbering.hh	/^    typedef typename alloc_type::template rebind<value_type>::other                              value_alloc_type;$/;"	t	class:ALE::NumberingFactory
value_semantic	include/sieve/ALE_args.hh	/^    typedef ::boost::program_options::value_semantic value_semantic;$/;"	t	struct:ALE::AnyArg
value_semantic	include/sieve/ALE_args.hh	/^    typedef typename AnyArg::value_semantic value_semantic;$/;"	t	struct:ALE::Arg
value_semantic_ptr	include/sieve/ALE_args.hh	/^    typedef value_semantic*                          value_semantic_ptr;$/;"	t	struct:ALE::AnyArg
value_semantic_ptr	include/sieve/ALE_args.hh	/^    typedef value_semantic*                 value_semantic_ptr;$/;"	t	struct:ALE::Arg
value_type	include/petscsys.hh	/^    typedef Value_ value_type;$/;"	t	struct:PETSc::Point
value_type	include/sieve/ALE_containers.hh	/^      typedef typename extractor_type::result_type   value_type;$/;"	t	class:ALE::IndexSequence::iterator
value_type	include/sieve/ALE_containers.hh	/^    typedef element_type                                                               value_type;$/;"	t	class:ALE::set
value_type	include/sieve/ALE_mem.hh	/^    typedef T                 value_type;$/;"	t	class:ALE::malloc_allocator
value_type	include/sieve/ALE_mem.hh	/^    typedef typename Alloc::value_type      value_type;$/;"	t	class:ALE::polymorphic_allocator
value_type	include/sieve/ALE_mem.hh	/^    typedef typename polymorphic_allocator<T>::value_type      value_type;$/;"	t	class:ALE::logged_allocator
value_type	include/sieve/ALE_mem.hh	/^    typedef void        value_type;$/;"	t	class:ALE::malloc_allocator
value_type	include/sieve/BasicCommunication.hh	/^    typedef Value_                                 value_type;$/;"	t	class:ALE::MPIMover
value_type	include/sieve/CartesianSieve.hh	/^        typedef PointType_              value_type;$/;"	t	class:ALE::CartesianSieveDef::ConeSequence::iterator
value_type	include/sieve/CartesianSieve.hh	/^        typedef PointType_              value_type;$/;"	t	class:ALE::CartesianSieveDef::SupportSequence::iterator
value_type	include/sieve/CartesianSieve.hh	/^        typedef point_type              value_type;$/;"	t	class:ALE::CartesianSieveDef::PointSequence::iterator
value_type	include/sieve/Completion.hh	/^      typedef Value_                                                                      value_type;$/;"	t	class:ALE::New::Completion
value_type	include/sieve/Completion.hh	/^      typedef Value_ value_type;$/;"	t	class:ALE::New::ParallelFactory
value_type	include/sieve/Field.hh	/^      typedef typename Map::key_type  value_type;$/;"	t	class:ALE::SetFromMap::const_iterator
value_type	include/sieve/Field.hh	/^    typedef Value_                                                  value_type;$/;"	t	class:ALE::ConstantSection
value_type	include/sieve/Field.hh	/^    typedef Value_                                                  value_type;$/;"	t	class:ALE::FEMSection
value_type	include/sieve/Field.hh	/^    typedef Value_                                                  value_type;$/;"	t	class:ALE::GeneralSection
value_type	include/sieve/Field.hh	/^    typedef Value_                                                  value_type;$/;"	t	class:ALE::Section
value_type	include/sieve/Field.hh	/^    typedef Value_                                           value_type;$/;"	t	class:ALE::NewUniformSection
value_type	include/sieve/Field.hh	/^    typedef Value_                                           value_type;$/;"	t	class:ALE::UniformSection
value_type	include/sieve/Field.hh	/^    typedef Value_ value_type;$/;"	t	class:ALE::FauxConstantSection
value_type	include/sieve/Field.hh	/^    typedef typename section_type::value_type        value_type;$/;"	t	class:ALE::Field
value_type	include/sieve/IField.hh	/^    typedef Value_                                                  value_type;$/;"	t	class:ALE::IUniformSection
value_type	include/sieve/IField.hh	/^    typedef Value_ value_type;$/;"	t	class:ALE::IConstantSection
value_type	include/sieve/IField.hh	/^    typedef typename base::value_type       value_type;$/;"	t	class:ALE::IGeneralSection
value_type	include/sieve/IField.hh	/^    typedef typename base::value_type       value_type;$/;"	t	class:ALE::ISection
value_type	include/sieve/INumbering.hh	/^    typedef Value_                                                                               value_type;$/;"	t	class:ALE::INumberingFactory
value_type	include/sieve/INumbering.hh	/^    typedef typename base_type::value_type             value_type;$/;"	t	class:ALE::IGlobalOrder
value_type	include/sieve/INumbering.hh	/^    typedef typename base_type::value_type             value_type;$/;"	t	class:ALE::INumbering
value_type	include/sieve/ISieve.hh	/^        typedef PointType_              value_type;$/;"	t	class:ALE::IFSieveDef::Sequence::const_iterator
value_type	include/sieve/ISieve.hh	/^      typedef Value                        value_type;$/;"	t	class:ALE::ISieveVisitor::IndicesVisitor
value_type	include/sieve/ISieve.hh	/^      typedef Value                      value_type;$/;"	t	class:ALE::ISieveVisitor::IndicesVisitor
value_type	include/sieve/ISieve.hh	/^      typedef ValueType value_type;$/;"	t	class:ALE::ISieveVisitor::RestrictVecVisitor
value_type	include/sieve/ISieve.hh	/^      typedef ValueType value_type;$/;"	t	class:ALE::ISieveVisitor::UpdateVecVisitor
value_type	include/sieve/ISieve.hh	/^      typedef typename Section::value_type value_type;$/;"	t	class:ALE::ISieveVisitor::RestrictVisitor
value_type	include/sieve/ISieve.hh	/^      typedef typename Section::value_type value_type;$/;"	t	class:ALE::ISieveVisitor::UpdateAddVisitor
value_type	include/sieve/ISieve.hh	/^      typedef typename Section::value_type value_type;$/;"	t	class:ALE::ISieveVisitor::UpdateAllVisitor
value_type	include/sieve/ISieve.hh	/^      typedef typename Section::value_type value_type;$/;"	t	class:ALE::ISieveVisitor::UpdateVisitor
value_type	include/sieve/LabelSifter.hh	/^        typedef typename extractor_type::result_type   value_type;$/;"	t	class:ALE::NewSifterDef::IndexSequenceTraits::iterator_base
value_type	include/sieve/LabelSifter.hh	/^        typedef typename iterator_base::value_type         value_type;$/;"	t	class:ALE::NewSifterDef::IndexSequenceTraits::iterator
value_type	include/sieve/LabelSifter.hh	/^        typedef typename iterator_base::value_type         value_type;$/;"	t	class:ALE::NewSifterDef::ReversibleIndexSequenceTraits::reverse_iterator
value_type	include/sieve/Numbering.hh	/^    typedef Value_                                          value_type;$/;"	t	class:ALE::NumberingFactory
value_type	include/sieve/Numbering.hh	/^    typedef typename base_type::value_type value_type;$/;"	t	class:ALE::GlobalOrder
value_type	include/sieve/Numbering.hh	/^    typedef typename base_type::value_type value_type;$/;"	t	class:ALE::Numbering
value_type	include/sieve/Overlap.hh	/^    typedef first_type  value_type;$/;"	t	class:PETSc::DualSequence::iterator
value_type	include/sieve/SectionCompletion.hh	/^      typedef Value_                                                                           value_type;$/;"	t	class:ALE::New::SectionCompletion
value_type	include/sieve/Sections.hh	/^      typedef int                                value_type;$/;"	t	class:ALE::New::PartitionSection
value_type	include/sieve/Sections.hh	/^      typedef int                               value_type;$/;"	t	class:ALE::New::SizeSection
value_type	include/sieve/Sections.hh	/^      typedef int                              value_type;$/;"	t	class:ALE::New::ConeSizeSection
value_type	include/sieve/Sections.hh	/^      typedef int                              value_type;$/;"	t	class:ALE::New::PartitionSizeSection
value_type	include/sieve/Sections.hh	/^      typedef typename section_type::value_type value_type;$/;"	t	class:ALE::New::ArrowSection
value_type	include/sieve/Sections.hh	/^      typedef typename sieve_type::source_type value_type;$/;"	t	class:ALE::New::ConeSection
value_type	include/sieve/Sections.hh	/^      typedef typename sieve_type::target_type value_type;$/;"	t	class:ALE::New::SupportSection
value_type	include/sieve/Sections.hh	/^      typedef typename sieve_type::target_type value_type;$/;"	t	class:ALE::New::SupportSizeSection
value_type	include/sieve/Sections.hh	/^    typedef OrientedPoint<typename sieve_type::source_type> value_type;$/;"	t	class:ALE::OrientedConeSectionV
value_type	include/sieve/Sections.hh	/^    typedef int                                       value_type;$/;"	t	class:ALE::BaseSection
value_type	include/sieve/Sections.hh	/^    typedef int                                       value_type;$/;"	t	class:ALE::BaseSectionV
value_type	include/sieve/Sections.hh	/^    typedef int                                       value_type;$/;"	t	class:ALE::LabelBaseSection
value_type	include/sieve/Sections.hh	/^    typedef int                                       value_type;$/;"	t	class:ALE::LabelBaseSectionV
value_type	include/sieve/Sections.hh	/^    typedef int                                  value_type;$/;"	t	class:ALE::ConeSizeSectionV
