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IsoSpec
2.1.2
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This is the complete list of members for IsoSpec::FixedEnvelope, including all inherited members.
_confs (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | protected |
_confs_no (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | protected |
_masses (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | protected |
_probs (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | protected |
addConfILG(const IsoLayeredGenerator &generator) (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inline |
allDim (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | protected |
allDimSizeofInt (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | protected |
bin(double bin_width=1.0, double middle=0.0) (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | |
conf(size_t i) const (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inline |
confs() const (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inline |
confs_no() const (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inline |
current_size (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | protected |
empiric_average_mass() (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | |
empiric_stddev() (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inline |
empiric_variance() (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | |
FixedEnvelope() (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inline |
FixedEnvelope(const FixedEnvelope &other) (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | |
FixedEnvelope(FixedEnvelope &&other) (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | |
FixedEnvelope(double *masses, double *probs, size_t confs_no, bool masses_sorted=false, bool probs_sorted=false, double _total_prob=NAN) (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | |
FromThreshold(Iso &&iso, double threshold, bool absolute, bool tgetConfs=false) (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inlinestatic |
FromThreshold(const Iso &iso, double _threshold, bool _absolute, bool tgetConfs=false) (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inlinestatic |
FromTotalProb(Iso &&iso, double target_total_prob, bool optimize, bool tgetConfs=false) (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inlinestatic |
FromTotalProb(const Iso &iso, double _target_total_prob, bool _optimize, bool tgetConfs=false) (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inlinestatic |
get_total_prob() (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | |
getAllDim() const (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inline |
LinearCombination(const std::vector< const FixedEnvelope * > &spectra, const std::vector< double > &intensities) (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | static |
LinearCombination(const FixedEnvelope *const *spectra, const double *intensities, size_t size) (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | static |
mass(size_t i) const (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inline |
masses() const (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inline |
normalize() (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | |
operator*(const FixedEnvelope &other) const (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | |
operator+(const FixedEnvelope &other) const (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | |
OrientedWassersteinDistance(FixedEnvelope &other) (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | |
prob(size_t i) const (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inline |
probs() const (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inline |
reallocate_memory(size_t new_size) (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | protected |
release_confs() (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inline |
release_masses() (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inline |
release_probs() (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inline |
scale(double factor) (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | |
slow_reallocate_memory(size_t new_size) (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | protected |
sort_by_mass() (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | |
sort_by_prob() (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | |
sorted_by_mass (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | protected |
sorted_by_prob (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | protected |
store_conf(const T &generator) (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inlineprotected |
store_conf(double _mass, double _prob) (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inlineprotected |
swap(size_t idx1, size_t idx2, ISOSPEC_MAYBE_UNUSED int *conf_swapspace) (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inlineprotected |
tconfs (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | protected |
threshold_init(Iso &&iso, double threshold, bool absolute) (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | |
tmasses (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | protected |
total_prob (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | protected |
total_prob_init(Iso &&iso, double target_prob, bool trim) (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | |
tprobs (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | protected |
WassersteinDistance(FixedEnvelope &other) (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | |
~FixedEnvelope() (defined in IsoSpec::FixedEnvelope) | IsoSpec::FixedEnvelope | inlinevirtual |