value_type	include/sieve/Sections.hh	/^    typedef int                                 value_type;$/;"	t	class:ALE::ConeSizeSection
value_type	include/sieve/Sections.hh	/^    typedef int                                 value_type;$/;"	t	class:ALE::LabelSection
value_type	include/sieve/Sections.hh	/^    typedef typename sieve_type::source_type         value_type;$/;"	t	class:ALE::ConeSectionV
value_type	include/sieve/Sections.hh	/^    typedef typename sieve_type::source_type        value_type;$/;"	t	class:ALE::ConeSection
value_type	include/sieve/Sieve.hh	/^       typedef Value_ value_type;$/;"	t	class:ALE::SieveDef::RecContainerTraits::TwoValueSequence
value_type	include/sieve/Sieve.hh	/^       typedef Value_ value_type;$/;"	t	class:ALE::SieveDef::RecContainerTraits::ValueSequence
value_type	include/sieve/Sifter.hh	/^        typedef typename extractor_type::result_type   value_type;$/;"	t	class:ALE::SifterDef::IndexSequenceTraits::iterator_base
value_type	include/sieve/Sifter.hh	/^        typedef typename iterator_base::value_type         value_type;$/;"	t	class:ALE::SifterDef::IndexSequenceTraits::iterator
value_type	include/sieve/Sifter.hh	/^        typedef typename iterator_base::value_type         value_type;$/;"	t	class:ALE::SifterDef::ReversibleIndexSequenceTraits::reverse_iterator
value_type	src/dm/impls/mesh/examples/tests/meshTest.hh	/^      typedef ALE::Mesh::real_section_type::value_type value_type;$/;"	t	class:ALE::Test::MeshProcessor
value_type	src/dm/impls/mesh/examples/tests/overlapTest.hh	/^      typedef int                                    value_type;$/;"	t	class:ALE::Test::SupportSizer
values	include/petsc-private/vecimpl.h	/^  PetscScalar            *values;  \/* buffer for all sends or receives *\/$/;"	m	struct:__anon29
values	include/sieve/ISieve.hh	/^      const value_type  *values;$/;"	m	class:ALE::ISieveVisitor::UpdateVecVisitor
values	include/sieve/ISieve.hh	/^      const value_type *values;$/;"	m	class:ALE::ISieveVisitor::UpdateAddVisitor
values	include/sieve/ISieve.hh	/^      const value_type *values;$/;"	m	class:ALE::ISieveVisitor::UpdateAllVisitor
values	include/sieve/ISieve.hh	/^      const value_type *values;$/;"	m	class:ALE::ISieveVisitor::UpdateVisitor
values	include/sieve/ISieve.hh	/^      value_type         *values;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
values	include/sieve/ISieve.hh	/^      value_type        *values;$/;"	m	class:ALE::ISieveVisitor::RestrictVecVisitor
values	include/sieve/ISieve.hh	/^      value_type    *values;$/;"	m	class:ALE::ISieveVisitor::IndicesVisitor
values	include/sieve/ISieve.hh	/^      value_type    *values;$/;"	m	class:ALE::ISieveVisitor::RestrictVisitor
values	include/sieve/Overlap.hh	/^    const std::vector<point_type>& values;$/;"	m	class:PETSc::Overlap::sort_indices
values_type	include/sieve/Field.hh	/^    typedef std::map<point_type, fiber_type, std::less<point_type>, pair_alloc_type>              values_type;$/;"	t	class:ALE::NewUniformSection
values_type	include/sieve/Field.hh	/^    typedef std::map<point_type, fiber_type, std::less<point_type>, pair_alloc_type>              values_type;$/;"	t	class:ALE::UniformSection
values_type	include/sieve/Field.hh	/^    typedef value_type *                                            values_type;$/;"	t	class:ALE::FEMSection
values_type	include/sieve/Field.hh	/^    typedef value_type *                                            values_type;$/;"	t	class:ALE::GeneralSection
values_type	include/sieve/Field.hh	/^    typedef value_type *                                            values_type;$/;"	t	class:ALE::Section
values_type	include/sieve/IField.hh	/^    typedef typename base::values_type      values_type;$/;"	t	class:ALE::IGeneralSection
values_type	include/sieve/IField.hh	/^    typedef typename base::values_type      values_type;$/;"	t	class:ALE::ISection
values_type	include/sieve/IField.hh	/^    typedef value_type*                                             values_type;$/;"	t	class:ALE::IUniformSection
vatol	include/petsc-private/tsimpl.h	/^  Vec       vatol,vrtol;        \/* Relative and absolute tolerance in vector form *\/$/;"	m	struct:_p_TS
vec	include/petsc-private/matimpl.h	/^  Vec            vec;                   \/* for out of place removals *\/$/;"	m	struct:_p_MatNullSpace
vec_func	include/petsc-private/linesearchimpl.h	/^  Vec                 vec_func;$/;"	m	struct:_p_LineSearch
vec_func	include/petsc-private/snesimpl.h	/^  Vec  vec_func;                 \/* pointer to function *\/$/;"	m	struct:_p_SNES
vec_func_init_set	include/petsc-private/snesimpl.h	/^  PetscBool   vec_func_init_set;  \/* the initial function has been set *\/$/;"	m	struct:_p_SNES
vec_func_new	include/petsc-private/linesearchimpl.h	/^  Vec                 vec_func_new;$/;"	m	struct:_p_LineSearch
vec_rhs	include/petsc-private/kspimpl.h	/^  Vec vec_sol,vec_rhs;            \/* pointer to where user has stashed$/;"	m	struct:_p_KSP
vec_rhs	include/petsc-private/snesimpl.h	/^  Vec  vec_rhs;                  \/* If non-null, solve F(x) = rhs *\/$/;"	m	struct:_p_SNES
vec_sol	include/petsc-private/kspimpl.h	/^  Vec vec_sol,vec_rhs;            \/* pointer to where user has stashed$/;"	m	struct:_p_KSP
vec_sol	include/petsc-private/linesearchimpl.h	/^  Vec                 vec_sol;$/;"	m	struct:_p_LineSearch
vec_sol	include/petsc-private/snesimpl.h	/^  Vec  vec_sol;                  \/* pointer to solution *\/$/;"	m	struct:_p_SNES
vec_sol	include/petsc-private/tsimpl.h	/^  Vec           vec_sol;$/;"	m	struct:_p_TS
vec_sol_new	include/petsc-private/linesearchimpl.h	/^  Vec                 vec_sol_new;$/;"	m	struct:_p_LineSearch
vec_sol_update	include/petsc-private/snesimpl.h	/^  Vec  vec_sol_update;           \/* pointer to solution update *\/$/;"	m	struct:_p_SNES
vec_update	include/petsc-private/linesearchimpl.h	/^  Vec                 vec_update;$/;"	m	struct:_p_LineSearch
vecs	include/petsc-private/matimpl.h	/^  Vec*           vecs;$/;"	m	struct:_p_MatNullSpace
vectype	include/petsc-private/dmimpl.h	/^  VecType                 vectype;  \/* type of vector created with DMCreateLocalVector() and DMCreateGlobalVector() *\/$/;"	m	struct:_p_DM
veln_x	include/petscdmmesh_formats.hh	/^      ALE::Mesh<PetscInt,PetscScalar>::real_section_type::value_type veln_x;$/;"	m	struct:ALE::PCICE::__anon9
veln_x	include/petscdmmesh_formats.hh	/^      ALE::Mesh<PetscInt,PetscScalar>::real_section_type::value_type veln_x;$/;"	m	struct:ALE::PFLOTRAN::__anon10
veln_y	include/petscdmmesh_formats.hh	/^      ALE::Mesh<PetscInt,PetscScalar>::real_section_type::value_type veln_y;$/;"	m	struct:ALE::PCICE::__anon9
veln_y	include/petscdmmesh_formats.hh	/^      ALE::Mesh<PetscInt,PetscScalar>::real_section_type::value_type veln_y;$/;"	m	struct:ALE::PFLOTRAN::__anon10
velocity	include/petsc-private/characteristicimpl.h	/^  Vec          velocity;        \/* Velocity field at t_n *\/$/;"	m	struct:_p_Characteristic
velocityComp	include/petsc-private/characteristicimpl.h	/^  PetscInt    *velocityComp;    \/* Components of the velocity in the DM *\/$/;"	m	struct:_p_Characteristic
velocityCtx	include/petsc-private/characteristicimpl.h	/^  void        *velocityCtx;     \/* User context for velocity inteprolation *\/$/;"	m	struct:_p_Characteristic
velocityDA	include/petsc-private/characteristicimpl.h	/^  DM           velocityDA;      \/* DM for the velocity field *\/$/;"	m	struct:_p_Characteristic
velocityInterp	include/petsc-private/characteristicimpl.h	/^  PetscErrorCode (*velocityInterp)(Vec, PetscReal [], PetscInt, PetscInt [], PetscScalar [], void *);$/;"	m	struct:_p_Characteristic
velocityInterpLocal	include/petsc-private/characteristicimpl.h	/^  PetscErrorCode (*velocityInterpLocal)(void *, PetscReal [], PetscInt, PetscInt [], PetscScalar [], void *);$/;"	m	struct:_p_Characteristic
velocityOld	include/petsc-private/characteristicimpl.h	/^  Vec          velocityOld;     \/* Velocity field at t_n-1 *\/$/;"	m	struct:_p_Characteristic
verbose	config/builder.py	/^ def verbose(self):$/;"	m	class:PETScMaker
verbose	include/petsc-private/matimpl.h	/^  PetscInt    verbose;$/;"	m	struct:_p_MatCoarsen
verbosity	src/dm/impls/mesh/ALE.cxx	/^  static int verbosity = 0;$/;"	m	namespace:ALE	file:
verbosity_levels	config/BuildSystem/patch.py	/^  verbosity_levels = {0:logging.WARNING, 1:logging.INFO, 2:logging.DEBUG}$/;"	v	class:PatchSet
version	config/BuildSystem/config/packages/PETSc.py	/^  version = property(getVersion, doc = 'The PETSc version')$/;"	v	class:Configure
version	config/PETSc/petsc.py	/^  version = property(getVersion, doc = 'The PETSc version')$/;"	v	class:Configure
version	include/petsc-private/snesimpl.h	/^  PetscInt  version;             \/* flag indicating version 1 or 2 of test *\/$/;"	m	struct:__anon5
vertex	config/builder.py	/^  def vertex(filename):$/;"	m	class:SourceDatabase
vertex	include/petscdmmesh_formats.hh	/^      ALE::Mesh<PetscInt,PetscScalar>::point_type                    vertex;$/;"	m	struct:ALE::PCICE::__anon9
vertex	include/petscdmmesh_formats.hh	/^      ALE::Mesh<PetscInt,PetscScalar>::point_type                    vertex;$/;"	m	struct:ALE::PFLOTRAN::__anon10
vertex_weights	include/petsc-private/matimpl.h	/^  PetscInt    *vertex_weights;$/;"	m	struct:_p_MatPartitioning
vertexsectionintcreate_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  vertexsectionintcreate_(DM *mesh, CHAR name PETSC_MIXED_LEN(lenN), PetscInt *fiberDim, int *ierr PETSC_END_LEN(lenN))$/;"	f
vertexsectionintcreate_	src/dm/impls/mesh/ftn-custom/zmesh.c	14;"	d	file:
vertexsectionintcreate_	src/dm/impls/mesh/ftn-custom/zmesh.c	39;"	d	file:
vertexsectionrealcreate_	src/dm/impls/mesh/ftn-custom/zmesh.c	/^void PETSC_STDCALL  vertexsectionrealcreate_(DM *mesh, CHAR name PETSC_MIXED_LEN(lenN), PetscInt *fiberDim, int *ierr PETSC_END_LEN(lenN))$/;"	f
vertexsectionrealcreate_	src/dm/impls/mesh/ftn-custom/zmesh.c	13;"	d	file:
vertexsectionrealcreate_	src/dm/impls/mesh/ftn-custom/zmesh.c	38;"	d	file:
view	include/petsc-private/characteristicimpl.h	/^  PetscErrorCode (*view)(Characteristic, PetscViewer);$/;"	m	struct:_CharacteristicOps
view	include/petsc-private/dmimpl.h	/^  PetscErrorCode (*view)(DM,PetscViewer);$/;"	m	struct:_DMOps
view	include/petsc-private/drawimpl.h	/^  PetscErrorCode (*view)(PetscDraw,PetscViewer);$/;"	m	struct:_PetscDrawOps
view	include/petsc-private/isimpl.h	/^  PetscErrorCode (*view)(IS,PetscViewer);$/;"	m	struct:_ISOps
view	include/petsc-private/kspimpl.h	/^  PetscErrorCode (*view)(KSP,PetscViewer);$/;"	m	struct:_KSPOps
view	include/petsc-private/linesearchimpl.h	/^  PetscErrorCode (*view)(SNESLineSearch, PetscViewer);$/;"	m	struct:_LineSearchOps
view	include/petsc-private/matimpl.h	/^  PetscErrorCode (*view)(Mat,PetscViewer);$/;"	m	struct:_MatOps
view	include/petsc-private/matimpl.h	/^  PetscErrorCode (*view)(MatCoarsen,PetscViewer);$/;"	m	struct:_MatCoarsenOps
view	include/petsc-private/matimpl.h	/^  PetscErrorCode (*view)(MatPartitioning,PetscViewer);$/;"	m	struct:_MatPartitioningOps
view	include/petsc-private/meshimpl.h	/^  PetscErrorCode (*view)(SectionInt,PetscViewer);$/;"	m	struct:_SectionIntOps
view	include/petsc-private/meshimpl.h	/^  PetscErrorCode (*view)(SectionReal,PetscViewer);$/;"	m	struct:_SectionRealOps
view	include/petsc-private/pcimpl.h	/^  PetscErrorCode (*view)(PC,PetscViewer);$/;"	m	struct:_PCOps
view	include/petsc-private/petscimpl.h	/^   PetscErrorCode (*view)(PetscObject,PetscViewer);$/;"	m	struct:__anon11
view	include/petsc-private/snesimpl.h	/^  PetscErrorCode (*view)(SNES,PetscViewer);$/;"	m	struct:_SNESOps
view	include/petsc-private/threadcommimpl.h	/^  PetscErrorCode (*view)(PetscThreadComm,PetscViewer);$/;"	m	struct:_PetscThreadCommOps
view	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*view)(TS,PetscViewer);$/;"	m	struct:_TSOps
view	include/petsc-private/tsimpl.h	/^  PetscErrorCode (*view)(TSAdapt,PetscViewer);$/;"	m	struct:_TSAdaptOps
view	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*view)(Vec,PetscViewer);$/;"	m	struct:_VecOps
view	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*view)(VecScatter,PetscViewer);$/;"	m	struct:_p_VecScatter
view	include/petsc-private/viewerimpl.h	/^   PetscErrorCode (*view)(PetscViewer,PetscViewer);$/;"	m	struct:_PetscViewerOps
view	include/sieve/ALE_containers.hh	/^    void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) const {$/;"	f	class:ALE::ParallelObject
view	include/sieve/ALE_containers.hh	/^    void view(ostream_type& os, const char *name = NULL) {$/;"	f	class:ALE::array
view	include/sieve/ALE_containers.hh	/^    void view(ostream_type& os, const char *name = NULL) {$/;"	f	class:ALE::set
view	include/sieve/ALE_containers.hh	/^    void view(ostream_type& os, const char* label = NULL){$/;"	f	struct:ALE::IndexSequence
view	include/sieve/CartesianSieve.hh	/^    void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) {$/;"	f	class:ALE::CartesianBundle
view	include/sieve/CartesianSieve.hh	/^    void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) {$/;"	f	class:ALE::CartesianMesh
view	include/sieve/CartesianSieve.hh	/^    void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) {$/;"	f	class:ALE::CartesianSieve
view	include/sieve/Field.hh	/^    void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) const {$/;"	f	class:ALE::ConstantSection
view	include/sieve/Field.hh	/^    void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) const {$/;"	f	class:ALE::DiscreteSieve
view	include/sieve/Field.hh	/^    void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) const {$/;"	f	class:ALE::FEMSection
view	include/sieve/Field.hh	/^    void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) const {$/;"	f	class:ALE::FauxConstantSection
view	include/sieve/Field.hh	/^    void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) const {$/;"	f	class:ALE::Field
view	include/sieve/Field.hh	/^    void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) const {$/;"	f	class:ALE::GeneralSection
view	include/sieve/Field.hh	/^    void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) const {$/;"	f	class:ALE::Section
view	include/sieve/Field.hh	/^    void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) {$/;"	f	class:ALE::NewUniformSection
view	include/sieve/Field.hh	/^    void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) {$/;"	f	class:ALE::UniformSection
view	include/sieve/IField.hh	/^    void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) const {$/;"	f	class:ALE::IConstantSection
view	include/sieve/IField.hh	/^    void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) const {$/;"	f	class:ALE::IUniformSection
view	include/sieve/ISieve.hh	/^    void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) {$/;"	f	class:ALE::IFSieve
view	include/sieve/LabelSifter.hh	/^        void view(ostream_type& os, const char* label = NULL){$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
view	include/sieve/LabelSifter.hh	/^    PetscErrorCode view(const char* label = NULL, bool raw = false){$/;"	f	class:ALE::LabelSifter
view	include/sieve/LabelSifter.hh	/^    void view(ostream_type& os, const char* label = NULL, bool rawData = false){$/;"	f	class:ALE::LabelSifter
view	include/sieve/Mesh.hh	/^    void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) {$/;"	f	class:ALE::IMesh
view	include/sieve/Mesh.hh	/^    void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) {$/;"	f	class:ALE::Mesh
view	include/sieve/Overlap.hh	/^  void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) const {$/;"	f	class:PETSc::Overlap
view	include/sieve/Sections.hh	/^      void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) const {$/;"	f	class:ALE::New::ArrowSection
view	include/sieve/Sections.hh	/^      void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) const {$/;"	f	class:ALE::New::ConeSection
view	include/sieve/Sections.hh	/^      void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) const {$/;"	f	class:ALE::New::ConeSizeSection
view	include/sieve/Sections.hh	/^      void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) const {$/;"	f	class:ALE::New::PartitionSection
view	include/sieve/Sections.hh	/^      void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) const {$/;"	f	class:ALE::New::PartitionSizeSection
view	include/sieve/Sections.hh	/^      void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) const {$/;"	f	class:ALE::New::SizeSection
view	include/sieve/Sections.hh	/^      void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) const {$/;"	f	class:ALE::New::SupportSection
view	include/sieve/Sections.hh	/^      void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) const {$/;"	f	class:ALE::New::SupportSizeSection
view	include/sieve/Sieve.hh	/^    void Sieve<Point_,Marker_,Color_>::view(const char* label, MPI_Comm comm) {$/;"	f	class:ALE::Sieve
view	include/sieve/Sieve.hh	/^    void Sieve<Point_,Marker_,Color_>::view(ostream_type& os, const char* label, bool rawData){$/;"	f	class:ALE::Sieve
view	include/sieve/Sifter.hh	/^        void view(ostream_type& os, const bool& useColor = false, const char* label = NULL){$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
view	include/sieve/Sifter.hh	/^    PetscErrorCode view(const char* label = NULL, bool raw = false){$/;"	f	class:ALE::ASifter
view	include/sieve/Sifter.hh	/^    void view(ostream_type& os, const char* label = NULL, bool rawData = false){$/;"	f	class:ALE::ASifter
view	include/sieve/Topology.hh	/^    void view(const std::string& name, MPI_Comm comm = MPI_COMM_NULL) {$/;"	f	class:ALE::Topology
viewFlip	src/dm/impls/mesh/examples/tests/ex06.cxx	/^void viewFlip(const ALE::Obj<PointFlip>& flip, const char* name) {$/;"	f
viewPointConeArraySequence	src/dm/impls/mesh/examples/tests/ex04.cxx	/^PetscErrorCode viewPointConeArraySequence(PointConeArraySequence& aas, const char* label) {$/;"	f
viewStrata	src/dm/impls/mesh/examples/tests/ex02.c	/^PetscErrorCode viewStrata(ALE::Sieve *sieve, const char *name)$/;"	f
viewer	include/petscts.h	/^  PetscViewer viewer;$/;"	m	struct:__anon70
viewformatonassembly	include/petsc-private/matimpl.h	/^  PetscViewerFormat      viewformatonassembly;$/;"	m	struct:_p_Mat
viewformatonassembly	include/petsc-private/vecimpl.h	/^  PetscViewerFormat      viewformatonassembly;$/;"	m	struct:_p_Vec
viewonassembly	include/petsc-private/matimpl.h	/^  PetscViewer            viewonassembly;         \/* the following are set in MatSetFromOptions() and used in MatAssemblyEnd() *\/$/;"	m	struct:_p_Mat
viewonassembly	include/petsc-private/vecimpl.h	/^  PetscViewer            viewonassembly;   \/* if -vec_view is set in VecSetFromOptions() then these variables are used to implement it *\/$/;"	m	struct:_p_Vec
vinorm	include/petsc-private/linesearchimpl.h	/^  SNESLineSearchVINormFunc       vinorm;$/;"	m	struct:_LineSearchOps
viproject	include/petsc-private/linesearchimpl.h	/^  SNESLineSearchVIProjectFunc    viproject;$/;"	m	struct:_LineSearchOps
visible	include/petsclog.h	/^  PetscBool      visible;       \/* The flag to print info in summary *\/$/;"	m	struct:__anon65
visitArrow	include/petscdmmesh.hh	/^  void visitArrow(const Arrow&) {};$/;"	f	class:AdjVisitor
visitArrow	include/sieve/Generator.hh	/^        void visitArrow(const Arrow& arrow) {}$/;"	f	class:ALE::Triangle::Generator::SegmentVisitor
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const Arrow& arrow) const {$/;"	f	class:ALE::ISieveVisitor::PrintVisitor
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const Arrow& arrow) const {$/;"	f	class:ALE::ISieveVisitor::ReversePrintVisitor
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const Arrow& arrow, const int orientation) const {$/;"	f	class:ALE::ISieveVisitor::ReversePrintVisitor
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const Arrow& arrow, const int orientation) {}$/;"	f	class:ALE::ISieveVisitor::IndicesVisitor
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const Arrow& arrow, const int orientation) {}$/;"	f	class:ALE::ISieveVisitor::RestrictVecVisitor
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const Arrow& arrow, const int orientation) {}$/;"	f	class:ALE::ISieveVisitor::RestrictVisitor
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const Arrow& arrow, const int orientation) {}$/;"	f	class:ALE::ISieveVisitor::UpdateAddVisitor
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const Arrow& arrow, const int orientation) {}$/;"	f	class:ALE::ISieveVisitor::UpdateAllVisitor
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const Arrow& arrow, const int orientation) {}$/;"	f	class:ALE::ISieveVisitor::UpdateVecVisitor
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const Arrow& arrow, const int orientation) {}$/;"	f	class:ALE::ISieveVisitor::UpdateVisitor
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const arrow_type& arrow) {$/;"	f	class:ALE::ISieveVisitor::PointRetriever
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const arrow_type& arrow) {};$/;"	f	class:ALE::ISieveVisitor::FilteredPointRetriever
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const arrow_type& arrow, const int orientation) {$/;"	f	class:ALE::ISieveVisitor::PointRetriever
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const arrow_type& arrow, const int orientation) {};$/;"	f	class:ALE::ISieveVisitor::FilteredPointRetriever
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const typename Sieve::arrow_type& arrow) {$/;"	f	class:ALE::ISieveVisitor::ArrowRetriever
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const typename Sieve::arrow_type& arrow) {$/;"	f	class:ALE::ISieveVisitor::TransitiveClosureVisitor
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const typename Sieve::arrow_type& arrow) {};$/;"	f	class:ALE::ISieveVisitor::ConeVisitor
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const typename Sieve::arrow_type& arrow) {};$/;"	f	class:ALE::ISieveVisitor::OrientedConeVisitor
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const typename Sieve::arrow_type& arrow) {};$/;"	f	class:ALE::ISieveVisitor::SupportVisitor
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const typename Sieve::arrow_type& arrow, const int orientation) {$/;"	f	class:ALE::ISieveVisitor::ArrowRetriever
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const typename Sieve::arrow_type&) {};$/;"	f	class:ALE::ISieveVisitor::MarkVisitor
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const typename Sieve::arrow_type&) {};$/;"	f	class:ALE::ISieveVisitor::NullVisitor
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const typename Sieve::arrow_type&) {};$/;"	f	class:ALE::ISieveVisitor::SizeVisitor
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const typename Sieve::arrow_type&) {};$/;"	f	class:ALE::ISieveVisitor::SizeWithBCVisitor
visitArrow	include/sieve/ISieve.hh	/^      inline void visitArrow(const typename Sieve::arrow_type&, const int orientation) {};$/;"	f	class:ALE::ISieveVisitor::NullVisitor
visitArrow	include/sieve/Mesh.hh	/^      void visitArrow(const typename sieve_type::arrow_type& arrow) {$/;"	f	class:ALE::IBundle::DepthVisitor
visitArrow	include/sieve/Mesh.hh	/^      void visitArrow(const typename sieve_type::arrow_type& arrow) {$/;"	f	class:ALE::IBundle::HeightVisitor
visitArrow	include/sieve/Mesh.hh	/^      void visitArrow(const typename sieve_type::arrow_type& arrow) {$/;"	f	class:ALE::IBundle::MaxConeVisitor
visitArrow	include/sieve/Mesh.hh	/^      void visitArrow(const typename sieve_type::arrow_type& arrow) {$/;"	f	class:ALE::IBundle::MaxSupportVisitor
visitArrow	include/sieve/Partitioner.hh	/^      void visitArrow(const typename Sieve::arrow_type& arrow) {$/;"	f	class:ALE::Partitioner::AdjVisitor
visitArrow	include/sieve/Partitioner.hh	/^      void visitArrow(const typename Sieve::arrow_type& arrow) {$/;"	f	class:ALE::Partitioner::OffsetVisitor
visitArrow	include/sieve/Partitioner.hh	/^      void visitArrow(const typename Sieve::arrow_type& arrow) {};$/;"	f	class:ALE::Partitioner::MeetVisitor
visitArrow	include/sieve/Selection.hh	/^      void visitArrow(const arrow_type&) {};$/;"	f	class:ALE::Selection::FaceVisitor
visitPoint	include/petscdmmesh.hh	/^  void visitPoint(const point_type& point) {$/;"	f	class:AdjVisitor
visitPoint	include/sieve/Generator.hh	/^        void visitPoint(const Point& point) {$/;"	f	class:ALE::Triangle::Generator::SegmentVisitor
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const Point& point, const int orientation) {$/;"	f	class:ALE::ISieveVisitor::RestrictVecVisitor
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const Point& point, const int orientation) {$/;"	f	class:ALE::ISieveVisitor::RestrictVisitor
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const Point& point, const int orientation) {$/;"	f	class:ALE::ISieveVisitor::UpdateAddVisitor
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const Point& point, const int orientation) {$/;"	f	class:ALE::ISieveVisitor::UpdateAllVisitor
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const Point& point, const int orientation) {$/;"	f	class:ALE::ISieveVisitor::UpdateVecVisitor
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const Point& point, const int orientation) {$/;"	f	class:ALE::ISieveVisitor::UpdateVisitor
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const Point&) const {}$/;"	f	class:ALE::ISieveVisitor::PrintVisitor
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const Point&) const {}$/;"	f	class:ALE::ISieveVisitor::ReversePrintVisitor
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const Point&, const int) const {}$/;"	f	class:ALE::ISieveVisitor::ReversePrintVisitor
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const point_type& point) {$/;"	f	class:ALE::ISieveVisitor::ArrowRetriever
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const point_type& point) {$/;"	f	class:ALE::ISieveVisitor::FilteredPointRetriever
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const point_type& point) {$/;"	f	class:ALE::ISieveVisitor::PointRetriever
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const point_type& point, const int orientation) {$/;"	f	class:ALE::ISieveVisitor::ArrowRetriever
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const point_type& point, const int orientation) {$/;"	f	class:ALE::ISieveVisitor::FilteredPointRetriever
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const point_type& point, const int orientation) {$/;"	f	class:ALE::ISieveVisitor::IndicesVisitor
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const point_type& point, const int orientation) {$/;"	f	class:ALE::ISieveVisitor::PointRetriever
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const typename Sieve::point_type& point) const {};$/;"	f	class:ALE::ISieveVisitor::TransitiveClosureVisitor
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const typename Sieve::point_type& point) {$/;"	f	class:ALE::ISieveVisitor::ConeVisitor
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const typename Sieve::point_type& point) {$/;"	f	class:ALE::ISieveVisitor::MarkVisitor
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const typename Sieve::point_type& point) {$/;"	f	class:ALE::ISieveVisitor::OrientedConeVisitor
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const typename Sieve::point_type& point) {$/;"	f	class:ALE::ISieveVisitor::SizeVisitor
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const typename Sieve::point_type& point) {$/;"	f	class:ALE::ISieveVisitor::SizeWithBCVisitor
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const typename Sieve::point_type& point) {$/;"	f	class:ALE::ISieveVisitor::SupportVisitor
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const typename Sieve::point_type&) {};$/;"	f	class:ALE::ISieveVisitor::NullVisitor
visitPoint	include/sieve/ISieve.hh	/^      inline void visitPoint(const typename Sieve::point_type&, const int orientation) {};$/;"	f	class:ALE::ISieveVisitor::NullVisitor
visitPoint	include/sieve/Mesh.hh	/^      void visitPoint(const point_type& point) {$/;"	f	class:ALE::IBundle::DepthVisitor
visitPoint	include/sieve/Mesh.hh	/^      void visitPoint(const typename sieve_type::point_type& point) {$/;"	f	class:ALE::IBundle::BinaryStratifyVisitor
visitPoint	include/sieve/Mesh.hh	/^      void visitPoint(const typename sieve_type::point_type& point) {$/;"	f	class:ALE::IBundle::HeightVisitor
visitPoint	include/sieve/Mesh.hh	/^      void visitPoint(const typename sieve_type::point_type& point) {};$/;"	f	class:ALE::IBundle::MaxConeVisitor
visitPoint	include/sieve/Mesh.hh	/^      void visitPoint(const typename sieve_type::point_type& point) {};$/;"	f	class:ALE::IBundle::MaxSupportVisitor
visitPoint	include/sieve/Partitioner.hh	/^      void visitPoint(const typename Sieve::point_type& point) {$/;"	f	class:ALE::Partitioner::MeetVisitor
visitPoint	include/sieve/Partitioner.hh	/^      void visitPoint(const typename Sieve::point_type& point) {};$/;"	f	class:ALE::Partitioner::AdjVisitor
visitPoint	include/sieve/Partitioner.hh	/^      void visitPoint(const typename Sieve::point_type& point) {};$/;"	f	class:ALE::Partitioner::OffsetVisitor
visitPoint	include/sieve/Selection.hh	/^      void visitPoint(const point_type& point) {$/;"	f	class:ALE::Selection::FaceVisitor
visitor	include/sieve/ISieve.hh	/^      Visitor             *visitor;$/;"	m	class:ALE::ISieveVisitor::PointRetriever
visitor	include/sieve/ISieve.hh	/^      Visitor            *visitor;$/;"	m	class:ALE::ISieveVisitor::ArrowRetriever
visitor	include/sieve/ISieve.hh	/^      Visitor&     visitor;$/;"	m	class:ALE::ISieveVisitor::ConeVisitor
visitor	include/sieve/ISieve.hh	/^      Visitor&     visitor;$/;"	m	class:ALE::ISieveVisitor::OrientedConeVisitor
visitor	include/sieve/ISieve.hh	/^      Visitor&     visitor;$/;"	m	class:ALE::ISieveVisitor::SupportVisitor
visitor	include/sieve/ISieve.hh	/^      Visitor&     visitor;$/;"	m	class:ALE::ISieveVisitor::TransitiveClosureVisitor
visitor_type	include/sieve/ISieve.hh	/^      typedef Visitor visitor_type;$/;"	t	class:ALE::ISieveVisitor::TransitiveClosureVisitor
visitor_type	include/sieve/Sections.hh	/^    typedef typename ISieveVisitor::PointRetriever<sieve_type> visitor_type;$/;"	t	class:ALE::ConeSectionV
visitor_type	include/sieve/Sections.hh	/^    typedef typename ISieveVisitor::PointRetriever<sieve_type> visitor_type;$/;"	t	class:ALE::OrientedConeSectionV
vrtol	include/petsc-private/tsimpl.h	/^  Vec       vatol,vrtol;        \/* Relative and absolute tolerance in vector form *\/$/;"	m	struct:_p_TS
vscale	include/petsc-private/matimpl.h	/^  Vec            vscale;           \/* holds FD scaling, i.e. 1\/dx for each perturbed column *\/$/;"	m	struct:_p_MatFDColoring
vscaleforrow	include/petsc-private/matimpl.h	/^  PetscInt       **vscaleforrow;   \/* location in vscale for each columnsforrow[] entry *\/$/;"	m	struct:_p_MatFDColoring
vslots	include/petsc-private/vecimpl.h	/^  PetscInt       *vslots;              \/* locations of components *\/$/;"	m	struct:__anon26
vtkCellHeight	include/petsc-private/dmpleximpl.h	/^  PetscInt             vtkCellHeight;            \/* The height of cells for output, default is 0 *\/$/;"	m	struct:__anon30
vwork	include/petsc-private/snesimpl.h	/^  Vec         *vwork;            \/* more work vectors for Jacobian approx *\/$/;"	m	struct:_p_SNES
w	include/petsc-private/dmdaimpl.h	/^  PetscInt              w;                     \/* degrees of freedom per node *\/$/;"	m	struct:__anon23
w	include/petsc-private/drawimpl.h	/^  int             x,y,h,w;$/;"	m	struct:_p_PetscDraw
w1	include/petsc-private/matimpl.h	/^  Vec            w1,w2,w3;         \/* work vectors used in computing Jacobian *\/$/;"	m	struct:_p_MatFDColoring
w2	include/petsc-private/matimpl.h	/^  Vec            w1,w2,w3;         \/* work vectors used in computing Jacobian *\/$/;"	m	struct:_p_MatFDColoring
w3	include/petsc-private/matimpl.h	/^  Vec            w1,w2,w3;         \/* work vectors used in computing Jacobian *\/$/;"	m	struct:_p_MatFDColoring
walk	config/builder.py	/^  def walk(self, rootDir):$/;"	m	class:DirectoryTreeWalker
walkFunc	config/BuildSystem/build/fileset.py	/^  def walkFunc(self, defaultFiles, directory, fileList):$/;"	m	class:TreeFileSet
walkTree	config/BuildSystem/build/fileset.py	/^  def walkTree(self):$/;"	m	class:TreeFileSet
warning	config/BuildSystem/patch.py	/^warning = logger.warning$/;"	v
warnings	bin/pythonscripts/petsc_conf.py	/^import warnings$/;"	i
warnings	config/BuildSystem/script.py	/^  import warnings$/;"	i
was_assembled	include/petsc-private/matimpl.h	/^  PetscBool              was_assembled;    \/* new values inserted into assembled mat *\/$/;"	m	struct:_p_Mat
waxpy	include/petsc-private/vecimpl.h	/^  PetscErrorCode (*waxpy)(Vec,PetscScalar,Vec,Vec);         \/* w = y + alpha * x *\/$/;"	m	struct:_VecOps
wcounts	include/petsc-private/vecimpl.h	/^  PetscMPIInt            *wcounts,*wdispls;$/;"	m	struct:__anon29
wdispls	include/petsc-private/vecimpl.h	/^  PetscMPIInt            *wcounts,*wdispls;$/;"	m	struct:__anon29
window	include/petsc-private/vecimpl.h	/^  MPI_Win                window;$/;"	m	struct:__anon29
winstarts	include/petsc-private/vecimpl.h	/^  PetscInt               *winstarts;    \/* displacements in the processes I am putting to *\/$/;"	m	struct:__anon29
with_statement	config/builder.py	/^from __future__ import with_statement  # For python-2.5$/;"	i
work	include/petsc-private/kspimpl.h	/^  Vec            *work;$/;"	m	struct:_p_KSP
work	include/petsc-private/kspimpl.h	/^  Vec        work;$/;"	m	struct:__anon21
work	include/petsc-private/linesearchimpl.h	/^  Vec                 *work;$/;"	m	struct:_p_LineSearch
work	include/petsc-private/snesimpl.h	/^  Vec         *work;$/;"	m	struct:_p_SNES
work	include/petsc-private/tsimpl.h	/^  Vec      *work;$/;"	m	struct:_p_TS
work1	include/petsc-private/vecimpl.h	/^  PetscScalar    *work1;$/;"	m	struct:__anon28
work2	include/petsc-private/vecimpl.h	/^  PetscScalar    *work2;$/;"	m	struct:__anon28
workin	include/petsc-private/dmimpl.h	/^  DMWorkLink              workin,workout;$/;"	m	struct:_p_DM
workout	include/petsc-private/dmimpl.h	/^  DMWorkLink              workin,workout;$/;"	m	struct:_p_DM
wraps_with_doc	bin/pythonscripts/PetscBinaryIO.py	/^def wraps_with_doc(wrapped):$/;"	f
wrapumerate	config/BuildSystem/patch.py	/^    class wrapumerate(enumerate):$/;"	c	function:PatchSet.parse
write	config/cmakeboot.py	/^  def write(self,str):$/;"	m	class:StdoutLogger
write	config/cmakegen.py	/^  def write(self,str):$/;"	m	class:StdoutLogger
writeBinaryFile	bin/pythonscripts/PetscBinaryIO.py	/^    def writeBinaryFile(self, fid, objects):$/;"	m	class:PetscBinaryIO
writeBuildFlags	config/PETSc/Configure.py	/^    def writeBuildFlags(fd):$/;"	f	function:Configure.dumpCMakeConfig
writeElements	include/petscdmmesh_viewers.hh	/^  static PetscErrorCode writeElements(const Obj<Mesh>& mesh, PetscViewer viewer)$/;"	f	class:VTKViewer
writeElements	include/petscdmmesh_viewers.hh	/^  static PetscErrorCode writeElements(const Obj<Mesh>& mesh, PetscViewer viewer)$/;"	f	class:VTKXMLViewer
writeElements	include/petscdmmesh_viewers.hh	/^  static PetscErrorCode writeElements(const Obj<Mesh>& mesh, const Obj<typename Mesh::label_sequence>& elements, const Obj<typename Mesh::numbering_type>& cNumbering, const Obj<typename Mesh::numbering_type>& vNumbering, PetscViewer viewer)$/;"	f	class:VTKViewer
writeElements	include/petscdmmesh_viewers.hh	/^  static PetscErrorCode writeElements(const Obj<Mesh>& mesh, const Obj<typename Mesh::label_sequence>& elements, const Obj<typename Mesh::numbering_type>& cNumbering, const Obj<typename Mesh::numbering_type>& vNumbering, PetscViewer viewer)$/;"	f	class:VTKXMLViewer
writeElements	include/petscdmmesh_viewers.hh	/^  static PetscErrorCode writeElements(const Obj<Mesh>& mesh, const std::string& cLabelName, const int cLabelValue, const std::string& vLabelName, const int vLabelValue, PetscViewer viewer)$/;"	f	class:VTKViewer
writeElements	include/petscdmmesh_viewers.hh	/^  static PetscErrorCode writeElements(const Obj<Mesh>& mesh, const std::string& cLabelName, const int cLabelValue, const std::string& vLabelName, const int vLabelValue, PetscViewer viewer)$/;"	f	class:VTKXMLViewer
writeElements	include/petscdmmesh_viewers.hh	/^  static PetscErrorCode writeElements(const Obj<PETSC_MESH_TYPE>& mesh, const Obj<PETSC_MESH_TYPE::label_sequence>& elements, const Obj<PETSC_MESH_TYPE::numbering_type>& cNumbering, const Obj<PETSC_MESH_TYPE::numbering_type>& vNumbering, PetscViewer viewer)$/;"	f	class:VTKViewer
writeField	include/petscdmmesh_viewers.hh	/^    static PetscErrorCode writeField(const Obj<Section>& field, const std::string& name, const int fiberDim, const Obj<PETSC_MESH_TYPE::numbering_type>& numbering, PetscViewer viewer, int enforceDim = -1, int precision = 6) {$/;"	f	class:VTKViewer
writeFooter	include/petscdmmesh_viewers.hh	/^  static PetscErrorCode writeFooter(PetscViewer viewer) {$/;"	f	class:VTKXMLViewer
writeHeader	include/petscdmmesh_viewers.hh	/^  static PetscErrorCode writeHeader(const Obj<Mesh>& mesh, PetscViewer viewer) {$/;"	f	class:VTKViewer
writeHeader	include/petscdmmesh_viewers.hh	/^  static PetscErrorCode writeHeader(const Obj<Mesh>& mesh, PetscViewer viewer) {$/;"	f	class:VTKXMLViewer
writeIS	bin/pythonscripts/PetscBinaryIO.py	/^    def writeIS(self, fh, anis):$/;"	m	class:PetscBinaryIO
writeLabel	include/sieve/LabelSifter.hh	/^    static void writeLabel(std::ofstream& fs, LabelSifter& label) {$/;"	f	class:ALE::LabelSifterSerializer
writeLogLine	config/BuildSystem/RDict.py	/^  def writeLogLine(self, message):$/;"	m	class:RDict
writeMacroDefinitions	config/PETSc/Configure.py	/^    def writeMacroDefinitions(fd):$/;"	f	function:Configure.dumpCMakeConfig
writeMatSciPy	bin/pythonscripts/PetscBinaryIO.py	/^    def writeMatSciPy(self, fh, mat):$/;"	m	class:PetscBinaryIO
writeMatSparse	bin/pythonscripts/PetscBinaryIO.py	/^    def writeMatSparse(self, fh, mat):$/;"	m	class:PetscBinaryIO
writeMesh	include/sieve/Mesh.hh	/^    static void writeMesh(const std::string& filename, Mesh& mesh) {$/;"	f	class:ALE::MeshSerializer
writeMesh	include/sieve/Mesh.hh	/^    static void writeMesh(std::ofstream& fs, Mesh& mesh) {$/;"	f	class:ALE::MeshSerializer
writeOverlap	include/sieve/Overlap.hh	/^  static void writeOverlap(std::ofstream& fs, Overlap& overlap) {$/;"	f	class:PETSc::OverlapSerializer
writePackage	config/cmakegen.py	/^def writePackage(f,pkg,pkgdeps):$/;"	f
writeRoot	config/cmakegen.py	/^def writeRoot(f):$/;"	f
writeSection	include/petscdmmesh_viewers.hh	/^  static PetscErrorCode writeSection(const Obj<Section>& field, const int fiberDim, const Obj<PETSC_MESH_TYPE::numbering_type>& numbering, PetscViewer viewer, int enforceDim = -1, int precision = 6) {$/;"	f	class:VTKViewer
writeSection	include/petscdmmesh_viewers.hh	/^  static PetscErrorCode writeSection(const Obj<Section>& field, const int fiberDim, const Obj<PETSC_MESH_TYPE::numbering_type>& numbering, PetscViewer viewer, int enforceDim = -1, int precision = 6) {$/;"	f	class:VTKXMLViewer
writeSection	include/sieve/IField.hh	/^    static void writeSection(std::ofstream& fs, IConstantSection<Point_, Value_>& section) {$/;"	f	class:ALE::SectionSerializer
writeSection	include/sieve/IField.hh	/^    static void writeSection(std::ofstream& fs, IGeneralSection<Point_, Value_>& section) {$/;"	f	class:ALE::SectionSerializer
writeSection	include/sieve/IField.hh	/^    static void writeSection(std::ofstream& fs, ISection<Point_, Value_>& section) {$/;"	f	class:ALE::SectionSerializer
writeSection	include/sieve/IField.hh	/^    static void writeSection(std::ofstream& fs, IUniformSection<Point_, Value_, fiberDim>& section) {$/;"	f	class:ALE::SectionSerializer
writeServerAddr	config/BuildSystem/RDict.py	/^  def writeServerAddr(self, server):$/;"	m	class:RDict
writeSieve	include/sieve/ISieve.hh	/^    static void writeSieve(const std::string& filename, ISieve& sieve) {$/;"	f	class:ALE::ISieveSerializer
writeSieve	include/sieve/ISieve.hh	/^    static void writeSieve(std::ofstream& fs, ISieve& sieve) {$/;"	f	class:ALE::ISieveSerializer
writeSifter	include/sieve/Sifter.hh	/^    static void writeSifter(std::ofstream& fs, Sifter& sifter) {$/;"	f	class:ALE::SifterSerializer
writeVec	bin/pythonscripts/PetscBinaryIO.py	/^    def writeVec(self, fh, vec):$/;"	m	class:PetscBinaryIO
writeVertices	include/petscdmmesh_viewers.hh	/^  static PetscErrorCode writeVertices(const Obj<Mesh>& mesh, PetscViewer viewer) {$/;"	f	class:VTKViewer
writeVertices	include/petscdmmesh_viewers.hh	/^  static PetscErrorCode writeVertices(const Obj<Mesh>& mesh, PetscViewer viewer) {$/;"	f	class:VTKXMLViewer
write_hunks	config/BuildSystem/patch.py	/^  def write_hunks(self, srcname, tgtname, hunks):$/;"	m	class:PatchSet
writefile	bin/urlget.py	/^    def writefile(self,buf):$/;"	m	class:ftp_object
written	config/cmakegen.py	/^    written = True$/;"	v
x	include/petsc-private/characteristicimpl.h	/^  PassiveScalar x, y; \/* Coordinates of a point on the characteristic *\/$/;"	m	struct:_p_Item
x	include/petsc-private/dmimpl.h	/^  Vec                     x;       \/* location at which the functions\/Jacobian are computed *\/$/;"	m	struct:_p_DM
x	include/petsc-private/drawimpl.h	/^  int             x,y,h,w;$/;"	m	struct:_p_PetscDraw
x	include/petscdmadda.h	/^  PetscInt     *x;               \/* the coordinates, user has to make sure it is the correct size! *\/$/;"	m	struct:_ADDAIdx_s
x	include/petscdmda.h	/^typedef struct {PetscScalar x,y,z;} DMDACoor3d;$/;"	m	struct:__anon18
x	include/petscdmda.h	/^typedef struct {PetscScalar x,y;} DMDACoor2d;$/;"	m	struct:__anon17
x	include/petscsys.hh	/^    value_type x[dim];$/;"	m	struct:PETSc::Point
x	include/sieve/ParallelMapping.hh	/^    const _Tp& x;$/;"	m	struct:ALE::IsEqual
xdrlib	config/BuildSystem/RDict.py	/^    import xdrlib$/;"	i
xe	include/petsc-private/dmdaimpl.h	/^  PetscInt              xs,xe,ys,ye,zs,ze;     \/* range of local values *\/$/;"	m	struct:__anon23
xl	include/petsc-private/snesimpl.h	/^  Vec         xl,xu;             \/* upper and lower bounds for box constrained VI problems *\/$/;"	m	struct:_p_SNES
xl	include/petscdraw.h	/^  PetscReal *xl;$/;"	m	struct:__anon15
xm	include/petscdmdatypes.h	/^  PetscInt         xm,ym,zm;    \/* number of grid points on this processor, excluding ghosts *\/$/;"	m	struct:__anon5
xnorm	include/petsc-private/linesearchimpl.h	/^  PetscReal           xnorm;$/;"	m	struct:_p_LineSearch
xo	include/petsc-private/dmdaimpl.h	/^  PetscInt              xo,yo,zo;              \/* offsets for the indices in x y and z *\/$/;"	m	struct:__anon23
xol	include/petsc-private/dmdaimpl.h	/^  PetscInt              xol,yol,zol;           \/* overlap of local subdomains *\/$/;"	m	struct:__anon23
xr	include/petscdraw.h	/^  PetscReal *xr;$/;"	m	struct:__anon15
xs	include/petsc-private/dmdaimpl.h	/^  PetscInt              xs,xe,ys,ye,zs,ze;     \/* range of local values *\/$/;"	m	struct:__anon23
xs	include/petscdmdatypes.h	/^  PetscInt         xs,ys,zs;    \/* starting point of this processor, excluding ghosts *\/$/;"	m	struct:__anon5
xsieve_type	src/dm/impls/mesh/examples/tests/xsieve0.cxx	/^typedef ALE::Test::XSieveTester::default_xsieve_type     xsieve_type;$/;"	t	file:
xsieve_type	src/dm/impls/mesh/examples/tests/xsieve1.cxx	/^typedef ALE::Test::XSieveTester::default_xsieve_type     xsieve_type;$/;"	t	file:
xsieve_type	src/dm/impls/mesh/examples/tests/xsieve2.cxx	/^typedef ALE::Test::XSieveTester::default_xsieve_type     xsieve_type;$/;"	t	file:
xsieve_type	src/dm/impls/mesh/examples/tests/xsieve3.cxx	/^typedef ALE::Test::XSieveTester::default_xsieve_type     xsieve_type;$/;"	t	file:
xsieve_type	src/dm/impls/mesh/examples/tests/xsieve4.cxx	/^typedef ALE::Test::XSieveTester::symmetric_xsieve_type     xsieve_type;$/;"	t	file:
xu	include/petsc-private/snesimpl.h	/^  Vec         xl,xu;             \/* upper and lower bounds for box constrained VI problems *\/$/;"	m	struct:_p_SNES
y	bin/TOPSInstaller.py	/^          y = ynbox('Could not locate PETSc directory, should I download it?',title)$/;"	v
y	include/petsc-private/characteristicimpl.h	/^  PassiveScalar x, y; \/* Coordinates of a point on the characteristic *\/$/;"	m	struct:_p_Item
y	include/petsc-private/drawimpl.h	/^  int             x,y,h,w;$/;"	m	struct:_p_PetscDraw
y	include/petscdmda.h	/^typedef struct {PetscScalar x,y,z;} DMDACoor3d;$/;"	m	struct:__anon18
y	include/petscdmda.h	/^typedef struct {PetscScalar x,y;} DMDACoor2d;$/;"	m	struct:__anon17
ye	include/petsc-private/dmdaimpl.h	/^  PetscInt              xs,xe,ys,ye,zs,ze;     \/* range of local values *\/$/;"	m	struct:__anon23
yl	include/petscdraw.h	/^  PetscReal *yl;$/;"	m	struct:__anon15
ym	include/petscdmdatypes.h	/^  PetscInt         xm,ym,zm;    \/* number of grid points on this processor, excluding ghosts *\/$/;"	m	struct:__anon5
ynbox	bin/TOPSInstaller.py	/^def ynbox(message="Shall I continue?", title=""):$/;"	f
ynorm	include/petsc-private/linesearchimpl.h	/^  PetscReal           ynorm;$/;"	m	struct:_p_LineSearch
yo	include/petsc-private/dmdaimpl.h	/^  PetscInt              xo,yo,zo;              \/* offsets for the indices in x y and z *\/$/;"	m	struct:__anon23
yol	include/petsc-private/dmdaimpl.h	/^  PetscInt              xol,yol,zol;           \/* overlap of local subdomains *\/$/;"	m	struct:__anon23
yr	include/petscdraw.h	/^  PetscReal *yr;$/;"	m	struct:__anon15
ys	include/petsc-private/dmdaimpl.h	/^  PetscInt              xs,xe,ys,ye,zs,ze;     \/* range of local values *\/$/;"	m	struct:__anon23
ys	include/petscdmdatypes.h	/^  PetscInt         xs,ys,zs;    \/* starting point of this processor, excluding ghosts *\/$/;"	m	struct:__anon5
z	include/petscdmda.h	/^typedef struct {PetscScalar x,y,z;} DMDACoor3d;$/;"	m	struct:__anon18
zScale	src/dm/impls/mesh/examples/tutorials/ex_coarsen.c	/^  PetscReal zScale;              \/\/ The relative spread of levels for visualization$/;"	m	struct:__anon7	file:
zScale	src/dm/impls/mesh/examples/tutorials/ex_coarsen_2.c	/^  PetscReal zScale;              \/\/ The relative spread of levels for visualization$/;"	m	struct:__anon8	file:
zScale	src/dm/impls/mesh/examples/tutorials/ex_coarsen_3.c	/^  PetscReal zScale;              \/\/ The relative spread of levels for visualization$/;"	m	struct:__anon1	file:
ze	include/petsc-private/dmdaimpl.h	/^  PetscInt              xs,xe,ys,ye,zs,ze;     \/* range of local values *\/$/;"	m	struct:__anon23
zero	include/sieve/Field.hh	/^    void zero() {$/;"	f	class:ALE::FEMSection
zero	include/sieve/Field.hh	/^    void zero() {$/;"	f	class:ALE::GeneralSection
zero	include/sieve/Field.hh	/^    void zero() {$/;"	f	class:ALE::Section
zero	include/sieve/IField.hh	/^    void zero() {$/;"	f	class:ALE::IUniformSection
zeroBase	include/sieve/Partitioner.hh	/^      static bool zeroBase() {return false;}$/;"	f	class:ALE::Chaco::Partitioner
zeroBase	include/sieve/Partitioner.hh	/^      static bool zeroBase() {return true;}$/;"	f	class:ALE::ParMetis::Partitioner
zeroBase	include/sieve/Partitioner.hh	/^      static bool zeroBase() {return true;}$/;"	f	class:ALE::Simple::Partitioner
zeroWithBC	include/sieve/Field.hh	/^    void zeroWithBC() {$/;"	f	class:ALE::GeneralSection
zeroentries	include/petsc-private/matimpl.h	/^  PetscErrorCode (*zeroentries)(Mat);$/;"	m	struct:_MatOps
zeropivot	include/petscmat.h	/^  PetscReal     zeropivot;      \/* pivot is called zero if less than this *\/$/;"	m	struct:__anon96
zerorows	include/petsc-private/matimpl.h	/^  PetscErrorCode (*zerorows)(Mat,PetscInt,const PetscInt[],PetscScalar,Vec,Vec);$/;"	m	struct:_MatOps
zerorowscolumns	include/petsc-private/matimpl.h	/^  PetscErrorCode (*zerorowscolumns)(Mat,PetscInt,const PetscInt[],PetscScalar,Vec,Vec);$/;"	m	struct:_MatOps
zerorowslocal	include/petsc-private/matimpl.h	/^  PetscErrorCode (*zerorowslocal)(Mat,PetscInt,const PetscInt[],PetscScalar,Vec,Vec);$/;"	m	struct:_MatOps
zm	include/petscdmdatypes.h	/^  PetscInt         xm,ym,zm;    \/* number of grid points on this processor, excluding ghosts *\/$/;"	m	struct:__anon5
zo	include/petsc-private/dmdaimpl.h	/^  PetscInt              xo,yo,zo;              \/* offsets for the indices in x y and z *\/$/;"	m	struct:__anon23
zol	include/petsc-private/dmdaimpl.h	/^  PetscInt              xol,yol,zol;           \/* overlap of local subdomains *\/$/;"	m	struct:__anon23
zs	include/petsc-private/dmdaimpl.h	/^  PetscInt              xs,xe,ys,ye,zs,ze;     \/* range of local values *\/$/;"	m	struct:__anon23
zs	include/petscdmdatypes.h	/^  PetscInt         xs,ys,zs;    \/* starting point of this processor, excluding ghosts *\/$/;"	m	struct:__anon5
~ASifter	include/sieve/Sifter.hh	/^    virtual ~ASifter() {$/;"	f	class:ALE::ASifter
~AnyArg	include/sieve/ALE_args.hh	/^    virtual ~AnyArg(){};$/;"	f	struct:ALE::AnyArg
~Arg	include/sieve/ALE_args.hh	/^    virtual ~Arg() {} \/\/ we do not delete _dtor since it's destroyed$/;"	f	struct:ALE::Arg
~Arrow	include/sieve/ALE_containers.hh	/^    ~Arrow(){};$/;"	f	struct:ALE::Arrow
~ArrowSection	include/sieve/Sections.hh	/^      virtual ~ArrowSection() {if (this->_cone) delete [] this->_cone;};$/;"	f	class:ALE::New::ArrowSection
~ArrowSequence	include/sieve/LabelSifter.hh	/^        virtual ~ArrowSequence() {};$/;"	f	class:ALE::NewSifterDef::ArrowContainerTraits::ArrowSequence
~ArrowSequence	include/sieve/Sifter.hh	/^        virtual ~ArrowSequence() {};$/;"	f	class:ALE::SifterDef::ArrowContainerTraits::ArrowSequence
~BaseSection	include/sieve/Sections.hh	/^    ~BaseSection() {};$/;"	f	class:ALE::BaseSection
~BaseSectionV	include/sieve/Sections.hh	/^    ~BaseSectionV() {};$/;"	f	class:ALE::BaseSectionV
~BoundaryCondition	include/sieve/Mesh.hh	/^    ~BoundaryCondition() {};$/;"	f	class:ALE::BoundaryCondition
~Builder	include/petscdmmesh_formats.hh	/^      virtual ~Builder() {};$/;"	f	class:ALE::PCICE::Builder
~Builder	include/petscdmmesh_formats.hh	/^      virtual ~Builder() {};$/;"	f	class:ALE::PFLOTRAN::Builder
~Builder	include/petscdmmesh_formats.hh	/^      virtual ~Builder() {};$/;"	f	class:ALE::PyLith::Builder
~Bundle	include/sieve/Mesh.hh	/^    virtual ~Bundle() {};$/;"	f	class:ALE::Bundle
~CartesianBundle	include/sieve/CartesianSieve.hh	/^    virtual ~CartesianBundle() {};$/;"	f	class:ALE::CartesianBundle
~CartesianMesh	include/sieve/CartesianSieve.hh	/^    virtual ~CartesianMesh() {};$/;"	f	class:ALE::CartesianMesh
~CartesianSieve	include/sieve/CartesianSieve.hh	/^    virtual ~CartesianSieve() {$/;"	f	class:ALE::CartesianSieve
~ConeSection	include/sieve/Sections.hh	/^      virtual ~ConeSection() {if (this->_cone) delete [] this->_cone;};$/;"	f	class:ALE::New::ConeSection
~ConeSection	include/sieve/Sections.hh	/^    ~ConeSection() {};$/;"	f	class:ALE::ConeSection
~ConeSectionV	include/sieve/Sections.hh	/^    ~ConeSectionV() {$/;"	f	class:ALE::ConeSectionV
~ConeSequence	include/sieve/CartesianSieve.hh	/^      virtual ~ConeSequence() {$/;"	f	class:ALE::CartesianSieveDef::ConeSequence
~ConeSizeSection	include/sieve/Sections.hh	/^      virtual ~ConeSizeSection() {};$/;"	f	class:ALE::New::ConeSizeSection
~ConeSizeSection	include/sieve/Sections.hh	/^    ~ConeSizeSection() {};$/;"	f	class:ALE::ConeSizeSection
~ConeSizeSectionV	include/sieve/Sections.hh	/^    ~ConeSizeSectionV() {};$/;"	f	class:ALE::ConeSizeSectionV
~DiscreteSieve	include/sieve/Field.hh	/^    virtual ~DiscreteSieve() {};$/;"	f	class:ALE::DiscreteSieve
~Discretization	include/sieve/Mesh.hh	/^    virtual ~Discretization() {$/;"	f	class:ALE::Discretization
~DualSequence	include/sieve/Overlap.hh	/^  virtual ~DualSequence() {};$/;"	f	class:PETSc::DualSequence
~Edge	src/dm/impls/mesh/examples/tests/refinementTest.cxx	/^  ~Edge() {};$/;"	f	class:Edge
~Exception	include/petscsys.hh	/^    ~Exception() throw () {}$/;"	f	class:PETSc::Exception
~FEMSection	include/sieve/Field.hh	/^    ~FEMSection() {$/;"	f	class:ALE::FEMSection
~FaceInserter	include/sieve/Selection.hh	/^      virtual ~FaceInserter() {};$/;"	f	class:ALE::Selection::FaceInserter
~FaceInserterV	include/sieve/Selection.hh	/^      virtual ~FaceInserterV() {};$/;"	f	class:ALE::Selection::FaceInserterV
~FaceRecognizer	include/sieve/Partitioner.hh	/^      ~FaceRecognizer() {};$/;"	f	class:ALE::Partitioner::FaceRecognizer
~Field	include/sieve/Field.hh	/^    virtual ~Field() {};$/;"	f	class:ALE::Field
~FilteredPointRetriever	include/sieve/ISieve.hh	/^      ~FilteredPointRetriever() {$/;"	f	class:ALE::ISieveVisitor::FilteredPointRetriever
~GeneralBoundaryCondition	include/sieve/FEMProblem.hh	/^      virtual ~GeneralBoundaryCondition() {};$/;"	f	class:ALE::Problem::GeneralBoundaryCondition
~GeneralDiscretization	include/sieve/FEMProblem.hh	/^      virtual ~GeneralDiscretization() {$/;"	f	class:ALE::Problem::GeneralDiscretization
~GeneralIntegral	include/sieve/FEMProblem.hh	/^      virtual ~GeneralIntegral () {};$/;"	f	class:ALE::Problem::GeneralIntegral
~GeneralSection	include/sieve/Field.hh	/^    ~GeneralSection() {$/;"	f	class:ALE::GeneralSection
~GenericFormSubProblem	include/sieve/FEMProblem.hh	/^      ~GenericFormSubProblem(){};$/;"	f	class:ALE::Problem::GenericFormSubProblem
~GlobalOrder	include/sieve/Numbering.hh	/^    ~GlobalOrder() {$/;"	f	class:ALE::GlobalOrder
~IBundle	include/sieve/Mesh.hh	/^    virtual ~IBundle() {};$/;"	f	class:ALE::IBundle
~IFSieve	include/sieve/ISieve.hh	/^    ~IFSieve() {$/;"	f	class:ALE::IFSieve
~IGeneralSection	include/sieve/IField.hh	/^    ~IGeneralSection() {};$/;"	f	class:ALE::IGeneralSection
~IGlobalOrder	include/sieve/INumbering.hh	/^    ~IGlobalOrder() {$/;"	f	class:ALE::IGlobalOrder
~INumbering	include/sieve/INumbering.hh	/^    ~INumbering() {$/;"	f	class:ALE::INumbering
~INumberingFactory	include/sieve/INumbering.hh	/^    ~INumberingFactory() {};$/;"	f	class:ALE::INumberingFactory
~ISection	include/sieve/IField.hh	/^    virtual ~ISection() {};$/;"	f	class:ALE::ISection
~IUniformSection	include/sieve/IField.hh	/^    virtual ~IUniformSection() {$/;"	f	class:ALE::IUniformSection
~IndexSequence	include/sieve/ALE_containers.hh	/^    virtual ~IndexSequence() {};$/;"	f	struct:ALE::IndexSequence
~IndicesVisitor	include/sieve/ISieve.hh	/^      ~IndicesVisitor() {$/;"	f	class:ALE::ISieveVisitor::IndicesVisitor
~LabelBaseSection	include/sieve/Sections.hh	/^    ~LabelBaseSection() {};$/;"	f	class:ALE::LabelBaseSection
~LabelBaseSectionV	include/sieve/Sections.hh	/^    ~LabelBaseSectionV() {};$/;"	f	class:ALE::LabelBaseSectionV
~LabelSection	include/sieve/Sections.hh	/^    ~LabelSection() {};$/;"	f	class:ALE::LabelSection
~LabelSifter	include/sieve/LabelSifter.hh	/^    virtual ~LabelSifter() {};$/;"	f	class:ALE::LabelSifter
~MPIMover	include/sieve/BasicCommunication.hh	/^    ~MPIMover() {$/;"	f	class:ALE::MPIMover
~MeetVisitor	include/sieve/Partitioner.hh	/^      ~MeetVisitor() {delete [] this->neighborCells; delete this->pR;};$/;"	f	class:ALE::Partitioner::MeetVisitor
~MemoryLogger	include/sieve/ALE_mem.hh	/^    ~MemoryLogger() {};$/;"	f	class:ALE::MemoryLogger
~Mesh	include/sieve/Mesh.hh	/^    ~Mesh() {$/;"	f	class:ALE::Mesh
~MeshManager	include/sieve/Partitioner.hh	/^      ~MeshManager() {$/;"	f	class:ALE::Partitioner::MeshManager
~MeshNConeRetriever	include/sieve/ISieve.hh	/^      virtual ~MeshNConeRetriever() {};$/;"	f	class:ALE::ISieveVisitor::MeshNConeRetriever
~NConeRetriever	include/sieve/ISieve.hh	/^      virtual ~NConeRetriever() {};$/;"	f	class:ALE::ISieveVisitor::NConeRetriever
~NewUniformSection	include/sieve/Field.hh	/^    ~NewUniformSection() {$/;"	f	class:ALE::NewUniformSection
~Numbering	include/sieve/Numbering.hh	/^    virtual ~Numbering() {$/;"	f	class:ALE::Numbering
~NumberingFactory	include/sieve/Numbering.hh	/^    ~NumberingFactory() {};$/;"	f	class:ALE::NumberingFactory
~Obj	include/sieve/ALE_mem.hh	/^  Obj<X,A>::~Obj(){$/;"	f	class:ALE::Obj
~OrientedConeSectionV	include/sieve/Sections.hh	/^    ~OrientedConeSectionV() {$/;"	f	class:ALE::OrientedConeSectionV
~OrientedPoint	include/sieve/ISieve.hh	/^    ~OrientedPoint() {};$/;"	f	class:ALE::OrientedPoint
~Overlap	include/sieve/Overlap.hh	/^  ~Overlap() {$/;"	f	class:PETSc::Overlap
~ParallelFactory	include/sieve/Completion.hh	/^      ~ParallelFactory() {};$/;"	f	class:ALE::New::ParallelFactory
~ParallelObject	include/sieve/ALE_containers.hh	/^    ~ParallelObject() {};$/;"	f	class:ALE::ParallelObject
~PartitionDomain	include/sieve/Sections.hh	/^      ~PartitionDomain() {};$/;"	f	class:ALE::New::PartitionDomain
~PartitionSection	include/sieve/Sections.hh	/^      virtual ~PartitionSection() {$/;"	f	class:ALE::New::PartitionSection
~PartitionSizeSection	include/sieve/Sections.hh	/^      virtual ~PartitionSizeSection() {};$/;"	f	class:ALE::New::PartitionSizeSection
~Partitioner	include/sieve/Partitioner.hh	/^      ~Partitioner() {};$/;"	f	class:ALE::Chaco::Partitioner
~Partitioner	include/sieve/Partitioner.hh	/^      ~Partitioner() {};$/;"	f	class:ALE::Simple::Partitioner
~PointFactory	include/sieve/ParallelMapping.hh	/^    ~PointFactory() {};$/;"	f	class:ALE::PointFactory
~PointRetriever	include/sieve/ISieve.hh	/^      virtual ~PointRetriever() {$/;"	f	class:ALE::ISieveVisitor::PointRetriever
~PointSequence	include/sieve/CartesianSieve.hh	/^      virtual ~PointSequence() {};$/;"	f	class:ALE::CartesianSieveDef::PointSequence
~PointSequence	include/sieve/Sieve.hh	/^       virtual ~PointSequence(){};$/;"	f	class:ALE::SieveDef::RecContainerTraits::PointSequence
~PointSequence	include/sieve/Sifter.hh	/^       virtual ~PointSequence(){};$/;"	f	class:ALE::SifterDef::RecContainerTraits::PointSequence
~PointerSequence	include/sieve/Overlap.hh	/^  ~PointerSequence() {};$/;"	f	class:PETSc::PointerSequence
~RecvOverlap	include/sieve/Overlap.hh	/^  ~RecvOverlap() {};$/;"	f	class:PETSc::RecvOverlap
~RestrictVecVisitor	include/sieve/ISieve.hh	/^      ~RestrictVecVisitor() {$/;"	f	class:ALE::ISieveVisitor::RestrictVecVisitor
~RestrictVisitor	include/sieve/ISieve.hh	/^      ~RestrictVisitor() {if (this->allocated) {delete [] this->values;}};$/;"	f	class:ALE::ISieveVisitor::RestrictVisitor
~Section	include/sieve/Field.hh	/^    virtual ~Section() {$/;"	f	class:ALE::Section
~SegmentVisitor	include/sieve/Generator.hh	/^        ~SegmentVisitor() {};$/;"	f	class:ALE::Triangle::Generator::SegmentVisitor
~SendOverlap	include/sieve/Overlap.hh	/^  ~SendOverlap() {};$/;"	f	class:PETSc::SendOverlap
~Sequence	include/sieve/ISieve.hh	/^      virtual ~Sequence() {};$/;"	f	class:ALE::IFSieveDef::Sequence
~Sieve	include/sieve/Sieve.hh	/^      virtual ~Sieve() {$/;"	f	class:ALE::Sieve
~SimpleFaceRecognizer	include/sieve/Partitioner.hh	/^      ~SimpleFaceRecognizer() {};$/;"	f	class:ALE::Partitioner::SimpleFaceRecognizer
~SizeSection	include/sieve/Sections.hh	/^      virtual ~SizeSection() {};$/;"	f	class:ALE::New::SizeSection
~SubProblem	include/sieve/FEMProblem.hh	/^      virtual ~SubProblem() {};$/;"	f	class:ALE::Problem::SubProblem
~SupportSection	include/sieve/Sections.hh	/^      virtual ~SupportSection() {if (this->_support) delete [] this->_support;};$/;"	f	class:ALE::New::SupportSection
~SupportSequence	include/sieve/CartesianSieve.hh	/^      virtual ~SupportSequence() {$/;"	f	class:ALE::CartesianSieveDef::SupportSequence
~SupportSizeSection	include/sieve/Sections.hh	/^      virtual ~SupportSizeSection() {};$/;"	f	class:ALE::New::SupportSizeSection
~Topology	include/sieve/Topology.hh	/^    virtual ~Topology() {};$/;"	f	class:ALE::Topology
~TwoValueSequence	include/sieve/Sieve.hh	/^       virtual ~TwoValueSequence(){};$/;"	f	class:ALE::SieveDef::RecContainerTraits::TwoValueSequence
~UFCCellIntegral	include/sieve/UFCProblem.hh	/^      virtual ~UFCCellIntegral() {$/;"	f	class:ALE::Problem::UFCCellIntegral
~UFCDiscretization	include/sieve/UFCProblem.hh	/^      ~UFCDiscretization() {$/;"	f	class:ALE::Problem::UFCDiscretization
~UFCFormSubProblem	include/sieve/UFCProblem.hh	/^      ~UFCFormSubProblem(){};$/;"	f	class:ALE::Problem::UFCFormSubProblem
~UFCHook	include/sieve/UFCProblem.hh	/^      ~UFCHook() {$/;"	f	class:ALE::Problem::UFCHook
~UniformSection	include/sieve/Field.hh	/^    virtual ~UniformSection() {$/;"	f	class:ALE::UniformSection
~UpdateVecVisitor	include/sieve/ISieve.hh	/^      ~UpdateVecVisitor() {$/;"	f	class:ALE::ISieveVisitor::UpdateVecVisitor
~VTKViewer	include/petscdmmesh_viewers.hh	/^  virtual ~VTKViewer() {};$/;"	f	class:VTKViewer
~VTKXMLViewer	include/petscdmmesh_viewers.hh	/^  virtual ~VTKXMLViewer() {};$/;"	f	class:VTKXMLViewer
~ValueSequence	include/sieve/Sieve.hh	/^       virtual ~ValueSequence(){};$/;"	f	class:ALE::SieveDef::RecContainerTraits::ValueSequence
~Viewer	include/petscdmmesh_formats.hh	/^      virtual ~Viewer() {};$/;"	f	class:ALE::PCICE::Viewer
~Viewer	include/petscdmmesh_formats.hh	/^      virtual ~Viewer() {};$/;"	f	class:ALE::PFLOTRAN::Viewer
~Viewer	include/petscdmmesh_formats.hh	/^      virtual ~Viewer() {};$/;"	f	class:ALE::PyLith::Viewer
~XMLMesh	include/petscdmmesh_formats.hh	/^      virtual ~XMLMesh() {};$/;"	f	class:ALE::Dolfin::XMLMesh
~XMLObject	include/petscdmmesh_formats.hh	/^      virtual ~XMLObject() {};$/;"	f	class:ALE::Dolfin::XMLObject
~coneSequence	include/sieve/LabelSifter.hh	/^              virtual ~coneSequence() {};$/;"	f	struct:ALE::LabelSifter::__anon7::coneSequence
~coneSequence	include/sieve/Sifter.hh	/^              virtual ~coneSequence() {};$/;"	f	struct:ALE::ASifter::__anon2::coneSequence
~const_iterator	include/sieve/Field.hh	/^      ~const_iterator() {};$/;"	f	class:ALE::SetFromMap::const_iterator
~const_iterator	include/sieve/ISieve.hh	/^        virtual ~const_iterator() {};$/;"	f	class:ALE::IFSieveDef::Sequence::const_iterator
~const_iterator	include/sieve/ISieve.hh	/^      ~const_iterator() {};$/;"	f	class:ALE::Interval::const_iterator
~iterator	include/sieve/ALE_containers.hh	/^      virtual ~iterator() {};$/;"	f	class:ALE::IndexSequence::iterator
~iterator	include/sieve/CartesianSieve.hh	/^        virtual ~iterator() {$/;"	f	class:ALE::CartesianSieveDef::ConeSequence::iterator
~iterator	include/sieve/CartesianSieve.hh	/^        virtual ~iterator() {$/;"	f	class:ALE::CartesianSieveDef::SupportSequence::iterator
~iterator	include/sieve/CartesianSieve.hh	/^        virtual ~iterator() {};$/;"	f	class:ALE::CartesianSieveDef::PointSequence::iterator
~iterator	include/sieve/LabelSifter.hh	/^        virtual ~iterator() {};$/;"	f	class:ALE::NewSifterDef::IndexSequenceTraits::iterator
~iterator	include/sieve/Sifter.hh	/^        virtual ~iterator() {};$/;"	f	class:ALE::SifterDef::IndexSequenceTraits::iterator
~iterator_base	include/sieve/LabelSifter.hh	/^        virtual ~iterator_base() {};$/;"	f	class:ALE::NewSifterDef::IndexSequenceTraits::iterator_base
~iterator_base	include/sieve/Sifter.hh	/^        virtual ~iterator_base() {};$/;"	f	class:ALE::SifterDef::IndexSequenceTraits::iterator_base
~logged_allocator	include/sieve/ALE_mem.hh	/^    ~logged_allocator() {__alloc_finalize();};$/;"	f	class:ALE::logged_allocator
~malloc_allocator	include/sieve/ALE_mem.hh	/^    ~malloc_allocator() {ALE::MemoryLogger::restoreClassName(className);}$/;"	f	class:ALE::malloc_allocator
~malloc_allocator	include/sieve/ALE_mem.hh	/^    ~malloc_allocator() {}$/;"	f	class:ALE::malloc_allocator
~pair	include/sieve/ALE_containers.hh	/^    ~pair(){};$/;"	f	struct:ALE::pair
~polymorphic_allocator	include/sieve/ALE_mem.hh	/^    ~polymorphic_allocator() {};$/;"	f	class:ALE::polymorphic_allocator
~reverse_iterator	include/sieve/LabelSifter.hh	/^        virtual ~reverse_iterator() {};$/;"	f	class:ALE::NewSifterDef::ReversibleIndexSequenceTraits::reverse_iterator
~reverse_iterator	include/sieve/Sifter.hh	/^        virtual ~reverse_iterator() {};$/;"	f	class:ALE::SifterDef::ReversibleIndexSequenceTraits::reverse_iterator
~supportSequence	include/sieve/LabelSifter.hh	/^        virtual ~supportSequence() {};$/;"	f	struct:ALE::LabelSifter::__anon7::supportSequence
~supportSequence	include/sieve/Sifter.hh	/^        virtual ~supportSequence() {};$/;"	f	struct:ALE::ASifter::__anon2::supportSequence
